Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAGAGAGGAATTAACTGTACTATTGTAATCAATCAACAAGGCAACTCAGAGTAAAAAAGAAGCATCTTTAATCTTCAACACTTGTTCAGCTATTCCTGCTCACTCTCTAAATCAAACCACCAAATTTTGATTCTGATTCTCTTTAGGGTTCTTTTTCATCCCTAAATTTCTATCTCTCTTTCTCCTCGTGAATTCGGCAATGGAGATTGCAAGAAGAGCCTCCCACGCTGGTTCATGGTACACCAACAACCGTATGTTTCATCTTTCAATCTCAATAATCTCAAAAGTTATAATATTTTGTTGTTTAATCCTTTTTTTTTTTTCTGGGTTTGGTTTTGTTGTTCATATAGTCCCCCTTTAATGCTGAAAAACTGTAGTAAAACGCAAAAACTTCAACTTTGATTGAAAATTTATTCTGGGTTCAATTTAAATTTTTGGGTGTTTCTGGGAATCTGTACGTTGGAGCTGTTGTTTTGTTGCAAATATTTTGTTAAGCTGATCAGCTTATAATTTGAGAGATTAAGAAATTGGGGATGGTGATAAATTGATAATGAAATTTAGGAGCTAGTTTAAGACAATTAAGATGCTCAGATTATTGAACTTTGATATGCCTGTTAGGACAGAGAAGATCAAACTGTTGATAATCGCCATAACTGCTGTAGAATTTGATCATCTGTTCATGAAGCATTAAATTATTGTAGTAACTAGTAAGTAATTGAATTTGACATGAGTTTTTGGATTTTGCTGAAGTTAGTGTGGAACTTATGATTCCTTTCCTCTGAGTTAGTTTTGATTGTTTATGTGGGTCGAGAACATGCATTATTGCAAACTGATTTAAATTGTTTCGTCAGTCCTGCTTGATTTCTCAATTTCAAGATAGGTTCTTGTAGCAAATTGTTCCAATTAAGATTGACCATGGCGATAGAGGAGAACCACTTATGGAGCCTCTTCTTGTTCTGATCTTTTTGTTCAATCCTGCTTAATTTCTCCACTTTAAGATAGGTTGTTGTAGGCTTGTAGCAAATGGTTTCAATTAAGATTGGCTGTGTCAATATAGGAGAACCCTTTATGGATGTTTGATATACAAACAATATGTTTGGATAGGCATTTAGAAGGGAAAGTGAGGGGAGGGAAGGAGAAAACAAATTCCTATGTTTGGATAGAAAAGAGCATGATGGAAGGGAAGAAAAGGGAACATTGTTTGAGTTTATTTTGCTTTCAATTTACCCTTGCTAATTCACACATACCATCAGTGGAGGAAGTAGCCATTGAAATAGAGCTCAGAAAAACTGATCAATCAGATTTAATACTCCAAATTCACCATTGCCTTCGAATCTCCTCTCACTCCTCTAATTCCCCACAGACAGAGGTTAGGGCACCGATCAAATCGCCTTTGACCACTATCTCTCCGACATGAGTGTTAATTGCATCAAATATTTCGTCTTAATGTCGGCAACATGATTTCTTGATCAAATATGAAATTGAAAATTTTAATATGTATTGGGGAAGTATTTCGATTCTCAATTGTAGAGCAGGGGAGAGAGAAAGTGGCAAGGAATTTGTGGATGAACGAAGAATGAAGAACAAAACAAGAGAGTGAGAAATAGCTGTGGAAGAACAATGGAACTAATTAGGGTATAAGTCATTTCATCATTGTTATGCCTAATGTTTCCATTTTCCTTTCAGATATTTTCAATTTTGGAGTTTAAACAATGAAGCTAATAAATTCCCTCCCTTTCATTTCCCCCAACCCCCCAATTTGCTATCCAAACAAAGGAAAATGTATCCCTCCTCCCTCCTTTTTCCTCCAAATCCTTCTATCCAAAGAAGCTGTAAAGCAGAGGTACATATTGGAGAGATTTATCTTTGATGTTTGGCTAATGTTCTAACTCTATCATGGTGCTTGCACTAGTGATTACGATTGCCTTCTTTTTTGTGCTGAACTAGGATACATCATTCTCTTGAATACGATTCCCTTCTTTTTCCCCTCTTCGAGCAGCTCCGCCAGGCTACCTAATAGCTAGCTCTGAAAACCCGAGGTATGTAATCGCTAAAGCTCTGCTTTTTGGGGGAAGGCTAAGTCCTGGTGTTTTAGTTAGTTAGTAAATTAGGAAAAGGCGTAACTGTTCTTGTCGGAAGGGCTTTTTTTGTGGCTTTTATTATTTTAAGCTTGTGATATTTCCCAAATAGGGTGATGATTGTGAGAATGATATTGTTGATTGAATGGTTAGAAATTTGATTTCTATAATCATGCCTTGCTGTTTAAAGTCTTTCACATCTTTATTTTTTGCTTTTGTGTTTAAATATTTCATCTTTTCTAAGCAGATTTTTATGTCTCTTTTTCAGCTAGCAAGTTAGCTGAAGAACTTGAAGGCTGGCTAAATGAAGCTGGCCTCAGCAAATCTTCTGATGTCCGAGGTGTTATTGCTCCGTAAGTCTTTTTTTCACCATCATTGTAACGGCATTTTAGTACTGGGACGGATATAATCCTCACTTTTTGAAATGCCATATGATCAGGCATGCAGGATATTCATATTCGGGCCGCGCTGCAGCCTATGCATTTGGAAACATAGACCCCACAAACATGTGAGTGTTTTCTTCAAATTTCAATAGTTTATATGTATTTTCACCTTTTTATGTCTATATTATACTGAAAAGGGAAGTAAATCTTTCAGATTGATGAGAACAACAACCTAGTTATGTGATCATGCATTAAATGCTTTTTTGGGTGTGGGGGCTTACTATGTATAAGCTGCTTTTAAAGAATTTTATTGTTCCAGTTCACGAGTGTTCCTTCTGGGTCCCTCGCATCACTACTATACCCCAAAATGTGCTCTTTCAAGCGCCACTGTCTACAAGACCCCTATAGGAGATCTTCCCATTGATTTGGAAGGTATGATAAATCACTTCATACATTCTCTTCTTTTTTTTCTTATTTCCTGGAAACTTTTGCCTTGAAATATATAGATACATTGGAAAAAAAAACATATCTCCAGAAGCATGGGATACCCTTGGTTGAAGTGTACCTCTAAATATTTGCTACCTTCTTAGGTTTCCTAAGAAACTTGCTAGAAAACTAAATAACCTAAAGGGTGTTGATTTTGCTAAGAAAAAAAAAAAATCCCATATCCAAGGAAATATTGGTGCCCCCTGACCATATATTCTTTATTTATTTTTAATAACTTATATTTGGGGATCGAAATTAGTTTTGAACCTCTTTGATGGACTGATGGAACTGGAATAGTAATGGTGTTGTTTTGAACCTCCCTAACGCGTATCTTGTGAATTTTATGGAAGGCTGGTCTATGTGGGGGGGTGGGTTCTGACTTCTGAGGGCGTAGAAGTAGAATCGCTGGAGGTTTTCGGAAAAGGAATTTGTGTAACACCATCTTTTCAATATTCTTTGGCTAACTTGTTTGCTTGGATGGTTTCCAAGAGTTGTTGTCATTTTAATTTTTTCGCACTTGCCGTTTCTATACCTTGTGTCAAATTTCTCACATAAGAATATATTAATATATGCTTGTGTGTATTCACATTTGTATCCTCTTTCTTTTTCAACCAGTCATTGAGGAGCTTAAGGCAACTGGGGAATTTGAAATGATGGATATTCGGGTTGACGAGGCTGAACACAGCATGGAGATGCACTTGCCTTATCTTGCTAAAGTATTTGAAGGGTACCTTTTATTTATATGTCAGTCCCTTCCATGGACCAAACTATCTGCTTTGTCGAGTCTCATCATCTGATAATAATAATATTGCAGACATCCAGTAAAAGTTGTTCCCATCTTAGTTGGTGCTGTTGGTGCCGAAAGTGAAGCGATGTACGGTCAATTGCTGGCTAAATATATTGATGATCCCAGTAATTTTTTCTCAGTATCGTCGGACTTCTGTCACTGGGGGTCTCGGTATGTCCATTCACCCGTTTCTTACTTCACTTTTGCTGAATATGATGCAGGATTTTTCTCATTAATTTTATCCTTGAGTCTGTTTCTAAATACTTATAGCACGTAGTTTTTCTTCCTTGGTTTAGCTTCAACTACACTTACTATGACAAGAAGCATGGAGCCATCCACAAGTCTATTGAAGCATTGGATCATATGGGGATGGATATTATAGAAACAGGAGATCCAGATGCATTCAAGAAGTATTTATCCAAATATGACAACACTATTTGTGGTCGTCATCCAATTAGTGTTTTCCTTCATGTAAGTCCCTGTTATGAGTATTACTTCATCTTGGTGGCAGTTCCTTTTTCTTCTCTTTTATATTACTGCTAAGATATCAGTCTTAATGCTTGATGTATCGCTTCACTGTCTACTTTCTCTTATTATCTATATCTTTGAATTTTTCAGATGTTGACGAGTTCTTCAACGAAGATAAAGATTAAATTCTTGCGGTATGAACAGTCAAGCCAATGCAAGAGCATGAGAGACAGTAGCGTAAGTTATGCTTCAGCTGCAGCCAAGGTAGAAGATTGAAACCTCAAGGACTAGCCACCCATCTCCTGCTATATGCATTTTAGGTTGTTTTGGAAGTCTGTTATCTGTTCATACTTTATTTCTAACCTTCCTTTTTCAAAGCCAGAACTCAGTTTCCATTTGTACTGCAGTTGAAAGGTTTATCATCAATAATGAAATTTTTTCCAGAAACTGGAGTATCTATTAATTTTGGTTTATATCAGTTCCTGCAAAAAGATAAGAAATTTTCAGATAGCTGCATCTGTTGGAACCTTGCTGGATTGGTGCATTCGCAGAATTATTCAGCAGACAAGTAAAGCTGAACTCGAATATACCATCTGGCTCGGTAGAACTGTGTCTGTGTAGCAGCTCAGAATGTTTACAACATTTGTTATTTTGTTATTTTGTACGGAGTACTACTATTACCAAACTCAACTTCTAGATGAAATTACAAGTTTATCATCCATGAAACAAGTAGAATGTCATTCTTCCAAAATAAAATACACTATATATCAG GTAGAGAGGAATTAACTGTACTATTGTAATCAATCAACAAGGCAACTCAGAGTAAAAAAGAAGCATCTTTAATCTTCAACACTTGTTCAGCTATTCCTGCTCACTCTCTAAATCAAACCACCAAATTTTGATTCTGATTCTCTTTAGGGTTCTTTTTCATCCCTAAATTTCTATCTCTCTTTCTCCTCGTGAATTCGGCAATGGAGATTGCAAGAAGAGCCTCCCACGCTGGTTCATGGTACACCAACAACCCTAGCAAGTTAGCTGAAGAACTTGAAGGCTGGCTAAATGAAGCTGGCCTCAGCAAATCTTCTGATGTCCGAGGTGTTATTGCTCCGCATGCAGGATATTCATATTCGGGCCGCGCTGCAGCCTATGCATTTGGAAACATAGACCCCACAAACATTTCACGAGTGTTCCTTCTGGGTCCCTCGCATCACTACTATACCCCAAAATGTGCTCTTTCAAGCGCCACTGTCTACAAGACCCCTATAGGAGATCTTCCCATTGATTTGGAAGTCATTGAGGAGCTTAAGGCAACTGGGGAATTTGAAATGATGGATATTCGGGTTGACGAGGCTGAACACAGCATGGAGATGCACTTGCCTTATCTTGCTAAAGTATTTGAAGGACATCCAGTAAAAGTTGTTCCCATCTTAGTTGGTGCTGTTGGTGCCGAAAGTGAAGCGATGTACGGTCAATTGCTGGCTAAATATATTGATGATCCCAGTAATTTTTTCTCAGTATCGTCGGACTTCTGTCACTGGGGGTCTCGCTTCAACTACACTTACTATGACAAGAAGCATGGAGCCATCCACAAGTCTATTGAAGCATTGGATCATATGGGGATGGATATTATAGAAACAGGAGATCCAGATGCATTCAAGAAGTATTTATCCAAATATGACAACACTATTTGTGGTCGTCATCCAATTAGTGTTTTCCTTCATATGTTGACGAGTTCTTCAACGAAGATAAAGATTAAATTCTTGCGGTATGAACAGTCAAGCCAATGCAAGAGCATGAGAGACAGTAGCGTAAGTTATGCTTCAGCTGCAGCCAAGGTAGAAGATTGAAACCTCAAGGACTAGCCACCCATCTCCTGCTATATGCATTTTAGGTTGTTTTGGAAGTCTGTTATCTGTTCATACTTTATTTCTAACCTTCCTTTTTCAAAGCCAGAACTCAGTTTCCATTTGTACTGCAGTTGAAAGGTTTATCATCAATAATGAAATTTTTTCCAGAAACTGGAGTATCTATTAATTTTGGTTTATATCAGTTCCTGCAAAAAGATAAGAAATTTTCAGATAGCTGCATCTGTTGGAACCTTGCTGGATTGGTGCATTCGCAGAATTATTCAGCAGACAAGTAAAGCTGAACTCGAATATACCATCTGGCTCGGTAGAACTGTGTCTGTGTAGCAGCTCAGAATGTTTACAACATTTGTTATTTTGTTATTTTGTACGGAGTACTACTATTACCAAACTCAACTTCTAGATGAAATTACAAGTTTATCATCCATGAAACAAGTAGAATGTCATTCTTCCAAAATAAAATACACTATATATCAG ATGGAGATTGCAAGAAGAGCCTCCCACGCTGGTTCATGGTACACCAACAACCCTAGCAAGTTAGCTGAAGAACTTGAAGGCTGGCTAAATGAAGCTGGCCTCAGCAAATCTTCTGATGTCCGAGGTGTTATTGCTCCGCATGCAGGATATTCATATTCGGGCCGCGCTGCAGCCTATGCATTTGGAAACATAGACCCCACAAACATTTCACGAGTGTTCCTTCTGGGTCCCTCGCATCACTACTATACCCCAAAATGTGCTCTTTCAAGCGCCACTGTCTACAAGACCCCTATAGGAGATCTTCCCATTGATTTGGAAGTCATTGAGGAGCTTAAGGCAACTGGGGAATTTGAAATGATGGATATTCGGGTTGACGAGGCTGAACACAGCATGGAGATGCACTTGCCTTATCTTGCTAAAGTATTTGAAGGACATCCAGTAAAAGTTGTTCCCATCTTAGTTGGTGCTGTTGGTGCCGAAAGTGAAGCGATGTACGGTCAATTGCTGGCTAAATATATTGATGATCCCAGTAATTTTTTCTCAGTATCGTCGGACTTCTGTCACTGGGGGTCTCGCTTCAACTACACTTACTATGACAAGAAGCATGGAGCCATCCACAAGTCTATTGAAGCATTGGATCATATGGGGATGGATATTATAGAAACAGGAGATCCAGATGCATTCAAGAAGTATTTATCCAAATATGACAACACTATTTGTGGTCGTCATCCAATTAGTGTTTTCCTTCATATGTTGACGAGTTCTTCAACGAAGATAAAGATTAAATTCTTGCGGTATGAACAGTCAAGCCAATGCAAGAGCATGAGAGACAGTAGCGTAAGTTATGCTTCAGCTGCAGCCAAGGTAGAAGATTGA MEIARRASHAGSWYTNNPSKLAEELEGWLNEAGLSKSSDVRGVIAPHAGYSYSGRAAAYAFGNIDPTNISRVFLLGPSHHYYTPKCALSSATVYKTPIGDLPIDLEVIEELKATGEFEMMDIRVDEAEHSMEMHLPYLAKVFEGHPVKVVPILVGAVGAESEAMYGQLLAKYIDDPSNFFSVSSDFCHWGSRFNYTYYDKKHGAIHKSIEALDHMGMDIIETGDPDAFKKYLSKYDNTICGRHPISVFLHMLTSSSTKIKIKFLRYEQSSQCKSMRDSSVSYASAAAKVED Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo09583.1 vs. NCBI nr
Match: gi|902201180|gb|KNA13926.1| (hypothetical protein SOVF_112190 [Spinacia oleracea]) HSP 1 Score: 587.8 bits (1514), Expect = 1.000e-164 Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 1
BLAST of Spo09583.1 vs. NCBI nr
Match: gi|731316753|ref|XP_010665633.1| (PREDICTED: protein MEMO1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 560.1 bits (1442), Expect = 2.300e-156 Identity = 273/290 (94.14%), Postives = 282/290 (97.24%), Query Frame = 1
BLAST of Spo09583.1 vs. NCBI nr
Match: gi|823228705|ref|XP_012447095.1| (PREDICTED: protein MEMO1-like [Gossypium raimondii]) HSP 1 Score: 532.3 bits (1370), Expect = 5.200e-148 Identity = 258/290 (88.97%), Postives = 277/290 (95.52%), Query Frame = 1
BLAST of Spo09583.1 vs. NCBI nr
Match: gi|823238492|ref|XP_012451899.1| (PREDICTED: protein MEMO1-like [Gossypium raimondii]) HSP 1 Score: 531.9 bits (1369), Expect = 6.800e-148 Identity = 255/290 (87.93%), Postives = 279/290 (96.21%), Query Frame = 1
BLAST of Spo09583.1 vs. NCBI nr
Match: gi|1009136988|ref|XP_015885816.1| (PREDICTED: protein MEMO1 [Ziziphus jujuba]) HSP 1 Score: 531.6 bits (1368), Expect = 8.800e-148 Identity = 256/290 (88.28%), Postives = 274/290 (94.48%), Query Frame = 1
BLAST of Spo09583.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R330_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_112190 PE=3 SV=1) HSP 1 Score: 587.8 bits (1514), Expect = 7.200e-165 Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 1
BLAST of Spo09583.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D496_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g030850 PE=3 SV=1) HSP 1 Score: 560.1 bits (1442), Expect = 1.600e-156 Identity = 273/290 (94.14%), Postives = 282/290 (97.24%), Query Frame = 1
BLAST of Spo09583.1 vs. UniProtKB/TrEMBL
Match: A0A0D2UH63_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G059800 PE=3 SV=1) HSP 1 Score: 532.3 bits (1370), Expect = 3.600e-148 Identity = 258/290 (88.97%), Postives = 277/290 (95.52%), Query Frame = 1
BLAST of Spo09583.1 vs. UniProtKB/TrEMBL
Match: A0A0D2UCS0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G116600 PE=3 SV=1) HSP 1 Score: 531.9 bits (1369), Expect = 4.700e-148 Identity = 255/290 (87.93%), Postives = 279/290 (96.21%), Query Frame = 1
BLAST of Spo09583.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MME0_GOSAR (Protein MEMO1 OS=Gossypium arboreum GN=F383_23020 PE=3 SV=1) HSP 1 Score: 531.9 bits (1369), Expect = 4.700e-148 Identity = 255/290 (87.93%), Postives = 279/290 (96.21%), Query Frame = 1
BLAST of Spo09583.1 vs. ExPASy Swiss-Prot
Match: MEMO1_XENTR (Protein MEMO1 OS=Xenopus tropicalis GN=memo1 PE=2 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 8.100e-85 Identity = 156/292 (53.42%), Postives = 200/292 (68.49%), Query Frame = 1
BLAST of Spo09583.1 vs. ExPASy Swiss-Prot
Match: MEMO1_DANRE (Protein MEMO1 OS=Danio rerio GN=memo1 PE=2 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 1.100e-84 Identity = 158/289 (54.67%), Postives = 197/289 (68.17%), Query Frame = 1
BLAST of Spo09583.1 vs. ExPASy Swiss-Prot
Match: MEMO1_XENLA (Protein MEMO1 OS=Xenopus laevis GN=memo1 PE=2 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 1.800e-84 Identity = 154/292 (52.74%), Postives = 200/292 (68.49%), Query Frame = 1
BLAST of Spo09583.1 vs. ExPASy Swiss-Prot
Match: MEMO1_RAT (Protein MEMO1 OS=Rattus norvegicus GN=Memo1 PE=1 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 1.800e-84 Identity = 155/292 (53.08%), Postives = 199/292 (68.15%), Query Frame = 1
BLAST of Spo09583.1 vs. ExPASy Swiss-Prot
Match: MEMO1_MOUSE (Protein MEMO1 OS=Mus musculus GN=Memo1 PE=1 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 4.000e-84 Identity = 154/292 (52.74%), Postives = 199/292 (68.15%), Query Frame = 1
BLAST of Spo09583.1 vs. TAIR (Arabidopsis)
Match: AT2G25280.1 (UPF0103/Mediator of ErbB2-driven cell motility (Memo), related (InterPro:IPR002737)) HSP 1 Score: 492.7 bits (1267), Expect = 1.600e-139 Identity = 234/290 (80.69%), Postives = 266/290 (91.72%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo09583.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo09583.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo09583.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo09583.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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