Spo10165.1 (mRNA) | SpinachBase

Overview


Name	Spo10165.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Ring finger protein, putative
Location	chr2 : 6356989 .. 6357567 (+)
Sequence length	579

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGATTCACCAAACTATCACTTTGGCCCTCCAACACTAAACGAGCAACAAGAAACAGGCCACTACAACTTAAGCATGCTCTACTGTGGATTCTTCGTGGTTGCAACTGCAGGACTTATCTTAGCAGTCTACCACTGTCTAGCTCTCAACTGGTGTGCAGACTACCCTTCTATTACATGGCCTCCTCGAAACAACAACGAAGCTCAAAGAAGCCATGCTCATCATCATCACCAGAAGATTAATGGTAGGAAACTTGTGGAGTTGGATTCAACTCTGTTTAAGTACAAAGGACAAGGTTGTGGTGGTGGTGGTAGTGGTGGTGCTGGTGGTGGTGCTGGTGGTGAAGAGTCAGAGTGTGCAGTGTGTTTGTCTGTGTATGAACAAGGGGAGGATGTTAGGGAGTTGGTTAGATGTAAGCATTCTTTTCATGCTTCTTGTATTGATATGTGGCTTTTCTCGCATTTTGATTGCCCGCTTTGTCGAGCACCGGTGGGTGTTGTTCCGGGCTGTGGCGGGCCTGCCGGGTCTGAGAATTTGGGTGCAGGTTTATCAGATTCAACTGTTCTTCCTGTATAA

mRNA sequence

ATGGGAGATTCACCAAACTATCACTTTGGCCCTCCAACACTAAACGAGCAACAAGAAACAGGCCACTACAACTTAAGCATGCTCTACTGTGGATTCTTCGTGGTTGCAACTGCAGGACTTATCTTAGCAGTCTACCACTGTCTAGCTCTCAACTGGTGTGCAGACTACCCTTCTATTACATGGCCTCCTCGAAACAACAACGAAGCTCAAAGAAGCCATGCTCATCATCATCACCAGAAGATTAATGGTAGGAAACTTGTGGAGTTGGATTCAACTCTGTTTAAGTACAAAGGACAAGGTTGTGGTGGTGGTGGTAGTGGTGGTGCTGGTGGTGGTGCTGGTGGTGAAGAGTCAGAGTGTGCAGTGTGTTTGTCTGTGTATGAACAAGGGGAGGATGTTAGGGAGTTGGTTAGATGTAAGCATTCTTTTCATGCTTCTTGTATTGATATGTGGCTTTTCTCGCATTTTGATTGCCCGCTTTGTCGAGCACCGGTGGGTGTTGTTCCGGGCTGTGGCGGGCCTGCCGGGTCTGAGAATTTGGGTGCAGGTTTATCAGATTCAACTGTTCTTCCTGTATAA

Coding sequence (CDS)

ATGGGAGATTCACCAAACTATCACTTTGGCCCTCCAACACTAAACGAGCAACAAGAAACAGGCCACTACAACTTAAGCATGCTCTACTGTGGATTCTTCGTGGTTGCAACTGCAGGACTTATCTTAGCAGTCTACCACTGTCTAGCTCTCAACTGGTGTGCAGACTACCCTTCTATTACATGGCCTCCTCGAAACAACAACGAAGCTCAAAGAAGCCATGCTCATCATCATCACCAGAAGATTAATGGTAGGAAACTTGTGGAGTTGGATTCAACTCTGTTTAAGTACAAAGGACAAGGTTGTGGTGGTGGTGGTAGTGGTGGTGCTGGTGGTGGTGCTGGTGGTGAAGAGTCAGAGTGTGCAGTGTGTTTGTCTGTGTATGAACAAGGGGAGGATGTTAGGGAGTTGGTTAGATGTAAGCATTCTTTTCATGCTTCTTGTATTGATATGTGGCTTTTCTCGCATTTTGATTGCCCGCTTTGTCGAGCACCGGTGGGTGTTGTTCCGGGCTGTGGCGGGCCTGCCGGGTCTGAGAATTTGGGTGCAGGTTTATCAGATTCAACTGTTCTTCCTGTATAA

Protein sequence

MGDSPNYHFGPPTLNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADYPSITWPPRNNNEAQRSHAHHHHQKINGRKLVELDSTLFKYKGQGCGGGGSGGAGGGAGGEESECAVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVGVVPGCGGPAGSENLGAGLSDSTVLPV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo10165	Spo10165	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo10165.1	Spo10165.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10165.1.exon.1	Spo10165.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo10165.1.CDS.1	Spo10165.1.CDS.1	CDS

Homology

[Close]

BLAST of Spo10165.1 vs. NCBI nr
Match: gi|902195904|gb|KNA12986.1| (hypothetical protein SOVF_120840 [Spinacia oleracea])

HSP 1 Score: 410.6 bits (1054), Expect = 1.500e-111
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1


		  
Query: 1   MGDSPNYHFGPPTLNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADYPSIT 60
           MGDSPNYHFGPPTLNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADYPSIT
Sbjct: 1   MGDSPNYHFGPPTLNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADYPSIT 60

Query: 61  WPPRNNNEAQRSHAHHHHQKINGRKLVELDSTLFKYKGQGCGGGGSGGAGGGAGGEESEC 120
           WPPRNNNEAQRSHAHHHHQKINGRKLVELDSTLFKYKGQGCGGGGSGGAGGGAGGEESEC
Sbjct: 61  WPPRNNNEAQRSHAHHHHQKINGRKLVELDSTLFKYKGQGCGGGGSGGAGGGAGGEESEC 120

Query: 121 AVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVGVVPGCGGPAGSENL 180
           AVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVGVVPGCGGPAGSENL
Sbjct: 121 AVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVGVVPGCGGPAGSENL 180

Query: 181 GAGLSDSTVLPV 193
           GAGLSDSTVLPV
Sbjct: 181 GAGLSDSTVLPV 192

[Close]

BLAST of Spo10165.1 vs. NCBI nr
Match: gi|731372829|ref|XP_010666459.1| (PREDICTED: RING-H2 finger protein ATL52-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 219.9 bits (559), Expect = 3.800e-54
Identity = 110/186 (59.14%), Postives = 127/186 (68.28%), Query Frame = 1


		  
Query: 1   MGDSPNYHFGPPTLNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADYPSIT 60
           M +SPNYH  P ++NEQ    HYNLSMLYCGFFV+ATAGLILA+YHC+ALNWC DYPS T
Sbjct: 1   MSNSPNYHILPASVNEQSNNAHYNLSMLYCGFFVIATAGLILAIYHCIALNWCTDYPS-T 60

Query: 61  WPPRNNNEAQRSHAHHHHQKINGRKLVELDSTLFKYKGQGCGGGGSGGAGGGAGGEESEC 120
           WP       + S A    QK+   K++ELDS +FKYKG               G +  EC
Sbjct: 61  WP-------RASEAIASDQKLKTVKVMELDSNVFKYKG---------------GEDSEEC 120

Query: 121 AVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVGVVPGCGGPAGSENL 180
            VCLSV+E+GEDVRELVRC+HSFHA CIDMWL+SHFDCPLCRAPVG      G A  +N 
Sbjct: 121 VVCLSVFEEGEDVRELVRCQHSFHAPCIDMWLYSHFDCPLCRAPVGGRCESQGVALVDNS 163

Query: 181 GAGLSD 187
           G G SD
Sbjct: 181 GPGFSD 163

[Close]

BLAST of Spo10165.1 vs. NCBI nr
Match: gi|304557181|gb|ADM35971.1| (RING zinc finger protein [Amaranthus hypochondriacus])

HSP 1 Score: 192.6 bits (488), Expect = 6.400e-46
Identity = 99/192 (51.56%), Postives = 124/192 (64.58%), Query Frame = 1


		  
Query: 1   MGDS--PNYHFGPPTLNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADYPS 60
           MGDS  PNY+  P + N+QQ + +YN+SMLYCGFFVVATAGL+LA+YHCLALNWC+DYP 
Sbjct: 1   MGDSHSPNYNLAPSSFNDQQISYNYNISMLYCGFFVVATAGLVLAIYHCLALNWCSDYPP 60

Query: 61  ITWPPRNNNEAQRSHAHHHHQKINGRKLVELDSTLFKYKGQGCGGGGSGGAGGGAGGEES 120
           + W        + +      Q+   RK++E +S  +KYK             G  G    
Sbjct: 61  V-W-------LRTAQTGPTEQQCQARKVIEFNSIRYKYKK------------GEMGTNNE 120

Query: 121 ECAVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVGVVPGCGGPAGSE 180
           EC VCLS +E+ ED+R+LV+CKHSFHA CIDMWLFSHFDCPLCRAPV V       A  +
Sbjct: 121 ECVVCLSGFEEEEDIRKLVKCKHSFHALCIDMWLFSHFDCPLCRAPVAVAVAVCSVARLD 172

Query: 181 NLGAGLSDSTVL 191
           + G+ LSDS  L
Sbjct: 181 SSGSELSDSANL 172

[Close]

BLAST of Spo10165.1 vs. NCBI nr
Match: gi|1009143623|ref|XP_015889363.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba])

HSP 1 Score: 126.3 bits (316), Expect = 5.600e-26
Identity = 72/150 (48.00%), Postives = 92/150 (61.33%), Query Frame = 1


		  
Query: 24  NLSMLYCGFFVVATAGLILAVYHCLALNWCADYPSITWP--PRNNNEAQRSHAHHHHQKI 83
           NL MLY G  VV TA +ILA+Y+ + + WC      + P  P NN   + + +    +  
Sbjct: 21  NLPMLYYGLVVVGTAAVILALYNFIIIKWCTQRHGQSTPEGPNNNPFIEMATSTMRSRSR 80

Query: 84  NGRKLVELDSTLFKYKGQGCGGGGSGGAGGGAGGEESECAVCLSVYEQGEDVRELVRCKH 143
           +  + +EL S+ FKYK +G G     G GG     + ECAVCLSV+E GE+VR+L  CKH
Sbjct: 81  SSIENLELLSS-FKYKKEGLGQEDEQGGGGVV---DYECAVCLSVFEDGEEVRKLPGCKH 140

Query: 144 SFHASCIDMWLFSHFDCPLCRAPVGVVPGC 172
           SFHASCIDMWL+SH DCPLCR PV   P C
Sbjct: 141 SFHASCIDMWLYSHSDCPLCRTPVPTGPRC 166

[Close]

BLAST of Spo10165.1 vs. NCBI nr
Match: gi|604311884|gb|EYU25878.1| (hypothetical protein MIMGU_mgv1a026706mg, partial [Erythranthe guttata])

HSP 1 Score: 122.5 bits (306), Expect = 8.200e-25
Identity = 65/166 (39.16%), Postives = 95/166 (57.23%), Query Frame = 1


		  
Query: 1   MGDSPNYHFGPPTLNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADYPSIT 60
           MGD P+ +  PP    +Q     NL MLY G  ++ TA +ILA+Y+ + + WC D  +  
Sbjct: 1   MGDPPSPYAPPPPPPPRQ-----NLPMLYYGLVIICTAAIILALYNLVIVQWCTDMTN-- 60

Query: 61  WPPRNNNEAQRSHAHHHHQKINGRKLVELDSTLFKYKGQGCGGGGSGGAGGGAGGEESEC 120
                 +  +R+       +     +  + S  FKYK +   GG            ++EC
Sbjct: 61  ----RGSRQRRAGGPTSSWRFRNSSVNPVPS--FKYKREDAEGG------------DTEC 120

Query: 121 AVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVG 167
           AVCLSV+E+GE++R++ +CKH+FHA CIDMWL+SH DCPLCR+PVG
Sbjct: 121 AVCLSVFEEGEELRQMPKCKHNFHAPCIDMWLYSHMDCPLCRSPVG 141

[Close]

BLAST of Spo10165.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R0E2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_120840 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.000e-111
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1


		  
Query: 1   MGDSPNYHFGPPTLNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADYPSIT 60
           MGDSPNYHFGPPTLNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADYPSIT
Sbjct: 1   MGDSPNYHFGPPTLNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADYPSIT 60

Query: 61  WPPRNNNEAQRSHAHHHHQKINGRKLVELDSTLFKYKGQGCGGGGSGGAGGGAGGEESEC 120
           WPPRNNNEAQRSHAHHHHQKINGRKLVELDSTLFKYKGQGCGGGGSGGAGGGAGGEESEC
Sbjct: 61  WPPRNNNEAQRSHAHHHHQKINGRKLVELDSTLFKYKGQGCGGGGSGGAGGGAGGEESEC 120

Query: 121 AVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVGVVPGCGGPAGSENL 180
           AVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVGVVPGCGGPAGSENL
Sbjct: 121 AVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVGVVPGCGGPAGSENL 180

Query: 181 GAGLSDSTVLPV 193
           GAGLSDSTVLPV
Sbjct: 181 GAGLSDSTVLPV 192

[Close]

BLAST of Spo10165.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B4J4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_002210 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.600e-54
Identity = 110/186 (59.14%), Postives = 127/186 (68.28%), Query Frame = 1


		  
Query: 1   MGDSPNYHFGPPTLNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADYPSIT 60
           M +SPNYH  P ++NEQ    HYNLSMLYCGFFV+ATAGLILA+YHC+ALNWC DYPS T
Sbjct: 1   MSNSPNYHILPASVNEQSNNAHYNLSMLYCGFFVIATAGLILAIYHCIALNWCTDYPS-T 60

Query: 61  WPPRNNNEAQRSHAHHHHQKINGRKLVELDSTLFKYKGQGCGGGGSGGAGGGAGGEESEC 120
           WP       + S A    QK+   K++ELDS +FKYKG               G +  EC
Sbjct: 61  WP-------RASEAIASDQKLKTVKVMELDSNVFKYKG---------------GEDSEEC 120

Query: 121 AVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVGVVPGCGGPAGSENL 180
            VCLSV+E+GEDVRELVRC+HSFHA CIDMWL+SHFDCPLCRAPVG      G A  +N 
Sbjct: 121 VVCLSVFEEGEDVRELVRCQHSFHAPCIDMWLYSHFDCPLCRAPVGGRCESQGVALVDNS 163

Query: 181 GAGLSD 187
           G G SD
Sbjct: 181 GPGFSD 163

[Close]

BLAST of Spo10165.1 vs. UniProtKB/TrEMBL
Match: F8RNK2_AMAHP (RING zinc finger protein OS=Amaranthus hypochondriacus PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.500e-46
Identity = 99/192 (51.56%), Postives = 124/192 (64.58%), Query Frame = 1


		  
Query: 1   MGDS--PNYHFGPPTLNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADYPS 60
           MGDS  PNY+  P + N+QQ + +YN+SMLYCGFFVVATAGL+LA+YHCLALNWC+DYP 
Sbjct: 1   MGDSHSPNYNLAPSSFNDQQISYNYNISMLYCGFFVVATAGLVLAIYHCLALNWCSDYPP 60

Query: 61  ITWPPRNNNEAQRSHAHHHHQKINGRKLVELDSTLFKYKGQGCGGGGSGGAGGGAGGEES 120
           + W        + +      Q+   RK++E +S  +KYK             G  G    
Sbjct: 61  V-W-------LRTAQTGPTEQQCQARKVIEFNSIRYKYKK------------GEMGTNNE 120

Query: 121 ECAVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVGVVPGCGGPAGSE 180
           EC VCLS +E+ ED+R+LV+CKHSFHA CIDMWLFSHFDCPLCRAPV V       A  +
Sbjct: 121 ECVVCLSGFEEEEDIRKLVKCKHSFHALCIDMWLFSHFDCPLCRAPVAVAVAVCSVARLD 172

Query: 181 NLGAGLSDSTVL 191
           + G+ LSDS  L
Sbjct: 181 SSGSELSDSANL 172

[Close]

BLAST of Spo10165.1 vs. UniProtKB/TrEMBL
Match: A0A022QF44_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a026706mg PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.700e-25
Identity = 65/166 (39.16%), Postives = 95/166 (57.23%), Query Frame = 1


		  
Query: 1   MGDSPNYHFGPPTLNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADYPSIT 60
           MGD P+ +  PP    +Q     NL MLY G  ++ TA +ILA+Y+ + + WC D  +  
Sbjct: 1   MGDPPSPYAPPPPPPPRQ-----NLPMLYYGLVIICTAAIILALYNLVIVQWCTDMTN-- 60

Query: 61  WPPRNNNEAQRSHAHHHHQKINGRKLVELDSTLFKYKGQGCGGGGSGGAGGGAGGEESEC 120
                 +  +R+       +     +  + S  FKYK +   GG            ++EC
Sbjct: 61  ----RGSRQRRAGGPTSSWRFRNSSVNPVPS--FKYKREDAEGG------------DTEC 120

Query: 121 AVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVG 167
           AVCLSV+E+GE++R++ +CKH+FHA CIDMWL+SH DCPLCR+PVG
Sbjct: 121 AVCLSVFEEGEELRQMPKCKHNFHAPCIDMWLYSHMDCPLCRSPVG 141

[Close]

BLAST of Spo10165.1 vs. UniProtKB/TrEMBL
Match: A0A061GT61_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_037571 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.800e-24
Identity = 73/176 (41.48%), Postives = 92/176 (52.27%), Query Frame = 1


		  
Query: 1   MGDSPNYHFGP--PTLNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADYPS 60
           MGD+P    GP  P L+ +      NL MLY G  VV TA ++LA+Y+ + + WC     
Sbjct: 1   MGDTP----GPSSPPLSPKS-----NLPMLYYGLVVVGTAAIVLAIYNLIIIRWCTQ--- 60

Query: 61  ITWPPRNNNEAQRSHAHHHHQKINGRKLVELDSTL---FKYKGQGCGGGGSGGAGGGAGG 120
                    +  R       +   G+        L   FKY+ +      S   G    G
Sbjct: 61  -------RRDESRQRPTRLAELTAGQSFENPSRNLLSSFKYRKE------SSNMGSQDPG 120

Query: 121 EESECAVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVGVVPGC 172
            E ECAVCLS++E GE+VR+L RCKHSFHA CIDMWL+SHFDCPLCRA V   P C
Sbjct: 121 GEYECAVCLSIFEDGEEVRQLPRCKHSFHAPCIDMWLYSHFDCPLCRASVEPSPFC 151

[Close]

BLAST of Spo10165.1 vs. ExPASy Swiss-Prot
Match: ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.200e-13
Identity = 57/174 (32.76%), Postives = 80/174 (45.98%), Query Frame = 1


		  
Query: 11  PPT--LNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADY----PSITWPPR 70
           PP+  L++   +   + S L      + T+ LIL  Y+ L   +C  +     S T    
Sbjct: 38  PPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLN 97

Query: 71  NNNEAQRSHAHHHHQKINGRKLVELDS-TLFKYKGQGCGGGGSGGAGGGAGGEESECAVC 130
           +N E   S         +G     + S T++KYK       G G   G      S+C+VC
Sbjct: 98  HNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKS------GDGFVDG------SDCSVC 157

Query: 131 LSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVGVVPGCGGPAGS 178
           LS +E+ E +R L +C H+FH  CID WL SH +CPLCRA    V G   P  S
Sbjct: 158 LSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRA---FVTGVNNPTAS 196

[Close]

BLAST of Spo10165.1 vs. ExPASy Swiss-Prot
Match: ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 9.300e-13
Identity = 56/181 (30.94%), Postives = 81/181 (44.75%), Query Frame = 1


		  
Query: 9   FGPPT---LNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWC------------ 68
           F PP    L+++ ++   + S L      +  +  IL  Y+ L   +C            
Sbjct: 37  FPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSA 96

Query: 69  -------ADYPSITWPPRNNNEAQRSHAHHHHQKINGRKLVELDSTLFK----YKGQGCG 128
                  +DY   TW   NNN    + A + +Q I G     LD +L K    YK +   
Sbjct: 97  AAINRISSDY---TWQGTNNNN--NNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMD 156

Query: 129 GGGSGGAGGGAGGEESECAVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCR 164
           G            E S+C+VCLS +++ E +R L +C H+FH  CID WL SH +CPLCR
Sbjct: 157 GFV----------ESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 202

[Close]

BLAST of Spo10165.1 vs. ExPASy Swiss-Prot
Match: ATL55_ARATH (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.200e-12
Identity = 28/48 (58.33%), Postives = 38/48 (79.17%), Query Frame = 1


		  
Query: 118 SECAVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPV 166
           +EC+VCL+ +E+ E +R L +C H+FH +CID WL SH +CPLCRAPV
Sbjct: 133 TECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPV 180

[Close]

BLAST of Spo10165.1 vs. ExPASy Swiss-Prot
Match: ATL63_ARATH (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana GN=ATL63 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.200e-12
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 1


		  
Query: 116 EESECAVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPV 166
           EE EC +CL ++E G+  R+L  C H FH  CIDMWL SH  CPLCR+PV
Sbjct: 134 EEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPV 183

[Close]

BLAST of Spo10165.1 vs. ExPASy Swiss-Prot
Match: ATL54_ARATH (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 4.600e-12
Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 1


		  
Query: 116 EESECAVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVGVV----PGC 175
           E ++C VCL+ +E+ E +R L +C H+FH SCID WL SH +CPLCRA + ++    P  
Sbjct: 173 ERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTTPRY 232

Query: 176 GGPAGSENLGAG 184
            GP      G+G
Sbjct: 233 SGPVEVTPGGSG 244

[Close]

BLAST of Spo10165.1 vs. TAIR (Arabidopsis)
Match: AT5G17600.1 (RING/U-box superfamily protein)

HSP 1 Score: 75.5 bits (184), Expect = 4.000e-14
Identity = 57/174 (32.76%), Postives = 80/174 (45.98%), Query Frame = 1


		  
Query: 11  PPT--LNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWCADY----PSITWPPR 70
           PP+  L++   +   + S L      + T+ LIL  Y+ L   +C  +     S T    
Sbjct: 38  PPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLN 97

Query: 71  NNNEAQRSHAHHHHQKINGRKLVELDS-TLFKYKGQGCGGGGSGGAGGGAGGEESECAVC 130
           +N E   S         +G     + S T++KYK       G G   G      S+C+VC
Sbjct: 98  HNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKS------GDGFVDG------SDCSVC 157

Query: 131 LSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPVGVVPGCGGPAGS 178
           LS +E+ E +R L +C H+FH  CID WL SH +CPLCRA    V G   P  S
Sbjct: 158 LSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRA---FVTGVNNPTAS 196

[Close]

BLAST of Spo10165.1 vs. TAIR (Arabidopsis)
Match: AT3G03550.1 (RING/U-box superfamily protein)

HSP 1 Score: 75.1 bits (183), Expect = 5.300e-14
Identity = 56/181 (30.94%), Postives = 81/181 (44.75%), Query Frame = 1


		  
Query: 9   FGPPT---LNEQQETGHYNLSMLYCGFFVVATAGLILAVYHCLALNWC------------ 68
           F PP    L+++ ++   + S L      +  +  IL  Y+ L   +C            
Sbjct: 37  FPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSA 96

Query: 69  -------ADYPSITWPPRNNNEAQRSHAHHHHQKINGRKLVELDSTLFK----YKGQGCG 128
                  +DY   TW   NNN    + A + +Q I G     LD +L K    YK +   
Sbjct: 97  AAINRISSDY---TWQGTNNNN--NNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMD 156

Query: 129 GGGSGGAGGGAGGEESECAVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCR 164
           G            E S+C+VCLS +++ E +R L +C H+FH  CID WL SH +CPLCR
Sbjct: 157 GFV----------ESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCR 202

[Close]

BLAST of Spo10165.1 vs. TAIR (Arabidopsis)
Match: AT4G33565.1 (RING/U-box superfamily protein)

HSP 1 Score: 74.7 bits (182), Expect = 6.900e-14
Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 1


		  
Query: 116 EESECAVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPV 166
           E ++C+VCLS +E+ E +R L +CKH+FH  CID WL SH +CPLCRAP+
Sbjct: 213 EGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPI 262

[Close]

BLAST of Spo10165.1 vs. TAIR (Arabidopsis)
Match: AT5G10380.1 (RING/U-box superfamily protein)

HSP 1 Score: 74.7 bits (182), Expect = 6.900e-14
Identity = 28/48 (58.33%), Postives = 38/48 (79.17%), Query Frame = 1


		  
Query: 118 SECAVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPV 166
           +EC+VCL+ +E+ E +R L +C H+FH +CID WL SH +CPLCRAPV
Sbjct: 133 TECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPV 180

[Close]

BLAST of Spo10165.1 vs. TAIR (Arabidopsis)
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63)

HSP 1 Score: 74.7 bits (182), Expect = 6.900e-14
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 1


		  
Query: 116 EESECAVCLSVYEQGEDVRELVRCKHSFHASCIDMWLFSHFDCPLCRAPV 166
           EE EC +CL ++E G+  R+L  C H FH  CIDMWL SH  CPLCR+PV
Sbjct: 134 EEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPV 183

The following BLAST results are available for this feature:

BLAST of Spo10165.1 vs. NCBI nr
BLAST of Spo10165.1 vs. UniProtKB/TrEMBL
BLAST of Spo10165.1 vs. ExPASy Swiss-Prot
BLAST of Spo10165.1 vs. TAIR (Arabidopsis)

BLAST of Spo10165.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902195904\|gb\|KNA12986.1\|	1.5e-111	100.	hypothetical protein SOVF_1208...	[more]
gi\|731372829\|ref\|XP_010666459.1\|	3.8e-54	59.1	PREDICTED: RING-H2 finger prot...	[more]
gi\|304557181\|gb\|ADM35971.1\|	6.4e-46	51.5	RING zinc finger protein [Amar...	[more]
gi\|1009143623\|ref\|XP_015889363.1\|	5.6e-26	48.0	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|604311884\|gb\|EYU25878.1\|	8.2e-25	39.1	hypothetical protein MIMGU_mgv...	[more]

BLAST of Spo10165.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R0E2_SPIOL	1.0e-111	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B4J4_BETVU	2.6e-54	59.1	Uncharacterized protein OS=Bet...	[more]
F8RNK2_AMAHP	4.5e-46	51.5	RING zinc finger protein OS=Am...	[more]
A0A022QF44_ERYGU	5.7e-25	39.1	Uncharacterized protein (Fragm...	[more]
A0A061GT61_THECC	4.8e-24	41.4	RING/U-box superfamily protein...	[more]

BLAST of Spo10165.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ATL52_ARATH	7.2e-13	32.7	RING-H2 finger protein ATL52 O...	[more]
ATL51_ARATH	9.3e-13	30.9	RING-H2 finger protein ATL51 O...	[more]
ATL55_ARATH	1.2e-12	58.3	E3 ubiquitin-protein ligase RI...	[more]
ATL63_ARATH	1.2e-12	58.0	RING-H2 finger protein ATL63 O...	[more]
ATL54_ARATH	4.6e-12	44.4	RING-H2 finger protein ATL54 O...	[more]

BLAST of Spo10165.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G17600.1	4.0e-14	32.7	RING/U-box superfamily protein	[more]
AT3G03550.1	5.3e-14	30.9	RING/U-box superfamily protein	[more]
AT4G33565.1	6.9e-14	58.0	RING/U-box superfamily protein	[more]
AT5G10380.1	6.9e-14	58.3	RING/U-box superfamily protein	[more]
AT5G58580.1	6.9e-14	58.0	TOXICOS EN LEVADURA 63	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 119..162 score: 7.3
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 120..161 score: 6.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 120..162 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 116..165 score: 7.0
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 24..168 score: 8.9
None	No IPR available	PANTHER	PTHR14155:SF93	SUBFAMILY NOT NAMED	coord: 24..168 score: 8.9
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 116..168 score: 6.67

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding