Spo07568.1 (mRNA)

Overview
NameSpo07568.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionSWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related
LocationSpoScf_02311 : 59350 .. 69250 (-)
Sequence length1982
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATATTTATACCTGGAGACAAAAGCGAACCATGAGAAACATTCTTGTGACCGGTCTAAGCCCACCTTGCAAGCATTTATAGAACGTGTATCACACGCGGTACTCCATAATATCTTCCTCCTATACAGGTCAGATCCAGAGTTTTACGTTCTAGGAGCTACAGGAAACGTATACATTGTTAACATAACGGCAACCCCTTCATGCACGTGCCCGGATCGTGCCACCCCATGCAAGCACATTCTATTCGTGCTTATCAGGGTTCTAGGGGTCCCACTTGACGACCCTAGCCTAAAGAGTCAAACCCTAAACCCTTGCCACCTAGAGAGGCTTCAAGCCACCTCTAGTTCTCCAAAATCTCTGGCAAGCCGGACTCTACGTCAGAGGTTCCATCAGATGTTCTTCTTGAAGAAGGAGTTAGGCATACAGGGGGCGAGTATAAAGCCGTGCATGGAAGCAGATGTTGGTGCCACGTGTCCTATCTGTCTTGAGACTGGGAGGTCGGGAGATAGAATGGTGGCATGTGAAACGTGTAAGATTCCTATCCACGAGGAGTGTTTGATGACCTGGAAAATGACTCAAAAGTGGAAAATATTAACAAAATGTGTAACTTGTAGGTCACAATGGAGACTTAAACGAGATCAAGATAGATATGTGAATCTATCTAATTATGTTAGTGAAGATGAACTTAAGATGAGCCCCCAAAAGGAAAGGAGTAAGGGTAAATGGGTAAATGGGTAAATGGGTAAATGTTTATCGTGATAAATTGTTGACCAAGTAGATCCATACATTTTATTTTTATTTCTTGGCTTGGCTTCTTGTCATGTCACAATACACTGTAAAGACACATACAATGTAAAGACATATACAATGTACAGAATTGTGTAAAATTAATTTCGATGTTTCCTCTTTAACTTTGTAAAAACAGTGTAGGTTGTATATCAATTGTTAATATTAGAGCTTGAAAAGAACACATACTAATATATATATTAAAAGATGTTTATAAAAGCGTTTATGTGTTACGTACAAAAGCATGTAGTAAGAATCGAACAACAAACCTTATGGATTAAAAATTTCGTTTCTTATCATTTTAGCTAGCTATAGTGTATGTTTTATTTTTCCCATTTAAATGTAAAATACAATCTTTTAAAAATGGGAACATTTTAACAAAAAGTAAACCCCACTAAAAGTAAAACCGGCCCGGAGCAACGCCCGAGCTACACACTAGTTTATTTATTATATACATGTGGTATACGTGGCGCATTATGCGATCAAGTTTGAATTATTTTTACTGAAATTAACTTATTCGAACTTATTTTTACTGGAAAATACCTAACTCTGTATTTTTATTTTTATTGAACTTTTCTGAAATTGTTTTTGCAAAAATAGATTATATCCTATCTTATCTTATCTTATCGTATATAATAATAAGAACTTACACCCCTAAATTTCAAATTTGAAACATCCAAAACTAGTTTTATTATAATTGATCATTGAACTATTCCACATAACACGATCAATTTCCATGTAAAGAAACAAAACAAAAAACCATTTTCTCTTACTCTCACAAACTAGGATTGGAAAACCGATTTCTTTGTCATAACCATAAAATTTGAATGCCATGAGCCCATGACCAGTGGCGGAACTAGCCTTGTGCATGGTGGGTCACAGGACCCACCATTCCTCGGGAAAAATTCGACAAATGTAATTAGCCTGCATAAAGTATCACATTTATTCTTCTGCTTCAGTGGTTTCTTACACAATTTCATTAACGTTAACTGTCCCAGCCGAGACCTGGGTTCGACTCTGCAGTGCTTGTTTTTTTTTTTTAACCTTCCTTATTCACTTCGTATGTCTTGGTCATTGGGTAGTTTGGTTTGATTGTAATATCAACATTGTACAGTTGTACCCCTTGTTTTTTCCTTCTCTATTTTATTTTTGTGCTCCAAAACCTTTAAAAAGTAAATAGGTTATGGTGAACTATGTTTTTCGTATTAAATTATATTATATATACCACGTGTTTAATATATTTAAACGAATGTATATGATTTTAGGTTACATTAATATGCTTCGGAATATTATTTTACACAAACTAAAATTGAGGGGGCGTCAAAATAGTGTATTGAATATGACCTATCAAGTTTTAAATCATGGGATTGACCGTATGACCGTAGGACTTGGATATGTATCACTTGGAAAGAGTATAGAAAGACATACCAATATACCATAATACCGATATTACAAGAAATATAAAGTGTAAAAATAAAAACCATGTATTATGTGAATTTTCTATGATGTTCACTCTATTTGTATGTTTATTTTTGTTTTTGTTTAATACGCGGTTTATTGTGACACACCATTCCTAAAATCCTGGATCCGCCACTACCCATGACATGCACTCATTTCCGACCACCACCTTGGTCTTATCACTTGAAATAGCCAATTACTTGCATTCAAGCACAACCCCAACGTTTGTCTAATTTTGTTAGCTTTGATGTTAACATAAGTTATTTGTTTAATAAGTTACATTTGTTGGTTTTGTTTCAAGGTTTTGTTGTATTTAGTTTATGGTTGTCTTCCATCTTCCATGCAAGCGCACAAGTGGTCCTACTCTTCTCTCAAATCCTTCCTTAAAATATATCTCCTCCGTTTCTTTTTGTTCTTTACATTTGCTATTTTGCAAGCGTTTTAACAACTAATTAATGTGCATTGAGATTCCTCTTTTTTTTAAAAAAAAAAAAAAAAAACTAAGACAAATTACGTTTATTTATAATGTTTTCACTTTTATCAAAATCCTGATATTGGGAAATGAGAAAATTCAAATATTTCAATGGAAAAGTGGGAGAGATTAAATGATCCAATGAATTTAATTGGTTAAAATAATCATTGGACACAAATTTTGATAAAATATTAAAACATTTATGTGATAATATAAAAGGAAATGTAAAATATATTTTAGGACATCCAAAAAGAAAAACGTAAAAAACAAAAAGAGATGGACAAAGTTATATTTCTTTTAAACATTTTGAATTATCTCTAATGGAGTAGGGTGGAACGTATGAGTTATTTCCAGTTTGCATGCCACCAACGCCCTCTGAAGTCTAAACTAATGTACCACTTTTTCTTTTACTAAATAGTTTGTTGTGCTCTATGTTTTTTTTTTTTTATTATTATTATTTGAATTAGGACCCTGTAGAAATTACAACAAATTTAGAGCTTGAGTTTCTGGGTCCTAATTCAAATAAAAAAAAATTACAGTAAAATCTTATTCATATCATTTTTCTCCACTTATTCATATGAAGCAGTAAAAATTACAGTATTATTCTTAAAATGCTTGATCTTGCTCACGAGCTTTCGAACCGAGCTTAGGATAGCTCAGGATCGGCTTGTTAAGATCTCGAGTCGAACTCGAGCTCGAATCGAGCCCGCTCAAGCCGAGGTTTGAACAAGCTTTAGCGAGCCGAGCATCAAATAGTTCAAGAGCAGGCTTGGCTCATTAACACCCCTAGAAGGGAGTGCTTCACGTCTTCAATATAAGCAAACAACAAGATATCGAATCAAGCAAGGAGGATTTTTTTATGTTTATGTTTTATATGAACTCTAATTGTTTTTTTTTTCTATGTTTCTTTCTTTTGTTCACTTTTATTAAGAATAATACTACGTACTTCTTAATCTTGATTCAATCTTCCAGATTCTTTAATACATACTACTATTATCTGATAAAAACTTTACTACGTGGCGATCCACGTGAAAAAAAGTTGGACGTGAGTTTTCGACGGTAGTTTTCCTTCAATATTGCATGGTTATTGTGTGCCTCTTGCATACTAGACATATGAAATGGAAAGGTTTCCATTATTGGGAGGATTTTCATGAGATGCTTATATTCAACTTGAAAACATAAGGATTTGGCTACGATATCTAATGATTATGGAGAACATGATTTATCTTTGAACTACTATGTATAACTTTACCTTAGATATGTTTATTTGATCTTTTATCATGTCATGTTTAGTGACTCGATGAAATATGCTTAGTATATATGTGTCAAATGAGACGGTTAGGTTATTCTTAAGTTGGGTTATCATTTTCATGTTTATTCACTTCTTTCTCTATTGTGTGCATGTTATGATTTTTAACAATAGCTCAACTTAGATAGTAATTGTTTGACTTGTGATAATTTTAGTACTCAACTTGAAGTATGAAACACTTATCAAATTGCTTATGGTAATCTTGTATGGCCTTTTTCATTGATTTAGGGTTCCAATAATTAAATGGTTAAGGGTATGAAGATTTGACATTTGCTATCTTGCGGAGATTCAAATGCTCACACCAACTAGTACTAAAAGGTATTTTTATTGGTGCCACTTGATATTGTACGTGCGAATATCTAATATATACCCATGTATAATTTATTTTGACACATTTTGGTGGCATTTTGTATTTGGGCTTTTCTTCGGTTATTTATTTAATGTCAATGCGTACCATTATTTTAATTAACACTACTGCACTAGGATATGACTCTCAATATATGACAAGGCTCTCATTTATATTCATCTTTGCAACCTTTTCTCATTTTTAAGAATTTGTAGATTTCAACAATGATAAATTGATAGGGGATTTATACACCTATTACAAGAATTTATAAACACCATTCTCCGATAAGGACACATTTTTTTTACATGAAGAGTTAGTAAGTAAAATAAAAAATAAATATCAAACCACTAGCAAAAAATACTCCACGAATTAAACATAGTTACTTTTAATAGATGCAAAATGTTATTATTAATCCTTCCCTTTTCTACAAGACTAAGTTAATTACGGAGTAACAATCTTTATTTTATATATCCCGTGCCAATGTGCGGGCATGAGCTCTGCCAGCCAATCTCCATGATGGGCAAGCAAAACATATTAAGGGGTATTTTCGTAAATAAATTATCAAAATATACAATCCACATATTTAAATGTACAATCTCTTTTTATATTAAAATTATTTTCTTTTATTTTTAGTTTTTAAAAGTATCATATTATCAATTAGATTGTACATTGCAATTAGATTGTATATTGTTCACCATTTTTTTTAACTTTTTTTTTGAGGGGATATATTGTTCATTATAATTACGAGAATGCTACTGAATATGCCAATTAAGCAGATTAATTTGAAATTTCTCCATCTACATACACAAGTTAAAATAAGTTTAAATGTACATAAAAAAAATACAAAATTCCGATCCTAATATAACATATAGTTCACCCGGGTGCACAATGCTCACTGTGCACCCTGTTTTACAAAGAACATATAGTTCAAATACAAAGAACATATTGTTCATACCCAAAGAACATATAGCCAATGAACATATAGTTCAAATTCATAGAACATATAGTTTAAATATTTCACTAGTACATGTACATTGAAATCGTTCTCATTGTTCATTAGATTTTCAATAAATGTTCAACGGGGTGCACAATGAGCAATTGAGCACTGTGCAACCGGGTGTATAATCCAAATTGCGAGAGCCTCGTTAATATAACTTGGACGCGCCAAATTTAGAAGCTTTTAATGGAAAAGGGAATTGGGGAAGAAAAGGGTTTGGGTTGGCGCAGAGGTGCTCATCGTCTAAGGCCCTATTTGGTTCGATATTAGTAAAGGAAGGGAAGAGAAGAGAAAGGAAGGGAAGAGAAAGGAAGAGAAAGGAAAGGAAAGGAAATAAAATATATTTTCCCATGTTTGGTACGATGAAAGAAAATGATAGGAATCTCATGTTTGGTACAACATTAGTAAAGGAAGAGAAGGGAAGGAAAGAAAAAAACGTGTGTTTAAGCTTTAATATTTTGTTTGACAGATTTAATTTTTTCTTTTCTTCCAAATTCCTCCAATTTTGAGATAAAAGGAAAGTGAAACTTTTATACAGTGAGCTTTCCTTCCAATTCCCTTCATTTCCTTTCACTTCCCATATAATTTTTTGAACCAAATATAAGAAACATTATTTTTCCTTCCCTTTCTTTTCTTTTCCTTCCAATTCCTCCCAACCAAATAAAGCCTAACTCGAATAAATGCACATGAATTCGACACCGGAAATAAATCCAGGTACAGTTTTTATCATCATTCTGCCTTTTGATTTCGATTCCAATTTCACAACTAGGTTTGGTATTGTAGATGTCGAGTTGCAATTTCTAATCAATTGGAATTGCAGAACTTGATTTTTGTGGATTCATACATTTAATTTTTTTGTTTTTAGACCTATACTTGATGTGCGGAAAAGGAAGGCGGTTCGATTGAGCAAAGATGTCGACTCCAAACGTCGCGAAAATAACAATGGGTGAATTTTTCTATTAAGCACCTTAATTTATGCATCATTTCAGGGTTTTCTTTTTGGTTTTTGTTGCGAATTTGAACATCGTTAACAGGGTTTTTCCATTAAGTAATGATAAAGTGTGAGCTACTGTATAATTGAGTTGGTTGTGCTTGTGAATTTGTTTGTTTTGATTGGATTTATTGAATTTATTGAATTTAAAGCCTTTTATGTGGGGGGATTGGCAAATGAACCATGGATCAGCTTTTAATTGGGGATTCAGTTCATAGATTCGATTGTGTGGGTTGGTTAATAGATGATCTCATTTTCATGTGTTATTTTTCCTGTGCTAAGAAACTCCTTAGTGTAGGGCAAAGATAATTACATGTTGCAACCAGTTACTGTGTAGAAAAGCAAGGAATTCTGGAAATCAAATATATACAAATTTTTTGTAATTGGTTTCATTAGATAATTGTTCTGCATTCTAATGCCAATATTTTCCTCCATTTATGTGATATTTTTGTTTATTTGGTAGTCTGTGTATCATGAATGTAATCATTGTTATTATAATACGACTAGTAATTTGATTTCTTCCACAAGTATATTTGGTGTGGTCTTATTAGATGTGGGATTGGAAACATGAGTCTGTTTTTAGTTGGGGATACTGATCACCCCATATTCAATTCATTGTATTCTTACAAGTAGTTTACGAGCTAGATGATTGAGGGCTGAAAGTATGCAAGTCATACACCGTAATACAATACCTTTTTCCATATCCAGTAGACACGTTTTTCTGATCATTGTGTTCTTGAGTCTTGACCACTTGATTGAGTTGGCTGTCTTATGAAGATAGGGTAAGCTACTAAGCAAGGTTTTCAAGCCTTTATTTATGAACATAGGCCAAGTAAAGTTTTTATGAACCGAATAAGGATTAAGATTAAGGAAGGTACACACGTACGTACACCTGGCTAATTGGCTATATACTCTTACTAGTAGCTTTATCTTGTTTTTTAATTGCTCTTGCTTACTAGCTCCTCGTTACTCTTTATGTGCACTCTACTGATTGAGCTTTAGTATGGGAGTAAATTTATATACTGACATATTTGGTTATAATTTTGTTTAGTGTCATTTTGTCTGACTTTGACGACAAAGATATTGACGTGGGATCTGAAGCCGTTAAGGAGAAATATTCAACCGTAGCTTTAAATGAACTTGGAAACAGAGAATTTGAGCTTCTGGAGGCTGGCCCTCTCGCCGTAGGATATCTTTCTACAGGCGACCGTATCTTGCATTTGAACTTCAAGGTTAAGGAAAAGGGCGTATCCGGTGTGCAGACCTTTTTTTCTGAGCTGATAGAAACTAAAAAAAGTACTCTGCATGGGGACAAGTGACATACTACCAGGTTATACACTCTTTGAACCCATGTATACTTGATTACTTGATCTCATTGTTCTACTCTCTTGGTGTGGATGACTTTGTTTACTATGTAGTAGAAAATTTCTGCACTATCATTACCATTAGATGATCCTTTTTGCCATTTCGGTTACACTTGTTGCAGAGAAAGCTGATACTCACGGTTGCCTCTATTGTTGTTCTCGCGATATTCACCATCCTGCTGACATCTGTAGCTTCCGAAGTGGCGGGGAACCTCATTTTGATACCTTGTGTTCCAAACTCAAGGAGTTCAATAAGTACTTGGAGAAGGGTATACTGAGGTGGTTGTTTTCTTTATTGTTAACCAATTCTTTGGTATTACTGTACTAATTATCTTGCATTTTTTTTACTGATCTTCCTTACTAGCTTCATATAGCTCTATCATTTGTGTTCTGAATGTTATATTATGGTTGTCCATAATCTGACTTGATTTAGTCAAACAGTTAGATACGGATAGGATTATCTTAGTTGAAATTCACTACTCAACTAGTCTACAAGGAAGTGGATATAAACTATTTTTAAGCTAATTATTTTGTGAAATGTTATTGGCATGAATATGTCCTGATTGAATGTCGTTTTTTCAATTGCTAAAAAGAAAACGCAAAGACAAAGAAGACCTCTCTCTTAGGTTCCCGGATCTCGGACTCGAGTACAGGGGCAACAACACTTGTACGGACATGATAGCTAGAAATGCATCTGTAGCCTTGCGCTTGTTCAATGGAGAGAAGGTGTGGTTTTCTTCTCCTGAAAATAGTTCAGTTCCCATTTGTTGTATTGCCTTGTTTTTTCGTGGGTCCACGTAATTATATTATTATATTATTAATATATACCTGGCTTATGAATGAACTTTTCAGGGTTCAAACTTTGAGCTTGTGAAGATTGGCCGGTTTGAAATAGTAGTGTTGGGGTTTGGGTTCCTCCAGCATATGAACTTTGAGGCAAAGAACAAAGACGATCCTGATGCTGAGGTGATGACTTTTTTTGCGGAAGTGATCAGAAGGGCCAGATATTTCTTCGTTGACTTTTGCCAATGCTTGGGCCCATCTTTTCTCCTACCAGGTATATATATATATATATACTTGAGTGGATGGTTATGTCATTAATATCTCGACTGTAATCTTATAGTACATGATTGATTATCTTTCAGATGAAGCTGAACTTAAAGGTTGCTGTTACTGTAAATGTATTCATCATCCTCCTGGTCCCGGGTACCTCATTGGCCGGGAATTAGACTGATGAAACATTAGCTGGGTGTTGTAGGTCACAATGGAGACTGAAACGAGATCAAGATAGATATGTGAATCTATCTAATTATGTCAGTGAAGATGAAACATTAGCTGGGTTTTGTGTATGTGGTTGACTTGTGAGCTATGAGTATTGTGTCTGTTTGCCGTTTCTTTAATATTGTTTTGATGACAGAGTTAATGTTTACGTAAGATGGTAAAGGTAATACTATCACTTGATTATTTATGCTCTTCTAGTCTTCTTTGTCCCATATTGTGAGATCCAACCTCATTGTAACTTTGTGTAGTTATCTTTATACTTGGTAATACAGGAACATTCACTGCAGTTTCCTTGTTGCTTGCTTTGAAGGTTTACAGCAACTGTCAACCTTTGTGTTGTTCATAATATACTCCCTGTAAATATGGCGATGATGGTAACACATCATGCTTCATTGAAGGTGAAGGTTCTTGATAATTTCCTGAATCGTTCATTATTCTTCTGATTTTCACCTGCTGATTTAATTATAATTTATTTCGCCGTTTTTTTAGTTATTAATTAAGCAGTTTAATGTTGTTATAGTTTGATCATGTTGAGTATATTTGACTATGTCAGGAATAAAATAGTGGTATCATACAACTGCAGGTGGAGAAGTGATGGTTTCCCGCTTCTGGAAGAAAAAGAAAACATTTCCAGTACTTCAATATATCTTCTACTTGGATAGATGTTTTATTTATTTTATTTTCGGATTTATTTTATTTTATTTTATTTTAGTTTATGTTTTATTTTATGTTTTATTTTGTTGTTCCTGGTGAGAAAGGTGATTCAAAATATTGTGTAAAGAGCTGTTACCGCGTTTAAAGTTGGCAAATGGAACTGATTATGAAGGAGTTGTTCCTTAAGAGAAATGTTTTGCATTGGATTGTAACTTGCATGACAATTGACAAGTGGAAAAC

mRNA sequence

ATGCCATATTTATACCTGGAGACAAAAGCGAACCATGAGAAACATTCTTGTGACCGGTCTAAGCCCACCTTGCAAGCATTTATAGAACGTGTATCACACGCGGTACTCCATAATATCTTCCTCCTATACAGGTCAGATCCAGAGTTTTACGTTCTAGGAGCTACAGGAAACGTATACATTGTTAACATAACGGCAACCCCTTCATGCACGTGCCCGGATCGTGCCACCCCATGCAAGCACATTCTATTCGTGCTTATCAGGGTTCTAGGGGTCCCACTTGACGACCCTAGCCTAAAGAGTCAAACCCTAAACCCTTGCCACCTAGAGAGGCTTCAAGCCACCTCTAGTTCTCCAAAATCTCTGGCAAGCCGGACTCTACGTCAGAGGTTCCATCAGATGTTCTTCTTGAAGAAGGAGTTAGGCATACAGGGGGCGAGTATAAAGCCGTGCATGGAAGCAGATGTTGGTGCCACGTGTCCTATCTGTCTTGAGACTGGGAGGTCGGGAGATAGAATGGTGGCATGTGAAACGTGTAAGATTCCTATCCACGAGGAGTGTTTGATGACCTGGAAAATGACTCAAAAGTGGAAAATATTAACAAAATGTGTAACTTGTAGGTCACAATGGAGACTTAAACGAGATCAAGATAGATATGTGAATCTATCTAATTATGTTAGTGAAGATGAACTTAAGATGAGCCCCCAAAAGGAAAGGAGTAAGGGTAAATGGGTAAATGGACCTATACTTGATGTGCGGAAAAGGAAGGCGGTTCGATTGAGCAAAGATGTCGACTCCAAACGTCGCGAAAATAACAATGGTGTCATTTTGTCTGACTTTGACGACAAAGATATTGACGTGGGATCTGAAGCCGTTAAGGAGAAATATTCAACCGTAGCTTTAAATGAACTTGGAAACAGAGAATTTGAGCTTCTGGAGGCTGGCCCTCTCGCCAAACTAAAAAAAGTACTCTGCATGGGGACAAGTGACATACTACCAGAGAAAGCTGATACTCACGGTTGCCTCTATTGTTGTTCTCGCGATATTCACCATCCTGCTGACATCTGTAGCTTCCGAAGTGGCGGGGAACCTCATTTTGATACCTTGTGTTCCAAACTCAAGGAGTTCAATAAGTACTTGGAGAAGGGTATACTGAGAAAACGCAAAGACAAAGAAGACCTCTCTCTTAGGTTCCCGGATCTCGGACTCGAGTACAGGGGCAACAACACTTGTACGGACATGATAGCTAGAAATGCATCTGTAGCCTTGCGCTTGTTCAATGGAGAGAAGGGTTCAAACTTTGAGCTTGTGAAGATTGGCCGGTTTGAAATAGTAGTGTTGGGGTTTGGGTTCCTCCAGCATATGAACTTTGAGGCAAAGAACAAAGACGATCCTGATGCTGAGGTGATGACTTTTTTTGCGGAAGTGATCAGAAGGGCCAGATATTTCTTCGTTGACTTTTGCCAATGCTTGGGCCCATCTTTTCTCCTACCAGATGAAGCTGAACTTAAAGGTTGCTGTTACTGTAAATGTATTCATCATCCTCCTGGTCCCGGGTTTACAGCAACTGTCAACCTTTGTGTTGTTCATAATATACTCCCTGTAAATATGGCGATGATGGTAACACATCATGCTTCATTGAAGGAATAAAATAGTGGTATCATACAACTGCAGGTGGAGAAGTGATGGTTTCCCGCTTCTGGAAGAAAAAGAAAACATTTCCAGTACTTCAATATATCTTCTACTTGGATAGATGTTTTATTTATTTTATTTTCGGATTTATTTTATTTTATTTTATTTTAGTTTATGTTTTATTTTATGTTTTATTTTGTTGTTCCTGGTGAGAAAGGTGATTCAAAATATTGTGTAAAGAGCTGTTACCGCGTTTAAAGTTGGCAAATGGAACTGATTATGAAGGAGTTGTTCCTTAAGAGAAATGTTTTGCATTGGATTGTAACTTGCATGACAATTGACAAGTGGAAAAC

Coding sequence (CDS)

ATGCCATATTTATACCTGGAGACAAAAGCGAACCATGAGAAACATTCTTGTGACCGGTCTAAGCCCACCTTGCAAGCATTTATAGAACGTGTATCACACGCGGTACTCCATAATATCTTCCTCCTATACAGGTCAGATCCAGAGTTTTACGTTCTAGGAGCTACAGGAAACGTATACATTGTTAACATAACGGCAACCCCTTCATGCACGTGCCCGGATCGTGCCACCCCATGCAAGCACATTCTATTCGTGCTTATCAGGGTTCTAGGGGTCCCACTTGACGACCCTAGCCTAAAGAGTCAAACCCTAAACCCTTGCCACCTAGAGAGGCTTCAAGCCACCTCTAGTTCTCCAAAATCTCTGGCAAGCCGGACTCTACGTCAGAGGTTCCATCAGATGTTCTTCTTGAAGAAGGAGTTAGGCATACAGGGGGCGAGTATAAAGCCGTGCATGGAAGCAGATGTTGGTGCCACGTGTCCTATCTGTCTTGAGACTGGGAGGTCGGGAGATAGAATGGTGGCATGTGAAACGTGTAAGATTCCTATCCACGAGGAGTGTTTGATGACCTGGAAAATGACTCAAAAGTGGAAAATATTAACAAAATGTGTAACTTGTAGGTCACAATGGAGACTTAAACGAGATCAAGATAGATATGTGAATCTATCTAATTATGTTAGTGAAGATGAACTTAAGATGAGCCCCCAAAAGGAAAGGAGTAAGGGTAAATGGGTAAATGGACCTATACTTGATGTGCGGAAAAGGAAGGCGGTTCGATTGAGCAAAGATGTCGACTCCAAACGTCGCGAAAATAACAATGGTGTCATTTTGTCTGACTTTGACGACAAAGATATTGACGTGGGATCTGAAGCCGTTAAGGAGAAATATTCAACCGTAGCTTTAAATGAACTTGGAAACAGAGAATTTGAGCTTCTGGAGGCTGGCCCTCTCGCCAAACTAAAAAAAGTACTCTGCATGGGGACAAGTGACATACTACCAGAGAAAGCTGATACTCACGGTTGCCTCTATTGTTGTTCTCGCGATATTCACCATCCTGCTGACATCTGTAGCTTCCGAAGTGGCGGGGAACCTCATTTTGATACCTTGTGTTCCAAACTCAAGGAGTTCAATAAGTACTTGGAGAAGGGTATACTGAGAAAACGCAAAGACAAAGAAGACCTCTCTCTTAGGTTCCCGGATCTCGGACTCGAGTACAGGGGCAACAACACTTGTACGGACATGATAGCTAGAAATGCATCTGTAGCCTTGCGCTTGTTCAATGGAGAGAAGGGTTCAAACTTTGAGCTTGTGAAGATTGGCCGGTTTGAAATAGTAGTGTTGGGGTTTGGGTTCCTCCAGCATATGAACTTTGAGGCAAAGAACAAAGACGATCCTGATGCTGAGGTGATGACTTTTTTTGCGGAAGTGATCAGAAGGGCCAGATATTTCTTCGTTGACTTTTGCCAATGCTTGGGCCCATCTTTTCTCCTACCAGATGAAGCTGAACTTAAAGGTTGCTGTTACTGTAAATGTATTCATCATCCTCCTGGTCCCGGGTTTACAGCAACTGTCAACCTTTGTGTTGTTCATAATATACTCCCTGTAAATATGGCGATGATGGTAACACATCATGCTTCATTGAAGGAATAA

Protein sequence

MPYLYLETKANHEKHSCDRSKPTLQAFIERVSHAVLHNIFLLYRSDPEFYVLGATGNVYIVNITATPSCTCPDRATPCKHILFVLIRVLGVPLDDPSLKSQTLNPCHLERLQATSSSPKSLASRTLRQRFHQMFFLKKELGIQGASIKPCMEADVGATCPICLETGRSGDRMVACETCKIPIHEECLMTWKMTQKWKILTKCVTCRSQWRLKRDQDRYVNLSNYVSEDELKMSPQKERSKGKWVNGPILDVRKRKAVRLSKDVDSKRRENNNGVILSDFDDKDIDVGSEAVKEKYSTVALNELGNREFELLEAGPLAKLKKVLCMGTSDILPEKADTHGCLYCCSRDIHHPADICSFRSGGEPHFDTLCSKLKEFNKYLEKGILRKRKDKEDLSLRFPDLGLEYRGNNTCTDMIARNASVALRLFNGEKGSNFELVKIGRFEIVVLGFGFLQHMNFEAKNKDDPDAEVMTFFAEVIRRARYFFVDFCQCLGPSFLLPDEAELKGCCYCKCIHHPPGPGFTATVNLCVVHNILPVNMAMMVTHHASLKE
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo07568Spo07568gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo07568.1Spo07568.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo07568.1.CDS.10Spo07568.1.CDS.10CDS
Spo07568.1.CDS.9Spo07568.1.CDS.9CDS
Spo07568.1.CDS.8Spo07568.1.CDS.8CDS
Spo07568.1.CDS.7Spo07568.1.CDS.7CDS
Spo07568.1.CDS.6Spo07568.1.CDS.6CDS
Spo07568.1.CDS.5Spo07568.1.CDS.5CDS
Spo07568.1.CDS.4Spo07568.1.CDS.4CDS
Spo07568.1.CDS.3Spo07568.1.CDS.3CDS
Spo07568.1.CDS.2Spo07568.1.CDS.2CDS
Spo07568.1.CDS.1Spo07568.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo07568.1.utr3p.1Spo07568.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo07568.1.exon.10Spo07568.1.exon.10exon
Spo07568.1.exon.9Spo07568.1.exon.9exon
Spo07568.1.exon.8Spo07568.1.exon.8exon
Spo07568.1.exon.7Spo07568.1.exon.7exon
Spo07568.1.exon.6Spo07568.1.exon.6exon
Spo07568.1.exon.5Spo07568.1.exon.5exon
Spo07568.1.exon.4Spo07568.1.exon.4exon
Spo07568.1.exon.3Spo07568.1.exon.3exon
Spo07568.1.exon.2Spo07568.1.exon.2exon
Spo07568.1.exon.1Spo07568.1.exon.1exon


Homology
[Close]
BLAST of Spo07568.1 vs. NCBI nr
Match: gi|902204739|gb|KNA14962.1| (hypothetical protein SOVF_102600 [Spinacia oleracea])

HSP 1 Score: 423.3 bits (1087), Expect = 6.400e-115
Identity = 194/195 (99.49%), Postives = 195/195 (100.00%), Query Frame = 1 

		  

Query: 325 MGTSDILPEKADTHGCLYCCSRDIHHPADICSFRSGGEPHFDTLCSKLKEFNKYLEKGIL 384
           MGTSDILPEKADTHGCLYCCSRDIHHPADICSFRSGGEPHFDTLCSKLKEFNKYLEKGIL
Sbjct: 1   MGTSDILPEKADTHGCLYCCSRDIHHPADICSFRSGGEPHFDTLCSKLKEFNKYLEKGIL 60

Query: 385 RKRKDKEDLSLRFPDLGLEYRGNNTCTDMIARNASVALRLFNGEKGSNFELVKIGRFEIV 444
           RKRKDKEDLSLRFPDLGLEYRGNNTCTDMIARNASVALRLFNGEKGSNFELVKIGRFEIV
Sbjct: 61  RKRKDKEDLSLRFPDLGLEYRGNNTCTDMIARNASVALRLFNGEKGSNFELVKIGRFEIV 120

Query: 445 VLGFGFLQHMNFEAKNKDDPDAEVMTFFAEVIRRARYFFVDFCQCLGPSFLLPDEAELKG 504
           VLGFGFLQHMNFEAKNKDDPDAEVMTFFAEVIRRARYFFVDFCQCLGPSFLLPDEAELKG
Sbjct: 121 VLGFGFLQHMNFEAKNKDDPDAEVMTFFAEVIRRARYFFVDFCQCLGPSFLLPDEAELKG 180

Query: 505 CCYCKCIHHPPGPGF 520
           CCYCKCIHHPPGPG+
Sbjct: 181 CCYCKCIHHPPGPGY 195
[Close]
BLAST of Spo07568.1 vs. NCBI nr
Match: gi|731336483|ref|XP_010679282.1| (PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 325.9 bits (834), Expect = 1.400e-85
Identity = 161/232 (69.40%), Postives = 190/232 (81.90%), Query Frame = 1 

		  

Query: 11  NHEKHSCDR-------SKPTLQAFIERVSHAVLHNIFLLYRSDPEFYVLGATGNVYIVNI 70
           NH+ H  D+       +KPT +AF ER +HA+LHN+ LLYRSDP  YVLG+TGNVYIVNI
Sbjct: 13  NHQHHHHDKQPNNIRSTKPTKEAFAERTTHALLHNLLLLYRSDPHLYVLGSTGNVYIVNI 72

Query: 71  TATPSCTCPDRATPCKHILFVLIRVLGVPLDDPSLKSQTLNPCHLERLQATSSSPKSLAS 130
           + TP+CTCPDRATPCKHILFVLI+VLGVPLDDPSL+ Q L P  +ERLQ T SSPKSLAS
Sbjct: 73  STTPTCTCPDRATPCKHILFVLIKVLGVPLDDPSLRKQALKPRQIERLQGTPSSPKSLAS 132

Query: 131 RTLRQRFHQMFFLKKELGIQGA-SIKPCMEADVGATCPICL-ETGRSGDRMVACETCKIP 190
           +TLRQRFHQ+FFLK ELGI+GA ++KPCM  + GATCPICL E  RSG+R+VACETCKIP
Sbjct: 133 QTLRQRFHQVFFLKNELGIRGAINLKPCMGVEAGATCPICLEEMRRSGERIVACETCKIP 192

Query: 191 IHEECLMTWKMTQKWKILTKCVTCRSQWRLK-RDQDRYVNLSNYVSEDELKM 233
           IHEECLMTWK  Q+ K LTKCVTCRSQWR K  + +RY+NL++YV EDE+ +
Sbjct: 193 IHEECLMTWKRAQE-KGLTKCVTCRSQWRGKLGNHERYLNLADYVIEDEMSL 243
[Close]
BLAST of Spo07568.1 vs. NCBI nr
Match: gi|870867150|gb|KMT18049.1| (hypothetical protein BVRB_2g032410 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 261.9 bits (668), Expect = 2.500e-66
Identity = 129/219 (58.90%), Postives = 167/219 (76.26%), Query Frame = 1 

		  

Query: 11  NHEKHSCDRSKPTLQAFIERVSHAVLHNIFLLYRSDPEFYVLGATGNVYIVNITATPSCT 70
           +HE+ S  R  PT QA  +R+  A+ H +FLL+RSDP FY+LGATGNVYIVN++ TP+CT
Sbjct: 18  HHERMSTTRFHPT-QALTDRILRALGHRLFLLHRSDPNFYILGATGNVYIVNVSTTPACT 77

Query: 71  CPDRATPCKHILFVLIRVLGVPLDDPSLKSQTLNPCHLERLQATSSSPKSLASRTLRQRF 130
           CPDRATPCKHILFVLI+VLGVPLDDP L+ +TL P  L RL A  SS  SLA  +LR+RF
Sbjct: 78  CPDRATPCKHILFVLIKVLGVPLDDPCLRKRTLRPNQLTRLLANPSSIYSLAGPSLRERF 137

Query: 131 HQMFFLKKELGIQGASIKPCMEADVGATCPICL-ETGRSGDRMVACETCKIPIHEECLMT 190
           HQ FFL++ELG  GA+  P    + GA CPICL E G++G+R+VAC TC+  +HE+CLMT
Sbjct: 138 HQAFFLQRELG--GAAHTPRPTIEEGAVCPICLEEMGKTGERLVACGTCRNSLHEQCLMT 197

Query: 191 WKMTQKWKILTKCVTCRSQWRLKRDQDRYVNLSNYVSED 229
           WK TQ+ +  + CV CRS+W+ + +Q++Y+NL+ YVSED
Sbjct: 198 WKRTQRRRSFS-CVICRSRWKDRANQEKYLNLAAYVSED 232
[Close]
BLAST of Spo07568.1 vs. NCBI nr
Match: gi|731317307|ref|XP_010668457.1| (PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 261.9 bits (668), Expect = 2.500e-66
Identity = 129/219 (58.90%), Postives = 167/219 (76.26%), Query Frame = 1 

		  

Query: 11  NHEKHSCDRSKPTLQAFIERVSHAVLHNIFLLYRSDPEFYVLGATGNVYIVNITATPSCT 70
           +HE+ S  R  PT QA  +R+  A+ H +FLL+RSDP FY+LGATGNVYIVN++ TP+CT
Sbjct: 73  HHERMSTTRFHPT-QALTDRILRALGHRLFLLHRSDPNFYILGATGNVYIVNVSTTPACT 132

Query: 71  CPDRATPCKHILFVLIRVLGVPLDDPSLKSQTLNPCHLERLQATSSSPKSLASRTLRQRF 130
           CPDRATPCKHILFVLI+VLGVPLDDP L+ +TL P  L RL A  SS  SLA  +LR+RF
Sbjct: 133 CPDRATPCKHILFVLIKVLGVPLDDPCLRKRTLRPNQLTRLLANPSSIYSLAGPSLRERF 192

Query: 131 HQMFFLKKELGIQGASIKPCMEADVGATCPICL-ETGRSGDRMVACETCKIPIHEECLMT 190
           HQ FFL++ELG  GA+  P    + GA CPICL E G++G+R+VAC TC+  +HE+CLMT
Sbjct: 193 HQAFFLQRELG--GAAHTPRPTIEEGAVCPICLEEMGKTGERLVACGTCRNSLHEQCLMT 252

Query: 191 WKMTQKWKILTKCVTCRSQWRLKRDQDRYVNLSNYVSED 229
           WK TQ+ +  + CV CRS+W+ + +Q++Y+NL+ YVSED
Sbjct: 253 WKRTQRRRSFS-CVICRSRWKDRANQEKYLNLAAYVSED 287
[Close]
BLAST of Spo07568.1 vs. NCBI nr
Match: gi|593324262|ref|XP_007137226.1| (hypothetical protein PHAVU_009G110100g [Phaseolus vulgaris])

HSP 1 Score: 236.1 bits (601), Expect = 1.400e-58
Identity = 114/220 (51.82%), Postives = 151/220 (68.64%), Query Frame = 1 

		  

Query: 11  NHEKHSCDRSKPTLQAFIERVSHAVLHNIFLLYRSDPEFYVLGATGNVYIVNITATPSCT 70
           +H  H   R KP+ Q   +R+  A+ H + LL+R+   F++ GATGNVY V +++TPSCT
Sbjct: 24  HHHHHHHPRFKPS-QPISDRIVRALRHRLRLLHRAGSTFFIFGATGNVYTVTLSSTPSCT 83

Query: 71  CPDRATPCKHILFVLIRVLGVPLDDPSLKSQTLNPCHLERLQATSSSPKSLASRTLRQRF 130
           CPDR TPCKHILFV IRVLGV LDD  L+ +TL PC +ERL  T + P+++A  TLRQRF
Sbjct: 84  CPDRTTPCKHILFVFIRVLGVSLDDVCLRRRTLRPCQIERLLGTPTLPEAVAGGTLRQRF 143

Query: 131 HQMFFLKKELGIQGASIKPCMEADVGATCPICLETGRSGDRMVACETCKIPIHEECLMTW 190
           HQ+FF        G S +P +E + GATCP+CLE       +VAC TC+ PIHEECLM W
Sbjct: 144 HQLFF-------GGGSTRPKIETEEGATCPVCLEEMGKEQNLVACGTCRNPIHEECLMRW 203

Query: 191 KMTQKWKILTKCVTCRSQWRLKRDQDRYVNLSNYVSEDEL 231
           K T + +    CV CR++WR + +QD+Y+NLS YVSED++
Sbjct: 204 KRT-RGRRTASCVICRARWRDRVEQDKYLNLSAYVSEDDM 234
[Close]
BLAST of Spo07568.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R848_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_102600 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 4.400e-115
Identity = 194/195 (99.49%), Postives = 195/195 (100.00%), Query Frame = 1 

		  

Query: 325 MGTSDILPEKADTHGCLYCCSRDIHHPADICSFRSGGEPHFDTLCSKLKEFNKYLEKGIL 384
           MGTSDILPEKADTHGCLYCCSRDIHHPADICSFRSGGEPHFDTLCSKLKEFNKYLEKGIL
Sbjct: 1   MGTSDILPEKADTHGCLYCCSRDIHHPADICSFRSGGEPHFDTLCSKLKEFNKYLEKGIL 60

Query: 385 RKRKDKEDLSLRFPDLGLEYRGNNTCTDMIARNASVALRLFNGEKGSNFELVKIGRFEIV 444
           RKRKDKEDLSLRFPDLGLEYRGNNTCTDMIARNASVALRLFNGEKGSNFELVKIGRFEIV
Sbjct: 61  RKRKDKEDLSLRFPDLGLEYRGNNTCTDMIARNASVALRLFNGEKGSNFELVKIGRFEIV 120

Query: 445 VLGFGFLQHMNFEAKNKDDPDAEVMTFFAEVIRRARYFFVDFCQCLGPSFLLPDEAELKG 504
           VLGFGFLQHMNFEAKNKDDPDAEVMTFFAEVIRRARYFFVDFCQCLGPSFLLPDEAELKG
Sbjct: 121 VLGFGFLQHMNFEAKNKDDPDAEVMTFFAEVIRRARYFFVDFCQCLGPSFLLPDEAELKG 180

Query: 505 CCYCKCIHHPPGPGF 520
           CCYCKCIHHPPGPG+
Sbjct: 181 CCYCKCIHHPPGPGY 195
[Close]
BLAST of Spo07568.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F3D5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g120090 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 9.700e-86
Identity = 161/232 (69.40%), Postives = 190/232 (81.90%), Query Frame = 1 

		  

Query: 11  NHEKHSCDR-------SKPTLQAFIERVSHAVLHNIFLLYRSDPEFYVLGATGNVYIVNI 70
           NH+ H  D+       +KPT +AF ER +HA+LHN+ LLYRSDP  YVLG+TGNVYIVNI
Sbjct: 13  NHQHHHHDKQPNNIRSTKPTKEAFAERTTHALLHNLLLLYRSDPHLYVLGSTGNVYIVNI 72

Query: 71  TATPSCTCPDRATPCKHILFVLIRVLGVPLDDPSLKSQTLNPCHLERLQATSSSPKSLAS 130
           + TP+CTCPDRATPCKHILFVLI+VLGVPLDDPSL+ Q L P  +ERLQ T SSPKSLAS
Sbjct: 73  STTPTCTCPDRATPCKHILFVLIKVLGVPLDDPSLRKQALKPRQIERLQGTPSSPKSLAS 132

Query: 131 RTLRQRFHQMFFLKKELGIQGA-SIKPCMEADVGATCPICL-ETGRSGDRMVACETCKIP 190
           +TLRQRFHQ+FFLK ELGI+GA ++KPCM  + GATCPICL E  RSG+R+VACETCKIP
Sbjct: 133 QTLRQRFHQVFFLKNELGIRGAINLKPCMGVEAGATCPICLEEMRRSGERIVACETCKIP 192

Query: 191 IHEECLMTWKMTQKWKILTKCVTCRSQWRLK-RDQDRYVNLSNYVSEDELKM 233
           IHEECLMTWK  Q+ K LTKCVTCRSQWR K  + +RY+NL++YV EDE+ +
Sbjct: 193 IHEECLMTWKRAQE-KGLTKCVTCRSQWRGKLGNHERYLNLADYVIEDEMSL 243
[Close]
BLAST of Spo07568.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D171_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g032410 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.700e-66
Identity = 129/219 (58.90%), Postives = 167/219 (76.26%), Query Frame = 1 

		  

Query: 11  NHEKHSCDRSKPTLQAFIERVSHAVLHNIFLLYRSDPEFYVLGATGNVYIVNITATPSCT 70
           +HE+ S  R  PT QA  +R+  A+ H +FLL+RSDP FY+LGATGNVYIVN++ TP+CT
Sbjct: 18  HHERMSTTRFHPT-QALTDRILRALGHRLFLLHRSDPNFYILGATGNVYIVNVSTTPACT 77

Query: 71  CPDRATPCKHILFVLIRVLGVPLDDPSLKSQTLNPCHLERLQATSSSPKSLASRTLRQRF 130
           CPDRATPCKHILFVLI+VLGVPLDDP L+ +TL P  L RL A  SS  SLA  +LR+RF
Sbjct: 78  CPDRATPCKHILFVLIKVLGVPLDDPCLRKRTLRPNQLTRLLANPSSIYSLAGPSLRERF 137

Query: 131 HQMFFLKKELGIQGASIKPCMEADVGATCPICL-ETGRSGDRMVACETCKIPIHEECLMT 190
           HQ FFL++ELG  GA+  P    + GA CPICL E G++G+R+VAC TC+  +HE+CLMT
Sbjct: 138 HQAFFLQRELG--GAAHTPRPTIEEGAVCPICLEEMGKTGERLVACGTCRNSLHEQCLMT 197

Query: 191 WKMTQKWKILTKCVTCRSQWRLKRDQDRYVNLSNYVSED 229
           WK TQ+ +  + CV CRS+W+ + +Q++Y+NL+ YVSED
Sbjct: 198 WKRTQRRRSFS-CVICRSRWKDRANQEKYLNLAAYVSED 232
[Close]
BLAST of Spo07568.1 vs. UniProtKB/TrEMBL
Match: V7AVB0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G110100g PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 1.000e-58
Identity = 114/220 (51.82%), Postives = 151/220 (68.64%), Query Frame = 1 

		  

Query: 11  NHEKHSCDRSKPTLQAFIERVSHAVLHNIFLLYRSDPEFYVLGATGNVYIVNITATPSCT 70
           +H  H   R KP+ Q   +R+  A+ H + LL+R+   F++ GATGNVY V +++TPSCT
Sbjct: 24  HHHHHHHPRFKPS-QPISDRIVRALRHRLRLLHRAGSTFFIFGATGNVYTVTLSSTPSCT 83

Query: 71  CPDRATPCKHILFVLIRVLGVPLDDPSLKSQTLNPCHLERLQATSSSPKSLASRTLRQRF 130
           CPDR TPCKHILFV IRVLGV LDD  L+ +TL PC +ERL  T + P+++A  TLRQRF
Sbjct: 84  CPDRTTPCKHILFVFIRVLGVSLDDVCLRRRTLRPCQIERLLGTPTLPEAVAGGTLRQRF 143

Query: 131 HQMFFLKKELGIQGASIKPCMEADVGATCPICLETGRSGDRMVACETCKIPIHEECLMTW 190
           HQ+FF        G S +P +E + GATCP+CLE       +VAC TC+ PIHEECLM W
Sbjct: 144 HQLFF-------GGGSTRPKIETEEGATCPVCLEEMGKEQNLVACGTCRNPIHEECLMRW 203

Query: 191 KMTQKWKILTKCVTCRSQWRLKRDQDRYVNLSNYVSEDEL 231
           K T + +    CV CR++WR + +QD+Y+NLS YVSED++
Sbjct: 204 KRT-RGRRTASCVICRARWRDRVEQDKYLNLSAYVSEDDM 234
[Close]
BLAST of Spo07568.1 vs. UniProtKB/TrEMBL
Match: A0A0S3RCX7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G101500 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.900e-58
Identity = 113/220 (51.36%), Postives = 150/220 (68.18%), Query Frame = 1 

		  

Query: 11  NHEKHSCDRSKPTLQAFIERVSHAVLHNIFLLYRSDPEFYVLGATGNVYIVNITATPSCT 70
           NH  H   R KP+ Q   +R+  A+ H + LL+R+   F++ GATGNVY V +++TPSCT
Sbjct: 17  NHHHHHPPRFKPS-QPISDRIVRALRHRLRLLHRAGSTFFIFGATGNVYTVTLSSTPSCT 76

Query: 71  CPDRATPCKHILFVLIRVLGVPLDDPSLKSQTLNPCHLERLQATSSSPKSLASRTLRQRF 130
           CPDR TPCKHILFV IRVLGV LDD  L+ +TL PC L+RL    + P+++A  TLRQRF
Sbjct: 77  CPDRTTPCKHILFVFIRVLGVSLDDVCLRRRTLRPCQLQRLLGKPTLPEAVAGGTLRQRF 136

Query: 131 HQMFFLKKELGIQGASIKPCMEADVGATCPICLETGRSGDRMVACETCKIPIHEECLMTW 190
           HQ+FF        G S +P +E + GATCP+CLE      ++VAC TC+ P+HEECLM W
Sbjct: 137 HQLFF-------GGGSRRPKIETEEGATCPVCLEEMEKEQKLVACGTCRNPVHEECLMRW 196

Query: 191 KMTQKWKILTKCVTCRSQWRLKRDQDRYVNLSNYVSEDEL 231
           K T + +    CV CR++WR   +QD+Y+NLS YVSED++
Sbjct: 197 KRT-RGRRSASCVICRARWRDTAEQDQYLNLSAYVSEDDI 227
[Close]
BLAST of Spo07568.1 vs. TAIR (Arabidopsis)
Match: AT5G11620.1 (SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related)

HSP 1 Score: 150.6 bits (379), Expect = 2.800e-36
Identity = 93/239 (38.91%), Postives = 127/239 (53.14%), Query Frame = 1 

		  

Query: 25  QAFIERVSHAVLHNIFLLYRSDP-EFYVLGATGNVYIVNITATPSCTCPDRATPCKHILF 84
           Q   +R+  A+ H I LL+R +   F+VLGAT NVY V + ATP+CTCPDR  PCKHILF
Sbjct: 24  QPVADRILRALRHRIRLLHRPNAGTFHVLGATCNVYTVTLMATPTCTCPDRKKPCKHILF 83

Query: 85  VLIRVLGVPLDDPSLKSQTLNPCHLERLQATSSSPKSLASRTLRQRFHQMF---FLKKEL 144
           VLIRVLG+PLDD  L+ + L  C L  L +  + P  LAS  L+QRF Q+F     +   
Sbjct: 84  VLIRVLGIPLDDKCLRQRRLRTCLLFHLFSAPTRPDCLASFRLQQRFLQLFPATTSQPGY 143

Query: 145 GIQGASIKPCMEADVG---ATCPICLET---------GRSGDR-----MVACETCKIPIH 204
               +S    ME +V    ATCPICL+          G  G +     +V C  CK  +H
Sbjct: 144 TTNSSSSTSKMENEVDEEPATCPICLDDIIAIENVDGGNGGGKEKETAVVKCRVCKNKVH 203

Query: 205 EECLMTWKMTQKWKILTKCVTCRSQWRLKRDQDR--------------YVNLSNYVSED 229
           +EC++ W+ + + +    CV CR++W   R                  Y+NL+ YV E+
Sbjct: 204 DECMLAWRKS-RGRRPAICVVCRARWPANRSSKNPNVGDNNENCHGNCYLNLAPYVDEE 261
The following BLAST results are available for this feature:
BLAST of Spo07568.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902204739|gb|KNA14962.1|6.4e-11599.4hypothetical protein SOVF_1026... [more]
gi|731336483|ref|XP_010679282.1|1.4e-8569.4PREDICTED: mitogen-activated p... [more]
gi|870867150|gb|KMT18049.1|2.5e-6658.9hypothetical protein BVRB_2g03... [more]
gi|731317307|ref|XP_010668457.1|2.5e-6658.9PREDICTED: mitogen-activated p... [more]
gi|593324262|ref|XP_007137226.1|1.4e-5851.8hypothetical protein PHAVU_009... [more]
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BLAST of Spo07568.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R848_SPIOL4.4e-11599.4Uncharacterized protein OS=Spi... [more]
A0A0J8F3D5_BETVU9.7e-8669.4Uncharacterized protein OS=Bet... [more]
A0A0J8D171_BETVU1.7e-6658.9Uncharacterized protein OS=Bet... [more]
V7AVB0_PHAVU1.0e-5851.8Uncharacterized protein OS=Pha... [more]
A0A0S3RCX7_PHAAN2.9e-5851.3Uncharacterized protein OS=Vig... [more]
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BLAST of Spo07568.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07568.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G11620.12.8e-3638.9SWIM zinc finger family protei... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 59..87
score: 4.
IPR007527Zinc finger, SWIM-typePROFILEPS50966ZF_SWIMcoord: 59..89
score: 10
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 157..215
score: 2.
IPR022059Protein of unknown function DUF3615PFAMPF12274DUF3615coord: 429..514
score: 3.
NoneNo IPR availablePANTHERPTHR21540RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2coord: 1..229
score: 6.2
NoneNo IPR availablePANTHERPTHR21540:SF1PHD FAMILY PROTEINcoord: 1..229
score: 6.2
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 158..214
score: 5.6

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding