Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGGATGATCCAGAATTCCAGAAATAGGAATAAAGCAGAGTAGCAGACCCAGAAAATTCCTTTGACTTTAAAAAAAAAAAAAAAAGGAAATAAGAAAAGAGATGCCATTACTTCCGTCTCCTATCCTGGCGTATCGTGCGCCTTATTTCAAGCACTTGACAAACTTCTCCTCCATTTTGCCACACCACCATCTTCCTCCTCTCCTGCTTCCACGTGTCCCCACCGCTTTCCTCCGGACTTTCTCTCTCTTTAACCCTTGCTCTCCTCTCTCCACCACGGGCAACTCTCTTCTCTCTCGCATGGAGGTTCTGTCTCTTAATTTCTTGCTTTTTTATTTATTCATTTGGGGTTATTTTAATTTATTTGTTTAAATTGTGTTTTTGTTCCTAGTTGTTTCAATATCCAGCTTGTTGATGGTAATATGGGTTCTTTGTAATTTGATCAAAAGTATCCACAAATAAATTGTTTATTTTGCTCTTAGTTTGACTCTTTTGATGATGATTCTGTCAAATTTTTGTTTTTAGGTAAGAAATGTGATCATAGTGGTTTGATTGTGTGGATATGGGTTGATTTTAATTACTCATAAGATGTTAATTTTTATTATTATGGTGGAAATGATAACTACCCCTTGGTTATTGACATTTGACAATTAAAACAAGTGCCTGACTAGGCTATTTTGTAAAAATTTCCATGCTTTTAGCCCAAATTGAAGTGTTCAAATCTCCATACCCATATTGGAGTGTCAAGGAGGTATTTGAGGTGAAATGAAGATGTGAATTGGTCTACATCACTGCTCTAAGTGGCTTCATATGCACCAAAAGGCTACTTAGATGCTGTATTTTTAGAAAAAAATAATGGATGTCCTGTAATTTGTGAAGGACTTGAATGTATTCAGTGGCTAATCATTCAAAGTTTATTCTTTTTACTGTTTGCAAAAGGTAGAGCTTTCAACAGATGATCTGAAAGCTTGGAAGGTTGGTGATTTTGTGGTTTCCTACAGATTTTTGTTGCTTCTAATAAGATTCTTGATTAGCAAGAGGAGATTTAGGTGCTTTGTTTGTCGTAATTGAGCTATTATGATTATTAGAGCTTTGAATAAACTCAGAGTAATGTTGATTAACCAAAAGTATTGAAGCTGGTATGTTTATGACAGAGTGTTGTTTTGGAATCTTTTGTTGGGGGTATGACTTCAAACTATCAGCATATCAACTGATGGATTTACCTGGGGTATTTCAGTCACTCAGACTTGGTTAATTTATGAAAATTTTACGTATTTTTGAGCCAGATGGAAATGCCAAGTGTCCATACTAATGTCGATTTGTCTAGCATCCAACACTAGGTTACTTGACGTGATATGAAGAGTCTGAGACTCGAGTTACATTGTTTGCATTGGAAATTGGCGCAAGAAGTACTATACTTGGACCAGCTACAAAGAGTACCTTTGTGTTAGTATATACATATGTTTTATTCTGATGATTTGGATTTTGGAGACAGCATAGGCATTTACAGATTTCCTACTTGGCTGCCTCTTAGAAAGTTTCTTTCAACTAGTTGCTAGTTATTTGCTTGTTGAGTTTGGTTAACCTTTGACTAATGTCCTTTCTTTGTTTGATGTTTTTAGTGTAACATTTATCTAGTTTTTGTGATTTATCTGCAGAAACCCTTTTCTGGTTCTGGAGGTGGCATGGCCAAAAGCAAAGCTATGGTGGAACAGTTGCGGCGTTGTGGAGTTTTTCACTCTGAGAAGGTTGCTGAAGTGATGGAAACCATTGATAGGGGTTTGTTTGTACCTGCTGGGACCCCGGCTTATATGGATAGCCCCATGCCAATAGGCCATAATGCCACCATATCAGCTCCTCATATGCATGCAATGTGCCTTGATCTTTTAAACGATAACTTGCAGCCTGGCATGCATGCTTTAGATGTTGGATCAGGTGATTTTCTTTATCTATGCTTGTTTATGGAGTCTCTCTTATTGCTATTTCAGTATATACTTTTTCAGTACAAGGTCATGAATGACAGGAATGATACTGACATGCTTGTGTGTCTGTTCTGCATGCAATGCCTCGTATGGTTTTCCATGCAATGCAATCTTCATGAGAAAGCAACATAATTTCTTTCATTTTCTCTACTACTCACTACTACGATGGTCATGGTTACACCTAGATTCCTAGAGATGTGGGTATGATTCATAATGATAATGAAGCACGGCAAATGCTAGCTATTAAAGATGCATTATTACGGACAATTGGACATTCCCTGAGACTTTTGACTAAGAATTACAAACTCATTCACTACTATTGTCTCAATTGATTACTTCATACTAGTCCTGCAGTTTTTAGGATCTTGTTAACATTTCTGCATTTTCTATATTTCTCCCATGCCCCTTGGAAGTAGACTTTGTAGAGACGAGAGAGAATTGGTGGTCACCAATTTTTTAATAGAAAGTGGTGTCATCATTGGTGTGGGAGTAGATGCATTAATGTGACAACTTTTATGGATATTTTTCTTCTGTTAAACCTTCCAAAGCCTTGAAGGCTTCTGCTATGCCTTTTTCATGTGACTTATTTATTTTCGCCTGAGAGAGCTTTTTCACAGAAGAGTAAAAGGAATAATTCTGGTTTCCCAACTTCTTCACCTTTTCCCAGTCTAATCACCCAAAGAATTCCTATGAGGGAAGGGAACAAGTTTTAATTGCGTCGAATCCATGCTCTCCGCAACCAGGAGGGCAATAATGTTTGTGTGATTGTTAAACTAAGGGTGCGTTCTATTCAACTGATTTTCACTTTTTTCTGAACTTATATTATCTGAACTTAACTGAACTTATTAAAACTTATCAAAACTTATTTTAGTTATAAGTTGTACTTGGCCCACCCTTATTTTTCCTGAACATATCTTAACTGAACTTATCTGAACTTAACTGAACTTATCTTAACTTATTTTCCCTGAAATAAGTGGAAATAAGGTGAACAGAACAGGGCCTAAGACGTGATGAAAGATTTTTTTTGCTTATGAAAGCAATTAAGTTGAATGAGCAAAACTAGGCTCAGTACTGATACCAAACAGCATATGATGAAGGGAAACCTTAGTGTTGGCCTATTTCAACTTTATTCATAAGAAATTGATTCAACAATATCAATGCCAAGTTATTAGCCTCACACCCTGTGCAAGTGAGTGACCTCGTTGGTATGGACTGCTTTACTCGCAGGCACAGGGTACTTGACTGCATGTTTTGCTGTGATGGTTGGATCCGAAGGTCGTGCAGTGGGTATAGAGCACATTCCTGAACTGGTGACTTGGTCAATTGAAAACATCAAAAAGAGTAAAGCTGCTTCTTTGCTAGAAGAGGGCTCCTTGTCAGTTCATGTTGGTGGTAAGATCTCAAACTGCTCACACATCTCCCTACAATTATACAATGTATGTTTCTTTCTTGCTTATTTATTCATATGTTACTCGTTCCGTGATATTATTGGTGACAGATGGAAGGCAAGGATATCCTGAGGATGCACCATATGATGCAATCCATGTTGGTGCAGCAGCACCAGAAATCCCAAAGGCGTTGATTGAGCAGCTGAAGCCCGGTGGACGGTTGGTGATACCAGTAGGAACCTTCTTCCAGGACTTGCAGGTTATTGACAAGAAGCAGGATGGCTCTCTTTCTGTCAGAACTGAAACTTCTGTGAGATATGTTCCACTGACTAGTCGGGAAGAGCAGTTGCGGGGTTAATTGAACTGCCTTTATCTATGTTCTATTTTGTGTATATTTAATGTTTTTTATTTTGTTTTTCATTTGCTGCGCGTTATCCATGAATTGGAAGCTTATAGCAGCATGTATTTTCCTCCCTTTTGTAAATATTTGACATCGTGGATGTAAAGTGTATCAAAGTTGGACACTGTACTTCATCAAAATGACGCTCCTTGTACTAGGCTAAAGTAAGCAGCAAGTGGATTGATTCGTTAAATTGTGGATGATACTAGAGGTACATAAAACAATGGCATTGGTTTTGAGAAATCAATTAGTTTTTTTTGCTTATTTTAGACAAATTATAC AATGGATGATCCAGAATTCCAGAAATAGGAATAAAGCAGAGTAGCAGACCCAGAAAATTCCTTTGACTTTAAAAAAAAAAAAAAAAGGAAATAAGAAAAGAGATGCCATTACTTCCGTCTCCTATCCTGGCGTATCGTGCGCCTTATTTCAAGCACTTGACAAACTTCTCCTCCATTTTGCCACACCACCATCTTCCTCCTCTCCTGCTTCCACGTGTCCCCACCGCTTTCCTCCGGACTTTCTCTCTCTTTAACCCTTGCTCTCCTCTCTCCACCACGGGCAACTCTCTTCTCTCTCGCATGGAGAAACCCTTTTCTGGTTCTGGAGGTGGCATGGCCAAAAGCAAAGCTATGGTGGAACAGTTGCGGCGTTGTGGAGTTTTTCACTCTGAGAAGGTTGCTGAAGTGATGGAAACCATTGATAGGGGTTTGTTTGTACCTGCTGGGACCCCGGCTTATATGGATAGCCCCATGCCAATAGGCCATAATGCCACCATATCAGCTCCTCATATGCATGCAATGTGCCTTGATCTTTTAAACGATAACTTGCAGCCTGGCATGCATGCTTTAGATGTTGGATCAGGCACAGGGTACTTGACTGCATGTTTTGCTGTGATGGTTGGATCCGAAGGTCGTGCAGTGGGTATAGAGCACATTCCTGAACTGGTGACTTGGTCAATTGAAAACATCAAAAAGAGTAAAGCTGCTTCTTTGCTAGAAGAGGGCTCCTTGTCAGTTCATGTTGGTGATGGAAGGCAAGGATATCCTGAGGATGCACCATATGATGCAATCCATGTTGGTGCAGCAGCACCAGAAATCCCAAAGGCGTTGATTGAGCAGCTGAAGCCCGGTGGACGGTTGGTGATACCAGTAGGAACCTTCTTCCAGGACTTGCAGGTTATTGACAAGAAGCAGGATGGCTCTCTTTCTGTCAGAACTGAAACTTCTGTGAGATATGTTCCACTGACTAGTCGGGAAGAGCAGTTGCGGGGTTAATTGAACTGCCTTTATCTATGTTCTATTTTGTGTATATTTAATGTTTTTTATTTTGTTTTTCATTTGCTGCGCGTTATCCATGAATTGGAAGCTTATAGCAGCATGTATTTTCCTCCCTTTTGTAAATATTTGACATCGTGGATGTAAAGTGTATCAAAGTTGGACACTGTACTTCATCAAAATGACGCTCCTTGTACTAGGCTAAAGTAAGCAGCAAGTGGATTGATTCGTTAAATTGTGGATGATACTAGAGGTACATAAAACAATGGCATTGGTTTTGAGAAATCAATTAGTTTTTTTTGCTTATTTTAGACAAATTATAC ATGCCATTACTTCCGTCTCCTATCCTGGCGTATCGTGCGCCTTATTTCAAGCACTTGACAAACTTCTCCTCCATTTTGCCACACCACCATCTTCCTCCTCTCCTGCTTCCACGTGTCCCCACCGCTTTCCTCCGGACTTTCTCTCTCTTTAACCCTTGCTCTCCTCTCTCCACCACGGGCAACTCTCTTCTCTCTCGCATGGAGAAACCCTTTTCTGGTTCTGGAGGTGGCATGGCCAAAAGCAAAGCTATGGTGGAACAGTTGCGGCGTTGTGGAGTTTTTCACTCTGAGAAGGTTGCTGAAGTGATGGAAACCATTGATAGGGGTTTGTTTGTACCTGCTGGGACCCCGGCTTATATGGATAGCCCCATGCCAATAGGCCATAATGCCACCATATCAGCTCCTCATATGCATGCAATGTGCCTTGATCTTTTAAACGATAACTTGCAGCCTGGCATGCATGCTTTAGATGTTGGATCAGGCACAGGGTACTTGACTGCATGTTTTGCTGTGATGGTTGGATCCGAAGGTCGTGCAGTGGGTATAGAGCACATTCCTGAACTGGTGACTTGGTCAATTGAAAACATCAAAAAGAGTAAAGCTGCTTCTTTGCTAGAAGAGGGCTCCTTGTCAGTTCATGTTGGTGATGGAAGGCAAGGATATCCTGAGGATGCACCATATGATGCAATCCATGTTGGTGCAGCAGCACCAGAAATCCCAAAGGCGTTGATTGAGCAGCTGAAGCCCGGTGGACGGTTGGTGATACCAGTAGGAACCTTCTTCCAGGACTTGCAGGTTATTGACAAGAAGCAGGATGGCTCTCTTTCTGTCAGAACTGAAACTTCTGTGAGATATGTTCCACTGACTAGTCGGGAAGAGCAGTTGCGGGGTTAA MPLLPSPILAYRAPYFKHLTNFSSILPHHHLPPLLLPRVPTAFLRTFSLFNPCSPLSTTGNSLLSRMEKPFSGSGGGMAKSKAMVEQLRRCGVFHSEKVAEVMETIDRGLFVPAGTPAYMDSPMPIGHNATISAPHMHAMCLDLLNDNLQPGMHALDVGSGTGYLTACFAVMVGSEGRAVGIEHIPELVTWSIENIKKSKAASLLEEGSLSVHVGDGRQGYPEDAPYDAIHVGAAAPEIPKALIEQLKPGGRLVIPVGTFFQDLQVIDKKQDGSLSVRTETSVRYVPLTSREEQLRG Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo08789.1 vs. NCBI nr
Match: gi|902169091|gb|KNA07602.1| (hypothetical protein SOVF_170280 [Spinacia oleracea]) HSP 1 Score: 598.6 bits (1542), Expect = 6.000e-168 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 1
BLAST of Spo08789.1 vs. NCBI nr
Match: gi|731368165|ref|XP_010695992.1| (PREDICTED: protein-L-isoaspartate O-methyltransferase-like isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 488.8 bits (1257), Expect = 6.700e-135 Identity = 258/314 (82.17%), Postives = 270/314 (85.99%), Query Frame = 1
BLAST of Spo08789.1 vs. NCBI nr
Match: gi|731368167|ref|XP_010695993.1| (PREDICTED: protein-L-isoaspartate O-methyltransferase-like isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 424.1 bits (1089), Expect = 2.000e-115 Identity = 209/235 (88.94%), Postives = 221/235 (94.04%), Query Frame = 1
BLAST of Spo08789.1 vs. NCBI nr
Match: gi|460381103|ref|XP_004236292.1| (PREDICTED: protein-L-isoaspartate O-methyltransferase 1 [Solanum lycopersicum]) HSP 1 Score: 385.2 bits (988), Expect = 1.000e-103 Identity = 198/287 (68.99%), Postives = 232/287 (80.84%), Query Frame = 1
BLAST of Spo08789.1 vs. NCBI nr
Match: gi|970013081|ref|XP_015067496.1| (PREDICTED: protein-L-isoaspartate O-methyltransferase 1-like [Solanum pennellii]) HSP 1 Score: 382.5 bits (981), Expect = 6.800e-103 Identity = 197/287 (68.64%), Postives = 234/287 (81.53%), Query Frame = 1
BLAST of Spo08789.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QK40_SPIOL (Protein-L-isoaspartate O-methyltransferase OS=Spinacia oleracea GN=SOVF_170280 PE=3 SV=1) HSP 1 Score: 598.6 bits (1542), Expect = 4.200e-168 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 1
BLAST of Spo08789.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E2C9_BETVU (Protein-L-isoaspartate O-methyltransferase OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g177100 PE=3 SV=1) HSP 1 Score: 488.8 bits (1257), Expect = 4.700e-135 Identity = 258/314 (82.17%), Postives = 270/314 (85.99%), Query Frame = 1
BLAST of Spo08789.1 vs. UniProtKB/TrEMBL
Match: K4BK44_SOLLC (Protein-L-isoaspartate O-methyltransferase OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 7.300e-104 Identity = 198/287 (68.99%), Postives = 232/287 (80.84%), Query Frame = 1
BLAST of Spo08789.1 vs. UniProtKB/TrEMBL
Match: M1B870_SOLTU (Protein-L-isoaspartate O-methyltransferase OS=Solanum tuberosum GN=PGSC0003DMG400015226 PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 3.400e-101 Identity = 195/287 (67.94%), Postives = 231/287 (80.49%), Query Frame = 1
BLAST of Spo08789.1 vs. UniProtKB/TrEMBL
Match: A0A022PPV1_ERYGU (Protein-L-isoaspartate O-methyltransferase OS=Erythranthe guttata GN=MIMGU_mgv1a010627mg PE=3 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 9.800e-101 Identity = 200/292 (68.49%), Postives = 229/292 (78.42%), Query Frame = 1
BLAST of Spo08789.1 vs. ExPASy Swiss-Prot
Match: PIMT_WHEAT (Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum GN=PCM PE=1 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 4.300e-89 Identity = 161/221 (72.85%), Postives = 187/221 (84.62%), Query Frame = 1
BLAST of Spo08789.1 vs. ExPASy Swiss-Prot
Match: PIMT2_ARATH (Protein-L-isoaspartate O-methyltransferase 2 OS=Arabidopsis thaliana GN=PIMT2 PE=1 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 5.600e-89 Identity = 163/242 (67.36%), Postives = 199/242 (82.23%), Query Frame = 1
BLAST of Spo08789.1 vs. ExPASy Swiss-Prot
Match: PIMT1_ARATH (Protein-L-isoaspartate O-methyltransferase 1 OS=Arabidopsis thaliana GN=PIMT1 PE=1 SV=3) HSP 1 Score: 323.6 bits (828), Expect = 2.300e-87 Identity = 158/224 (70.54%), Postives = 188/224 (83.93%), Query Frame = 1
BLAST of Spo08789.1 vs. ExPASy Swiss-Prot
Match: PIMT_MOUSE (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus musculus GN=Pcmt1 PE=1 SV=3) HSP 1 Score: 223.0 bits (567), Expect = 4.300e-57 Identity = 121/220 (55.00%), Postives = 150/220 (68.18%), Query Frame = 1
BLAST of Spo08789.1 vs. ExPASy Swiss-Prot
Match: PIMT_CHICK (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus gallus GN=PCMT1 PE=2 SV=3) HSP 1 Score: 222.2 bits (565), Expect = 7.300e-57 Identity = 121/220 (55.00%), Postives = 151/220 (68.64%), Query Frame = 1
BLAST of Spo08789.1 vs. TAIR (Arabidopsis)
Match: AT5G50240.1 (protein-l-isoaspartate methyltransferase 2) HSP 1 Score: 328.9 bits (842), Expect = 3.100e-90 Identity = 163/242 (67.36%), Postives = 199/242 (82.23%), Query Frame = 1
BLAST of Spo08789.1 vs. TAIR (Arabidopsis)
Match: AT3G48330.1 (protein-l-isoaspartate methyltransferase 1) HSP 1 Score: 323.6 bits (828), Expect = 1.300e-88 Identity = 158/224 (70.54%), Postives = 188/224 (83.93%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08789.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08789.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08789.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo08789.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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