Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCATCTTCCTCTCCGCCGCCGTACCAACAACAATCATTTTCAGATTACCCGGAACCTCCGATGGGAATCCCCCTCCTCTTACCCGCACCAGCCCAACCAGCTCATACCTCTCGCCGCCTTCCTCCGCCGTGCTGGACTCCTGATGAAACCGCCGGTCTAATTGACGCTTACCGTGACAAATGGTACTCTCTCCGCCGTGGGAACCTCCGCGCCGCTCACTGGCAAGATGTTGCTGATAACGTCCACCGCTTTTGCCCTCACGTTTCTCCCCCGAAAACCGCCGTTCAATGTCGTCATAAGATGGAGAAGCTTCGGAAACGTTACCGCGCTGAGCTGAATCGGGCTAAGTCTATCCCTCACCATAAGTTCGCCTCTTCCTGGGTTTACTTCTCGAAGATGGATTTCATGGAAAAGGGCGATTCCGCTCTTCCAGCTGGGGGGAGAGGCGGCGGCGGTGGTGGTGGTGGTGCTGGTGGCAGAGTAGGCGGTGGTGGTAAGGCTGCTTCATCTATTTCTCCTGTTGTTGTTGCTGATGAGTTTATGAATGATGGATTTGGTGATGATGATGATGATGATAATAATAATGATAATAACGATTTAGATGACGATGATGAGGATTATAACGGTGGATCTTTCCGAAAGGAAGCGAAGGAATTTCAGAGGAATGGGTTGAGGATTCGTATCGCCGGGAATTCTAGGAAGAATTATGGAGGATTCGATGAAATCCCTAACCCTAAATTTGGATTAAAGTCATCAACATCCTCAAGGTACAATGAATTTGGGTCACCTCCACCTCAATTTGACGATGGAGTGAGGTATTCAACGAGATTTGCAAGGAATGGGAGCAATGGTGGGGTTGGATCATCATCTGGGATGGGGAAGGGAAAAGGGGTGAATATGAATATGAATATGAATATGAATACGATGAAGAAGAAGAGGAGTGCGTTGAACAGAGATGGGGGAAGAAAAGAGAGAGGAGATAATGTAGCAATGGCAATGGTGGAAGCCATAAGAGTATTGGGAGAAGGGTATGTGAGAACAGAGATGACAAAGATAGAGATGATGAGAGAAGCAGAGAAGTCAAGGATGGAAACCGAGTTGAAGCGAACTCAGATGGTTCTTGAGTATCACCAAAACATTGTTGAAACTTTTGTTAGAGGATGGTCTAATCACAAGAACAATGATAGTGATGCCTAA ATGGCCTCATCTTCCTCTCCGCCGCCGTACCAACAACAATCATTTTCAGATTACCCGGAACCTCCGATGGGAATCCCCCTCCTCTTACCCGCACCAGCCCAACCAGCTCATACCTCTCGCCGCCTTCCTCCGCCGTGCTGGACTCCTGATGAAACCGCCGGTCTAATTGACGCTTACCGTGACAAATGGTACTCTCTCCGCCGTGGGAACCTCCGCGCCGCTCACTGGCAAGATGTTGCTGATAACGTCCACCGCTTTTGCCCTCACGTTTCTCCCCCGAAAACCGCCGTTCAATGTCGTCATAAGATGGAGAAGCTTCGGAAACGTTACCGCGCTGAGCTGAATCGGGCTAAGTCTATCCCTCACCATAAGTTCGCCTCTTCCTGGGTTTACTTCTCGAAGATGGATTTCATGGAAAAGGGCGATTCCGCTCTTCCAGCTGGGGGGAGAGGCGGCGGCGGTGGTGGTGGTGGTGCTGGTGGCAGAGTAGGCGGTGGTGGTAAGGCTGCTTCATCTATTTCTCCTGTTGTTGTTGCTGATGAGTTTATGAATGATGGATTTGGTGATGATGATGATGATGATAATAATAATGATAATAACGATTTAGATGACGATGATGAGGATTATAACGGTGGATCTTTCCGAAAGGAAGCGAAGGAATTTCAGAGGAATGGGTTGAGGATTCGTATCGCCGGGAATTCTAGGAAGAATTATGGAGGATTCGATGAAATCCCTAACCCTAAATTTGGATTAAAGTCATCAACATCCTCAAGGTACAATGAATTTGGGTCACCTCCACCTCAATTTGACGATGGAGTGAGGTATTCAACGAGATTTGCAAGGAATGGGAGCAATGGTGGGGTTGGATCATCATCTGGGATGGGGAAGGGAAAAGGGGTGAATATGAATATGAATATGAATATGAATACGATGAAGAAGAAGAGGAGTGCGTTGAACAGAGATGGGGGAAGAAAAGAGAGAGGAGATAATGTAGCAATGGCAATGGTGGAAGCCATAAGAGTATTGGGAGAAGGGTATGTGAGAACAGAGATGACAAAGATAGAGATGATGAGAGAAGCAGAGAAGTCAAGGATGGAAACCGAGTTGAAGCGAACTCAGATGGTTCTTGAGTATCACCAAAACATTGTTGAAACTTTTGTTAGAGGATGGTCTAATCACAAGAACAATGATAGTGATGCCTAA ATGGCCTCATCTTCCTCTCCGCCGCCGTACCAACAACAATCATTTTCAGATTACCCGGAACCTCCGATGGGAATCCCCCTCCTCTTACCCGCACCAGCCCAACCAGCTCATACCTCTCGCCGCCTTCCTCCGCCGTGCTGGACTCCTGATGAAACCGCCGGTCTAATTGACGCTTACCGTGACAAATGGTACTCTCTCCGCCGTGGGAACCTCCGCGCCGCTCACTGGCAAGATGTTGCTGATAACGTCCACCGCTTTTGCCCTCACGTTTCTCCCCCGAAAACCGCCGTTCAATGTCGTCATAAGATGGAGAAGCTTCGGAAACGTTACCGCGCTGAGCTGAATCGGGCTAAGTCTATCCCTCACCATAAGTTCGCCTCTTCCTGGGTTTACTTCTCGAAGATGGATTTCATGGAAAAGGGCGATTCCGCTCTTCCAGCTGGGGGGAGAGGCGGCGGCGGTGGTGGTGGTGGTGCTGGTGGCAGAGTAGGCGGTGGTGGTAAGGCTGCTTCATCTATTTCTCCTGTTGTTGTTGCTGATGAGTTTATGAATGATGGATTTGGTGATGATGATGATGATGATAATAATAATGATAATAACGATTTAGATGACGATGATGAGGATTATAACGGTGGATCTTTCCGAAAGGAAGCGAAGGAATTTCAGAGGAATGGGTTGAGGATTCGTATCGCCGGGAATTCTAGGAAGAATTATGGAGGATTCGATGAAATCCCTAACCCTAAATTTGGATTAAAGTCATCAACATCCTCAAGGTACAATGAATTTGGGTCACCTCCACCTCAATTTGACGATGGAGTGAGGTATTCAACGAGATTTGCAAGGAATGGGAGCAATGGTGGGGTTGGATCATCATCTGGGATGGGGAAGGGAAAAGGGGTGAATATGAATATGAATATGAATATGAATACGATGAAGAAGAAGAGGAGTGCGTTGAACAGAGATGGGGGAAGAAAAGAGAGAGGAGATAATGTAGCAATGGCAATGGTGGAAGCCATAAGAGTATTGGGAGAAGGGTATGTGAGAACAGAGATGACAAAGATAGAGATGATGAGAGAAGCAGAGAAGTCAAGGATGGAAACCGAGTTGAAGCGAACTCAGATGGTTCTTGAGTATCACCAAAACATTGTTGAAACTTTTGTTAGAGGATGGTCTAATCACAAGAACAATGATAGTGATGCCTAA MASSSSPPPYQQQSFSDYPEPPMGIPLLLPAPAQPAHTSRRLPPPCWTPDETAGLIDAYRDKWYSLRRGNLRAAHWQDVADNVHRFCPHVSPPKTAVQCRHKMEKLRKRYRAELNRAKSIPHHKFASSWVYFSKMDFMEKGDSALPAGGRGGGGGGGGAGGRVGGGGKAASSISPVVVADEFMNDGFGDDDDDDNNNDNNDLDDDDEDYNGGSFRKEAKEFQRNGLRIRIAGNSRKNYGGFDEIPNPKFGLKSSTSSRYNEFGSPPPQFDDGVRYSTRFARNGSNGGVGSSSGMGKGKGVNMNMNMNMNTMKKKRSALNRDGGRKERGDNVAMAMVEAIRVLGEGYVRTEMTKIEMMREAEKSRMETELKRTQMVLEYHQNIVETFVRGWSNHKNNDSDA Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Spo11508.1 vs. NCBI nr
Match: gi|902240050|gb|KNA25854.1| (hypothetical protein SOVF_002790 [Spinacia oleracea]) HSP 1 Score: 778.9 bits (2010), Expect = 4.400e-222 Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 1
BLAST of Spo11508.1 vs. NCBI nr
Match: gi|731358848|ref|XP_010690969.1| (PREDICTED: uncharacterized protein LOC104904423 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 367.1 bits (941), Expect = 4.000e-98 Identity = 230/427 (53.86%), Postives = 281/427 (65.81%), Query Frame = 1
BLAST of Spo11508.1 vs. NCBI nr
Match: gi|470143154|ref|XP_004307247.1| (PREDICTED: trihelix transcription factor ASIL2 [Fragaria vesca subsp. vesca]) HSP 1 Score: 228.8 bits (582), Expect = 1.700e-56 Identity = 167/409 (40.83%), Postives = 210/409 (51.34%), Query Frame = 1
BLAST of Spo11508.1 vs. NCBI nr
Match: gi|657949557|ref|XP_008343762.1| (PREDICTED: uncharacterized protein LOC103406550 [Malus domestica]) HSP 1 Score: 228.4 bits (581), Expect = 2.200e-56 Identity = 172/402 (42.79%), Postives = 218/402 (54.23%), Query Frame = 1
BLAST of Spo11508.1 vs. NCBI nr
Match: gi|1012130008|ref|XP_015964711.1| (PREDICTED: trihelix transcription factor ASIL2 [Arachis duranensis]) HSP 1 Score: 223.0 bits (567), Expect = 9.200e-55 Identity = 162/402 (40.30%), Postives = 203/402 (50.50%), Query Frame = 1
BLAST of Spo11508.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S3N9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_002790 PE=4 SV=1) HSP 1 Score: 778.9 bits (2010), Expect = 3.000e-222 Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 1
BLAST of Spo11508.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EBX5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g218180 PE=4 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 2.800e-98 Identity = 230/427 (53.86%), Postives = 281/427 (65.81%), Query Frame = 1
BLAST of Spo11508.1 vs. UniProtKB/TrEMBL
Match: W9R598_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008033 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 4.200e-54 Identity = 164/418 (39.23%), Postives = 207/418 (49.52%), Query Frame = 1
BLAST of Spo11508.1 vs. UniProtKB/TrEMBL
Match: A0A061DWU0_THECC (Transcription factor, putative OS=Theobroma cacao GN=TCM_005773 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 4.200e-54 Identity = 168/419 (40.10%), Postives = 215/419 (51.31%), Query Frame = 1
BLAST of Spo11508.1 vs. UniProtKB/TrEMBL
Match: B9SKE7_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0658460 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.600e-50 Identity = 157/396 (39.65%), Postives = 197/396 (49.75%), Query Frame = 1
BLAST of Spo11508.1 vs. ExPASy Swiss-Prot
Match: ASIL2_ARATH (Trihelix transcription factor ASIL2 OS=Arabidopsis thaliana GN=ASIL2 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 2.200e-8 Identity = 50/165 (30.30%), Postives = 80/165 (48.48%), Query Frame = 1
BLAST of Spo11508.1 vs. TAIR (Arabidopsis)
Match: AT2G44730.1 (Alcohol dehydrogenase transcription factor Myb/SANT-like family protein) HSP 1 Score: 139.4 bits (350), Expect = 4.700e-33 Identity = 88/193 (45.60%), Postives = 108/193 (55.96%), Query Frame = 1
BLAST of Spo11508.1 vs. TAIR (Arabidopsis)
Match: AT3G54390.1 (sequence-specific DNA binding transcription factors) HSP 1 Score: 71.6 bits (174), Expect = 1.200e-12 Identity = 37/118 (31.36%), Postives = 57/118 (48.31%), Query Frame = 1
BLAST of Spo11508.1 vs. TAIR (Arabidopsis)
Match: AT3G58630.1 (sequence-specific DNA binding transcription factors) HSP 1 Score: 67.8 bits (164), Expect = 1.800e-11 Identity = 37/111 (33.33%), Postives = 58/111 (52.25%), Query Frame = 1
BLAST of Spo11508.1 vs. TAIR (Arabidopsis)
Match: AT3G24860.1 (Homeodomain-like superfamily protein) HSP 1 Score: 66.6 bits (161), Expect = 3.900e-11 Identity = 63/238 (26.47%), Postives = 112/238 (47.06%), Query Frame = 1
BLAST of Spo11508.1 vs. TAIR (Arabidopsis)
Match: AT5G05550.2 (sequence-specific DNA binding transcription factors) HSP 1 Score: 64.7 bits (156), Expect = 1.500e-10 Identity = 31/92 (33.70%), Postives = 58/92 (63.04%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo11508.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo11508.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo11508.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo11508.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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