Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAACAAGCAATTGCATTTACAGAGAGAAAGAGAGAAAACAAATACTTTCACTCTTCCAAAAAAAAAAAAAAGAGTAACCAAAATCAAAAACACAAAAAAAGAGATGGATTTTGCTCATTTCTTCGCACACCTTCCATGGATTACTATCTTTGGTCTCCTAGGTATATTATATAGTTTATATATCAATATTCTTATACTATATAGTTTATTCATTATACATACCGTCTTTGCATGGTATAGTACGTATTTCATCCATCGATCTGTATACAACGTACCAACTTTGGTATCGCTACAATATAGTTTCATTCATCATATTATACTAGGTTAAGTTTTTATTAAGTTGTAGTGGGATGTTACATTATTATTATTATGAGTAGTAGTGCATCAAAAAGTGTTACATTTAGTACTAATAATAATAATTATTATTATTAAATAGCACTTTTTCAATCATTTGCTTACATGTAAACAACATAGATTACACCTGTAGATTGTTTAATAATAAAGTAATTAATAATTATTAACTTTTGTTGCACTTTTGTCCTTGTTATAGGTAACACGATTTCCTTCATGGTCTTCCTTTCTCCAATGTAAGTCTTGAACATTGCTTGATTATTTAAAATAGTTACAAGCTTAATTGTATAAATTTACTAAATTTATGATTAATAATTTTAACGTTCGATTAAATTTTACAGCCCAACCTTTTACCGGATTTACAAGAAGAAATCAACAGAAGAATTCCAAAGCATTCCATATGTGATAGCCTTCTTCAGCTGCATACTTTGGCTATTGTATGCCTATGTTAAGACTGATGTGCTCTTTCTGGTCACCATCAATGTCTTCGGTCTCTTCATAGAAACCATCTATATTGCTATCTTCGTCGTCTACGCCAACAAGAAAACAAGGGTACGTACATGCATGCATGAACCCGTGTTTAGTAAAAAAAAAAAAACATACCGACGTTTGTAGTGCACGTGCTAATTTTGTATAAACCAAATTAAATATAATGTTGCAGATCTCGACAATGAAGCAAATCATCCTTTTCAATGTTTTCGGGTTTGGTGTTATCTTCTTCTTCACGATGTTCATTGCAAAGACAACCCGTGTTCGGTTGTTGCTCCTCGGATGGATTTGCCTCATCTTCTCATTGTGTGTCTTCGTTGCTCCCCTAGGTGTTATGGTATGTACTACTACTACTACTACTACTACTTCTTCGTATGTATAACATGTCGAATTTCATTAGAAAAGTACTAATTATATTATTATTATTTTTATCTACAGAGGAAAGTCATCCGCACCAAGAGTGTTGAGTACATGCCATTCTTCCTCTCATTCTTCCTCACCATAAGTGCCGTTGTTTGGTTCTTCTACGGTCTCCTCAAACACGATGTCTACATCGCGGTAAGAACGAAGTAATTAAGTTACCTTTACCTTACACAAAAGTGTTAAAAATGGATCGACTTAATACGTTAGTAACTTATTATTTGCAAAAAAAACAGGTACCAAATGTGCTAGGTTTCACGTTCGGAATCGTACAAATGATCCTATACGCCATGTACCGTAACGCTAAGCCAACAGAGAAAGACATTGAAGTAGGAAAGACAACCAAGGACATTTCAACCGATAATCAAATCATAATCGAAGAGCCAGTGAAACCACAGGCTAAGACACTAACTACACCTCCAACTAACGACGGACTTTTCGCCATTCAAATCCCGAACCTCAGCATGGTTAACCTTCACAACAATGTAATTGATGATCAGCCAATGAAGATTAGTGGTATAAATAACCATACTCCACCACCAATCTCGGTCGCCGTTTAAGGATGATGCTTTTTCATGGCAATACAATGATCAAATAGCCTTTGCATGGACCGACCTCCATCACTTCCATGTAAAAGATCAACTGTCATGAGGGGCTATATCCTAAATTCCACATCTCTTTTCTCTCAATCAACTTTCTTTTTCATTTTTATTTTAACAACCCCCCTCATTTTTACCTTTTTTTATTTCTATTTTGATCCATAATTTAATCTTTTGTAATTTTTGTTTCCATCATATAATTAAAAATGTCAATAAATATTTGTATTTTCGCTTATATCGTATCATTGGTGTACGTACTTGATCATAATCTAATGCAAATATGCATTATTTAAGTTTTTCTTTTCGAGTTTTCCATATTTTTTGCAACAATTTTCTTAATTATGGATCTATCATATAACACTAATTAGTTACATAAACAAGCTAGTAAAATTTTCGACGAAAGTATTAAACATTAATTCATTCATCATAATGTAATCTAAGAAATGATATGATGGAGCAAGTTGAGATGAGTCGCCATAGCACTTTAAAGAAGATAAGTAGTGATAAGTTAG CAACAAGCAATTGCATTTACAGAGAGAAAGAGAGAAAACAAATACTTTCACTCTTCCAAAAAAAAAAAAAAGAGTAACCAAAATCAAAAACACAAAAAAAGAGATGGATTTTGCTCATTTCTTCGCACACCTTCCATGGATTACTATCTTTGGTCTCCTAGGTAACACGATTTCCTTCATGGTCTTCCTTTCTCCAATCCCAACCTTTTACCGGATTTACAAGAAGAAATCAACAGAAGAATTCCAAAGCATTCCATATGTGATAGCCTTCTTCAGCTGCATACTTTGGCTATTGTATGCCTATGTTAAGACTGATGTGCTCTTTCTGGTCACCATCAATGTCTTCGGTCTCTTCATAGAAACCATCTATATTGCTATCTTCGTCGTCTACGCCAACAAGAAAACAAGGATCTCGACAATGAAGCAAATCATCCTTTTCAATGTTTTCGGGTTTGGTGTTATCTTCTTCTTCACGATGTTCATTGCAAAGACAACCCGTGTTCGGTTGTTGCTCCTCGGATGGATTTGCCTCATCTTCTCATTGTGTGTCTTCGTTGCTCCCCTAGGTGTTATGAGGAAAGTCATCCGCACCAAGAGTGTTGAGTACATGCCATTCTTCCTCTCATTCTTCCTCACCATAAGTGCCGTTGTTTGGTTCTTCTACGGTCTCCTCAAACACGATGTCTACATCGCGGTACCAAATGTGCTAGGTTTCACGTTCGGAATCGTACAAATGATCCTATACGCCATGTACCGTAACGCTAAGCCAACAGAGAAAGACATTGAAGTAGGAAAGACAACCAAGGACATTTCAACCGATAATCAAATCATAATCGAAGAGCCAGTGAAACCACAGGCTAAGACACTAACTACACCTCCAACTAACGACGGACTTTTCGCCATTCAAATCCCGAACCTCAGCATGGTTAACCTTCACAACAATGTAATTGATGATCAGCCAATGAAGATTAGTGGTATAAATAACCATACTCCACCACCAATCTCGGTCGCCGTTTAAGGATGATGCTTTTTCATGGCAATACAATGATCAAATAGCCTTTGCATGGACCGACCTCCATCACTTCCATGTAAAAGATCAACTGTCATGAGGGGCTATATCCTAAATTCCACATCTCTTTTCTCTCAATCAACTTTCTTTTTCATTTTTATTTTAACAACCCCCCTCATTTTTACCTTTTTTTATTTCTATTTTGATCCATAATTTAATCTTTTGTAATTTTTGTTTCCATCATATAATTAAAAATGTCAATAAATATTTGTATTTTCGCTTATATCGTATCATTGGTGTACGTACTTGATCATAATCTAATGCAAATATGCATTATTTAAGTTTTTCTTTTCGAGTTTTCCATATTTTTTGCAACAATTTTCTTAATTATGGATCTATCATATAACACTAATTAGTTACATAAACAAGCTAGTAAAATTTTCGACGAAAGTATTAAACATTAATTCATTCATCATAATGTAATCTAAGAAATGATATGATGGAGCAAGTTGAGATGAGTCGCCATAGCACTTTAAAGAAGATAAGTAGTGATAAGTTAG ATGGATTTTGCTCATTTCTTCGCACACCTTCCATGGATTACTATCTTTGGTCTCCTAGGTAACACGATTTCCTTCATGGTCTTCCTTTCTCCAATCCCAACCTTTTACCGGATTTACAAGAAGAAATCAACAGAAGAATTCCAAAGCATTCCATATGTGATAGCCTTCTTCAGCTGCATACTTTGGCTATTGTATGCCTATGTTAAGACTGATGTGCTCTTTCTGGTCACCATCAATGTCTTCGGTCTCTTCATAGAAACCATCTATATTGCTATCTTCGTCGTCTACGCCAACAAGAAAACAAGGATCTCGACAATGAAGCAAATCATCCTTTTCAATGTTTTCGGGTTTGGTGTTATCTTCTTCTTCACGATGTTCATTGCAAAGACAACCCGTGTTCGGTTGTTGCTCCTCGGATGGATTTGCCTCATCTTCTCATTGTGTGTCTTCGTTGCTCCCCTAGGTGTTATGAGGAAAGTCATCCGCACCAAGAGTGTTGAGTACATGCCATTCTTCCTCTCATTCTTCCTCACCATAAGTGCCGTTGTTTGGTTCTTCTACGGTCTCCTCAAACACGATGTCTACATCGCGGTACCAAATGTGCTAGGTTTCACGTTCGGAATCGTACAAATGATCCTATACGCCATGTACCGTAACGCTAAGCCAACAGAGAAAGACATTGAAGTAGGAAAGACAACCAAGGACATTTCAACCGATAATCAAATCATAATCGAAGAGCCAGTGAAACCACAGGCTAAGACACTAACTACACCTCCAACTAACGACGGACTTTTCGCCATTCAAATCCCGAACCTCAGCATGGTTAACCTTCACAACAATGTAATTGATGATCAGCCAATGAAGATTAGTGGTATAAATAACCATACTCCACCACCAATCTCGGTCGCCGTTTAA MDFAHFFAHLPWITIFGLLGNTISFMVFLSPIPTFYRIYKKKSTEEFQSIPYVIAFFSCILWLLYAYVKTDVLFLVTINVFGLFIETIYIAIFVVYANKKTRISTMKQIILFNVFGFGVIFFFTMFIAKTTRVRLLLLGWICLIFSLCVFVAPLGVMRKVIRTKSVEYMPFFLSFFLTISAVVWFFYGLLKHDVYIAVPNVLGFTFGIVQMILYAMYRNAKPTEKDIEVGKTTKDISTDNQIIIEEPVKPQAKTLTTPPTNDGLFAIQIPNLSMVNLHNNVIDDQPMKISGINNHTPPPISVAV Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo08934.1 vs. NCBI nr
Match: gi|902234973|gb|KNA23669.1| (hypothetical protein SOVF_021930 [Spinacia oleracea]) HSP 1 Score: 535.4 bits (1378), Expect = 6.400e-149 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 1
BLAST of Spo08934.1 vs. NCBI nr
Match: gi|731334568|ref|XP_010678287.1| (PREDICTED: bidirectional sugar transporter SWEET12 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 479.2 bits (1232), Expect = 5.400e-132 Identity = 251/304 (82.57%), Postives = 272/304 (89.47%), Query Frame = 1
BLAST of Spo08934.1 vs. NCBI nr
Match: gi|1021048893|gb|KZN06673.1| (hypothetical protein DCAR_007510 [Daucus carota subsp. sativus]) HSP 1 Score: 276.2 bits (705), Expect = 7.000e-71 Identity = 144/243 (59.26%), Postives = 181/243 (74.49%), Query Frame = 1
BLAST of Spo08934.1 vs. NCBI nr
Match: gi|1021033203|gb|KZM90987.1| (hypothetical protein DCAR_021648 [Daucus carota subsp. sativus]) HSP 1 Score: 270.0 bits (689), Expect = 5.000e-69 Identity = 137/215 (63.72%), Postives = 170/215 (79.07%), Query Frame = 1
BLAST of Spo08934.1 vs. NCBI nr
Match: gi|460379176|ref|XP_004235340.1| (PREDICTED: bidirectional sugar transporter SWEET14-like [Solanum lycopersicum]) HSP 1 Score: 268.1 bits (684), Expect = 1.900e-68 Identity = 134/234 (57.26%), Postives = 180/234 (76.92%), Query Frame = 1
BLAST of Spo08934.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RXM9_SPIOL (Bidirectional sugar transporter SWEET OS=Spinacia oleracea GN=SOVF_021930 PE=3 SV=1) HSP 1 Score: 535.4 bits (1378), Expect = 4.500e-149 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 1
BLAST of Spo08934.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CBG8_BETVU (Bidirectional sugar transporter SWEET OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g112900 PE=3 SV=1) HSP 1 Score: 479.2 bits (1232), Expect = 3.800e-132 Identity = 251/304 (82.57%), Postives = 272/304 (89.47%), Query Frame = 1
BLAST of Spo08934.1 vs. UniProtKB/TrEMBL
Match: A0A162AW34_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007510 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 4.900e-71 Identity = 144/243 (59.26%), Postives = 181/243 (74.49%), Query Frame = 1
BLAST of Spo08934.1 vs. UniProtKB/TrEMBL
Match: A0A164VX85_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021648 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 3.500e-69 Identity = 137/215 (63.72%), Postives = 170/215 (79.07%), Query Frame = 1
BLAST of Spo08934.1 vs. UniProtKB/TrEMBL
Match: K4BJH3_SOLLC (Bidirectional sugar transporter SWEET OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 1.300e-68 Identity = 134/234 (57.26%), Postives = 180/234 (76.92%), Query Frame = 1
BLAST of Spo08934.1 vs. ExPASy Swiss-Prot
Match: SWT14_ORYSI (Bidirectional sugar transporter SWEET14 OS=Oryza sativa subsp. indica GN=SWEET14 PE=2 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 1.500e-65 Identity = 132/228 (57.89%), Postives = 172/228 (75.44%), Query Frame = 1
BLAST of Spo08934.1 vs. ExPASy Swiss-Prot
Match: SWT14_ORYSJ (Bidirectional sugar transporter SWEET14 OS=Oryza sativa subsp. japonica GN=SWEET14 PE=2 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 1.500e-65 Identity = 132/228 (57.89%), Postives = 172/228 (75.44%), Query Frame = 1
BLAST of Spo08934.1 vs. ExPASy Swiss-Prot
Match: SWT12_ARATH (Bidirectional sugar transporter SWEET12 OS=Arabidopsis thaliana GN=SWEET12 PE=1 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 3.100e-63 Identity = 135/232 (58.19%), Postives = 165/232 (71.12%), Query Frame = 1
BLAST of Spo08934.1 vs. ExPASy Swiss-Prot
Match: SWT15_ARATH (Bidirectional sugar transporter SWEET15 OS=Arabidopsis thaliana GN=SWEET15 PE=1 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 4.100e-63 Identity = 128/244 (52.46%), Postives = 175/244 (71.72%), Query Frame = 1
BLAST of Spo08934.1 vs. ExPASy Swiss-Prot
Match: SWT13_ORYSJ (Bidirectional sugar transporter SWEET13 OS=Oryza sativa subsp. japonica GN=SWEET13 PE=2 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.000e-61 Identity = 123/221 (55.66%), Postives = 163/221 (73.76%), Query Frame = 1
BLAST of Spo08934.1 vs. TAIR (Arabidopsis)
Match: AT5G23660.1 (homolog of Medicago truncatula MTN3) HSP 1 Score: 243.4 bits (620), Expect = 1.800e-64 Identity = 135/232 (58.19%), Postives = 165/232 (71.12%), Query Frame = 1
BLAST of Spo08934.1 vs. TAIR (Arabidopsis)
Match: AT5G13170.1 (senescence-associated gene 29) HSP 1 Score: 243.0 bits (619), Expect = 2.300e-64 Identity = 128/244 (52.46%), Postives = 175/244 (71.72%), Query Frame = 1
BLAST of Spo08934.1 vs. TAIR (Arabidopsis)
Match: AT3G48740.1 (Nodulin MtN3 family protein) HSP 1 Score: 235.3 bits (599), Expect = 4.800e-62 Identity = 128/224 (57.14%), Postives = 158/224 (70.54%), Query Frame = 1
BLAST of Spo08934.1 vs. TAIR (Arabidopsis)
Match: AT5G50790.1 (Nodulin MtN3 family protein) HSP 1 Score: 234.6 bits (597), Expect = 8.200e-62 Identity = 126/225 (56.00%), Postives = 170/225 (75.56%), Query Frame = 1
BLAST of Spo08934.1 vs. TAIR (Arabidopsis)
Match: AT2G39060.1 (Nodulin MtN3 family protein) HSP 1 Score: 219.2 bits (557), Expect = 3.600e-57 Identity = 126/275 (45.82%), Postives = 177/275 (64.36%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08934.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08934.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08934.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo08934.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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