Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTACTTAATAATCTGAATTGATAACCAATCAGTGTTTTTTCTTTGTAATTTTTTTAATTTTTTTGTAAAACAAAATTGTCTTTTAGAAATGTCAAGGCCGGATAAAGGGATCACATCCACTAAAAACAGAGACATAAATTGTTTAAATTGGGGAGAAAAAAAGAGCAAACCACACCAAAAAAATTCCATTATGGGAGAAGAGAGCTCAGTAAAGCTACATGGAATGTGGGCAAGTCCATTTGTTTTGAGAGCTAAAATTGCCCTTAAAATAAAAGGGATAGAGTTTGAGTATATTGAGGAAGATCTAGCCAACAAAAGTGAGTTGCTCTTGCAATATAACCCTGTGCACAAGAAAGTCCCTGTTCTTGTGCACAATGGTCTACCTATTTCCGAGTCGTTGATCATCCTCGAATATATTGATGAGACTTGGACTCAACCCCCACATCTCCTGCCTAATGATCCTTACCTAAAGGCCAAACACCGCTTCTGGGCTGCGTATTTACAACAGGTAAGCTCCTCGCTCCATGATCCTCTGTTACTTTATTTTATGGTAACTCCTTTTAGGAAAGTTTATAATGAGATGGTTGGAAATAATGCATTGTAACCATGAAAAATAACAATAAAATAATAGGGAAGAAACACAATACTTAATAATTGATCTCAAAAGCTGTGACGGGTTTTACGCCTGCCCTAGAAGCGTATTTCGCCACCACCGGTACAAGGTTCTCAGTGACGATTGCTCCCCAAGGGTAACACAGCTACCTTCCAACTCTGTACCCCGATTGGAAGACTGGAATTACTTCAAGAACTGCTCAGATCTCTATGGGACAATAATAATCGAGATAATATTTTTTAGGGTTTTTTGTTTCTCTATATCTCTAGGTAGTTTTATTGGAATAAATAAAAGAGTATTTATAAGGAATCTGGTATAAACCGTAACTCCTAAACGATACTCCAAAAACCAATACCCAAGACAACAATGAAACGGGCCCACAAGCATTATCATATTTAAAGGGGTCCGTATTGCATTATAATTACCAACAGAGATAATAATAGAATCTTTATCATTAGGCCTGGTTATTGGGTGTTCAGGGCGTCAATACCTTATAAACTAACAGCGCGTCTCCTGTGAGACCAGTCACACCATCAACTTGATGGTGTGACGAGCATGAAACCAATAGCGTACCTCCCCTAAAACTATATATAAAAAAGTAACAGATCTAAACTATATAAGTAACATACCTAAACTTAAAAAGTACCTCCTCTAAAATTATATATAAAAAAAAGTAACATGTCTAAACTATAGAAGTAACATACCTAAACTAAAAATGTACCTCCCCTAAAACTATTCCGTATAAAAAAAAGTAACATGTCTAAACTATAGAAGTAACATACCTAAACTAAAAAAGTACTTCATCTAAAATTATAAAAAAAAGTAACATGTCTAAATTATAGAAGTAATACATAAACTAAAAAGGTACCTCCCCTAAAACTAATCCGTATAAAAAAAGTAACATGTCTAAACTATAGAAGTAACATACCTAAACTAAAAAAGTACTTCATCTAAAATTATAAAAAAAAGTAACATGTCTAAATTATAGAAGTAATACATAAACTAAAAAGGTACCTCCCCTAAAACTAATCCGTATAAAAAAAGTAACATGTCTAAACTATAGAAGTAACATACCTAAACTAAAAGGTACATGCCCTAAAACTACTCCGTATAAAAAAAAAGTAACATGTCTAAACTATAGAAGTAACATACCTAAACTAAAAAAAATACCTCCTCTAAAATTATTAAAAAAAAAAAGTAACATGTCTAAACTATAGAAGTAACATACCTAAATTCGCAATTAGTGTGAACTGGTCTCACTATCAGTTGATGGTGAGGACAGTCTCATATAAGAATTTGGGATAAACTAATACCCTGTAAAGCTGCCCATTAAGAAGGTAAAGAATCAAGAACCTTTTAAATTGGTATGACTCTGCTATCCATTGAATTATCCTGTCCAATAATCTGACCTATTTATCATATAACTTGAGAACCCTGTTTTTTAATACTAACAAACCGAATTTTTTGTCCATCAGTCTCAAGGTACAAACGCATATTCGAAGAAGTAACTTTTGTTGTTCTATTCACAAGAACCTTAACAATAACAAGGACATGTATCAAGCTTTATATACTTTCGTTGACATGAAATAATAATCACATATGTAGTATTATTGTTCGGAAAAAATGGTCACCTTTTTCTAAAATTGTTATAGTTTGCCTTAAATTTATTAGGGAATATGATAAAATTTACACTTGTACACATAATTCGTTTGTGAAACCGTGTCCATATGCTTAATCACGACCCCAGAGATTGACACGAAATGACAACTTATTGATTCCCAATAGAGGGAGTATACCTTTTTTTGTGTCACTATTTGTTGCCCCCATACCTTATTTATTAACTTTATCCACTTTACTAATCCACAATTCCACATACACATTTTACACCCCAAAGTTAATAAAGTGAAGTTAACTTTATAGGTCAATCTTTTAGAGACGAGAGGGAGTAACAGAAAAGTCAATAGTTAACCCGGGCTGTGTTGTATGTATTGGCAGATAGCGGAGAGCTTGAGTAAGTCACTATTTACAGAAGGTGAAGCAATAGAGGAAAAGATAAACGAGTACTTGAAAAAGATGGATGTGGCGGAAGAATTAATGAAGGCTGAGAATGATGATAGTCCATCTTTCCAGGATTTGAAACCGGGATACTTGGATATAGTGTTGTATTCCCTCTTAGGAACCTATGATATTGTGGAAGAGGTATTTGGCTTTAAGACTTTCACTGCAGAAAGGTACCCATTCTTGGCGTCTTGGATCAACGCATTGAGTCAAGTTCCTGAAATTAAAGACTCGGCACCACCAAAGCTTAAGCTCATTGAACATCTTCGTGTTATACGACAAATATATTCAACATCAAAGGCATAAATATATGATCATTATCAGTTCCTGTTTTATTTACAATTTTCATTTCTATTGGATCGAGTTGCAGAATAAATTGTGTGCCCTTAGTATTACTACTGTAATAAATCGTTAAGTATTTGAATCAATCATATGTAGTATATACAACTACTCCCTCCGTTTCTTTTTGTTGGTAACGTTTTGATGTATATAATTGTGAGAATTTACGGTAAATGATTTCATACTTTGAACACACATCTCAAAGCGTAAGGAACTTTCAGGAACGGATGTAGTATATTACAATTAGTTGCATTCAAAAAATGCAAATTACTTGATAAATAGATTCTTATTACACCAATATTGACCATGGACTCGAACATTTTCAGCACACAAAGATGATAAAATCAAAGAAATGAACACCTTAAAACCACTAAATGAACCTCATTTGATCATGTGGAGTTGTGGACCATTTTTTAAGAGCGGCCACAAGTGTGTCATGGGATAGGGTGGGATGCTCTCTTTGATCACGGGCAGG TTTACTTAATAATCTGAATTGATAACCAATCAGTGTTTTTTCTTTGTAATTTTTTTAATTTTTTTGTAAAACAAAATTGTCTTTTAGAAATGTCAAGGCCGGATAAAGGGATCACATCCACTAAAAACAGAGACATAAATTGTTTAAATTGGGGAGAAAAAAAGAGCAAACCACACCAAAAAAATTCCATTATGGGAGAAGAGAGCTCAGTAAAGCTACATGGAATGTGGGCAAGTCCATTTGTTTTGAGAGCTAAAATTGCCCTTAAAATAAAAGGGATAGAGTTTGAGTATATTGAGGAAGATCTAGCCAACAAAAGTGAGTTGCTCTTGCAATATAACCCTGTGCACAAGAAAGTCCCTGTTCTTGTGCACAATGGTCTACCTATTTCCGAGTCGTTGATCATCCTCGAATATATTGATGAGACTTGGACTCAACCCCCACATCTCCTGCCTAATGATCCTTACCTAAAGGCCAAACACCGCTTCTGGGCTGCGTATTTACAACAGATAGCGGAGAGCTTGAGTAAGTCACTATTTACAGAAGGTGAAGCAATAGAGGAAAAGATAAACGAGTACTTGAAAAAGATGGATGTGGCGGAAGAATTAATGAAGGCTGAGAATGATGATAGTCCATCTTTCCAGGATTTGAAACCGGGATACTTGGATATAGTGTTGTATTCCCTCTTAGGAACCTATGATATTGTGGAAGAGGTATTTGGCTTTAAGACTTTCACTGCAGAAAGGTACCCATTCTTGGCGTCTTGGATCAACGCATTGAGTCAAGTTCCTGAAATTAAAGACTCGGCACCACCAAAGCTTAAGCTCATTGAACATCTTCGTGTTATACGACAAATATATTCAACATCAAAGGCATAAATATATGATCATTATCAGTTCCTGTTTTATTTACAATTTTCATTTCTATTGGATCGAGTTGCAGAATAAATTGTGTGCCCTTAGTATTACTACTGTAATAAATCGTTAAGTATTTGAATCAATCATATGTAGTATATACAACTACTCCCTCCGTTTCTTTTTGTTGGTAACGTTTTGATGTATATAATTGTGAGAATTTACGGTAAATGATTTCATACTTTGAACACACATCTCAAAGCGTAAGGAACTTTCAGGAACGGATGTAGTATATTACAATTAGTTGCATTCAAAAAATGCAAATTACTTGATAAATAGATTCTTATTACACCAATATTGACCATGGACTCGAACATTTTCAGCACACAAAGATGATAAAATCAAAGAAATGAACACCTTAAAACCACTAAATGAACCTCATTTGATCATGTGGAGTTGTGGACCATTTTTTAAGAGCGGCCACAAGTGTGTCATGGGATAGGGTGGGATGCTCTCTTTGATCACGGGCAGG ATGTCAAGGCCGGATAAAGGGATCACATCCACTAAAAACAGAGACATAAATTGTTTAAATTGGGGAGAAAAAAAGAGCAAACCACACCAAAAAAATTCCATTATGGGAGAAGAGAGCTCAGTAAAGCTACATGGAATGTGGGCAAGTCCATTTGTTTTGAGAGCTAAAATTGCCCTTAAAATAAAAGGGATAGAGTTTGAGTATATTGAGGAAGATCTAGCCAACAAAAGTGAGTTGCTCTTGCAATATAACCCTGTGCACAAGAAAGTCCCTGTTCTTGTGCACAATGGTCTACCTATTTCCGAGTCGTTGATCATCCTCGAATATATTGATGAGACTTGGACTCAACCCCCACATCTCCTGCCTAATGATCCTTACCTAAAGGCCAAACACCGCTTCTGGGCTGCGTATTTACAACAGATAGCGGAGAGCTTGAGTAAGTCACTATTTACAGAAGGTGAAGCAATAGAGGAAAAGATAAACGAGTACTTGAAAAAGATGGATGTGGCGGAAGAATTAATGAAGGCTGAGAATGATGATAGTCCATCTTTCCAGGATTTGAAACCGGGATACTTGGATATAGTGTTGTATTCCCTCTTAGGAACCTATGATATTGTGGAAGAGGTATTTGGCTTTAAGACTTTCACTGCAGAAAGGTACCCATTCTTGGCGTCTTGGATCAACGCATTGAGTCAAGTTCCTGAAATTAAAGACTCGGCACCACCAAAGCTTAAGCTCATTGAACATCTTCGTGTTATACGACAAATATATTCAACATCAAAGGCATAA MSRPDKGITSTKNRDINCLNWGEKKSKPHQKNSIMGEESSVKLHGMWASPFVLRAKIALKIKGIEFEYIEEDLANKSELLLQYNPVHKKVPVLVHNGLPISESLIILEYIDETWTQPPHLLPNDPYLKAKHRFWAAYLQQIAESLSKSLFTEGEAIEEKINEYLKKMDVAEELMKAENDDSPSFQDLKPGYLDIVLYSLLGTYDIVEEVFGFKTFTAERYPFLASWINALSQVPEIKDSAPPKLKLIEHLRVIRQIYSTSKA Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo08169.1 vs. NCBI nr
Match: gi|902211217|gb|KNA16650.1| (hypothetical protein SOVF_087210 [Spinacia oleracea]) HSP 1 Score: 456.8 bits (1174), Expect = 2.500e-125 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1
BLAST of Spo08169.1 vs. NCBI nr
Match: gi|902211219|gb|KNA16652.1| (hypothetical protein SOVF_087230 [Spinacia oleracea]) HSP 1 Score: 330.5 bits (846), Expect = 2.700e-87 Identity = 165/232 (71.12%), Postives = 191/232 (82.33%), Query Frame = 1
BLAST of Spo08169.1 vs. NCBI nr
Match: gi|902211218|gb|KNA16651.1| (hypothetical protein SOVF_087220 [Spinacia oleracea]) HSP 1 Score: 327.0 bits (837), Expect = 3.000e-86 Identity = 164/224 (73.21%), Postives = 185/224 (82.59%), Query Frame = 1
BLAST of Spo08169.1 vs. NCBI nr
Match: gi|11890749|gb|AAG41204.1| (glutathione transferase [Suaeda maritima]) HSP 1 Score: 319.3 bits (817), Expect = 6.200e-84 Identity = 159/231 (68.83%), Postives = 188/231 (81.39%), Query Frame = 1
BLAST of Spo08169.1 vs. NCBI nr
Match: gi|731335049|ref|XP_010678531.1| (PREDICTED: glutathione S-transferase U9-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 319.3 bits (817), Expect = 6.200e-84 Identity = 153/229 (66.81%), Postives = 187/229 (81.66%), Query Frame = 1
BLAST of Spo08169.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAZ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_087210 PE=4 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 1.700e-125 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1
BLAST of Spo08169.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RCX6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_087230 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 1.900e-87 Identity = 165/232 (71.12%), Postives = 191/232 (82.33%), Query Frame = 1
BLAST of Spo08169.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAY8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_087220 PE=3 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 2.100e-86 Identity = 164/224 (73.21%), Postives = 185/224 (82.59%), Query Frame = 1
BLAST of Spo08169.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CB38_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g114860 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 4.300e-84 Identity = 153/229 (66.81%), Postives = 187/229 (81.66%), Query Frame = 1
BLAST of Spo08169.1 vs. UniProtKB/TrEMBL
Match: Q9FPL4_SUAMA (Glutathione transferase OS=Suaeda maritima PE=2 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 4.300e-84 Identity = 159/231 (68.83%), Postives = 188/231 (81.39%), Query Frame = 1
BLAST of Spo08169.1 vs. ExPASy Swiss-Prot
Match: GSTU9_ARATH (Glutathione S-transferase U9 OS=Arabidopsis thaliana GN=GSTU9 PE=2 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.000e-49 Identity = 101/224 (45.09%), Postives = 150/224 (66.96%), Query Frame = 1
BLAST of Spo08169.1 vs. ExPASy Swiss-Prot
Match: GSTUA_ARATH (Glutathione S-transferase U10 OS=Arabidopsis thaliana GN=GSTU10 PE=2 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 6.300e-44 Identity = 93/220 (42.27%), Postives = 132/220 (60.00%), Query Frame = 1
BLAST of Spo08169.1 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.000e-41 Identity = 96/227 (42.29%), Postives = 138/227 (60.79%), Query Frame = 1
BLAST of Spo08169.1 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.000e-38 Identity = 90/213 (42.25%), Postives = 124/213 (58.22%), Query Frame = 1
BLAST of Spo08169.1 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.800e-38 Identity = 90/214 (42.06%), Postives = 131/214 (61.21%), Query Frame = 1
BLAST of Spo08169.1 vs. TAIR (Arabidopsis)
Match: AT5G62480.1 (glutathione S-transferase tau 9) HSP 1 Score: 198.4 bits (503), Expect = 5.600e-51 Identity = 101/224 (45.09%), Postives = 150/224 (66.96%), Query Frame = 1
BLAST of Spo08169.1 vs. TAIR (Arabidopsis)
Match: AT1G74590.1 (glutathione S-transferase TAU 10) HSP 1 Score: 179.1 bits (453), Expect = 3.500e-45 Identity = 93/220 (42.27%), Postives = 132/220 (60.00%), Query Frame = 1
BLAST of Spo08169.1 vs. TAIR (Arabidopsis)
Match: AT2G29450.1 (glutathione S-transferase tau 5) HSP 1 Score: 160.6 bits (405), Expect = 1.300e-39 Identity = 96/224 (42.86%), Postives = 131/224 (58.48%), Query Frame = 1
BLAST of Spo08169.1 vs. TAIR (Arabidopsis)
Match: AT2G29420.1 (glutathione S-transferase tau 7) HSP 1 Score: 156.4 bits (394), Expect = 2.500e-38 Identity = 97/227 (42.73%), Postives = 133/227 (58.59%), Query Frame = 1
BLAST of Spo08169.1 vs. TAIR (Arabidopsis)
Match: AT3G09270.1 (glutathione S-transferase TAU 8) HSP 1 Score: 155.2 bits (391), Expect = 5.500e-38 Identity = 87/221 (39.37%), Postives = 129/221 (58.37%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08169.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08169.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08169.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo08169.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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