Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAACCTCCGTCAGTCGTTGATGATTATGGCCTATGGGCCCTAAATCAAGCGGATAATAACCCAAGTCAAGTTTTATTGAATCGTGTAAAGCTTCCAAACGTGAACAGACAACAACTTACTACTAATACTTCGCCACATTTCTTTAGCACTTCCTTCCTCTGCAATTTCCAACTCATTTAGAATTCTCTCACCTCTTCGTCTAGGGTTTTCTCCTTTCTCTCTCCAAACTCTTCAACATGAGGTAATCTCCCTTTTTCTCTCTCCTCTTTTTTCAATCTTCTTAATCCTTCAATACTCTACTTTCTGCTTCATTTCGCTCAATTGTGTTTAGTTTACAGTTTTGATTTGCCATTTTTGAAAAAAATGACGGCGAGGTTTTAGGTTTTATCGTTATTTTGCTTCATTGATTGTGTATCTCTTTTGTCAGTGTTTCTTTCAATTTTTCAGGCACTGTTGTGTTTTGTAGATTTGGTTTAAATTCTGCTCTAAGTTTAGAAAATGTGAAATTGATTGTGCTTTTTGATTTTAGGGTTTAGGGTTTAGGGTTTTAACATTTCTGGGTTGATACTTTATACTATAAATCTGGTGCTGTGTTGTAGCATATCTTCTTTTGCTTCTCTTGAATTCTTAATGTTGAAAGATTGATAATAGATTGGAATGTGAAGGACGGGATAAAAAGGTTTGTGGGGATCTTTAGTTTTTATGCGGAGACTCTTCCCATGACTAATAGAGGTTAAATATATGAAGTTCCTGTAAGGAAACAATCGTTTTTGCTGTGCTTTTGGGGTTTTCTCGGTGGCCCTGAAGTCTAGGCCGCACATTTTGCTACATTGTTGGACAATATGATTACTTGCAAAGTTGCAATTGGTATTTTTGTCCATCTTAGGGGGTGGGTGGGTTGATGAATGATCAAATGTGCTTAGTTAAGCCTGAATGGGAATAACAAGTTAACAACCCCCTCTTCAATAAATTTATTGAGAATGTGGTTGAGGTTGGGATTAGTCCCAATTCGATAAAGTACTTGAGAATGTTCTTGATATTTTGATTTGAAATGTGAGATCTTATGTGATGGGACACTTATCACTTTGCAACTCTAGGAAATGACATATCAGTTATATAAGTTCTCGCTTGTGCTGGTCTTTTACTTCCTAAAGCTTTTGAAATGGGTGCCAAACAAGAAATGGTTGAATTATTCAACGCATCTGAGTGCATGATTTGTGTAATTTTATTTATATAAATCCATCTAAAATCTTCTTTGAATAATTTCTAAGCACGCACTCGTCACTTCTGAACTAGGTAGTGAAAATTTGTTTGTTGTAGATTTGTAGCCATGTTTGACAGTTTAAGAAACATTTGCAGTCAATTTGAACTGGCTCAAACTTTTTTTTTTCTTCTGATAAACACTTCTTCTGTTAAATCACTCCCCATTCTTTCTTATGTAGTCGTCATCCTGAAGTAAAATGGGCTGAGAGGGAAGACAAAGTGTACCTGACTGTGATGCTGCCTGATGCAAAAGACCCAAAAGTTAATCTGGACGCTGAAGGAACTTTTACCTTTGCTGCTTCTGGTGGGGCTGGCGATAATGCTTATGAACTGAAACTGGATCTCTTTGACAAGGTCGATGTAGAGGTATGGTTCATGAATCTTATGATTGACTCCATGATAACATTTTTTAATTTATCAGAGCTTGTTTTAACCTTTCACATTGACTTGGTATGTATTTGGGAACAGAGTCACTCTAGCCAAGTAATTTCTGCTTTCTAGCAATTTGTAGTGTGCACACCTTTTTCTGCACAACTCATGATCCTTGGCGTTCTTATGTATGTAAAATGCTATTATGTTTTATATGGTTCCAAGGTGAAGGGAACCCTCCTATAGGGAAATAGAATAACTAGATAAGGATATACCACCGTAGTCATTGGAACTAATGGAGCTATTCCATTACCTAAAAGAACATTCTTTGAAAGATTTGCAACTCACCATCACCGTCCTATACTCCTATGAAAAGTCCATTCCCTAGCATGTGCTCAATAATCACATTGTAAGCGTAGTCCATCGGCATATAGTTGAGGCCTTGGAGAGGAACATAAGTGTGGGGTTCGTGGCCTTACAGCTAAGACGAGGAAATGATCATGGGAAGGATGTATTTTTGGAGCTTTTTTTATGGGAAGTTATTGTAGTTCCCATTAATTAACTGAATGTATAACTATGTGGTCCGGGATTCAGTCTCTGTTCTTTGTTTATAACACTTTTATGAATATATTTCTGGAGTTCAATTGTTTGGTTTGCTCATAAGTTTTGTTTTCCGTTGTTTTAGGAAAGCAAAATTAGTTACAACGTCAGAAGCATATTTTGTGTTCTGGAGAAGGCAGAGAAGAAATGGTGGAATAGGCTTCTGCGTGGTGATGGTAAGGTTCCACATTACGTGAAGGTTGATTGGGACAAGTGGGTAGATGAAGATGAGGATGTTGGTAGTGCTGAACCTGGCGGTAATGGTATGTGTGGTTTGTTCATGTGGTACTTTTCTTGACATCTGTTGCTAAAACACTGTAAATTGACCCAAAAAAATCTTTGCTTTGTCAGGACCAGCAGACTTCGATCTTGGGGGAATGGACTTCTCGGTAAGTGTTGTTTGTGCTTTGTTTACATATTTATACCTTTTCATTTTGTTTTGATGTCCTGATTTATTTTGAATTTGCAGAAATTTGGAGATTTTGGTGGTGCTGGTGCTGGAGGCTTCCCTGGTGCTGGAGGCTTTCCCGGTGCTGGAGATTTTGGTGGTGCAGGTGGTGGTGATGAATTTGATGATAGTGATGATGATGGTAAGTATATTCTTAGTACCCTGCGGCTTGCCCTCCACATCTGCACTGTTTTATAAATAAAACATTCACATGATGAACAACTTTTCTTAGTTAGAAATTCCTGCTCCGGTAGTCCAGTGTTCTACTGCAACAATGTGGTAATATTTGACATGACCTGCAGGTTTTATTTATCTGGACTTTAATTTGAGCAGACTCATTCCCTAAGATTGACAAACATTATACTTCTGTAAAAATTTAGAAAATCTTTTTTCATCTCGAAAACATCCGCAAACTATTATAACACTTCACATTTCAGCACCCTTCTTTCCTTCTATATGACCAAGTTGGTAGGTTATTTCCCTCGACCTGTAAGTAGTTTAAAACCAAGTCGCTTTGTACGTAGGCTACAACACAAAGATCTTATAATGTTCCTAAAAACAGTAGCTCAACAATTTACCACTACAACTATCATATGTTAGTTTAGCTCTGTTATTCTCTCTTTTAACTCTTTTCCTCGTGTTTGTTCACCATGTTAAGTTGTGCATATGTAATTCCAAACTTTGGGACTATTCATGTAAAATTTTCCATTATTTATTTACTTGTAGTGAACAAACTTGTTAACTGAATTCCATTGTATTATGTTATGCAGAGCAAGAAGTGTCTAAACCAGAGGAAGGTGCTGGAGAGAAGCCGGTGGAAGCACCTACTGCAGAGAAGACTGAAGCTTAGGATATGTAGTAAGGAAACTAGCCACATATTTGTTATGTGAGTGACTTCGGATATTTGTTATCGTATTAGAATATGTAAACGGTGGAAAAAATTGATAGACATGCTTGAGATGTGAATCAGTTTTTCTGTGATCATTGGTAACTACGATAATTTTTTGTCCTAAATGTATCCTGTATCCTTTAGTACTCCACATGTGTCTTACAACTACTCCCTTCATGGCTTCATCCCATAATATAGTGTCCGTTTTCATTTTTGATTTTCCTAAATGTCGTGTCTACTTTGATTATTTTCTATTTAATCAATTGATTTTTACCAACTTACCCTTATCATACAATTTAAATACCAAGATTTTCTTACTTTTAGC AAAACCTCCGTCAGTCGTTGATGATTATGGCCTATGGGCCCTAAATCAAGCGGATAATAACCCAAGTCAAGTTTTATTGAATCGTGTAAAGCTTCCAAACGTGAACAGACAACAACTTACTACTAATACTTCGCCACATTTCTTTAGCACTTCCTTCCTCTGCAATTTCCAACTCATTTAGAATTCTCTCACCTCTTCGTCTAGGGTTTTCTCCTTTCTCTCTCCAAACTCTTCAACATGAGTCGTCATCCTGAAGTAAAATGGGCTGAGAGGGAAGACAAAGTGTACCTGACTGTGATGCTGCCTGATGCAAAAGACCCAAAAGTTAATCTGGACGCTGAAGGAACTTTTACCTTTGCTGCTTCTGGTGGGGCTGGCGATAATGCTTATGAACTGAAACTGGATCTCTTTGACAAGGTCGATGTAGAGGAAAGCAAAATTAGTTACAACGTCAGAAGCATATTTTGTGTTCTGGAGAAGGCAGAGAAGAAATGGTGGAATAGGCTTCTGCGTGGTGATGGTAAGGTTCCACATTACGTGAAGGTTGATTGGGACAAGTGGGTAGATGAAGATGAGGATGTTGGTAGTGCTGAACCTGGCGGTAATGGACCAGCAGACTTCGATCTTGGGGGAATGGACTTCTCGAAATTTGGAGATTTTGGTGGTGCTGGTGCTGGAGGCTTCCCTGGTGCTGGAGGCTTTCCCGGTGCTGGAGATTTTGGTGGTGCAGGTGGTGGTGATGAATTTGATGATAGTGATGATGATGAGCAAGAAGTGTCTAAACCAGAGGAAGGTGCTGGAGAGAAGCCGGTGGAAGCACCTACTGCAGAGAAGACTGAAGCTTAGGATATGTAGTAAGGAAACTAGCCACATATTTGTTATGTGAGTGACTTCGGATATTTGTTATCGTATTAGAATATGTAAACGGTGGAAAAAATTGATAGACATGCTTGAGATGTGAATCAGTTTTTCTGTGATCATTGGTAACTACGATAATTTTTTGTCCTAAATGTATCCTGTATCCTTTAGTACTCCACATGTGTCTTACAACTACTCCCTTCATGGCTTCATCCCATAATATAGTGTCCGTTTTCATTTTTGATTTTCCTAAATGTCGTGTCTACTTTGATTATTTTCTATTTAATCAATTGATTTTTACCAACTTACCCTTATCATACAATTTAAATACCAAGATTTTCTTACTTTTAGC ATGAGTCGTCATCCTGAAGTAAAATGGGCTGAGAGGGAAGACAAAGTGTACCTGACTGTGATGCTGCCTGATGCAAAAGACCCAAAAGTTAATCTGGACGCTGAAGGAACTTTTACCTTTGCTGCTTCTGGTGGGGCTGGCGATAATGCTTATGAACTGAAACTGGATCTCTTTGACAAGGTCGATGTAGAGGAAAGCAAAATTAGTTACAACGTCAGAAGCATATTTTGTGTTCTGGAGAAGGCAGAGAAGAAATGGTGGAATAGGCTTCTGCGTGGTGATGGTAAGGTTCCACATTACGTGAAGGTTGATTGGGACAAGTGGGTAGATGAAGATGAGGATGTTGGTAGTGCTGAACCTGGCGGTAATGGACCAGCAGACTTCGATCTTGGGGGAATGGACTTCTCGAAATTTGGAGATTTTGGTGGTGCTGGTGCTGGAGGCTTCCCTGGTGCTGGAGGCTTTCCCGGTGCTGGAGATTTTGGTGGTGCAGGTGGTGGTGATGAATTTGATGATAGTGATGATGATGAGCAAGAAGTGTCTAAACCAGAGGAAGGTGCTGGAGAGAAGCCGGTGGAAGCACCTACTGCAGAGAAGACTGAAGCTTAG MSRHPEVKWAEREDKVYLTVMLPDAKDPKVNLDAEGTFTFAASGGAGDNAYELKLDLFDKVDVEESKISYNVRSIFCVLEKAEKKWWNRLLRGDGKVPHYVKVDWDKWVDEDEDVGSAEPGGNGPADFDLGGMDFSKFGDFGGAGAGGFPGAGGFPGAGDFGGAGGGDEFDDSDDDEQEVSKPEEGAGEKPVEAPTAEKTEA Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo07955.1 vs. NCBI nr
Match: gi|902226919|gb|KNA20529.1| (hypothetical protein SOVF_051430 [Spinacia oleracea]) HSP 1 Score: 400.2 bits (1027), Expect = 2.100e-108 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1
BLAST of Spo07955.1 vs. NCBI nr
Match: gi|731346544|ref|XP_010684508.1| (PREDICTED: uncharacterized protein OsI_027940 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 288.1 bits (736), Expect = 1.200e-74 Identity = 157/211 (74.41%), Postives = 165/211 (78.20%), Query Frame = 1
BLAST of Spo07955.1 vs. NCBI nr
Match: gi|1009148510|ref|XP_015891976.1| (PREDICTED: uncharacterized protein OsI_027940 [Ziziphus jujuba]) HSP 1 Score: 237.7 bits (605), Expect = 1.800e-59 Identity = 125/190 (65.79%), Postives = 144/190 (75.79%), Query Frame = 1
BLAST of Spo07955.1 vs. NCBI nr
Match: gi|590718809|ref|XP_007050893.1| (HSP20-like chaperones superfamily protein isoform 1 [Theobroma cacao]) HSP 1 Score: 233.4 bits (594), Expect = 3.500e-58 Identity = 124/202 (61.39%), Postives = 147/202 (72.77%), Query Frame = 1
BLAST of Spo07955.1 vs. NCBI nr
Match: gi|823209762|ref|XP_012438048.1| (PREDICTED: uncharacterized protein OsI_027940 isoform X2 [Gossypium raimondii]) HSP 1 Score: 233.0 bits (593), Expect = 4.500e-58 Identity = 133/212 (62.74%), Postives = 154/212 (72.64%), Query Frame = 1
BLAST of Spo07955.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RNN1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_051430 PE=4 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 1.500e-108 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1
BLAST of Spo07955.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C1B9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g164660 PE=4 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 8.200e-75 Identity = 157/211 (74.41%), Postives = 165/211 (78.20%), Query Frame = 1
BLAST of Spo07955.1 vs. UniProtKB/TrEMBL
Match: A0A061DQP9_THECC (HSP20-like chaperones superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_004634 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 2.400e-58 Identity = 124/202 (61.39%), Postives = 147/202 (72.77%), Query Frame = 1
BLAST of Spo07955.1 vs. UniProtKB/TrEMBL
Match: A0A0D2RFC8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G146000 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 3.100e-58 Identity = 133/212 (62.74%), Postives = 154/212 (72.64%), Query Frame = 1
BLAST of Spo07955.1 vs. UniProtKB/TrEMBL
Match: A0A0A0K620_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396430 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 9.100e-58 Identity = 125/192 (65.10%), Postives = 146/192 (76.04%), Query Frame = 1
BLAST of Spo07955.1 vs. ExPASy Swiss-Prot
Match: Y8359_ORYSI (Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica GN=OsI_027940 PE=1 SV=2) HSP 1 Score: 206.8 bits (525), Expect = 2.200e-52 Identity = 120/217 (55.30%), Postives = 145/217 (66.82%), Query Frame = 1
BLAST of Spo07955.1 vs. ExPASy Swiss-Prot
Match: Y8359_ORYSJ (Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica GN=Os08g0359500 PE=2 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 4.800e-52 Identity = 120/220 (54.55%), Postives = 145/220 (65.91%), Query Frame = 1
BLAST of Spo07955.1 vs. ExPASy Swiss-Prot
Match: Y3377_ARATH (Uncharacterized protein At3g03773 OS=Arabidopsis thaliana GN=At3g03773 PE=1 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 4.100e-27 Identity = 58/117 (49.57%), Postives = 80/117 (68.38%), Query Frame = 1
BLAST of Spo07955.1 vs. ExPASy Swiss-Prot
Match: WOS2_SCHPO (Protein wos2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=wos2 PE=2 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.400e-21 Identity = 77/203 (37.93%), Postives = 108/203 (53.20%), Query Frame = 1
BLAST of Spo07955.1 vs. ExPASy Swiss-Prot
Match: DAF41_CAEEL (Co-chaperone protein daf-41 OS=Caenorhabditis elegans GN=daf-41 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.100e-14 Identity = 67/196 (34.18%), Postives = 94/196 (47.96%), Query Frame = 1
BLAST of Spo07955.1 vs. TAIR (Arabidopsis)
Match: AT4G02450.1 (HSP20-like chaperones superfamily protein) HSP 1 Score: 168.3 bits (425), Expect = 4.800e-42 Identity = 114/241 (47.30%), Postives = 141/241 (58.51%), Query Frame = 1
BLAST of Spo07955.1 vs. TAIR (Arabidopsis)
Match: AT3G03773.2 (HSP20-like chaperones superfamily protein) HSP 1 Score: 120.6 bits (301), Expect = 1.200e-27 Identity = 57/117 (48.72%), Postives = 79/117 (67.52%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07955.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07955.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07955.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo07955.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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