Spo09428.1 (mRNA)

Overview
NameSpo09428.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionUPF0161 protein At3g09310
Locationchr5 : 24728692 .. 24735692 (-)
Sequence length1395
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCAACAACCAAATTAGACAGTGCTCTAGTAGAACCCAAAAAAATGGCGGCTATTCAATCTCTAACTTTCTTCCGCTTCCATTCTTCTTCAGATATTTATCCTCTATCTTTAAGCTCTTCCCCTTCCCTTAAATTCCCTAAACACATCAAAATTTACAACTCCCAGCTGCACAATTTCCCCACTTCAGTAAGTTCAATTTTTGCACAGTATTAAAAAAATATGACTGTTGATGATTTTTTTAACAATTTTCTCAATCTTCAGCAAATGAGTTTTCTTTATTTCTTTATTTAACTACTTGTATTTTAAACACAGAGTAAAAAGTTTCAGCGACGTTTCTCTCCAATTTTGAATAAAATTGAGCCTGACCCAGATGAGGAAGAGGAAGTGCAGCAGAGTACAGGAGTTAAAGCTGCATTATCAATGCTTAATTTCTACAAGAGTGAGTGTTTTTTACACTTTGATTAATTTGTGTTGAATTGGGTTTAATTTTTTCAAATTAATGATAGAAATTAATTAGGGTTTTCAATTTCTGTATTACGAAATGAAATTTATATATTTTGCAATTTGAAATGGCAGGAGAAATATCACCATTGATGCCAAAGAGTTGCCGTTATGTGCCGTCTTGTAGCGAATATTCGATGATTGCTTACAAGAAATATGGGGTTGCTAAGGGTACTATCTTGACTGCTTGGCGCCTTTGTCGCTGCAACCCGCTTGGTATACTTATTTTTATCTGTCTTCTTTAGCTGCATTGGTTTGATTTACTCTCAAATATGCTCCTTGGTCTGATATATAGTCTCGTTGTTAGTGTATCGAGAACAAACTAGTAATGTGACAATTAAATCTTGGCGGATGGAGTGTAGGTGTAAGAATGGTATGGAAAAATCCCTCCTACTCCGCACATAGTTGGGAATATAAACTTCAATAGTACTATTTGGCATAAGCACTCCAGAGTCCAGAGTGTTTAAGTTAACTTCATCTGTTTGATCGAATTGTATAGTTTAAGTCTATTTTTAGAAAAGTACTACTCCCTCCGTCCCGGAATACTTGACCTGTTTTCCTTATCGGGCCGTCCCTTAATACTTGACCTGTTTCTAAAAATGGAAATATTCTAACAATATTATATTATTTCTCATTCCACCCCTATTAACCCACCTACCCCCTACTCCATACAAAAAATAATTAAAAATTCAACCCCTACTCTCTCTCAACCCCACATCTTAACACATTTCCCACTAACTACATTAAAATAATACCCCACTATCAACTACTACCTATTAAATTAAATAAGTCAATTCAAGTATCTTAAACTCTTAAACTCTGTGCCGGTCAAACCGGGTCGAGTATTCCAGGACGAAGGGAGTACAATTTCTATATTTGGAGGTGATAGAAGCTTCTAGGCTTTCGAGAAAAATAATCTAGGCTTTACTTTATTGTAGCTTTAGTTAGAGAGCTATGGCGGGATCCTAGTGATGATTCGTGTTCACTGGTGAGGTCTGGCCTTTTGACTGTGTTATTGATCCCTTGGTGTGCTTACTATCCAAGTGTCTAGTTATGTTTCCATGTTTACTAGGTTTTTATTTTGTATTTTTTACTTTAGTTTTTACCTTATCTTCAAATGTCAAATGCTTGAGGGATATTCTTTTTTGGCAACTAAAGTTGTACTGTTATAAAAAAAAAAACAGAATGAGTTTAAGTAAAAACAGCAATAGCTGCACCACAAATACACTGCCACGATCTAAGCTACAAGCTTACTAAAACATCAAAACATGAAGTAAAGTCAATCAACTAACCGATCGATCTGAGGATGTACAGGCTGTTCTGAAGATTATCTCTCTGAACACTTGATCTTCAGTCTGGCTCTTAGCAGCAAAAATCCTCTGGTTTCTCTGAATCCGCAAGCAATATACAGCTTCAGTAAATAAAGCTAAAAATTTCTTGCTCACTGTTCTGTTAATATTAACAGCTGTAGGCTGCAGCGCACTGTAGATCAAACAGTCTTAGAAATATTTGGCTCCAATAACTTTACAGACTAAATTCATAAGTAAGTGATGCAGATTTTTTCAATTTCTCTAATAACCTTTTTGGGTACTGTTGCGCTCACCTCTAGTGGCGGCCCAATCTGATGTTGGGATATAACCTCATAGTAGGGGTAACACAATGGTGTAGGAAACCTAGGGATTCTTATGCTTTTGAAATGCTTCAAAGTAGCTATGATGATTCATCTGGTTTGCACAGCTTTGCTAATTTGAAATTGTCTACTTAGGCACTTAGCTATGAAGTATACACAATTTCCTTTGCTGATGACAAATTAGTTCTTCTGATCAGGTTGGTTTTATTGAGCTCACTGATTACGGCTTTGCTGTTCCTTTGGTCCTTTAAGCTTGCTAGGTTGTGTAAAAAAGTCATAGCTCTTAAGGATTAAGCTCATAAGTTGACTTTTCTTAGACTGATCACACACTGAATGTCAGACTGTAATTGGACCCAAGGTTTGTACTAAATCAGTGTTTCTGTTCCACTGAAAGTAAAAAGAACACACATCCTACTTTAGCATTTCGGTTGTAGCTCACGTGCATGATGCCTTACCTCTGCTTGCTTGAGGTTGCATTGTTAGTTTTGTTACTGTGTCTGGAAGTTGTGGAAGTAGCTACAGTGAATCACCTACGCTACATAGCTTTGCTAAGTGGAAATGGTCTGGTTAGACACTTAGCTGTGCAATCCTCAAATTAGATTAGCTCCATTGAGCTCTCTAATACGACTTTGCTTGCTAGCTTGTTTAAGATGTCATCGCTCTTAAGGTTAAGTTTATAAGTTCACTTTTTGTACACTAAACACACGATCATTGTCAAAATGTAATTAGAGCTAGGGTTTGACTGTAATCAGTGTTTCCTATCCTTCGCATGGAACTAATCATTAAAATAGCCTCAGGTAAATCTTTATCTTATTTTAGACCCACTAAGTCACCTTGAGATTATTAACTAATACAATAATACTCCATCCATCTCATAATAGTGTGCCCCTTTCTTTTTGCACATTGTTTTAGGTAATTACTTGTAGTGTGATTATCAACTGTTTTAGGTAATTACTTGATGTGATGAGAGAGAGTGCAGTATTTTTTTTGGTTGAATGTGAGAGTGTGTTTTCCCATCACTTTAGGTAGTGGGATGAGAGAAGTACTCCCTCCGTCCCAACTTAATCGTCGCGCTATGCGATAAGTTATGGTAGGCTTATCTTTTAAAAGTAGATGTTATGAGAGATAATAGAAGAACTATTTTGATTGAATGAGAGAGAATATGTGGCCATAACTTAAAATATTAGTGGCCCATGCCATAAAAGGAAGTGTGGACGTAAATTTGGAGGAAGTATGGAGTATTAAAAAAATTAGTGGACTCTTGTCAAAATAGAAAGGGGGAAATTAAATTGGGACAAAAACAAAAGGAAAGTGGGGACACTAAATTGGGATAAAGGGAGTACAACATTTTTGCAAAATTAAGCTTAGTTAATCAAAATTGTAAGATTGATCGAGTTTACCGGCAAAACATTCGATAATACATGATAAAAGTTCAAAGACTGTAAATTGTGCCCCCATCCATTAGTAATATTAACGGTTACCTAATTACATACCTTTCAAGTATCATTATCAATTTAAAATAATTAAGTGATACTCCCTCTGTTCCATATTAGTTTTTTTACACTTCTATTTTTTTTGGGAAAGACCCCACAATTTTAATACCTCTCATTTTCCACTACCAAGAAGTTAGGATCTTACACTATCTCACGTTCGAATTAAAAAAATACTACCCTGTCTTCTTTCACATCTACTTTTTCTATAAGATAATACCTCATTGTCTCCTTTCACGTCTATTTTTTAATAAAATCAATACTATATATTAAAAGGCGTTTCTACAAATGTCTACATGTCACGTGTCGCTCTTCCTCAATCCAAATGTCCATGTTATCAATCCATTTTCACTTAAAAAATGAAATATGGTTTGCATAAGATCAAACCTGCGACCTGCAATTGAGCATTATCCAATTGAGCTATAATATTTTACATGTTATATTTGTAAAATTAATATCAATACAATATAGAATAATGATCTTGTGAAAATAAATTCAAACGTAATTTCATTAAAGAATATAATAATTAATTGTTCTTCACATAATACTTCGGGGCATCGCCAGGGCCCAACTACTTATACTTTACAAAAGCTTTGATAACCCAACTACTAGTAATATTTGATAACCAACCAACTTATCTTCTAAAACTTTGTGCCATGAGGCCCCTGACAAGTGTCAAAACTATGAGGGAGTATTAATTTGTAGCCTAAAATCGTTTTATGTAATATATATGCAAAGAAACTACAAGGAACAGGTAAAAGGACCCGGTAACTTAGACCCAAATGATTCACATTTGAACTACTTTTTCATCTTATGGTGCAGTCGTGGAAAGAGCATGCTTTTGTGCAATGGTAAAGATAACGATACTTCAATATATCAATTTGTTTCGGCTTTATAAATTGTGTTCCTAACTGATCTAGTTAGTTAAATAAGTGTTAAGCTATGTCACTTACATTCTATAGTTGTTTCAATGGATTAAAACAAAGGAACTAAAACAGTAAAGTGGCTGAAATACATTGCAAATTGAGACATTATTGTTTAAAGGTGTGCTTATTTACATGTATTTATTAAAGGTGTGCGTGTGCTTTACTTATTATATACTTTGCAAAAGCTTACTTCTTATGTATATTTCAGGTGGATCCGGCTTTGATCCCCCAAGATGGTTTGGCGAAGAGAGGGCATCAGAGGAGTGAAACCTTTGATTGTCTTCATACAAATAGGTAATTTTTATTTCCTATACCATTTAAATTTAGTTGGCTGACACTTAGCCAAATACCCTTACTATGCGTGTATTAGTTTTATGCGGAGATCGAACCTGTGTAGCTGCGTGTTCTTGATATAATTTTTGTCATGCGTAATGCAAAAGGTAGTTTACTTGTACGAAGTATGCGTGAAAAAAATGCTTAAAAGGGACGCTAGTATTATCTGGACGCTAATTTTATTTTGTGTGATATATCATCAAAGTTATCAGGAACTTAAGATGAATCCTTTGTTCCCTTTCAGTAGTTTGACTAGAGTGAAAACTGAAAATTTGTGGAAAGATAAATAAAATAAAAACAGAAATAAGTTGATTGAGATTGAAATGAAGGGAAAAGAAGGTCAAGTAATTAGCATCTCCCATAGGACAATTCCAGAGTATATAATATCACCAATCAGTTGCTTCAGAAAATTATATGCAGACTGAAACAATATTTCTGTTTGTGGGTTATGGAGGTGTCGAAGAGGTTTTGGACACTTCTTAAAATTTTGGAATGCTTTTGTCCTTAAGATTCATAAAAATGTATGGTTAATAATCTTATTTGCCGTAATTGTGCAAGCTTAAGGTAAATGTGACATCATTGTTTTCTTCTTGTGGAGATAATTGATAAAGGGAATAAAATTAAGGTCATTGAACTAGTATTCCTTTATCAACAAATTAAACCAACCAATGATTATAATGGTCAGTAAAGGTCGTATCTACTAGCTTGGAGTTGTGAACTTCGTAGGAAAGTGTGAACCATAAGCTAGTTTGGATAAGGGGTTTCGTTTTGAAAAGAGTCACAAAAGAGGATTATTGATTTATTGTTTTAAAAAGAAGTTCAAGGTTTAAAAAAATCTAGGGGTTAGAATTTCAAATAGGGATAAAGAGGGAAGCTAGGAAATACATCAATACTATATATTAAAAGATATTTCTAAGAAAGTTTTATATGACATATGTGGCGTTCTGCTTATGAGTGTCATTAATTTCATGTAATCTTCCAATACATAATTTTTTTGTCAAATATGGTTGCATAATGTTTGACCCCCAACCTTGAGTTTAAACATTAAAGCCTTCACCACTAAGACATGACACGTTTCATGTTATTATTGCGAAAAAAAATAAGTAAATACAATTGTTATTAGTGTAGCAACCCGGGGCATCCTCCGGACCTAAAAATTAGTTGAGAATTAAAAACCATCAAAAACCATCGAGCATACTGTTGGTATACACTCACCTATTACTACTGCTAATCTTATTCTTTCTTCTGTACTACATAACGTCAAAGCAAGGAGCAGCAGTGCAAGCAGCAACAACAATGATCATGTTCAACCAGCAGTACAACATTCTAGAAGCTTCCCACATGATCAGTTTCATCACACACCTACAGCTCTAACAACTTGCCTTAAATCTAGGGAGTCAGTTAGTCATTCTGTTAGGCTGCATCCTTGTGTACATATAGAGTGCTCTCATTGGATGCAACACATCATCCTTAGAATGTATATATATTATTCTTGCTGTACGAATTCAATCATAAATCAAATAATAGAATTCTGTTTGATCAAGTTCTTAGAACTCTCTCTCTCTCAAAGTTTACTGTAATACAGTTTTAGCAAAGAAATCAACCTAAGTGTTGATTTCTAATACATACCAACTGCTTGTTGGTTCAGTGCGTGTTCGATCCCCCACAGTAACAACTTGGAGGGGACTGGAACCTAACCACCCTAACTCGCCCCGAATCCGGATTAGCCCTAAGGGTAAACTGGGTGTTGACACCAAAAAAAAAAAAAGAAAAAAAAAACCATCAAACATAAACCAAACAGCTAGATTAAGCAAGTCCGCCCTAGTCACCTCTTTCGACTTAATTAGGCAGTAAAATTATCAAATTGAACGGTCTAGACTTTTATTAGACGACAATAATCATGCAAGATTATAGACTAATCCGGAACATAGGGATAAGGTTCAACTTAATGAATGACCATGAAACAAAGTCAGAGGCATCAAGCATACATCAATTTGTGCACTATTGAAGTATTGAACAAGCAAACACCCTAAGTTTTCAACGATTTACTTGAAAACTCCCCAACAAAAGTCCCAAGTCAACCCGTAACAAAGACAACCAGGCTTCCAACCAACCCCCA

mRNA sequence

AAGCAACAACCAAATTAGACAGTGCTCTAGTAGAACCCAAAAAAATGGCGGCTATTCAATCTCTAACTTTCTTCCGCTTCCATTCTTCTTCAGATATTTATCCTCTATCTTTAAGCTCTTCCCCTTCCCTTAAATTCCCTAAACACATCAAAATTTACAACTCCCAGCTGCACAATTTCCCCACTTCAAGTAAAAAGTTTCAGCGACGTTTCTCTCCAATTTTGAATAAAATTGAGCCTGACCCAGATGAGGAAGAGGAAGTGCAGCAGAGTACAGGAGTTAAAGCTGCATTATCAATGCTTAATTTCTACAAGAGAGAAATATCACCATTGATGCCAAAGAGTTGCCGTTATGTGCCGTCTTGTAGCGAATATTCGATGATTGCTTACAAGAAATATGGGGTTGCTAAGGGTACTATCTTGACTGCTTGGCGCCTTTGTCGCTGCAACCCGCTTGGTGGATCCGGCTTTGATCCCCCAAGATGGTTTGGCGAAGAGAGGGCATCAGAGGAGTGAAACCTTTGATTGTCTTCATACAAATAGCAAGGAGCAGCAGTGCAAGCAGCAACAACAATGATCATGTTCAACCAGCAGTACAACATTCTAGAAGCTTCCCACATGATCAGTTTCATCACACACCTACAGCTCTAACAACTTGCCTTAAATCTAGGGAGTCAGTTAGTCATTCTGTTAGGCTGCATCCTTGTGTACATATAGAGTGCTCTCATTGGATGCAACACATCATCCTTAGAATGTATATATATTATTCTTGCTGTACGAATTCAATCATAAATCAAATAATAGAATTCTGTTTGATCAAGTTCTTAGAACTCTCTCTCTCTCAAAGTTTACTGTAATACAGTTTTAGCAAAGAAATCAACCTAAGTGTTGATTTCTAATACATACCAACTGCTTGTTGGTTCAGTGCGTGTTCGATCCCCCACAGTAACAACTTGGAGGGGACTGGAACCTAACCACCCTAACTCGCCCCGAATCCGGATTAGCCCTAAGGGTAAACTGGGTGTTGACACCAAAAAAAAAAAAAGAAAAAAAAAACCATCAAACATAAACCAAACAGCTAGATTAAGCAAGTCCGCCCTAGTCACCTCTTTCGACTTAATTAGGCAGTAAAATTATCAAATTGAACGGTCTAGACTTTTATTAGACGACAATAATCATGCAAGATTATAGACTAATCCGGAACATAGGGATAAGGTTCAACTTAATGAATGACCATGAAACAAAGTCAGAGGCATCAAGCATACATCAATTTGTGCACTATTGAAGTATTGAACAAGCAAACACCCTAAGTTTTCAACGATTTACTTGAAAACTCCCCAACAAAAGTCCCAAGTCAACCCGTAACAAAGACAACCAGGCTTCCAACCAACCCCCA

Coding sequence (CDS)

ATGGCGGCTATTCAATCTCTAACTTTCTTCCGCTTCCATTCTTCTTCAGATATTTATCCTCTATCTTTAAGCTCTTCCCCTTCCCTTAAATTCCCTAAACACATCAAAATTTACAACTCCCAGCTGCACAATTTCCCCACTTCAAGTAAAAAGTTTCAGCGACGTTTCTCTCCAATTTTGAATAAAATTGAGCCTGACCCAGATGAGGAAGAGGAAGTGCAGCAGAGTACAGGAGTTAAAGCTGCATTATCAATGCTTAATTTCTACAAGAGAGAAATATCACCATTGATGCCAAAGAGTTGCCGTTATGTGCCGTCTTGTAGCGAATATTCGATGATTGCTTACAAGAAATATGGGGTTGCTAAGGGTACTATCTTGACTGCTTGGCGCCTTTGTCGCTGCAACCCGCTTGGTGGATCCGGCTTTGATCCCCCAAGATGGTTTGGCGAAGAGAGGGCATCAGAGGAGTGA

Protein sequence

MAAIQSLTFFRFHSSSDIYPLSLSSSPSLKFPKHIKIYNSQLHNFPTSSKKFQRRFSPILNKIEPDPDEEEEVQQSTGVKAALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFGEERASEE
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo09428Spo09428gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo09428.1Spo09428.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo09428.1.utr5p.1Spo09428.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo09428.1.CDS.4Spo09428.1.CDS.4CDS
Spo09428.1.CDS.3Spo09428.1.CDS.3CDS
Spo09428.1.CDS.2Spo09428.1.CDS.2CDS
Spo09428.1.CDS.1Spo09428.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo09428.1.utr3p.2Spo09428.1.utr3p.2three_prime_UTR
Spo09428.1.utr3p.1Spo09428.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo09428.1.exon.5Spo09428.1.exon.5exon
Spo09428.1.exon.4Spo09428.1.exon.4exon
Spo09428.1.exon.3Spo09428.1.exon.3exon
Spo09428.1.exon.2Spo09428.1.exon.2exon
Spo09428.1.exon.1Spo09428.1.exon.1exon


Homology
[Close]
BLAST of Spo09428.1 vs. NCBI nr
Match: gi|902226590|gb|KNA20420.1| (hypothetical protein SOVF_052590 [Spinacia oleracea])

HSP 1 Score: 321.6 bits (823), Expect = 7.400e-85
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1 

		  

Query: 1   MAAIQSLTFFRFHSSSDIYPLSLSSSPSLKFPKHIKIYNSQLHNFPTSSKKFQRRFSPIL 60
           MAAIQSLTFFRFHSSSDIYPLSLSSSPSLKFPKHIKIYNSQLHNFPTSSKKFQRRFSPIL
Sbjct: 1   MAAIQSLTFFRFHSSSDIYPLSLSSSPSLKFPKHIKIYNSQLHNFPTSSKKFQRRFSPIL 60

Query: 61  NKIEPDPDEEEEVQQSTGVKAALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGV 120
           NKIEPDPDEEEEVQQSTGVKAALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGV
Sbjct: 61  NKIEPDPDEEEEVQQSTGVKAALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGV 120

Query: 121 AKGTILTAWRLCRCNPLGGSGFDPPRWFGEERASEE 157
           AKGTILTAWRLCRCNPLGGSGFDPPRWFGEERASEE
Sbjct: 121 AKGTILTAWRLCRCNPLGGSGFDPPRWFGEERASEE 156
[Close]
BLAST of Spo09428.1 vs. NCBI nr
Match: gi|731341454|ref|XP_010681910.1| (PREDICTED: UPF0161 protein At3g09310 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 196.4 bits (498), Expect = 3.600e-47
Identity = 103/161 (63.98%), Postives = 119/161 (73.91%), Query Frame = 1 

		  

Query: 1   MAAIQSLTFFRFHSSSDIYPLSLSSSPSLKFPKHIKIYNSQLH--NFPT---SSKKFQRR 60
           MA + S    R    S  Y  +L+SSP +KFPK+IK+++ +L   NF +   S+   + R
Sbjct: 1   MAVVHSPACSRSPFFSGSYSSTLNSSPLVKFPKNIKVHHHRLRLPNFFSPSYSAHNIKPR 60

Query: 61  FSPILNKIEPDPDEEEEVQQSTGVKAALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAY 120
            SPI N  EPD   +EE  Q+ GVKAA+SML FYKREISPLMPKSCRYVPSCSEYSMIAY
Sbjct: 61  LSPICNTTEPD---QEEYVQTVGVKAAISMLKFYKREISPLMPKSCRYVPSCSEYSMIAY 120

Query: 121 KKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFGEERASEE 157
           KKYGV KGT+LTAWRLCRCNPLGGSGFDPPRWF EER  EE
Sbjct: 121 KKYGVFKGTVLTAWRLCRCNPLGGSGFDPPRWFDEERVPEE 158
[Close]
BLAST of Spo09428.1 vs. NCBI nr
Match: gi|674887948|emb|CDY44694.1| (BnaA05g29120D [Brassica napus])

HSP 1 Score: 166.4 bits (420), Expect = 4.000e-38
Identity = 86/143 (60.14%), Postives = 103/143 (72.03%), Query Frame = 1 

		  

Query: 13  HSSSDIYPLSLSSSPSLKFPK-HIKIYNSQL--HNFPTSSKKFQRRFSPILNKIEPDPD- 72
           H  S  + +S +S P    PK H+K    +L  H+FP ++K   R  S       PDPD 
Sbjct: 8   HRLSATHLISENSKP----PKLHLKFNTPRLSFHHFPQTNKHQLRCLSAKSTPSSPDPDS 67

Query: 73  -EEEEVQQSTGVKAALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGVAKGTILT 132
            ++ E Q+S GVKAAL+ML FYKREISP++P+SCRYVP+CSEYSM AYKKYGV KGT+LT
Sbjct: 68  PQDGEEQESVGVKAALAMLRFYKREISPVLPRSCRYVPTCSEYSMEAYKKYGVLKGTVLT 127

Query: 133 AWRLCRCNPLGGSGFDPPRWFGE 151
            WRLCRCNPLGGSGFDPPRWFGE
Sbjct: 128 TWRLCRCNPLGGSGFDPPRWFGE 146
[Close]
BLAST of Spo09428.1 vs. NCBI nr
Match: gi|823213642|ref|XP_012439564.1| (PREDICTED: UPF0161 protein At3g09310 [Gossypium raimondii])

HSP 1 Score: 162.2 bits (409), Expect = 7.500e-37
Identity = 82/135 (60.74%), Postives = 98/135 (72.59%), Query Frame = 1 

		  

Query: 27  PSLKFPKH-----IKIYNSQLHNFPTSSKKFQRRFSPILNKIEPDPDEEEEVQQSTGVKA 86
           P L  PK+     +K   +Q   F   S++       +LN     P+E++EV  + GVKA
Sbjct: 15  PLLTKPKNPNFNSLKFNPNQASRFCFPSRRCVLVNGTLLNSHRNTPEEDDEVD-NLGVKA 74

Query: 87  ALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGVAKGTILTAWRLCRCNPLGGSG 146
           ALSML FYKREISP++PKSCR+VPSCSEYSM AYKKYGV KGT+LTAWRLCRCNPLGGSG
Sbjct: 75  ALSMLKFYKREISPVIPKSCRFVPSCSEYSMEAYKKYGVVKGTVLTAWRLCRCNPLGGSG 134

Query: 147 FDPPRWFGEERASEE 157
           FDPPRWF EE+ +EE
Sbjct: 135 FDPPRWFDEEKPTEE 148
[Close]
BLAST of Spo09428.1 vs. NCBI nr
Match: gi|971535827|ref|XP_015164936.1| (PREDICTED: UPF0161 protein At3g09310 [Solanum tuberosum])

HSP 1 Score: 162.2 bits (409), Expect = 7.500e-37
Identity = 79/145 (54.48%), Postives = 97/145 (66.90%), Query Frame = 1 

		  

Query: 12  FHSSSDIYPLSLSSSPSLKFPKHIKIYNSQLHNFPTSSKKFQRRFSPILNKIEPDPDEEE 71
           F+S S   P S ++S  L    H K  ++ L       ++  R    +      + + ++
Sbjct: 13  FYSYSPCKPSSSTNSSFLSSSSHTKQQSNLLFPLRKKLRQQSRSLCIVSGSGSDESNSQD 72

Query: 72  EVQQSTGVKAALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGVAKGTILTAWRL 131
           +     GVKAALSML FYKREISP+MPKSCRY+P+CSEYSMIAYKKYGV KGT+LTAWRL
Sbjct: 73  DEVDDLGVKAALSMLKFYKREISPIMPKSCRYIPTCSEYSMIAYKKYGVVKGTVLTAWRL 132

Query: 132 CRCNPLGGSGFDPPRWFGEERASEE 157
           CRCNPLGGSGFDPPRWF EE   +E
Sbjct: 133 CRCNPLGGSGFDPPRWFDEESPPQE 157
[Close]
BLAST of Spo09428.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLN5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_052590 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 5.200e-85
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 1 

		  

Query: 1   MAAIQSLTFFRFHSSSDIYPLSLSSSPSLKFPKHIKIYNSQLHNFPTSSKKFQRRFSPIL 60
           MAAIQSLTFFRFHSSSDIYPLSLSSSPSLKFPKHIKIYNSQLHNFPTSSKKFQRRFSPIL
Sbjct: 1   MAAIQSLTFFRFHSSSDIYPLSLSSSPSLKFPKHIKIYNSQLHNFPTSSKKFQRRFSPIL 60

Query: 61  NKIEPDPDEEEEVQQSTGVKAALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGV 120
           NKIEPDPDEEEEVQQSTGVKAALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGV
Sbjct: 61  NKIEPDPDEEEEVQQSTGVKAALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGV 120

Query: 121 AKGTILTAWRLCRCNPLGGSGFDPPRWFGEERASEE 157
           AKGTILTAWRLCRCNPLGGSGFDPPRWFGEERASEE
Sbjct: 121 AKGTILTAWRLCRCNPLGGSGFDPPRWFGEERASEE 156
[Close]
BLAST of Spo09428.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EXV8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g144290 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.500e-47
Identity = 103/161 (63.98%), Postives = 119/161 (73.91%), Query Frame = 1 

		  

Query: 1   MAAIQSLTFFRFHSSSDIYPLSLSSSPSLKFPKHIKIYNSQLH--NFPT---SSKKFQRR 60
           MA + S    R    S  Y  +L+SSP +KFPK+IK+++ +L   NF +   S+   + R
Sbjct: 1   MAVVHSPACSRSPFFSGSYSSTLNSSPLVKFPKNIKVHHHRLRLPNFFSPSYSAHNIKPR 60

Query: 61  FSPILNKIEPDPDEEEEVQQSTGVKAALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAY 120
            SPI N  EPD   +EE  Q+ GVKAA+SML FYKREISPLMPKSCRYVPSCSEYSMIAY
Sbjct: 61  LSPICNTTEPD---QEEYVQTVGVKAAISMLKFYKREISPLMPKSCRYVPSCSEYSMIAY 120

Query: 121 KKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFGEERASEE 157
           KKYGV KGT+LTAWRLCRCNPLGGSGFDPPRWF EER  EE
Sbjct: 121 KKYGVFKGTVLTAWRLCRCNPLGGSGFDPPRWFDEERVPEE 158
[Close]
BLAST of Spo09428.1 vs. UniProtKB/TrEMBL
Match: A0A078I5D4_BRANA (BnaA05g29120D protein OS=Brassica napus GN=BnaA05g29120D PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.800e-38
Identity = 86/143 (60.14%), Postives = 103/143 (72.03%), Query Frame = 1 

		  

Query: 13  HSSSDIYPLSLSSSPSLKFPK-HIKIYNSQL--HNFPTSSKKFQRRFSPILNKIEPDPD- 72
           H  S  + +S +S P    PK H+K    +L  H+FP ++K   R  S       PDPD 
Sbjct: 8   HRLSATHLISENSKP----PKLHLKFNTPRLSFHHFPQTNKHQLRCLSAKSTPSSPDPDS 67

Query: 73  -EEEEVQQSTGVKAALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGVAKGTILT 132
            ++ E Q+S GVKAAL+ML FYKREISP++P+SCRYVP+CSEYSM AYKKYGV KGT+LT
Sbjct: 68  PQDGEEQESVGVKAALAMLRFYKREISPVLPRSCRYVPTCSEYSMEAYKKYGVLKGTVLT 127

Query: 133 AWRLCRCNPLGGSGFDPPRWFGE 151
            WRLCRCNPLGGSGFDPPRWFGE
Sbjct: 128 TWRLCRCNPLGGSGFDPPRWFGE 146
[Close]
BLAST of Spo09428.1 vs. UniProtKB/TrEMBL
Match: A0A0D2RLB5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G240100 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.300e-37
Identity = 82/135 (60.74%), Postives = 98/135 (72.59%), Query Frame = 1 

		  

Query: 27  PSLKFPKH-----IKIYNSQLHNFPTSSKKFQRRFSPILNKIEPDPDEEEEVQQSTGVKA 86
           P L  PK+     +K   +Q   F   S++       +LN     P+E++EV  + GVKA
Sbjct: 15  PLLTKPKNPNFNSLKFNPNQASRFCFPSRRCVLVNGTLLNSHRNTPEEDDEVD-NLGVKA 74

Query: 87  ALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGVAKGTILTAWRLCRCNPLGGSG 146
           ALSML FYKREISP++PKSCR+VPSCSEYSM AYKKYGV KGT+LTAWRLCRCNPLGGSG
Sbjct: 75  ALSMLKFYKREISPVIPKSCRFVPSCSEYSMEAYKKYGVVKGTVLTAWRLCRCNPLGGSG 134

Query: 147 FDPPRWFGEERASEE 157
           FDPPRWF EE+ +EE
Sbjct: 135 FDPPRWFDEEKPTEE 148
[Close]
BLAST of Spo09428.1 vs. UniProtKB/TrEMBL
Match: A0A059DET9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01276 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 9.000e-37
Identity = 75/105 (71.43%), Postives = 84/105 (80.00%), Query Frame = 1 

		  

Query: 55  RFSPILNKIEPDPDEE---EEVQQSTGVKAALSMLNFYKREISPLMPKSCRYVPSCSEYS 114
           +F  I +++  + D     E    S GVKAALSML FYKREISP++P SCRYVP+CSEYS
Sbjct: 41  KFQSITSELRSNSDSSNPPENKADSPGVKAALSMLRFYKREISPILPNSCRYVPTCSEYS 100

Query: 115 MIAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFGEERASEE 157
           M AYKKYGV KGT+LTAWRLCRCNPLGGSGFDPPRWFGEER SEE
Sbjct: 101 MEAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDPPRWFGEERPSEE 145
[Close]
BLAST of Spo09428.1 vs. ExPASy Swiss-Prot
Match: U161_ARATH (UPF0161 protein At3g09310 OS=Arabidopsis thaliana GN=At3g09310 PE=2 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 1.300e-36
Identity = 72/109 (66.06%), Postives = 85/109 (77.98%), Query Frame = 1 

		  

Query: 44  NFPTSSKKFQRRFSPILNKIEPDP--DEEEEVQQSTGVKAALSMLNFYKREISPLMPKSC 103
           + P ++K   R  S      +PDP   ++ E  +S GVKAAL+ML FYKREISP++P+SC
Sbjct: 38  HLPRNTKNQLRCLSAKSTPSKPDPASPQDGEELESVGVKAALAMLRFYKREISPVLPRSC 97

Query: 104 RYVPSCSEYSMIAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFGE 151
           RYVP+CSEYSM AYKKYGV KGT+LT WRLCRCNPLGGSGFDPPRWFGE
Sbjct: 98  RYVPTCSEYSMEAYKKYGVLKGTVLTTWRLCRCNPLGGSGFDPPRWFGE 146
[Close]
BLAST of Spo09428.1 vs. ExPASy Swiss-Prot
Match: YIDD_SALRD (Putative membrane protein insertion efficiency factor OS=Salinibacter ruber (strain DSM 13855 / M31) GN=SRU_1017 PE=3 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.300e-15
Identity = 32/74 (43.24%), Postives = 52/74 (70.27%), Query Frame = 1 

		  

Query: 83  LSMLNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGVAKGTILTAWRLCRCNPLGGSGF 142
           + ++  Y+  +SP + ++CR+ P+CS Y++ A+++YG  KG +LT  RL RC+P GG G+
Sbjct: 17  IGLVRLYQLVLSPHLGRTCRFHPTCSAYAIQAFREYGALKGLVLTVHRLLRCHPWGGHGY 76

Query: 143 DPPRWFGEERASEE 157
           DPPRWF EE  + +
Sbjct: 77  DPPRWFDEEHPAAD 90
[Close]
BLAST of Spo09428.1 vs. ExPASy Swiss-Prot
Match: YIDD_PORG3 (Putative membrane protein insertion efficiency factor OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / CIP 103683 / JCM 12257 / NCTC 11834 / 2561) GN=PGN_0308 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.400e-14
Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 1 

		  

Query: 79  VKAALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGVAKGTILTAWRLCRCNPLG 138
           V+  L  + FYKR ISPL P SCR+ PSCS Y++ A +KYG  KG +L+  R+ RC+P G
Sbjct: 9   VQLLLLPIFFYKRFISPLTPPSCRFTPSCSSYAIEALRKYGPGKGLLLSIKRILRCHPWG 68

Query: 139 GSGFDP 145
           GSG+DP
Sbjct: 69  GSGYDP 74
[Close]
BLAST of Spo09428.1 vs. ExPASy Swiss-Prot
Match: YIDD_PORGI (Putative membrane protein insertion efficiency factor OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=PG_0200 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.400e-14
Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 1 

		  

Query: 79  VKAALSMLNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGVAKGTILTAWRLCRCNPLG 138
           V+  L  + FYKR ISPL P SCR+ PSCS Y++ A +KYG  KG +L+  R+ RC+P G
Sbjct: 9   VQLLLLPIFFYKRFISPLTPPSCRFTPSCSSYAIEALRKYGPGKGLLLSIKRILRCHPWG 68

Query: 139 GSGFDP 145
           GSG+DP
Sbjct: 69  GSGYDP 74
[Close]
BLAST of Spo09428.1 vs. ExPASy Swiss-Prot
Match: YIDD_CAUSK (Putative membrane protein insertion efficiency factor OS=Caulobacter sp. (strain K31) GN=Caul_4526 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.400e-14
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 1 

		  

Query: 86  LNFYKREISPLMPKSCRYVPSCSEYSMIAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPP 145
           L  YK  +SP + + CRY+P+CSEY+  A K +G  KG+ L   R+CRCNPLGGSG+DPP
Sbjct: 12  LKAYKTTLSPFIGRQCRYLPTCSEYAAQALKDHGPLKGSWLAVGRICRCNPLGGSGYDPP 71
[Close]
BLAST of Spo09428.1 vs. TAIR (Arabidopsis)
Match: AT3G09310.1 (unknown protein)

HSP 1 Score: 154.1 bits (388), Expect = 7.200e-38
Identity = 72/109 (66.06%), Postives = 85/109 (77.98%), Query Frame = 1 

		  

Query: 44  NFPTSSKKFQRRFSPILNKIEPDP--DEEEEVQQSTGVKAALSMLNFYKREISPLMPKSC 103
           + P ++K   R  S      +PDP   ++ E  +S GVKAAL+ML FYKREISP++P+SC
Sbjct: 38  HLPRNTKNQLRCLSAKSTPSKPDPASPQDGEELESVGVKAALAMLRFYKREISPVLPRSC 97

Query: 104 RYVPSCSEYSMIAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFGE 151
           RYVP+CSEYSM AYKKYGV KGT+LT WRLCRCNPLGGSGFDPPRWFGE
Sbjct: 98  RYVPTCSEYSMEAYKKYGVLKGTVLTTWRLCRCNPLGGSGFDPPRWFGE 146
The following BLAST results are available for this feature:
BLAST of Spo09428.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902226590|gb|KNA20420.1|7.4e-85100.hypothetical protein SOVF_0525... [more]
gi|731341454|ref|XP_010681910.1|3.6e-4763.9PREDICTED: UPF0161 protein At3... [more]
gi|674887948|emb|CDY44694.1|4.0e-3860.1BnaA05g29120D [Brassica napus][more]
gi|823213642|ref|XP_012439564.1|7.5e-3760.7PREDICTED: UPF0161 protein At3... [more]
gi|971535827|ref|XP_015164936.1|7.5e-3754.4PREDICTED: UPF0161 protein At3... [more]
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BLAST of Spo09428.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RLN5_SPIOL5.2e-85100.Uncharacterized protein OS=Spi... [more]
A0A0J8EXV8_BETVU2.5e-4763.9Uncharacterized protein OS=Bet... [more]
A0A078I5D4_BRANA2.8e-3860.1BnaA05g29120D protein OS=Brass... [more]
A0A0D2RLB5_GOSRA5.3e-3760.7Uncharacterized protein OS=Gos... [more]
A0A059DET9_EUCGR9.0e-3771.4Uncharacterized protein OS=Euc... [more]
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BLAST of Spo09428.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
U161_ARATH1.3e-3666.0UPF0161 protein At3g09310 OS=A... [more]
YIDD_SALRD1.3e-1543.2Putative membrane protein inse... [more]
YIDD_PORG31.4e-1454.5Putative membrane protein inse... [more]
YIDD_PORGI1.4e-1454.5Putative membrane protein inse... [more]
YIDD_CAUSK2.4e-1455.0Putative membrane protein inse... [more]
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BLAST of Spo09428.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G09310.17.2e-3866.0unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002696Putative membrane protein insertion efficiency factorPRODOMPD004225coord: 93..146
score: 1.0
IPR002696Putative membrane protein insertion efficiency factorHAMAPMF_00386UPF0161_YidDcoord: 78..146
score: 19
IPR002696Putative membrane protein insertion efficiency factorPFAMPF01809Haemolyticcoord: 81..144
score: 3.6
IPR002696Putative membrane protein insertion efficiency factorSMARTSM01234Haemolytic_2coord: 78..145
score: 2.5
IPR002696Putative membrane protein insertion efficiency factorTIGRFAMsTIGR00278TIGR00278coord: 85..145
score: 4.0
NoneNo IPR availablePANTHERPTHR33383FAMILY NOT NAMEDcoord: 59..156
score: 5.0