Spo09351.1 (mRNA)

Overview
NameSpo09351.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
Descriptionfibrillarin 2
LocationSpoScf_03485 : 7411 .. 16537 (+)
Sequence length909
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAGTGTACTGTTGCTGGATCGGAAACTGGATGTGAGGTTATATGGTTAAGCAACTTTCCTACAGTTGCCTCTGATGCTGGAGAAATGCAGATAAACAGGTACTTAATGTCTGGTAAAAAGATGGCTTATGGAGTTGAAAAATATCACATTAAGAATTGTTGCAGGCTCATTTCCTTTTCTAGAGGAGTATTGATGGTTCTGTTAACCGAATTAGTTGTAGATTGTGCAGTCCAGTAAATCAGATAATAGATGGGTCCAATTCTTGTGAACTGTGAGGTAAATATTAACCTACTTTGTATATAATTTTACAAGACATATAGTCCATGAAAATGCGCAAGGGTACATGTCCTGATCATGTAGGTATGTTTGATCTTGGCTCAATCGGATGTTTTAATCATCTTAGTATGTATTGTTGCATTGATTTCTTGATAGTTATAACGAATTCTATTTTGATTATTTGGGTATCATCTTAGTATTTATAGTTTCATTGGTTAGGTTATTGCATAATCATGGAATGTTAAAAGAATATGGTAAAGCTATAATATGTTAAAAGAATAGGGTAAAGCAACATAATTTAGCAGTCCGTTAATTAATAAACGTTGATTACTCTTCACAACCGTCAACTATAACAGGTGTAGTTTCATGAGCTTATGTGCGTCATGAGCTTGAGTACGTGCTACAAACCGGATCTTGTAAGTAATAGGTGTAGTTTCATGAGATATGCTATAATAGGTGTAGCTTCAACTATAATAGATGTAGTTTCATGAGATATGCTACCCTGTTTCCATTATTAGATTGCTCGCATTTTTGTTGGGCTGTTGCAAAGCTTATAGCTGACTAGGAGTTGGTTGATTTCATTGACTGTTTATGACACTCTTGGGCATATAATTTATATGAGAATAGATTTAGCCATTTAGGTGAAAGGCTGTTCAGAACTGCAAGAATGCCTCAAATAATGTATTAGTTTTTGTGATTTTTTATTGTGTGGGTCAGTCATCAGTGTTGTAGGTGAAATAGAAAGTCTGGATAAAATAGTATGCTTGGTTATTTGGTTCGATGGTTTTTCTACAAGTTTTCGTGTATGAACTTAGTGCCAATGCATACATTATCCGCTGAGTGACCTTCTTAGATGTGATTATACTGTGATATTGAATTACAGATTGGTTCTGGATTTTTAAATAGTATTTTTGCATTATACAAGAAGAAGATAGAACATGGATTGAGTTCAGGGTATGGCATCCCTTCTGATCTAAGTTGGCAGCTGACATTCTTGGTGGTGTTGATAACATTTGGATTGTAAGTATTTAATGCAAGAGTACTGTTCACACTTTTTTTTTATGTGGGTGTTTGTTATTCCTGACTGGTGTGATCTCATTTTCTGTTTAATTGCAGCAACCTGGAGCCAAGGTCTTGTATCTTGGTGCTGCTTCTGGAACAATTGTCTCTCTTGTCTCTGATCTTGTTGGCCCTGTAAGTTGCATGGGTATTATGGAGTAACTGAGAAATATGAATTCTTATCGTGGAGTTGATTTGATCGATATTCTCTTTGCAGGAGGGATGCATTTATGCAGTTGAATTTTCACACAGGAGTGGTAGAGATTTAGTTAACATGGCAAAGAAAAGAACAAATGTCATCCCGATCACTGAAGATGCTAGGCATCCTGCAAAGCACAGAATGTTGGTTGGCATGGTTGATGTTATCTTTTTCGATGTTGCCCAGCCTGATCAGGTATTGTTTCTTTTGTCGAATTTAGCTGGCTTTACATCATGATTTTTAGTTGGATTTTCTTTTGACATCTGTTTTCTTCCTTATTTTAGGGAGTATACATTGTTTTTATCATATGGGTTAGTGTAAAGTTGGGGTGGCTATCTGATACACCAAGCTTGTTTTCAACTTATTTATTATTTATCCGGTCTAATATTTGATATACAATTATATACATGGAAAATGGAAAGGAAATTGCCTTATTTAGCTTATTTAGTTTATTGATAACTTGTCATATCACATGAAACCATTTTCTGCCTTCTTTCATCTGAAGGTTGATGGAAACGTGAAGTAAGACTTGTGGCTTTAAGCATAAAACACTCTAGAGCAACTATTTTCTCCATTCAATATGCTACTTCGTATTTCTCATGCTTGCAATGCTGCTGTAAAGAGTTATAAAGCTTATTTTTTATATTATTGTTTTACATCATGGATTCGTAAAAACTAATTTGGCAGCCTTATACATACATCAACAACAAGAAAAGATAGGCCTGCTTGCAGTAAATTTATTGACGTCCTGATCCGGTTCTCATAAATTCAACAAACCCGTTGATATATAGTTCCTCTTGCAGCTTATGATCGCCAAAGATTTATGCAGCCTGCCTAGCTCAAGCCTTAATCTTCTGTGCTTCATCTCCCGCCATGGCTTGTCTCAGTGCGGAAACGTTGAGCTGTGGCACCCACCTAAGGCACACGATCCCCTTTCCTGATGTCCTATTCACAAAGCCTGGCGGTAAAGCCCATATGAAAGGCAACTGCGCAAGCTCTAGGCCATAAGAAATCTCATAAACTTCATCTTTAGTGAGTTTATACTCACTGCCAAACCCTATATAGATAACTGATCTAGGGCTCTGTTGATCAAGCCATTTGAAGTCTTCAATCCATGTTTCATCTGTGTTTTCTTCTTTCTTTACTTTGGGTGGTGAGAGCAGGCCAACTGGCACCACAGGCTTGTTAATGAGCATCTGATAAAGCTCGATATATTCACCTTCGAACTCTTTGCATCTTCGTACTCCTACTGCATCACCAAACTTGTTTTTAACTTGTTATTTATGTAGTGTTTCTGATTTTTTACTTGACTTGAGAGTTGAGACTTTTTTAATTGTGTTGGACATATTTTTAATTGTATCATATTTACGGAGTAGTATACTTGGTGTTTCTTTTCTTCGTTTTTATTGTGTTTTGATTAGGAGACCAAAATGCATCGCTTTTAGCCTTTTACCGATGGGCATCGCGCGCGGTCCGATCCTAGTTATACTAAAAGAGAGGAAATCAATGTGGTGATGACAAATGTCACTCATTGATTGGCCTCTCTTATAGGTATTACAAAAAATTATAAAATAAAATAAAATAATTGATTCTATAATTAATTGTTAACTTTTACCTCAAACAAATATTTGATTTTCTTTTCCTCAAAATNGCCTTTTACCGATGGGCATCGCGCGCGGTCCGATCCTAGTTATACTAAAAGAGAGGAAATCAATGTGGTGATGACAAATGCCACTCATTGATTGGCCTCTCTTATAGGTATTACAAAAAATTATAAAATAAAATAAAATAATTGATTCTATAATTAATTGTTAACTTTTACCTCAAACAAATATTTGATTTTCTTTTCCTCAAAATNTGATTCTATAATTAATTGTTAACTTTTACCTCAAACAAATATTTGATTTTCTTTTCCTCAAAATTTTAAAAAAAAATCATTCTATAAATAAGGAATATTTTTTAAAATTATATATCTTTTCTATATTTGGTAACAAATATAACCAATATAAGTTTATATTTTTATATAAAAAAAAAATTAATCCATTATACGGAGTACGTAGTAAGATTTTTAGAAAAATTTAAGAGTAGTCTACTTATTTGTATTTCGTATTTACATAATTCAAATACAAATAAATTAGAAAATCAATCAAGTATTAATAAGAGTGNTAATTCAAATACAAATAAATTAGAAAATCAATCAAGTATTAATAAGAGTGTATAAAAAATTACAATAGTACTCTATAATATTTTAACAACTAAATGCGATAATTATAACCGTCATTGATTGTACTATTTTATACGTAATATATTTAGCCACTAAATTTGATATTTATCACCGTCATCGATAGTAATATTTGACTACTTTAAAAAATATTATATAACTTCGTTAAACATGAGAAAAACTTGTGTACTATCTATCTACTACTTTACTACGTAATTCCTAAATTTTTTAGATGCGGCTATTTAATTTTAACACTAGCTGTTATATTCACACATACCTATACCTTTTCTGTTTTTTGGTGATTATTACTACTTTATGATAAACATAGTCATGTCTCCGTAGCATTTTGTTGAATTTGTCTAAATACTTACATGATACTACTTTTTAATAATTTTTACTAATCGATAATTTAATTAAGATATTAATAGTTGAAGTTATTTACTAATAACCGTGAAAATAAAACTGATTTATCCAAAAAAATGGAAGAAGGTGTAAACAAGAAAAATGATGAGCGACTACGTAGTCCTCTCAACTTAAAAAAGCTCCTCTAAATATTTTAGGCTAATCAATTGACTTACTCCATATATTTTAGCCGATTTTTAACAAACGTATGTATACGGAGTACTATACTAAAAGTGAGGCAAATTGATATGGAGATGACAAATACAACTCTTTTTGCCTCTTTTATAATATTGGTAAATAACCTATGATAAAATAATTAATATACTTTGTATATATTTTACCTAAAATCTCTAATTACTTATGGTAATAATCGATTATACTACGAATTACTTATTTACTCATGTTAATAAATTTCTTAATTTTAAATCTATATACTCTGTACTATACTAAAAGAGAGGCAAATGGATGTAGAGATGACAAATGTCTCTCTTTGATTTGCCTTTCTTATAACATAAATGATGACTAATTTGTAAGTACTATCAAGTTTCGTTTAGAAACTGTGTCATATATTGAGTACGAATATGTTCAAACGTTCCTTTGATCGGTTATTATTTGTAATCTAATGAAAAATCTTCGCATACAATTCTTGATAACCGATATGGAAAATCTTATAATAGTTTAACTTGGACTATCAATTATATTATTGTAATACTATCAACTTTTTAAAAATTTGTGTCATATAATGAATACGAATTTCACAACAAAAGTTAACTATTGATTTAATGTATTTAGCAAGGTCGTCTCAAACATTTTATAGGCCCTTTGTTAACTAACAAAATGAGCCCCTAGCCATATACTTTGTTTCGTACGAAACATATACTTAATCTTAAATATCAAAAATAACTTTGCCACATTCTCATTATCGTAATATTTTTATATGGAGCACGGATAATAATTTATTCGTTCATATTATTGAAATGTTAAGAGCATGTTGATTGAAATTTTGATTAATATATCGTAATCAACTATATCCAAAGTCATAAGATCTAGATAATTAAGTTTCCTTATTATTACTCCCTCCGTCCCTTAATACTCGACTTATTTTGACCGGACACATTTGCCAATGCATAACTTTGACCACCAATTTCTTTAACTGCATGTTATAAAATTTATAAGAATATTAATATTTTGAAAATATATATTAATATGAAGCCAACAATATATTATATACTAACATTTGTTTTCATATACTAGAAATAAAACGAGGTCAAAGTGAATTATGTGAATATTGCAAAAAGTCAAAACAGGTCGAGTATTAAGGGACGGAGGTAGTAATATGTTTGCAATAACAAAATACTTTTTATATATTAATGTGAATGATTTCAATATCACTTTAATATTTCGTGCAAAATAAAATTTATATATGTAAATGGTGAATCACATTTGATGATGGGGTGACTTTGGATTTTAGATTGATCTGAGGACAAAGTTAAACGTAGATGATTGACTAATGTTGACTAACAAAAAGAGATTTTGGTGGATGGGTATAAGGATAACATGTACCCACCTTGGTGATGGGGCGAGTTTGAATTGATCGGATTTGAGAATACTCACACAATCCTAATTATGTATGTCACTTTTAAATATTTTTTTCAATATTATAGCTAATACAATCAATTTTGATAGTTTGTAATAAACTTATGTCACTATATTTAAAATTTAGTTGAAAGAATAATTGGATTTTTATGGAACATAGTGATGTCAGAGTGTCAGTTGGCGAGGTTTTGGGAGATCCCCCGGTGCATCCGCCCCAAGTGGGTGGCGATGGAGGAAAGTTTATTGGGTGATGGGGTTAAAAAATATAATTGTCGCGGGTGAAGGGGTGATTTTGGATTTTAGATTGGACCCGCCTAAGTCGTTAATATTTCATCTGATTGATTATGAATATATAAAAAAAATGTACTATTAACGTATAATGTTTTGCTTATTTACTCAGTAACACTAATTAGACAAAGAATTTTCAGATGCTCTATAATAGATTTTAAAATTCAAAACTCTTTTACCAAAAAAAAAAAAAAACGAGTCTAGGGGTGGGTGTGGATACACGGGAAGGGAGGTAATGAAGAGGGGGTGAATTTTATTTTGTACCTCTCGAGACGGGGGATCGGGAGGAGTGGGTATCGTTCCAATCGTAGATGGAGGGGATGAAGATGAGAATTATAGGCGGGTGCGGGTGTGCAGGCTCTGTTCCATCTCAAAGTTATCTCTAACTCAATAAAGGAAATGGTCTAGATAGGTGTTAAGTGATCGGGTAATGAGGTTGACGGGATGACTGTGCGAGTATTAAGTGGGTATTACTATCGAAGTGAAGGGCGGGTGAGATAACATGATGTTAGACACAAATACTGGTGAATGAGAATGAAAATAATTTTATCTATGTACCCTTATTTGTTTTAATTGCTTAAGACACCGAATGAGCAATAACAAATTTATCCATCGTTAATTATTTTTTATTTGGAGAATATCTATAAACTCTATTTTAATGATAATTGTATACCAGATTTCATATAAATTTATATTTAGGTTATAAATCGTGCATCACACGAGTACTATATTAGTCATTTTCTAAATACTAAGTACACCGGGTGAGGTAGAAAGTTAAAACCAGAAACAAAGGCGAAAAGCCGAAGAATCGATCACATGATAAAAACTTCCGTAAGGACAAAATTGGGGCCATGTTATTAGTGAAAAATGGAAATCGAATCTCATAATTATGAATATCAATAGCATATCGTATTATCATGGATATTCATGGACCACTTCATGGCTTTAAGTCCCACAAATTTTAAGTGGCAAAAATCGATCCAATTATAAATTGATACCTTCCAAGATATATAGAAATAAATTAATATGAGCACGTAGATTTGAGATTGAGCCCTTAAAATACAACTCTTTAATTTCGTATGTCTCTGAAGGTGTCTTTTTTGGTTTTTGTTAGAGATAATATTTCATTTTAATTAGACTAAATGCAACTTAAAATACTATCACATCTCAATCTTTAGTTTCGTTATTTAGAGCTTTGGCACAATTTAATTACTAACTAGTTTTTTAGCCCTAGCGATGCCCCGGATTCCTACATTGATAGCATTCACAATTACTTATATATTTTATTTTGTGATAACAATAGTTTAGTGGTAAAAGATTTATTGTTTAAACACAAGGTGTAAGGTTCAAACCTTCACGTTTGACATTTTTTTTTTTTTATGTATGTGAAGATTACATGGAACGAAAGATCCATAAACAGAGCACCATATGTTATGTATATTTTTTTATAGACGCTTTTTAATATATAGTATAGAAGTCCATGCCCTTTGTAAGACCCCCTTCCAAGTTCCTCGCAAGTGCCCCAACCCAAAAGAAAAGAGGGTAAAGGCATTAAATTAGAGTGAGAAAGAATGATAAGAAATGGAGCCAATTTCAACTGTGAAGAAATAGAGGGGCAGCTGCTTACATGACTTGATGACTATACTCAAAAGAAATAAAGTGCCCCAACTCTTTCATTTTCCTATATCAAATTAAGCTTGTCTATCTCAACTAATTCAATTCCCATTTTTAGTTATTGTATGTAAACCCTTGACCTTACAAGGATCAAGTAATGTAGTAAGTTGCACTCCCTGGAGAAGAGGGACGATTGAACATTTTACCTCCAAGATGCTCTCCTATGTCAATATCAGTCGTTAATTTATCACTCACTAGGAGGTCTAGGAGTACGTTTTTACAAATCCTAATTATTATGTAGTATACCACACACTGTACTGAAACCCTTCAAAGTTGATGGATATATCCATGAGTTGATATGTATACTTGGGTCGGGTTGACGGGTATCAAGTGGGGCGGGTACAGATGGGGCGGGACAAGCCGGGATGGGGTGGGTCCAACACACAATCCACACCTGCCCAATCACTCATGACGAGTATAATTTTTATACCCATCCGGGCCATCCCCCCTTCACCCGCCAAACCTCCCCCATCCCAGCCTATTNAATATCAGTCGTTAATTTATCACTCACTAGGAGGTCTAGGAGTACGTTTTTACAAATCCTAATTATTATGTAGTATACCACACACTGTACTGAAACCCTTCAAAGTTGATGGATATATCCATGAGTTGATATGTATACTTGGGTCGGGTTGACGGGTATCAAGTGGGGCGGGTACAGATGGGGCGGGACAAGCCGGGATGGGGTGGGTCCAACACACAATCCACACCTGCCCAATCACTCATGACGAGTATAATTTTTATACCCATCCGGGCCATCCCCCCTTCACCCGCCAAACCTCCCCCATCCCAGCCTATTGAGGCGGATGCGGGACGAGTCTCCCATAAAACGCGCTCCACTGACATCCTTAGTCAACCCACTAATCATAGTATTCTTTAGGTATATTTCCGTCAAAAATAGATACTTGTATGACAAATGATATTAAACAAATCATAACTAAAATAAAAAGCAACCTCTACACAATGTCAACAATCTATCACCTTCTCTTGATTTCAATGGCTTCCTCGCCCCTCGTCATCCACCGGTGAATGTGGTTAACAATCCTGACGACGGTCCGGTGCCAATGGAATATTCCCCCGTCTCATTGCAGGAGCACTCTTCTGGTTCAATGGTTGATTCCACTTGTTCGTATGAATCGCCTGCGGTAGTGAGCAGAGGAAAATCACCCTTGAAGTTAGCTTTGTCAAGGAAGGGAGATCGAGTGTGGAAATGGGTCAAAAACATTTGCCCTGCAAAGCGTAAGTTGTCTTGTGAGAATGGGGTTGATCGTCAGATTGGGGTGAAGAACAAGGAGGGAGACTCATGTTTGTGTTGTCCGTTTTTGTTTCCTTTGAAGAAAAAGGCAGTGCTCCTCGGGTTCTGTTTCGGTGAGGAAAAGCCCTTATGTGGGACCTGGTTCAGGTGA

mRNA sequence

ATGTCTAAGTGTACTGTTGCTGGATCGGAAACTGGATGTGAGGTTATATGGTTAAGCAACTTTCCTACAGTTGCCTCTGATGCTGGAGAAATGCAGATAAACAGTATTTTTGCATTATACAAGAAGAAGATAGAACATGGATTGAGTTCAGGGTATGGCATCCCTTCTGATCTAAGTTGGCAGCTGACATTCTTGGTGCAACCTGGAGCCAAGGTCTTGTATCTTGGTGCTGCTTCTGGAACAATTGTCTCTCTTGTCTCTGATCTTGTTGGCCCTGAGGGATGCATTTATGCAGTTGAATTTTCACACAGGAGTGGTAGAGATTTAGTTAACATGGCAAAGAAAAGAACAAATGTCATCCCGATCACTGAAGATGCTAGGCATCCTGCAAAGCACAGAATGTTGGTTGGCATGGTTGATGTTATCTTTTTCGATGTTGCCCAGCCTGATCAGCAACCTCTACACAATGTCAACAATCTATCACCTTCTCTTGATTTCAATGGCTTCCTCGCCCCTCGTCATCCACCGGTGAATGTGGTTAACAATCCTGACGACGGTCCGGTGCCAATGGAATATTCCCCCGTCTCATTGCAGGAGCACTCTTCTGGTTCAATGGTTGATTCCACTTGTTCGTATGAATCGCCTGCGGTAGTGAGCAGAGGAAAATCACCCTTGAAGTTAGCTTTGTCAAGGAAGGGAGATCGAGTGTGGAAATGGGTCAAAAACATTTGCCCTGCAAAGCGTAAGTTGTCTTGTGAGAATGGGGTTGATCGTCAGATTGGGGTGAAGAACAAGGAGGGAGACTCATGTTTGTGTTGTCCGTTTTTGTTTCCTTTGAAGAAAAAGGCAGTGCTCCTCGGGTTCTGTTTCGGTGAGGAAAAGCCCTTATGTGGGACCTGGTTCAGGTGA

Coding sequence (CDS)

ATGTCTAAGTGTACTGTTGCTGGATCGGAAACTGGATGTGAGGTTATATGGTTAAGCAACTTTCCTACAGTTGCCTCTGATGCTGGAGAAATGCAGATAAACAGTATTTTTGCATTATACAAGAAGAAGATAGAACATGGATTGAGTTCAGGGTATGGCATCCCTTCTGATCTAAGTTGGCAGCTGACATTCTTGGTGCAACCTGGAGCCAAGGTCTTGTATCTTGGTGCTGCTTCTGGAACAATTGTCTCTCTTGTCTCTGATCTTGTTGGCCCTGAGGGATGCATTTATGCAGTTGAATTTTCACACAGGAGTGGTAGAGATTTAGTTAACATGGCAAAGAAAAGAACAAATGTCATCCCGATCACTGAAGATGCTAGGCATCCTGCAAAGCACAGAATGTTGGTTGGCATGGTTGATGTTATCTTTTTCGATGTTGCCCAGCCTGATCAGCAACCTCTACACAATGTCAACAATCTATCACCTTCTCTTGATTTCAATGGCTTCCTCGCCCCTCGTCATCCACCGGTGAATGTGGTTAACAATCCTGACGACGGTCCGGTGCCAATGGAATATTCCCCCGTCTCATTGCAGGAGCACTCTTCTGGTTCAATGGTTGATTCCACTTGTTCGTATGAATCGCCTGCGGTAGTGAGCAGAGGAAAATCACCCTTGAAGTTAGCTTTGTCAAGGAAGGGAGATCGAGTGTGGAAATGGGTCAAAAACATTTGCCCTGCAAAGCGTAAGTTGTCTTGTGAGAATGGGGTTGATCGTCAGATTGGGGTGAAGAACAAGGAGGGAGACTCATGTTTGTGTTGTCCGTTTTTGTTTCCTTTGAAGAAAAAGGCAGTGCTCCTCGGGTTCTGTTTCGGTGAGGAAAAGCCCTTATGTGGGACCTGGTTCAGGTGA

Protein sequence

MSKCTVAGSETGCEVIWLSNFPTVASDAGEMQINSIFALYKKKIEHGLSSGYGIPSDLSWQLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITEDARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNNLSPSLDFNGFLAPRHPPVNVVNNPDDGPVPMEYSPVSLQEHSSGSMVDSTCSYESPAVVSRGKSPLKLALSRKGDRVWKWVKNICPAKRKLSCENGVDRQIGVKNKEGDSCLCCPFLFPLKKKAVLLGFCFGEEKPLCGTWFR
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo09351Spo09351gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo09351.1Spo09351.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo09351.1.exon.1Spo09351.1.exon.1exon
Spo09351.1.exon.2Spo09351.1.exon.2exon
Spo09351.1.exon.3Spo09351.1.exon.3exon
Spo09351.1.exon.4Spo09351.1.exon.4exon
Spo09351.1.exon.5Spo09351.1.exon.5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo09351.1.CDS.1Spo09351.1.CDS.1CDS
Spo09351.1.CDS.2Spo09351.1.CDS.2CDS
Spo09351.1.CDS.3Spo09351.1.CDS.3CDS
Spo09351.1.CDS.4Spo09351.1.CDS.4CDS
Spo09351.1.CDS.5Spo09351.1.CDS.5CDS


Homology
BLAST of Spo09351.1 vs. NCBI nr
Match: gi|902183174|gb|KNA10070.1| (hypothetical protein SOVF_147810 isoform C [Spinacia oleracea])

HSP 1 Score: 235.0 bits (598), Expect = 1.800e-58
Identity = 126/159 (79.25%), Postives = 130/159 (81.76%), Query Frame = 1

		  

Query: 1   MSKCTVAGSETGCEVIWLSNFPTVASDAGEMQINSIFALYKKKIEHGLSSGYGIPSDLSW 60
           MSKCTVAGSETGCEVIWL+NFPTVASDAGEMQIN    L    I  G+        D  W
Sbjct: 116 MSKCTVAGSETGCEVIWLNNFPTVASDAGEMQINRY--LMSADILGGV--------DNIW 175

Query: 61  QLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 120
                +QPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI
Sbjct: 176 -----IQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 235

Query: 121 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNN 160
           PITEDARHPAKHRMLVGMVDVIFFDVAQPD QP   +NN
Sbjct: 236 PITEDARHPAKHRMLVGMVDVIFFDVAQPD-QPYTYINN 258

BLAST of Spo09351.1 vs. NCBI nr
Match: gi|902183173|gb|KNA10069.1| (hypothetical protein SOVF_147810 isoform B [Spinacia oleracea])

HSP 1 Score: 233.0 bits (593), Expect = 6.700e-58
Identity = 123/151 (81.46%), Postives = 126/151 (83.44%), Query Frame = 1

		  

Query: 1   MSKCTVAGSETGCEVIWLSNFPTVASDAGEMQINSIFALYKKKIEHGLSSGYGIPSDLSW 60
           MSKCTVAGSETGCEVIWL+NFPTVASDAGEMQIN    L    I  G+        D  W
Sbjct: 116 MSKCTVAGSETGCEVIWLNNFPTVASDAGEMQINRY--LMSADILGGV--------DNIW 175

Query: 61  QLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 120
                +QPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI
Sbjct: 176 -----IQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 235

Query: 121 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ 152
           PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ
Sbjct: 236 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ 251

BLAST of Spo09351.1 vs. NCBI nr
Match: gi|902236242|gb|KNA24281.1| (hypothetical protein SOVF_016890 [Spinacia oleracea])

HSP 1 Score: 163.3 bits (412), Expect = 6.600e-37
Identity = 80/93 (86.02%), Postives = 85/93 (91.40%), Query Frame = 1

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           +QPGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 151 IQPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 210

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 211 ARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 243

BLAST of Spo09351.1 vs. NCBI nr
Match: gi|6003681|gb|AAF00542.1| (fibrillarin homolog [Arabidopsis thaliana])

HSP 1 Score: 162.9 bits (411), Expect = 8.600e-37
Identity = 82/106 (77.36%), Postives = 89/106 (83.96%), Query Frame = 1

		  

Query: 53  GIPSDLSWQLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNM 112
           G+  D  W     ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNM
Sbjct: 135 GVDLDNIW-----IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNM 194

Query: 113 AKKRTNVIPITEDARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           AKKRTNVIPI EDARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 195 AKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 235

BLAST of Spo09351.1 vs. NCBI nr
Match: gi|297792583|ref|XP_002864176.1| (hypothetical protein ARALYDRAFT_495317 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 162.5 bits (410), Expect = 1.100e-36
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 1

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 140 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 199

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 200 ARHPAKYRMLVGMVDVIFSDVAQPDQARILGLN 232

BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QS47_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_147810 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.200e-58
Identity = 126/159 (79.25%), Postives = 130/159 (81.76%), Query Frame = 1

		  

Query: 1   MSKCTVAGSETGCEVIWLSNFPTVASDAGEMQINSIFALYKKKIEHGLSSGYGIPSDLSW 60
           MSKCTVAGSETGCEVIWL+NFPTVASDAGEMQIN    L    I  G+        D  W
Sbjct: 116 MSKCTVAGSETGCEVIWLNNFPTVASDAGEMQINRY--LMSADILGGV--------DNIW 175

Query: 61  QLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 120
                +QPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI
Sbjct: 176 -----IQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 235

Query: 121 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNN 160
           PITEDARHPAKHRMLVGMVDVIFFDVAQPD QP   +NN
Sbjct: 236 PITEDARHPAKHRMLVGMVDVIFFDVAQPD-QPYTYINN 258

BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QS27_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_147810 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 4.700e-58
Identity = 123/151 (81.46%), Postives = 126/151 (83.44%), Query Frame = 1

		  

Query: 1   MSKCTVAGSETGCEVIWLSNFPTVASDAGEMQINSIFALYKKKIEHGLSSGYGIPSDLSW 60
           MSKCTVAGSETGCEVIWL+NFPTVASDAGEMQIN    L    I  G+        D  W
Sbjct: 116 MSKCTVAGSETGCEVIWLNNFPTVASDAGEMQINRY--LMSADILGGV--------DNIW 175

Query: 61  QLTFLVQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 120
                +QPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI
Sbjct: 176 -----IQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVI 235

Query: 121 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ 152
           PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ
Sbjct: 236 PITEDARHPAKHRMLVGMVDVIFFDVAQPDQ 251

BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RXN3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_016890 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.600e-37
Identity = 80/93 (86.02%), Postives = 85/93 (91.40%), Query Frame = 1

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           +QPGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 151 IQPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 210

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 211 ARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 243

BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Match: D7MS52_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495317 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.800e-37
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 1

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 140 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 199

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 200 ARHPAKYRMLVGMVDVIFSDVAQPDQARILGLN 232

BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Match: V4P5H1_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10025746mg PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.300e-36
Identity = 88/127 (69.29%), Postives = 99/127 (77.95%), Query Frame = 1

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 152 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 211

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNNLSPSLDFNGFL-APRHPPVNVVNNPD 185
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +        +L+ N FL +  H  +++  N  
Sbjct: 212 ARHPAKYRMLVGMVDVIFSDVAQPDQARI-------LALNANFFLKSGGHFVISIKANCI 271

Query: 186 DGPVPME 192
           D  VP E
Sbjct: 272 DSTVPAE 271

BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Match: MD36B_ARATH (Probable mediator of RNA polymerase II transcription subunit 36b OS=Arabidopsis thaliana GN=MED36B PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.200e-38
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 1

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 141 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 200

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 201 ARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 233

BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Match: MD36A_ARATH (Mediator of RNA polymerase II transcription subunit 36a OS=Arabidopsis thaliana GN=MED36A PE=1 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 2.700e-38
Identity = 88/126 (69.84%), Postives = 97/126 (76.98%), Query Frame = 1

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 152 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 211

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNNLSPSLDFNGFLAPRHPPVNVVNNPDD 185
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  + N S  L   G     H  +++  N  D
Sbjct: 212 ARHPAKYRMLVGMVDVIFSDVAQPDQARILAL-NASYFLKSGG-----HFVISIKANCID 271

Query: 186 GPVPME 192
             VP E
Sbjct: 272 STVPAE 271

BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Match: FBRL_RAT (rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus GN=Fbl PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 1.000e-34
Identity = 69/93 (74.19%), Postives = 82/93 (88.17%), Query Frame = 1

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSD+VGP+G +YAVEFSHRSGRDL+N+AKKRTN+IP+ ED
Sbjct: 163 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIED 222

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHP K+RML+ MVDVIF DVAQPDQ  +  +N
Sbjct: 223 ARHPHKYRMLIAMVDVIFADVAQPDQTRIVALN 255

BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Match: FBRL_MOUSE (rRNA 2'-O-methyltransferase fibrillarin OS=Mus musculus GN=Fbl PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 1.000e-34
Identity = 69/93 (74.19%), Postives = 82/93 (88.17%), Query Frame = 1

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSD+VGP+G +YAVEFSHRSGRDL+N+AKKRTN+IP+ ED
Sbjct: 163 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIED 222

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHP K+RML+ MVDVIF DVAQPDQ  +  +N
Sbjct: 223 ARHPHKYRMLIAMVDVIFADVAQPDQTRIVALN 255

BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Match: FBRL_HUMAN (rRNA 2'-O-methyltransferase fibrillarin OS=Homo sapiens GN=FBL PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 1.000e-34
Identity = 69/93 (74.19%), Postives = 82/93 (88.17%), Query Frame = 1

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSD+VGP+G +YAVEFSHRSGRDL+N+AKKRTN+IP+ ED
Sbjct: 157 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIED 216

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHP K+RML+ MVDVIF DVAQPDQ  +  +N
Sbjct: 217 ARHPHKYRMLIAMVDVIFADVAQPDQTRIVALN 249

BLAST of Spo09351.1 vs. TAIR (Arabidopsis)
Match: AT5G52470.1 (fibrillarin 1)

HSP 1 Score: 161.8 bits (408), Expect = 6.700e-40
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 1

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 141 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 200

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  +N
Sbjct: 201 ARHPAKYRMLVGMVDVIFSDVAQPDQARILALN 233

BLAST of Spo09351.1 vs. TAIR (Arabidopsis)
Match: AT4G25630.1 (fibrillarin 2)

HSP 1 Score: 160.6 bits (405), Expect = 1.500e-39
Identity = 88/126 (69.84%), Postives = 97/126 (76.98%), Query Frame = 1

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PGAKVLYLGAASGT VS VSDLVGPEGC+YAVEFSHRSGRDLVNMAKKRTNVIPI ED
Sbjct: 152 IKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIED 211

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVNNLSPSLDFNGFLAPRHPPVNVVNNPDD 185
           ARHPAK+RMLVGMVDVIF DVAQPDQ  +  + N S  L   G     H  +++  N  D
Sbjct: 212 ARHPAKYRMLVGMVDVIFSDVAQPDQARILAL-NASYFLKSGG-----HFVISIKANCID 271

Query: 186 GPVPME 192
             VP E
Sbjct: 272 STVPAE 271

BLAST of Spo09351.1 vs. TAIR (Arabidopsis)
Match: AT5G52490.1 (Fibrillarin family protein)

HSP 1 Score: 132.1 bits (331), Expect = 5.700e-31
Identity = 63/93 (67.74%), Postives = 77/93 (82.80%), Query Frame = 1

		  

Query: 66  VQPGAKVLYLGAASGTIVSLVSDLVGPEGCIYAVEFSHRSGRDLVNMAKKRTNVIPITED 125
           ++PG KVLYLGA+SG  VS VSD+VGPEGC+YAVE S   G+ L+NMA+KRTNVIPI ED
Sbjct: 131 IKPGVKVLYLGASSGYTVSHVSDIVGPEGCVYAVEHSDICGKVLMNMAEKRTNVIPIIED 190

Query: 126 ARHPAKHRMLVGMVDVIFFDVAQPDQQPLHNVN 159
           ARHPAK+RMLVGMVD+IF DV  P+Q  + ++N
Sbjct: 191 ARHPAKYRMLVGMVDIIFSDVNHPEQANILSLN 223

The following BLAST results are available for this feature:
BLAST of Spo09351.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902183174|gb|KNA10070.1|1.8e-5879.2hypothetical protein SOVF_1478... [more]
gi|902183173|gb|KNA10069.1|6.7e-5881.4hypothetical protein SOVF_1478... [more]
gi|902236242|gb|KNA24281.1|6.6e-3786.0hypothetical protein SOVF_0168... [more]
gi|6003681|gb|AAF00542.1|8.6e-3777.3fibrillarin homolog [Arabidops... [more]
gi|297792583|ref|XP_002864176.1|1.1e-3684.9hypothetical protein ARALYDRAF... [more]
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BLAST of Spo09351.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QS47_SPIOL1.2e-5879.2Uncharacterized protein OS=Spi... [more]
A0A0K9QS27_SPIOL4.7e-5881.4Uncharacterized protein OS=Spi... [more]
A0A0K9RXN3_SPIOL4.6e-3786.0Uncharacterized protein OS=Spi... [more]
D7MS52_ARALL7.8e-3784.9Putative uncharacterized prote... [more]
V4P5H1_EUTSA1.3e-3669.2Uncharacterized protein OS=Eut... [more]
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BLAST of Spo09351.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
MD36B_ARATH1.2e-3884.9Probable mediator of RNA polym... [more]
MD36A_ARATH2.7e-3869.8Mediator of RNA polymerase II ... [more]
FBRL_RAT1.0e-3474.1rRNA 2'-O-methyltransferase fi... [more]
FBRL_MOUSE1.0e-3474.1rRNA 2'-O-methyltransferase fi... [more]
FBRL_HUMAN1.0e-3474.1rRNA 2'-O-methyltransferase fi... [more]
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BLAST of Spo09351.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G52470.16.7e-4084.9fibrillarin 1[more]
AT4G25630.11.5e-3969.8fibrillarin 2[more]
AT5G52490.15.7e-3167.7Fibrillarin family protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000692FibrillarinPRINTSPR00052FIBRILLARINcoord: 69..90
score: 1.1E-33coord: 119..148
score: 1.1E-33coord: 94..111
score: 1.1
IPR000692FibrillarinPFAMPF01269Fibrillarincoord: 64..158
score: 1.8
IPR000692FibrillarinSMARTSM01206Fibrillarin_2coord: 44..175
score: 2.1
NoneNo IPR availablePANTHERPTHR10335RRNA 2-O-METHYLTRANSFERASE FIBRILLARINcoord: 67..151
score: 1.4

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006364 rRNA processing
biological_process GO:0000338 protein deneddylation
biological_process GO:0001510 RNA methylation
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0008033 tRNA processing
biological_process GO:0016579 protein deubiquitination
biological_process GO:0016567 protein ubiquitination
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009640 photomorphogenesis
biological_process GO:0016571 histone methylation
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
cellular_component GO:0005829 cytosol
cellular_component GO:0016592 mediator complex
cellular_component GO:0016020 membrane
cellular_component GO:0005730 nucleolus
cellular_component GO:1990904 ribonucleoprotein complex
molecular_function GO:0003723 RNA binding
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0030515 snoRNA binding