Spo10503.1 (mRNA) | SpinachBase

Overview


Name	Spo10503.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Co-chaperone, HscB-like protein
Location	chr6 : 26872228 .. 26884215 (+)
Sequence length	1573

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTTGCCAAGTTCACAAGTCACAAGCTCACAAGTGAAATAGCCAATACGTAGTACCACCGTGAAACCGTCCACCTATAACTTTCTTTTACCGGCGCTGCAAAATACTCCGATGAACACCATGAGACTACCATGGCGTCGATTCTCAGCCCTCCTCCGCCGAAATTTGAAGCCCATTTTCTCTCTTTCCTCTCCCGCCCTTCATTCCCATACTCGACCTCTCTCTTCTCTCTCCTCTCCCGCACTCCCTCCCCATTCCAATTTTCCTGCAAATTTTCTCCACAGCTTTCCCAATCAATCATCCAAGCTTTTTCGCTTCGAATCATCATCATCAAGCTCCGAATTTCGAAGATGCTGGAATTGCAACTCGTCCCCAACAACCTCACAACTCTTCCTCGTTTGCGATTCTTGCCGTTGCATTCAACCCGTTGATCGCTCCGTTGATTACTTTCGGATTTTTGGACTGTAAGTTTTCTCTTTTATCCCTTGATTACGCCTCTGGTAAATGCATAGATTATCGTCAGAGTCAGATTAATGCTTTCAATGTTAAATTCAATGTTAAATTGTTTTGGTTGCAATAATTAGTAATTTAGCTCATAGTTGCGAGAAATTCTAGTTTGTTCTAGGGATTGCAAATTTGCAATGAATTTATTTCATAGTTGAGGTTATTATCACAGCATAATTCTATTATTTGTCCTTATGAGATAGTGTTTGATTGCCATTTTTTGAGTTTATGACTGCTCATGTTATGTGTACGGATAGACGCCATGTCGCATGTTCCAGGGATAGAAATAACTCTGTTTCATGTTATAGGGATTGCAATAACTCGGTTCCGTTGGTATGAAAATATTTGTGGGTAGGATTAGTTTGAAGAGGAAGACAGTTACTCGAGGAAGGAAGTTAGAAATTACATATAAGAGAGGTGATCAGTGAGAGGAAAAAGTAGCAGAATTTTTTTAAGAGTGTCCAACTGTCCATCCACTCGAATTTGTGGGATTCGAGCCCCAATTTGATGATTTAATCGCATCAAAGTACAATTGACTGTCATTTTTTCCCTACTTCTCCTCTTCTCCCTTATTCCTATATACATTTCTGTTATCCGATCTACTACAGTCATTATCATTATCATTACCCCATTGCCTCAAAGAGGCTCCCGCAAGAAGCTAGGTAGGGGTGTCGGACGTACGCAACTTTACCCCTGCAATTGCAGAGAGGTTGTTTCCAATTGACCCAAAAGCGATAACGGGATGATAACGGGACGACCATCTTCTACTTCATGGAAAGGAAGTGAAGAGGTTTTAAGAGCCATTTTGATTTAGTCCATTACATCCCACAGCCAAAAGAACAAATGAATCTTTGGCTCCATTGGAAATGGACATATATCCGATCTACTACAGTATCACATCATAATTCTATAATTTCTCCTTATTAGAGTGTATTCACCGTCTTTTGAATCTATGGTTGTTCGTGTTATGTGTATTTCTTGTTTTTTACTTCATCAAGTTTGACCTATTTTAGGTGTTTCAATGAAATATGATGTGATTTAGTAAACTCTTCAGCCCCTTGGTCTTCAGAACTTGTAGCTAGAATGTATAGTTGTAATACTTAGCAATGCTAAATGAGAATGCCAAAAGCCATTAAGTTTTGCTGTTTAAAATGTTGCAGGGAGCAAAAATACGATATCAAGGAGAGTAATTTAGAGGGCGTGTATAAAGACTGGCAGAAGAAACTGCATCCTGATCTAGTTCATTCAAAGTCTGAGGTTTGTTTTATAAGTCTTAGAATGATTTGAAACACTTCTCTTCCTTGTAATTGTAAGTTGTCTAATTATTGTCATATTTAATTAGAGTGAAAGGGAGTATGCTGCTGAGCAATCATCTCGAGTCATTGATGCTTACAGGACACTAAAAAATTCCTTATCGAGGGCTATATACCTTGTGAGTACAACCATATCTATGCATTTTTTGTTTCCTTGAAGATAATTAGGCTTCTATATTGGCTTCTGTGATTTTGTATGCTGCATGGACCACATTCATGTATGCTACATGTATATTATCTGTGTGATGTTTAGTTATACCAAATTTAATCCAATTCTGCTGGTGAAACTCCTATTTAGGGCAGGTCAGGAGATTAGTTGTATGCAACCTAACACAAACAATTGTACATAGGCTTTATTAGCCTTAGCCCTTATGGCCTTTGCCCAAATATAAGTGCAAAGATGTTGTTTCTGGTAGAGCCTTGATTGGATGACCACTTCATCGTATATAAACAAAAACACATCAGTGAGACATTTGATAGCAGGGTCTGTGGTAAACCAGTATTTGGTATCTTATCAGTTTATCAGTTATCTTTTCCGGTGCAGAATAAATGTCCCCGCTTCAGAGATTTTCTTTAGTAATGAGCATTAGAAGAATTATGTCATGGATCTTGACGAACAAAGTGTTATGGAATTTTATTGATTAGGCTCATAGTTGAAAGTGTAAGATCCATTTTTTGGCGGCGAGGAAATATTAATTAAAATATGACAAGATGAAAATTAACTTAGTTTGGGACTTTGGGTCTGAAGCAATACAAATTGAACTATGGCAAGTTGACATAATTATTTTGATTGCATCATCATCCGCTTACAGATTGCGTGCATGCTATTAAGGCCTATATGTGATTATTTGGGGATAAGAATTTGCTTCAGAGAGAATTCTATGACTGTTATAAATCTTATGATATACTGTATTCGCGTATTGGTAGAGAATATTATCTACAAGTCTTTAAGCAGAGCAGTCGATGATCTTGCTGTTGTGAATTTTTTACTGACTCTAGTTTTTCTAACCGTCATTGCTGGAAGTTTAAGCTGAGGAATTCTTTTATTTATTCCTCAAGTTTTGGGAAGAATTATTTTCTTACATCAACGATATCTCTTTCTTAGGGTAAGAGAAGAAAAGAAAATATAAAAAAACCCTACAAGGAAGAATATATACAACTTAAAATGGAAAGTCTTATCTCTATTAACAGAAGAACCCCACTTGACTTCATAACGTCTAGTTGTAACTTGTATGTGCTCAAACCCCCAACTCACTGAGTATGTAGTAATGTTACTTTCCCTGAAGAGTCTTAGTGAACAATCTTCCAACTCTGCAGATGTAGGTACATTTGAAGTTGTCTAGGGACGTGATGACAATCCAATTGTATATGCTTTGTTATTTTAGAAATTACAAGATTTTGAGCTATGTATATGGCTACTTGGCTATGACACTTTAAAGGAATAGGAAGGGTAAAAGATATTGTTAGTTCATCTTAGAATCTGGATAGCCAAGCTTATTATGTGGTTACTCTTCTCATGCTTCAATTTCCAGCTTTGCTGAAGAAGGGCAACCGTGGTTTGCCTTGCTTTCGAATTTCTTTGGAATTGGACTCGCAAAAATTAATGTAATCGCTAACTTATCGTCTAGAAGCAAGAACAAGTTGCTATATCAGAATTGCTAATAGCTTTCTGCTCAAAAGAGCTAGAACTTTTCAAGAGGAAACCTTATGATGGATTATGTTTAAGGTATCTCAAAACCTAAGTGGAAGCCTTCATGTGAGGTTCTCTAGAAGAGCTGAGAATTGACTGAAGGACTATAAAACTGAGATCTGGCCTTGTGTTAGTCAAATAGTTAAGCTGGATCACTAAACAGAGTACCCTCGTTTGCGTGGGAGATAAGTGGTCACAATCAAATTCTGTAATTTGATCCAATGCAAACTTCCTTTTTGTCATGATGATCCCTTGCCATTTATGAAGGAATATATTCCCTTGAAGAAATGAAACTACCGAGGTCGGTCTTTAAATCTTAATCGATCATCATAAAAAGCTTTAAATCTGTTTTAAATTCAGAAGCATGATTAGTTGATTACAGCTACTGAAATATCAACAACATATACTACATGGAGTTTAGTCATTTTGTGAGTTTTGATAGCCCTAAGATTTGAGAGCACTAGACAGCTCAGTATACAACTGCCTTGTCCTGGTTTTGAGCCTAACTGAAGGAGAAGGCACAAAAAGACCCAAATGAGGTTTCATTTGTATTTCTTCAATCTCTTTGATCATTGTTTCTTATCACTCACTCACCCAAGGTAAAGAACAACTTCTTTGTAACCAGAAGGATTATGAACATTGGTGGATTAGGCAAATTTGTAAAGCTGGGATCATCTGCTGGCTGAAAGATTGTGAAAAGAGTAAGACACAGAATAAGGATAAGTGTCACTGTTGCATATGTAGTCTCGCATATATGCAGGAGGCTTTCAGATTCTAGTAACCTTATGGATTCCGTTGACTGCAAGGTAGTGGAATGTGCGGTCGAGTAGGTGGAGAGAAGGAAAAAGAGAAGGGGCCGGGGGAATGGATACTCAAGATAAGTGAAGGGAAGGAGAAATTAGGACACAGATTTGATTGAGATTAAGCTTACGTAAGACTAAAGAGTGATTTTATGAAAGTCTGCATCCTTCAAAAAGAAGTCCGATAAGTTTGAAATTTGTGTAGGTTTTTATTTTCATATGCATGACCAAGAAATAACATGCTTGAACTGTAGAAAAAATTTGTCATATGGTGTATGGGCTAGAGAAACAAATCTAAGGTAGCCAAAGGTTTTTAGTGAGAACAAGAAGGCTCTTAGTATCAAACAACACTTCAAAGTGTGTGTTTCTTTAGACAGGTAACCGTTGTAATACAATCTCCCCAAAGTTCATAAATTTCCTTTCAACTACCCGATTTTGTTGAGATCTCTCCATGGTCAACTACTTTCATGAAGAATGACTTTATCAGAGAAAAATGTACGCCCTTATTTATAGATCCCAAGATTCCCAACTTAAGGGCTTGTCAGATCTCACCTCTGAAATTGGATATTATTCCACCGTAGAAATGAAAGCTTTTTGGTACTAAGTTGGTGAGTCAAGAATCGAAATGCTTCAGCTGTTTTAATCAACTATTGTGATTTGATTCGGTTCCGTATTTTTGGACCATATAATCGTAAGTTTTCAAGATTCATATCGCGATTTTAACAACCACGATTTGAGCCTTTCAGCTTAGGTCATAGTCCTGGACGCCCCAGTAGAACCATTAGAGAAGTTGTATGGTAATGCTTTGACAAAGGAGAAATAGTACGGAAAAGCGTCAAGTCATGACATATATTTTGCTATTGCTTGTGTCTACACTATGGAACAAAAAGGAAATTGGTATGCACAAAAGAACACAAAAGGTCAAATTTATCTAATACGTGGGAAAGACTACTGCCTAATTGATTGTTAGTGTAGCTGGTTTGAGTGTGACAGAACCCATCTCAGTATAGTTGACATTTCGAGATTGAATCCTAGCAGCTATAGTTGTATACATAGTAACACTCTCCTTGTGAGTTGTGAGATTCACCTTGTGCCACTTTAGCAATATTTCTTCTTTAACAGACTTGAAATTTCACAAAAAGCCCTTCAACTTATAGCATTTGTCACTAGGATGATCCAATTACTTGCAGTACCCACAAGTAGCCTAGTCGATCGACAATCCGACATTGTGAATAAATTACCAAATCAAGAAAATACCCTATGTAATACTTGGAAGAAAAGAAAACAAAGTCTTCAAGATGTTTTTATTCAAAATAATGGTGTGTACCACAAGAAATTTAGAAATGAATGAATGAAATCTCAAAACAAAACTTTGTGTTTCTTTATGAAATAACAAAGGTAAAATGATATGAGATTAAGGAAAAGTTGAGAAGAAATTTTAAAGTTCAAAATATTCAACAATGGAAACGTGAACTGGGATTTCAGAAGACGAACAAGGAAATTAATAGAGATCAAATAATAATTTCCTGGTCTGTTACCATAAATACAGTGCTCAGTTGCTCAAATTGTTTTTTTCTAATCGTCACCACCGGAAATTTCAACTCACCGATTATTATTTTCTTACATCAAAACAGTAACTTTTATTGTGGTAAAGAAAAGTTACAAGGAATTATTTATACAAAACATAGAATTTTAGCCTGACAAGCTTGTAACTGAAGCTTCCGACTGCTATATATACTTGGTATTACATAATTAGTACAGGTTGCACCTTTAACAAAATAAGCTCGCTTACTTGGTAACCTTTTGTTGTATATGCTCAACATGTTTTAACACCTGCTGACTACAATTGCACAATATGGATTGTGATACAACTATGTTTTGATGGATTATACTGCATAGAACTTTTATGGCCATCTCTGAGATAAGTAAAATATTAGAAAACCGGAGCAAGTTCGTAGAAGTGAAAACCAAGCAACAAACCAGCATAGTATCACATAAAAGTAACCATGTAACAGTACACCCCCTTGTGTGAATTAAACCTGCTATTGTCTTTTTTTCATTTAAAATATGGACAATTTCTTTCAAGATATATACCAACAAATGCTGTTTCCACTGACATAAAACTAGATAATCCACAAGTCAAACCATTTAAGTCATAAAATTCTGATGCAGTCAGGTAGGGCACACGTTTCTCTTTCTCTTCCCTTAGCCAACACATAAATTGACCTCTTGAGCAGCGGACAGCTTTCTATGTCTGGAAATCGTCCCTTTGGTCACTGCCGAGTGTTACCTTCACTTTTCAAGCCTGGATTTACTTTAGCTCAATCGATTTGGGTATATCTCTCCTGTTTCTAGATTTCGAGACGTGGCCATGTATCTTGTGAGGGGGAGGTCTTATCTCTTAGTTATCACAGGATTGTTGTTCTGTGATGCTTGCGAGGTTTTAAGGTGGACCTTTTCTTCTTTCAGTTTGAGGAATAGGATAATTTTGAAACCCTGGTATTTCATTATCCACAGCATATACTCTATAGTCCGTAGTTTACAAAGTCAGTTTTCTTGGATGAATGTATTGAGCTAATGAGCTGTTCAAGAAAGGAACTTTTCAATTTGCTGTGGCTGCTCAACCTTTATTGTTTGCTTTATCAAGAAATGAGGATGAGAAGTCACTGCTTTGGGGATTAGTAGAGACTGAGCAGAATGAACCAGATTTAAATCTATTTGATCTTGCTTAATTAAACATCAGAGGTTGATCCTTATAATAAAGTAATGGAGATAAAAGTTAGGGAGGCATAAATGATAAATCCGAATAAAAAAAAAGGAGGGGGTGTTAGGTTGTTATAGTGGTATGGATTTGGAATCAGGAATGAAATCATGGTGGTATGGGGTTGGAACTTAGGGGTCGTATGGTTCATTAAATTGGAATGGAACCTCATACCGTGGGGGAATGGATTCAAATTCCCATACCAGTTTGACGTTGTTTGGTTTATTCGTGGAATGGATTCTCTATCCCATTCATAATGTTTGGTTTACTTTTGAAGTGAAATACTAAATCCAAACATACCAAATTTAATTTGTAACTGAATCAAAATTAATACTCCCTCTGTCCCAGATTAGTTATTACACTTTCCTTTTTCGTCCGTCCCAGATTAGTTGTTACACTTCTAAATTAGGAATGACCCCACAATTATTATATTGTCTCTCTCTTTTAAAATTTTTTTTGTCCCCACACCCTCTCTCATTCAATTAAAAAAATACCCCACTAACTCCTATCACATCTACTTTTTCAATAAAATAACAATTGATAATCAAACAACCACTTATCACCTAAAACTCTATGCAAAGGTAAATGTAACAACTAATCTGGGACGGAGGGAGTATAATTTGTATAAGTATACCTCAAAAATATATATATATACAAAAGCAAAACTTTTTTTTAAAATAAAAATAAAATAAATTCTCGAAAAGAAAAGAAAAAACTGGAATGCCAGAGTAATGGTGTATAACAATGGAAAAAGGAAAAACTCATGATTGCAAATTCAACTACAGGCCTAGGAAAATGGATAATATCAGAGTTAGAATCGCAAATTCGTTCTCATTTTACTTCTCCGATAACAATTCAATTACCACAACCTAAATCGAATATAGTCGATACATTCCATCGATCCAAAATAACAACCATCACTTACGTCGCCGGTCAAGTCGCTGGAGAAGGAGAAAGATATGAGTAGTTACGAACTTACGGTGGTCAGGTCTAAAGTGGAGGGGAGCCGTCAACCTTGTTGTATTGATTTTTTTTACTTTTTTTAGTGTTAGGGTTTGTATTTGGGGTGGAATGGATTATGAATCTTAGGGGGAGAGGTGGGTATGAGATTTTAGTGGGATGGAATGGAGTTAGAACCCTCTTGGCATGGGATTCCATACCAAAATGTCTCAACCAAACAATAATAAAGATGGAATGGATTCTAACTCCATTCCAACCCATTCCAAGATGCCCAACCAAACACCCCCTTAATTCTTAATATCATGTGTTTGGAATATATTTTTTTTCTTTTATTTGATACCTAAGGTTCTTATATGATCCATACACACCTCCCCCTTGGGTTTCTAAATTCCACACCTTGTGGGTTTGATGTATAGGTTTAGAATTAAAATCTTCTTAAACAAACACTAGGTATGAGTTTTACCCATTCCAAACCCGTAACTCATACCAAAATCCGCGAACCAAAAGTCCCCTAGAAGTTTTGGGAACTTCTCTGTGTAGGACCCGAATATCGGGTTCCTAATTATCGGGTTAGGTTTTGGAAGTTAGTTAAGCGCGATAATTTTCTGTTGCAAAAACCTTTTCCACATAACCTAAATATCAGGTTTCTAATTGATGCAGCCAGGCAATTTCACTTGGCTTGCCCCTGCTTTGTATTAGATTCTTATAGTGGAAATGAGGTAATCTTCAATTGTACCAACCAAAATTTTATAATGAAGGCTAAAGGACTGGGAGCATTGGTGTCCTGTGTAGAGATGAATATAGAAGAGTTTGTGGAAGATTGGCTCTGTTTTGGTGATATCTTTACGGACATGCTTTATTCTACAGGCACATTCTAGAGCCTCTGAAAGATTTTTCACTCTTGGTACTAATGTATTTCATACCTATATAGGATAATCCATTGAGGAAATGGTTGTGTGCTCCTACATTTTTGGGTCTCTGTTAGAAAAAATACAGCCCATTCCCCTTAGAATTTTTATCATAACGGTAACGTTACTTCAAATCAAATGCCACTTCCTCTGGACATTCTGCAGTGATCTACTGCCATATTGTCTTTCAGATTCTTATACTCCGTATAAGAGTCTAAGAGGTGCCTATAAGCTGTTCAGTAATTTGTATGACTGCTCTTAAATTTCCTGCATGGATGAATGACCACACCAAGGGATAGTGGTGTCTAGCACATGCGTGATTGAACTTGACTTTTAATATACTTATCTCGTATAAACAAACTGTCCGAGGTTAAGATTAAAAAATATATTAAATAAAATAAAATAAAAACACATCAATGTTTGTAATATTGTACTTATGACTATCTTGGACTTGCTCTGAAATCGTTTTTGTTCCTTGAATGTTAGATGAGATGTATCTCTTGTTCACTGTTTACAAGTTACTTCAGGATGTTGTTTGGCATCTTGTTCCTATATCTTTTTCATCATTCATCAGATTTCCATTCGAGACAATTAATGTCTTCATTTTAACATGGCAGATGAAGCTACAGGGTGTACATGTTGATGAAGAGCAGACTGTTTCAGATCCAGAATTACTAGCTGAGGTTAGATAGTTGGACATTTTGTTGTATCACATTGTCGTTGTAACATGCCTCTAGGGTCATAAGGTCATTTTTATGGTTAAAAAGATGTTGGTCAACATGCCCAGTTCATTGTAAATTTGTCACTTTGGACATCTACCATGGCAAAACAGTTTTATCTGGGGTTCATTGGATGTTTACACTCATGTAAGTTGTGAACATTAGATCAGAAAGAACTATTTGAGAATCTAAATATTTTTTGCAGGCAAATTTATCCCTTGAACTAAATTTAGAAGCCTGACCATGGATGTTAAAACAATGGGGATTTTTTATATTTATCAGAGAAGATAGATAAGCGAGCATGATGTCGTTGGTTTTAGGTCATGTGATATTTCTGTAGAAGTTTAATAGATTTAAAGAAAACTGAAGGGCAAAGTCTGTTGATAATGTCAGCTAATAATATTGTTGAACATTTGAGCCTGGCTAATTGTTTTCATTGTATAATTTGCACCATGATTCAAAGTTGTATATAAATGTTACCGGTTTACCGTATGTAATCTCTATGCTGAAACATTTATTGGAAACTCCATATGGTTTAGTCCTTTCTATTCTGTACAAGACTTTTTGCAGAAAAAAAAAAATCAGTGGTATACGAAAGAAGAAAATAATGTTCACTGAGTTTTCAAGGTCTTGCAAATCAAACATCACTTATCCTCATTATCCTTCCCCAATGCACCCTCTATGCCCATCACAATCTTAGATAGCCACTGAAGATCAATACCTCGGCATAGAGGGGTGCAATATAAAAGAAAAGAATTTCGTTTGCAAGAAGTAATGATGTGGACTGGTAAATTACCAACAAAAACATAGTGGACTAGTCTTCATATTTCCCTTTCAATCTTTTTCATGGTATGGAACTCTGCAGCAGAATCAAAGCTATGGTAGGAGAAGGTGACTCGCTTAGATAGCTGACTCCTATTCAACAGAAAAGAATAACCAAACCAACCCAGCTAGCTGGTCCATCTCATGAAAGATTTCAGGAAAAAGCTATTCTATTGATGGAATCAATAGGTTATCTGACAACTTCTTTATGGTAGTTGGTGAAGGATATAGTTGTTGAAGAGCTTTAGTCAACGAAAATTAGCTACTTTTAACACGAACTTATAGCTATTGGGGAATAGAAACATACAGAGAAAATTTCAAAGACACTGTGTTAATCGTGTTTAGTACCCAAGTACTTTCTGTTTTGCTAGCTATGTTTTTAATTTTAAATTCATTCGCATGCTTGGACTAAGAAGGTGAACGTTTTAATTATTTCAGGTTATGGAGATCAGAGAATCTGTTGAAGAAGCTCCTGATTCTCAGGCATTAAAACAGATCCAGGCAGAGGTTTGAGATTTTCTATAGAAGTCTGAAATTGGATTGCTAATGAGCTGTTGCTTGTTACCTTTTTAAATGGTCATGGCTTGTCTTATTAGCAATCCTGAAAAGTGTGTTAGCATTTGGAAGCCGGCATAGCAAAACATAAGTCAGGCCAAAATCTTTGGCTTTGCTGTTTCTGGCTTTATGGTTTTATAGCTAATAATTTGTTACCATATTGGTTCAGGTACAAGAGAAAATGAAACAATGGTCTGAGACATTTGCAGGAGCATTCAAAAGCCAGGAAACAGAAAAGGCATTAAATGCCATCCGTAGAATGACATATTTTATACGTGCAAATGAGGAAATTGTGAAACGGCTCTGATATTGGTTGTGTATCAAAATTTTGCAAACTTCACTGGATCCTTTGGCGAAGCACTAGATCTGCATCTGCAGTCTATTCTTTTGGTTGTTCAGAGCGCTGCTGTCAGATTTGAAAAAGTTTACACCTTTTCAACTGTAGTTAGAAGCGCTTGTTACTTGTTAGCAAACGCGTAAAATCAAGCTATTAAGCTGAAGGGTGCAGAGTGCAGAGTGCAGACACCAGGGTTTTTTCTGTGAATGTATCTTAGGTGCAGCCGTACAGGCATACAACACTGGGGTTCAGATGTAATAATGAATAGCGAAAGAGGTGGTAGCAAGGGAAGTCGAAGAAGTCTGGTTTAGTAAAAGAGGGCAAGCATAATCATGAATGCAAAATTCTGAAGTTTGTTAGGTTCCAAAAGTTCTTACATCTTTTGAAAGAAAAACTAGTGTGTGGCCCGGACGATGCCCCGGTTGCTACTTGAATAATTAAAATTCGAGATTTTTTTTCAACTCAATATTTGACCAAAACACATGTAGTCCATAAAAGTGAAAAGATTCATTAAACATCAACTACACATTTACGTTAATCATTTTTCATGTCAATTATTTTTCAATCAGATCATCTTATAATTCTTAATTAACACTAAACTGTATTTATTAGACTTCGC

mRNA sequence

CATTTGCCAAGTTCACAAGTCACAAGCTCACAAGTGAAATAGCCAATACGTAGTACCACCGTGAAACCGTCCACCTATAACTTTCTTTTACCGGCGCTGCAAAATACTCCGATGAACACCATGAGACTACCATGGCGTCGATTCTCAGCCCTCCTCCGCCGAAATTTGAAGCCCATTTTCTCTCTTTCCTCTCCCGCCCTTCATTCCCATACTCGACCTCTCTCTTCTCTCTCCTCTCCCGCACTCCCTCCCCATTCCAATTTTCCTGCAAATTTTCTCCACAGCTTTCCCAATCAATCATCCAAGCTTTTTCGCTTCGAATCATCATCATCAAGCTCCGAATTTCGAAGATGCTGGAATTGCAACTCGTCCCCAACAACCTCACAACTCTTCCTCGTTTGCGATTCTTGCCGTTGCATTCAACCCGTTGATCGCTCCGTTGATTACTTTCGGATTTTTGGACTGGAGCAAAAATACGATATCAAGGAGAGTAATTTAGAGGGCGTGTATAAAGACTGGCAGAAGAAACTGCATCCTGATCTAGTTCATTCAAAGTCTGAGAGTGAAAGGGAGTATGCTGCTGAGCAATCATCTCGAGTCATTGATGCTTACAGGACACTAAAAAATTCCTTATCGAGGGCTATATACCTTATGAAGCTACAGGGTGTACATGTTGATGAAGAGCAGACTGTTTCAGATCCAGAATTACTAGCTGAGGTTATGGAGATCAGAGAATCTGTTGAAGAAGCTCCTGATTCTCAGGCATTAAAACAGATCCAGGCAGAGGTACAAGAGAAAATGAAACAATGGTCTGAGACATTTGCAGGAGCATTCAAAAGCCAGGAAACAGAAAAGGCATTAAATGCCATCCGTAGAATGACATATTTTATACGTGCAAATGAGGAAATTGTGAAACGGCTCTGATATTGGTTGTGTATCAAAATTTTGCAAACTTCACTGGATCCTTTGGCGAAGCACTAGATCTGCATCTGCAGTCTATTCTTTTGGTTGTTCAGAGCGCTGCTGTCAGATTTGAAAAAGTTTACACCTTTTCAACTGTAGTTAGAAGCGCTTGTTACTTGTTAGCAAACGCGTAAAATCAAGCTATTAAGCTGAAGGGTGCAGAGTGCAGAGTGCAGACACCAGGGTTTTTTCTGTGAATGTATCTTAGGTGCAGCCGTACAGGCATACAACACTGGGGTTCAGATGTAATAATGAATAGCGAAAGAGGTGGTAGCAAGGGAAGTCGAAGAAGTCTGGTTTAGTAAAAGAGGGCAAGCATAATCATGAATGCAAAATTCTGAAGTTTGTTAGGTTCCAAAAGTTCTTACATCTTTTGAAAGAAAAACTAGTGTGTGGCCCGGACGATGCCCCGGTTGCTACTTGAATAATTAAAATTCGAGATTTTTTTTCAACTCAATATTTGACCAAAACACATGTAGTCCATAAAAGTGAAAAGATTCATTAAACATCAACTACACATTTACGTTAATCATTTTTCATGTCAATTATTTTTCAATCAGATCATCTTATAATTCTTAATTAACACTAAACTGTATTTATTAGACTTCGC

Coding sequence (CDS)

ATGAACACCATGAGACTACCATGGCGTCGATTCTCAGCCCTCCTCCGCCGAAATTTGAAGCCCATTTTCTCTCTTTCCTCTCCCGCCCTTCATTCCCATACTCGACCTCTCTCTTCTCTCTCCTCTCCCGCACTCCCTCCCCATTCCAATTTTCCTGCAAATTTTCTCCACAGCTTTCCCAATCAATCATCCAAGCTTTTTCGCTTCGAATCATCATCATCAAGCTCCGAATTTCGAAGATGCTGGAATTGCAACTCGTCCCCAACAACCTCACAACTCTTCCTCGTTTGCGATTCTTGCCGTTGCATTCAACCCGTTGATCGCTCCGTTGATTACTTTCGGATTTTTGGACTGGAGCAAAAATACGATATCAAGGAGAGTAATTTAGAGGGCGTGTATAAAGACTGGCAGAAGAAACTGCATCCTGATCTAGTTCATTCAAAGTCTGAGAGTGAAAGGGAGTATGCTGCTGAGCAATCATCTCGAGTCATTGATGCTTACAGGACACTAAAAAATTCCTTATCGAGGGCTATATACCTTATGAAGCTACAGGGTGTACATGTTGATGAAGAGCAGACTGTTTCAGATCCAGAATTACTAGCTGAGGTTATGGAGATCAGAGAATCTGTTGAAGAAGCTCCTGATTCTCAGGCATTAAAACAGATCCAGGCAGAGGTACAAGAGAAAATGAAACAATGGTCTGAGACATTTGCAGGAGCATTCAAAAGCCAGGAAACAGAAAAGGCATTAAATGCCATCCGTAGAATGACATATTTTATACGTGCAAATGAGGAAATTGTGAAACGGCTCTGA

Protein sequence

MNTMRLPWRRFSALLRRNLKPIFSLSSPALHSHTRPLSSLSSPALPPHSNFPANFLHSFPNQSSKLFRFESSSSSSEFRRCWNCNSSPTTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQKYDIKESNLEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYLMKLQGVHVDEEQTVSDPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGAFKSQETEKALNAIRRMTYFIRANEEIVKRL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo10503	Spo10503	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo10503.1	Spo10503.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10503.1.exon.1	Spo10503.1.exon.1	exon
Spo10503.1.exon.2	Spo10503.1.exon.2	exon
Spo10503.1.exon.3	Spo10503.1.exon.3	exon
Spo10503.1.exon.4	Spo10503.1.exon.4	exon
Spo10503.1.exon.5	Spo10503.1.exon.5	exon
Spo10503.1.exon.6	Spo10503.1.exon.6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10503.1.utr5p.1	Spo10503.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10503.1.CDS.1	Spo10503.1.CDS.1	CDS
Spo10503.1.CDS.2	Spo10503.1.CDS.2	CDS
Spo10503.1.CDS.3	Spo10503.1.CDS.3	CDS
Spo10503.1.CDS.4	Spo10503.1.CDS.4	CDS
Spo10503.1.CDS.5	Spo10503.1.CDS.5	CDS
Spo10503.1.CDS.6	Spo10503.1.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10503.1.utr3p.1	Spo10503.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo10503.1 vs. NCBI nr
Match: gi|902234612|gb|KNA23512.1| (hypothetical protein SOVF_024200 [Spinacia oleracea])

HSP 1 Score: 521.5 bits (1342), Expect = 8.500e-145
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 1


		  
Query: 1   MNTMRLPWRRFSALLRRNLKPIFSLSSPALHSHTRPLSSLSSPALPPHSNFPANFLHSFP 60
           MNTMRLPWRRFSALLRRNLKPIFSLSSPALHSHTRPLSSLSSPALPPHSNFPANFLHSFP
Sbjct: 1   MNTMRLPWRRFSALLRRNLKPIFSLSSPALHSHTRPLSSLSSPALPPHSNFPANFLHSFP 60

Query: 61  NQSSKLFRFESSSSSSEFRRCWNCNSSPTTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQ 120
           NQSSKLFRFESSSSSSEFRRCWNCNSSPTTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQ
Sbjct: 61  NQSSKLFRFESSSSSSEFRRCWNCNSSPTTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQ 120

Query: 121 KYDIKESNLEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYL 180
           KYDIKESNLEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYL
Sbjct: 121 KYDIKESNLEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYL 180

Query: 181 MKLQGVHVDEEQTVSDPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGA 240
           MKLQGVHVDEEQTVSDPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGA
Sbjct: 181 MKLQGVHVDEEQTVSDPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGA 240

Query: 241 FKSQETEKALNAIRRMTYFIRANEEIVKRL 271
           FKSQETEKALNAIRRMTYFIRANEEIVKRL
Sbjct: 241 FKSQETEKALNAIRRMTYFIRANEEIVKRL 270

[Close]

BLAST of Spo10503.1 vs. NCBI nr
Match: gi|731333146|ref|XP_010677577.1| (PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 375.6 bits (963), Expect = 7.500e-101
Identity = 201/270 (74.44%), Postives = 226/270 (83.70%), Query Frame = 1


		  
Query: 1   MNTMRLPWRRFSALLRRNLKPIFSLSSPALHSHTRPLSSLSSPALPPHSNFPANFLHSFP 60
           M T+++  RRFS   R  L+ I S+S    H HT+ LSS S  +LP       NFLH+FP
Sbjct: 2   MKTVKVLCRRFSVFSRTELRSISSVSPNTFHYHTQSLSSFSPTSLPH------NFLHTFP 61

Query: 61  NQSSKLFRFESSSSSSEFRRCWNCNSSPTTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQ 120
           NQSSKLF    S S+SE RRCWNCNSS TTS LFLVC++CRCIQPVD S+DYFRIFGLEQ
Sbjct: 62  NQSSKLF-CSQSFSNSELRRCWNCNSSATTSDLFLVCNNCRCIQPVDPSIDYFRIFGLEQ 121

Query: 121 KYDIKESNLEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYL 180
            +DI ESNLEG+YKDWQKKLHPDLVHSKSESE+EYAAEQS+RVIDAY+TL+NSLSRAIYL
Sbjct: 122 IFDIDESNLEGMYKDWQKKLHPDLVHSKSESEKEYAAEQSARVIDAYKTLRNSLSRAIYL 181

Query: 181 MKLQGVHVDEEQTVSDPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGA 240
           MKL+GVHVDEEQTVSDPELLAE+ME+RESVEEAPDSQALK IQ EVQEK+KQWSE FAGA
Sbjct: 182 MKLRGVHVDEEQTVSDPELLAEIMELRESVEEAPDSQALKHIQHEVQEKLKQWSERFAGA 241

Query: 241 FKSQETEKALNAIRRMTYFIRANEEIVKRL 271
            K Q+TE+ALN IRRMTY+ RANEEIVKRL
Sbjct: 242 LKKQDTEEALNVIRRMTYYKRANEEIVKRL 264

[Close]

BLAST of Spo10503.1 vs. NCBI nr
Match: gi|731333150|ref|XP_010677579.1| (PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 310.8 bits (795), Expect = 2.300e-81
Identity = 175/270 (64.81%), Postives = 196/270 (72.59%), Query Frame = 1


		  
Query: 1   MNTMRLPWRRFSALLRRNLKPIFSLSSPALHSHTRPLSSLSSPALPPHSNFPANFLHSFP 60
           M T+++  RRFS   R  L+ I S+S    H HT+ LSS S  +LP       NFLH+FP
Sbjct: 2   MKTVKVLCRRFSVFSRTELRSISSVSPNTFHYHTQSLSSFSPTSLPH------NFLHTFP 61

Query: 61  NQSSKLFRFESSSSSSEFRRCWNCNSSPTTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQ 120
           NQSSKLF    S S+SE RRCWNCNSS TTS LFLVC++CRCIQPVD S+DYFRIFGLEQ
Sbjct: 62  NQSSKLF-CSQSFSNSELRRCWNCNSSATTSDLFLVCNNCRCIQPVDPSIDYFRIFGLEQ 121

Query: 121 KYDIKESNLEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYL 180
            +DI ESNLEG+YKDWQKKLHPDLVHSKSE                              
Sbjct: 122 IFDIDESNLEGMYKDWQKKLHPDLVHSKSE------------------------------ 181

Query: 181 MKLQGVHVDEEQTVSDPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGA 240
           MKL+GVHVDEEQTVSDPELLAE+ME+RESVEEAPDSQALK IQ EVQEK+KQWSE FAGA
Sbjct: 182 MKLRGVHVDEEQTVSDPELLAEIMELRESVEEAPDSQALKHIQHEVQEKLKQWSERFAGA 234

Query: 241 FKSQETEKALNAIRRMTYFIRANEEIVKRL 271
            K Q+TE+ALN IRRMTY+ RANEEIVKRL
Sbjct: 242 LKKQDTEEALNVIRRMTYYKRANEEIVKRL 234

[Close]

BLAST of Spo10503.1 vs. NCBI nr
Match: gi|470135191|ref|XP_004303407.1| (PREDICTED: iron-sulfur cluster co-chaperone protein HscB, mitochondrial [Fragaria vesca subsp. vesca])

HSP 1 Score: 267.3 bits (682), Expect = 2.900e-68
Identity = 133/197 (67.51%), Postives = 163/197 (82.74%), Query Frame = 1


		  
Query: 73  SSSSEFRRCWNCNSSPTTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQKYDIKESNLEGV 132
           SS S   +CWNC ++   +  FL+C SCRCIQPVD SVDYF+IFGLE+KYD  E +LEG 
Sbjct: 49  SSQSNPAQCWNCCAAAAATTPFLLCSSCRCIQPVDHSVDYFQIFGLERKYDSVEEHLEGK 108

Query: 133 YKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYLMKLQGVHVDEEQ 192
           YKDWQKKLHPDLVHSKSE EREYAAEQS+RVIDAY TL   L+RAIY++KL+GVH+DEE+
Sbjct: 109 YKDWQKKLHPDLVHSKSEKEREYAAEQSARVIDAYHTLSKPLARAIYILKLEGVHIDEEE 168

Query: 193 TVSDPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGAFKSQETEKALNA 252
           T++D +LL+E+MEIRE+VEEAPD+QAL QIQ+++QEK+KQW   FA AF+S   E+A+ A
Sbjct: 169 TLTDLDLLSEIMEIREAVEEAPDAQALNQIQSQMQEKLKQWCNNFAKAFESHNFEEAVKA 228

Query: 253 IRRMTYFIRANEEIVKR 270
           IR MTY+ R NEEIVKR
Sbjct: 229 IRCMTYYERVNEEIVKR 245

[Close]

BLAST of Spo10503.1 vs. NCBI nr
Match: gi|566177443|ref|XP_006381930.1| (hypothetical protein POPTR_0006s21520g [Populus trichocarpa])

HSP 1 Score: 267.3 bits (682), Expect = 2.900e-68
Identity = 148/243 (60.91%), Postives = 180/243 (74.07%), Query Frame = 1


		  
Query: 47  PHSNFPANFLHSFPNQSSKLFRFESSSSSSEFR------------------RCWNCNSSP 106
           PHS FP     S+ N + K+    SS  SS F                   RCWNCN+ P
Sbjct: 42  PHSPFP---FFSYNNNNKKIQTSSSSGFSSHFLSFSGKSFCSAQSSEKTNLRCWNCNAEP 101

Query: 107 TTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQKYDIKES-NLEGVYKDWQKKLHPDLVHS 166
             +  FLVC+SC  IQPVD SVDYF+IFGLE KY+I+E  NLE  YK+WQKKLHPDLVHS
Sbjct: 102 QNAP-FLVCESCTTIQPVDHSVDYFQIFGLENKYEIEEDHNLEVKYKNWQKKLHPDLVHS 161

Query: 167 KSESEREYAAEQSSRVIDAYRTLKNSLSRAIYLMKLQGVHVDEEQTVSDPELLAEVMEIR 226
           K E ERE+AAEQS+RVIDAYRTL N+LSRAIY++KL+GV+V+EE+TVS+PELLAE+MEIR
Sbjct: 162 KPEKEREFAAEQSARVIDAYRTLNNALSRAIYILKLEGVNVNEEETVSEPELLAEIMEIR 221

Query: 227 ESVEEAPDSQALKQIQAEVQEKMKQWSETFAGAFKSQETEKALNAIRRMTYFIRANEEIV 271
           E+VEEAPD QALK+IQ+ +QEK++ WS +FA AF+  + E+A N IRRMTY+ R NEEIV
Sbjct: 222 EAVEEAPDYQALKEIQSLMQEKLQNWSNSFASAFRGHKFEEAKNCIRRMTYYDRVNEEIV 280

[Close]

BLAST of Spo10503.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RXC1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_024200 PE=4 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 5.900e-145
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 1


		  
Query: 1   MNTMRLPWRRFSALLRRNLKPIFSLSSPALHSHTRPLSSLSSPALPPHSNFPANFLHSFP 60
           MNTMRLPWRRFSALLRRNLKPIFSLSSPALHSHTRPLSSLSSPALPPHSNFPANFLHSFP
Sbjct: 1   MNTMRLPWRRFSALLRRNLKPIFSLSSPALHSHTRPLSSLSSPALPPHSNFPANFLHSFP 60

Query: 61  NQSSKLFRFESSSSSSEFRRCWNCNSSPTTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQ 120
           NQSSKLFRFESSSSSSEFRRCWNCNSSPTTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQ
Sbjct: 61  NQSSKLFRFESSSSSSEFRRCWNCNSSPTTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQ 120

Query: 121 KYDIKESNLEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYL 180
           KYDIKESNLEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYL
Sbjct: 121 KYDIKESNLEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYL 180

Query: 181 MKLQGVHVDEEQTVSDPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGA 240
           MKLQGVHVDEEQTVSDPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGA
Sbjct: 181 MKLQGVHVDEEQTVSDPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGA 240

Query: 241 FKSQETEKALNAIRRMTYFIRANEEIVKRL 271
           FKSQETEKALNAIRRMTYFIRANEEIVKRL
Sbjct: 241 FKSQETEKALNAIRRMTYFIRANEEIVKRL 270

[Close]

BLAST of Spo10503.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CCP1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g108900 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 5.200e-101
Identity = 201/270 (74.44%), Postives = 226/270 (83.70%), Query Frame = 1


		  
Query: 1   MNTMRLPWRRFSALLRRNLKPIFSLSSPALHSHTRPLSSLSSPALPPHSNFPANFLHSFP 60
           M T+++  RRFS   R  L+ I S+S    H HT+ LSS S  +LP       NFLH+FP
Sbjct: 2   MKTVKVLCRRFSVFSRTELRSISSVSPNTFHYHTQSLSSFSPTSLPH------NFLHTFP 61

Query: 61  NQSSKLFRFESSSSSSEFRRCWNCNSSPTTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQ 120
           NQSSKLF    S S+SE RRCWNCNSS TTS LFLVC++CRCIQPVD S+DYFRIFGLEQ
Sbjct: 62  NQSSKLF-CSQSFSNSELRRCWNCNSSATTSDLFLVCNNCRCIQPVDPSIDYFRIFGLEQ 121

Query: 121 KYDIKESNLEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYL 180
            +DI ESNLEG+YKDWQKKLHPDLVHSKSESE+EYAAEQS+RVIDAY+TL+NSLSRAIYL
Sbjct: 122 IFDIDESNLEGMYKDWQKKLHPDLVHSKSESEKEYAAEQSARVIDAYKTLRNSLSRAIYL 181

Query: 181 MKLQGVHVDEEQTVSDPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGA 240
           MKL+GVHVDEEQTVSDPELLAE+ME+RESVEEAPDSQALK IQ EVQEK+KQWSE FAGA
Sbjct: 182 MKLRGVHVDEEQTVSDPELLAEIMELRESVEEAPDSQALKHIQHEVQEKLKQWSERFAGA 241

Query: 241 FKSQETEKALNAIRRMTYFIRANEEIVKRL 271
            K Q+TE+ALN IRRMTY+ RANEEIVKRL
Sbjct: 242 LKKQDTEEALNVIRRMTYYKRANEEIVKRL 264

[Close]

BLAST of Spo10503.1 vs. UniProtKB/TrEMBL
Match: U5GE66_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s21520g PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.000e-68
Identity = 148/243 (60.91%), Postives = 180/243 (74.07%), Query Frame = 1


		  
Query: 47  PHSNFPANFLHSFPNQSSKLFRFESSSSSSEFR------------------RCWNCNSSP 106
           PHS FP     S+ N + K+    SS  SS F                   RCWNCN+ P
Sbjct: 42  PHSPFP---FFSYNNNNKKIQTSSSSGFSSHFLSFSGKSFCSAQSSEKTNLRCWNCNAEP 101

Query: 107 TTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQKYDIKES-NLEGVYKDWQKKLHPDLVHS 166
             +  FLVC+SC  IQPVD SVDYF+IFGLE KY+I+E  NLE  YK+WQKKLHPDLVHS
Sbjct: 102 QNAP-FLVCESCTTIQPVDHSVDYFQIFGLENKYEIEEDHNLEVKYKNWQKKLHPDLVHS 161

Query: 167 KSESEREYAAEQSSRVIDAYRTLKNSLSRAIYLMKLQGVHVDEEQTVSDPELLAEVMEIR 226
           K E ERE+AAEQS+RVIDAYRTL N+LSRAIY++KL+GV+V+EE+TVS+PELLAE+MEIR
Sbjct: 162 KPEKEREFAAEQSARVIDAYRTLNNALSRAIYILKLEGVNVNEEETVSEPELLAEIMEIR 221

Query: 227 ESVEEAPDSQALKQIQAEVQEKMKQWSETFAGAFKSQETEKALNAIRRMTYFIRANEEIV 271
           E+VEEAPD QALK+IQ+ +QEK++ WS +FA AF+  + E+A N IRRMTY+ R NEEIV
Sbjct: 222 EAVEEAPDYQALKEIQSLMQEKLQNWSNSFASAFRGHKFEEAKNCIRRMTYYDRVNEEIV 280

[Close]

BLAST of Spo10503.1 vs. UniProtKB/TrEMBL
Match: A0A0D2NS11_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G233900 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 7.600e-68
Identity = 149/258 (57.75%), Postives = 189/258 (73.26%), Query Frame = 1


		  
Query: 17  RNLKPIFSLSS-PALHSHTRPLSSLSSPALPPHSNFPANFLHSFPNQSSKLFRFESSSSS 76
           R L P FS S  P+L SH +     SS  +PP        LH  PN +       S S++
Sbjct: 23  RRLSPYFSNSRIPSLSSHLQ-----SSSRVPPRYA-----LHFLPNSNFSFQNLCSQSAA 82

Query: 77  ---SEFRRCWNCNSSPTTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQKYDIKESNLEGV 136
              S  +RCWNC +  T +  FL CDSCR IQPVD S+DYF+IFGLE+KY+I+   LEG 
Sbjct: 83  KLDSSTKRCWNCVADKTGTTPFLYCDSCRSIQPVDSSIDYFQIFGLEKKYEIEVDGLEGK 142

Query: 137 YKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYLMKLQGVHVDEEQ 196
           YKDWQKKLHPDLVHSKSE ER YAAEQS+RVIDAYRTL   LSRAIY+++L+GV VDEEQ
Sbjct: 143 YKDWQKKLHPDLVHSKSEKERGYAAEQSARVIDAYRTLSKPLSRAIYILRLEGVDVDEEQ 202

Query: 197 TVSDPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGAFKSQETEKALNA 256
           TVSDPELL E+MEIRE+VEEAPDSQAL QIQ++++EK+++ S +F  A++S+  ++A+  
Sbjct: 203 TVSDPELLTEIMEIREAVEEAPDSQALNQIQSKMEEKLQESSNSFVNAYQSRNFDEAVAC 262

Query: 257 IRRMTYFIRANEEIVKRL 271
           I+RMTY+ RA+EEI+K+L
Sbjct: 263 IQRMTYYQRASEEILKKL 270

[Close]

BLAST of Spo10503.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MIX8_GOSAR (Iron-sulfur cluster co-chaperone HscB, mitochondrial OS=Gossypium arboreum GN=F383_19004 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.000e-67
Identity = 150/256 (58.59%), Postives = 191/256 (74.61%), Query Frame = 1


		  
Query: 16  RRNLKPIFSLSS-PALHSHTRPLSSLSSPALPPHSNFPANFLHSFPNQSSKLFRFESSSS 75
           RR L P FS S  P+L SH +  SS   P+   H    +NF  SF N  S+     ++  
Sbjct: 22  RRRLSPYFSNSQIPSLSSHLQS-SSRVPPSYALHFLLNSNF--SFQNLCSQ----SAAKL 81

Query: 76  SSEFRRCWNCNSSPTTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQKYDIKESNLEGVYK 135
            S  +RCWNC +  T +  FL CDSCR IQPVD S+DYF+IFGLE+KY+I+  +LEG YK
Sbjct: 82  DSSTKRCWNCVADKTGTTPFLYCDSCRSIQPVDLSIDYFQIFGLEKKYEIEVDSLEGKYK 141

Query: 136 DWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYLMKLQGVHVDEEQTV 195
           DWQKKLHPDLVHSKSE ER YAAEQS+RVIDAYRTL   LSRAIY+++L+GV VDEEQTV
Sbjct: 142 DWQKKLHPDLVHSKSEKERGYAAEQSARVIDAYRTLSKPLSRAIYILRLEGVDVDEEQTV 201

Query: 196 SDPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGAFKSQETEKALNAIR 255
           SDPELL E+MEIRE+VEEAPDSQAL QIQ+++ EK+++ S +F  A++S+  ++A+  I+
Sbjct: 202 SDPELLTEIMEIREAVEEAPDSQALNQIQSKMAEKLEESSNSFVNAYQSRNFDEAVACIQ 261

Query: 256 RMTYFIRANEEIVKRL 271
           RMTY+ RA+EEI+K+L
Sbjct: 262 RMTYYQRASEEILKKL 270

[Close]

BLAST of Spo10503.1 vs. ExPASy Swiss-Prot
Match: HSC20_HUMAN (Iron-sulfur cluster co-chaperone protein HscB, mitochondrial OS=Homo sapiens GN=HSCB PE=1 SV=3)

HSP 1 Score: 117.5 bits (293), Expect = 2.300e-25
Identity = 65/199 (32.66%), Postives = 112/199 (56.28%), Query Frame = 1


		  
Query: 71  SSSSSSEFRRCWNCNS--SPTTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQKYDIKESN 130
           +S + S + RCWNC     P     F  C  CR +Q  D + DYF +    + + +  + 
Sbjct: 31  ASQAGSNYPRCWNCGGPWGPGREDRFF-CPQCRALQAPDPTRDYFSLMDCNRSFRVDTAK 90

Query: 131 LEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYLMKLQGVHV 190
           L+  Y+  Q+ +HPD    +S++E++++ + S+ V DAY+TL   LSR +YL+KL G+ +
Sbjct: 91  LQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLHGIEI 150

Query: 191 DEEQTVS-DPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGAFKSQETE 250
            E      D + L E+MEI E + EA    A+K+I++ V+ K K++++  + AF+  + E
Sbjct: 151 PERTDYEMDRQFLIEIMEINEKLAEAESEAAMKEIESIVKAKQKEFTDNVSSAFEQDDFE 210

Query: 251 KALNAIRRMTYFIRANEEI 267
           +A   + +M YF    E+I
Sbjct: 211 EAKEILTKMRYFSNIEEKI 228

[Close]

BLAST of Spo10503.1 vs. ExPASy Swiss-Prot
Match: HSC20_MOUSE (Iron-sulfur cluster co-chaperone protein HscB, mitochondrial OS=Mus musculus GN=Hscb PE=1 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 1.100e-24
Identity = 65/206 (31.55%), Postives = 116/206 (56.31%), Query Frame = 1


		  
Query: 65  KLFRFESSSSSSEFRRCWNCNSSPTTS---QLFLVCDSCRCIQPVDRSVDYFRIFGLEQK 124
           +L    +++  S   +CWNC  +       + F  C  CR +QP D + DYF +    + 
Sbjct: 24  RLLGSNAAAGKSIAPQCWNCGHAREAGCGDEFF--CSHCRALQPPDPTRDYFSLMNCNRS 83

Query: 125 YDIKESNLEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYLM 184
           + +  + L+  Y+  Q+ +HPD    KS++E+ ++ + S+ V DAY+TL+  L+R +YL+
Sbjct: 84  FRVDVTKLQHRYQQLQRLVHPDFFSQKSQTEKHFSDKHSTLVNDAYKTLQAPLTRGLYLL 143

Query: 185 KLQGVHVDE-EQTVSDPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGA 244
           KLQG+ + E     +D + L E+MEI E + +A    A+++I+A V+ K K++++    A
Sbjct: 144 KLQGIEIPEGTDYKADSQFLVEIMEINERLADAQSEAAMEEIEATVRAKQKEFTDNINSA 203

Query: 245 FKSQETEKALNAIRRMTYFIRANEEI 267
           F+  + EKA   + +M YF    E+I
Sbjct: 204 FEQGDFEKAKELLTKMRYFSNIEEKI 227

[Close]

BLAST of Spo10503.1 vs. ExPASy Swiss-Prot
Match: HSCB_VIBCM (Co-chaperone protein HscB homolog OS=Vibrio cholerae serotype O1 (strain M66-2) GN=hscB PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.700e-16
Identity = 54/162 (33.33%), Postives = 89/162 (54.94%), Query Frame = 1


		  
Query: 110 VDYFRIFGLEQKYDIKESNLEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRT 169
           ++YF +FGL  ++++  S L   ++  QK+ HPD   + SE +R  A +Q++++ DAY+T
Sbjct: 1   MNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQT 60

Query: 170 LKNSLSRAIYLMKLQGVHVD-EEQTVSDPELLAEVMEIRESVEE----APDSQALKQIQA 229
           LK+SL RA YL+ LQG+ +  E+QT+ DP  L E ME+RE +E     A    AL     
Sbjct: 61  LKDSLRRAEYLLSLQGIEMKAEQQTLQDPMFLMEQMELREELESVTACADPEAALVAFDT 120

Query: 230 EVQEKMKQWSETFAGAFKSQETEKALNAIRRMTYFIRANEEI 267
           +V    + +     G     E   A + IR++ +  +   E+
Sbjct: 121 KVTAMQRHYLAQLQGQLAQSEWLAAADQIRKLKFIAKLKNEV 162

[Close]

BLAST of Spo10503.1 vs. ExPASy Swiss-Prot
Match: HSCB_VIBVU (Co-chaperone protein HscB homolog OS=Vibrio vulnificus (strain CMCP6) GN=hscB PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.700e-16
Identity = 52/162 (32.10%), Postives = 89/162 (54.94%), Query Frame = 1


		  
Query: 110 VDYFRIFGLEQKYDIKESNLEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRT 169
           +++F +FGL  ++ +  S L   +++ QK+ HPD   + SE +R  A ++++++ DAY+ 
Sbjct: 1   MNHFELFGLPPQFSLDGSLLSSQFRELQKRFHPDNFATASERDRLLAVQKAAQINDAYQV 60

Query: 170 LKNSLSRAIYLMKLQGVHV-DEEQTVSDPELLAEVMEIRESVEEAPD----SQALKQIQA 229
           LKN +SRA YL+   G+ +  E+QT+ DP  L E ME+RE +EE P       AL    A
Sbjct: 61  LKNPISRAEYLLSQNGLEIRGEQQTMQDPMFLMEQMELREELEEIPHGSDAESALAAFDA 120

Query: 230 EVQEKMKQWSETFAGAFKSQETEKALNAIRRMTYFIRANEEI 267
            V +  KQ   T        +  +A + +R++ +  +   EI
Sbjct: 121 RVSKMYKQHLATIEQELNDAQWPQAADRVRKLKFIAKLKNEI 162

[Close]

BLAST of Spo10503.1 vs. ExPASy Swiss-Prot
Match: HSCB_VIBCH (Co-chaperone protein HscB homolog OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=hscB PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.300e-15
Identity = 53/162 (32.72%), Postives = 89/162 (54.94%), Query Frame = 1


		  
Query: 110 VDYFRIFGLEQKYDIKESNLEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRT 169
           ++YF +FGL  ++++  S L   ++  QK+ HPD   + SE +R  A +Q++++ DAY+T
Sbjct: 1   MNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQT 60

Query: 170 LKNSLSRAIYLMKLQGVHVD-EEQTVSDPELLAEVMEIRESVEE----APDSQALKQIQA 229
           LK+ L RA YL+ LQG+ ++ E+QT+ DP  L E ME+RE +E     A    AL     
Sbjct: 61  LKDPLRRAEYLLSLQGIEMNAEQQTLQDPMFLMEQMELREELESVTACADPEAALVAFDT 120

Query: 230 EVQEKMKQWSETFAGAFKSQETEKALNAIRRMTYFIRANEEI 267
           +V    + +     G     E   A + IR++ +  +   E+
Sbjct: 121 KVTAMQRHYLAQLQGQLAQSEWLAAADQIRKLKFIAKLKNEV 162

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BLAST of Spo10503.1 vs. TAIR (Arabidopsis)
Match: AT5G06410.1 (DNAJ heat shock N-terminal domain-containing protein)

HSP 1 Score: 232.3 bits (591), Expect = 3.600e-61
Identity = 120/208 (57.69%), Postives = 160/208 (76.92%), Query Frame = 1


		  
Query: 63  SSKLFRFESSSSSSEFRRCWNCNSSPTTSQLFLVCDSCRCIQPVDRSVDYFRIFGLEQKY 122
           S ++F  ES +       CWNC         FL C+SCR IQPVD SVDYF+IFGLE+KY
Sbjct: 55  SGRVFCSESGAG------CWNCGEKAA----FLFCNSCRSIQPVDDSVDYFQIFGLEKKY 114

Query: 123 DIKESNLEGVYKDWQKKLHPDLVHSKSESEREYAAEQSSRVIDAYRTLKNSLSRAIYLMK 182
           +I   +LEG YKDWQKKLHPDLVH+KS+ ER+YAAEQS++V +A RTL   LSRA+Y+MK
Sbjct: 115 EIDPGSLEGKYKDWQKKLHPDLVHNKSKKERDYAAEQSAKVTEACRTLTKRLSRAMYIMK 174

Query: 183 LQGVHVDEEQTVSDPELLAEVMEIRESVEEAPDSQALKQIQAEVQEKMKQWSETFAGAFK 242
           L GV+V+EE+T++DP LL E+ME+RE++ EA DS +L QI+++VQEK+KQWS++F  AF+
Sbjct: 175 LNGVNVNEEETITDPTLLMEIMELREAISEADDSTSLNQIRSQVQEKLKQWSDSFVEAFE 234

Query: 243 SQETEKALNAIRRMTYFIRANEEIVKRL 271
           SQ+ + A+  I+RMTY+ RA EEI+K+L
Sbjct: 235 SQKFDDAVKCIQRMTYYERACEEILKKL 252

The following BLAST results are available for this feature:

BLAST of Spo10503.1 vs. NCBI nr
BLAST of Spo10503.1 vs. UniProtKB/TrEMBL
BLAST of Spo10503.1 vs. ExPASy Swiss-Prot
BLAST of Spo10503.1 vs. TAIR (Arabidopsis)

BLAST of Spo10503.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902234612\|gb\|KNA23512.1\|	8.5e-145	100.	hypothetical protein SOVF_0242...	[more]
gi\|731333146\|ref\|XP_010677577.1\|	7.5e-101	74.4	PREDICTED: iron-sulfur cluster...	[more]
gi\|731333150\|ref\|XP_010677579.1\|	2.3e-81	64.8	PREDICTED: iron-sulfur cluster...	[more]
gi\|470135191\|ref\|XP_004303407.1\|	2.9e-68	67.5	PREDICTED: iron-sulfur cluster...	[more]
gi\|566177443\|ref\|XP_006381930.1\|	2.9e-68	60.9	hypothetical protein POPTR_000...	[more]

BLAST of Spo10503.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RXC1_SPIOL	5.9e-145	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CCP1_BETVU	5.2e-101	74.4	Uncharacterized protein OS=Bet...	[more]
U5GE66_POPTR	2.0e-68	60.9	Uncharacterized protein OS=Pop...	[more]
A0A0D2NS11_GOSRA	7.6e-68	57.7	Uncharacterized protein OS=Gos...	[more]
A0A0B0MIX8_GOSAR	1.0e-67	58.5	Iron-sulfur cluster co-chapero...	[more]

BLAST of Spo10503.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
HSC20_HUMAN	2.3e-25	32.6	Iron-sulfur cluster co-chapero...	[more]
HSC20_MOUSE	1.1e-24	31.5	Iron-sulfur cluster co-chapero...	[more]
HSCB_VIBCM	5.7e-16	33.3	Co-chaperone protein HscB homo...	[more]
HSCB_VIBVU	5.7e-16	32.1	Co-chaperone protein HscB homo...	[more]
HSCB_VIBCH	1.3e-15	32.7	Co-chaperone protein HscB homo...	[more]

BLAST of Spo10503.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G06410.1	3.6e-61	57.6	DNAJ heat shock N-terminal dom...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001623	DnaJ domain	GENE3D	1.10.287.110		coord: 76..181 score: 2.9
IPR001623	DnaJ domain	SMART	SM00271	dnaj_3	coord: 110..175 score: 0.
IPR001623	DnaJ domain	PROFILE	PS50076	DNAJ_2	coord: 111..183 score: 9
IPR001623	DnaJ domain	unknown	SSF46565	Chaperone J-domain	coord: 110..183 score: 2.09
IPR004640	Co-chaperone Hsc20	PANTHER	PTHR14021	FAMILY NOT NAMED	coord: 18..270 score: 1.9
IPR004640	Co-chaperone Hsc20	TIGRFAMs	TIGR00714	TIGR00714	coord: 122..265 score: 7.4
IPR009073	Co-chaperone HscB, C-terminal oligomerisation domain	GENE3D	1.20.1280.20		coord: 189..267 score: 1.0
IPR009073	Co-chaperone HscB, C-terminal oligomerisation domain	PFAM	PF07743	HSCB_C	coord: 196..266 score: 5.1
IPR009073	Co-chaperone HscB, C-terminal oligomerisation domain	unknown	SSF47144	HSC20 (HSCB), C-terminal oligomerisation domain	coord: 188..267 score: 5.89
None	No IPR available	PANTHER	PTHR14021:SF15	IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCB, MITOCHONDRIAL	coord: 18..270 score: 1.9

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
molecular_function	GO:0051087	chaperone binding