Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGCAGGAGTGAAAACCCAAACAAATTTGCACCGTGATCAATTTTGGCTTCTTTCTTTCCCAATTCCCATTTTTGGAGAGCTTTTCTCCCTCTTTTGAATGCACCACTTTTCAATTTCAACTGATTTCTTGAAAAAAAAAACATTTTTAATATTAAATTAAATTAAAAAGCTTGAATCTTTTCACTTATAAATAAGAGTTAAAAAAAAGTGAAGAAGATTCACAAAACCCAGAAACTAAAAACAGATATTGAAAGTTCTGATTTTTTTTAATTTTTCTGCCAAATTTTTAGATGGGTATTCCTTAAATTTGTTTAATCAACCAAAAAAGAAATACGCATCTATAAATTTCATCTGGGTCATCTTTATTTTTGCTGATTTTTATTAAAAAGTAAGTGATTTTGAAGAATTTGTTTACAAAAAGCTGGTTTATAAGAAAAACAGGGTGGGTTTATTAGGTGGAAGTTATTAAATTTGTTAAAATAGCCCAACAAAAATTTTCCAAGAATTTCATCTGAAATTTTAAAGAATTAATAAAAAAAAAAGCTAAGATTTTAAAGGAAAAAGGGTGGATTGATTAAAGTTTTGAATTTTATTGGGGTTGGGGAATGCAAAGAGAGATTAACATGGAATTTTGGCCAGAATTTCTAGCAAGCAGTTGGGGAAAAGAATTTGTGGCAGGTGGGTTTGGTGGAATCGCCGGAGTTGCCGCCGGATATCCGTTGGATACGCTAAGAATCCGGCAACAGAGTTCAAGTTCCGGTGGTGCAATTAATATTTTCCGGCGAATTCTTGCCACCGAAGGACCCTCTGCTTTTTACAGGGGTATGGGTGCTCCCTTAGCCTCTGTCACTTTTCAGGTTTGCCTAAATCTTTTTTTTCCTTTTTTGTGTGTATTATTTTGAAGAATTATTTTTATTTTATTTTTAATTTTTCAATTTTGTGGTTTGAAAGTATTGAATGTGTTTGATTTTGGTTTGATTTTTTTGTTGGGATAATTACTTTTTTGGTGGTTCTTTTAGGATACCATTTGATCCTGGGAATCTACTGTTTTCTGGGAATCTTATGCCAGTTTCTTGTGGGTAAGAAGGGAAAAAGGTCCTATCCTGTTTGTTTTATTACTTGGAATAATTAAATTGATTAATTTTTGTTACGGGTTCTTCATTTTATCTCAAAATACTCGTATTAAATGGACACGGACCTTTTATTTTTAAGGAAATAGGTCTTACCCCTTGTGTTTTAGTACTCCTTATTTGAATAAGTTGATTGAATTGTTTAAATGTAAAGTGTATGCATCATAACTTCATAAGTTGTTACTCCGTATGTTATGTTACCGGAATCTTATGTTACACAACCGGAATCTTATGTAACATCAAGTATCCGTGTTGAATATATGCTCGACACTCATATATGGATATGAGACAGTATATGATTCTTAAACATTTCATTTTGAATCAAAATCATGCAAAACTTTCACAAGATCACACTGTATTGTATTGCCTTAGGCTAGTAATAAAGCATGGTTCTTGGTTTCAATTTTTTTCATCTGAATTCATAAGGTCAAGGCAATTTGTTGCCTCAAGTTATGAATTTGACACTACCCCAAATTGCCATAAATATGTGATTGTGAAACCGAATCGGAATTGTACATGTTCATGACGATCTAACTGCTACGGAGTATGTTACCTGAACTCTTCATTTTACTTCAAATACCTGTGTCGGATCCTCGGCACTCGGACATGGATATAGACACTTCAACAATTCATATTGGAGAAAAATTATGCAATTTTTCACAAAATAGTTGTGTTGGACATTTGGACACGTACCCGTGTCTGGTATGGGTATCTGAGTCCGATTAACTGATTACTTGGTGGTCTTGTGAAATTTTAAGGCAAATTATAAAGCCTAGAATTTGAAACCAAAAAAAGTGTTATAAACTTTCAAGAGAAAAACTATTCATTGTGCTTGTGTACTGAATAGCCTATTTACATTTCTCTAATAGGTTATGAGTACTGAGTAGCCTCAAAACTTCTAATCTCGTGCTTAAGCTTAATTTCTCTTCAATTTTGCAGAATGCCGTGGTTTTCCAAACATACGCACTCCTATCACGGGCGTGTGACAAATCCGTTGATGATCCAAGAGAACCTCCTTCGTACAAAGGAGTAGCCTTAGGCGGAGTTGGCACCGGTGCACTTCAAAGTCTTATACTAAGTCCCGTTGAGCTCCTAAAAATCCGTCTTCAGTTAAAGCAAACCACCAATGTGGGACCGAGTACTAAAAACGGTCCAACAAAGTTAGCCAAAACCATTTACAAAACCGAAGGTCTAAGAGGGTTATACCGAGGGTTAACCATCACGGTTCTAAGGGATGCACCGGCTCACGGGCTATACTTTTGGACATACGAGTACATGAGAGAAAAGCTACACCCTGGGTGTAGGAAAGGCGGTCAAGAGACGTTAAATACAATGCTTGTGGCAGGTGGGTTAGCCGGAGTTGCCAGCTGGATAGCGTGTTATCCGTTAGACGTGGTCAAGACTAGACTACAAGCACAGACAAAGGGTTCAATGAAGTATAGTGGGATTGTTGATTGTTTTAGGAAGAGTGTTGAGAAAGATGGTTATGGTGTTTTGACTAGAGGTTTGGGAACAGCGGTTTGTAGAGCTTTTGTTGTGAATGGAGCTATTTTTGCTGCATATGAGCTTTCTTTGAGGTGTTTGTTTAGTGGTGTTGGTAATGAGAGTATTCAGGCAGCTGAGAGTACACTGAAGGTTTCAGGATCTTAGGCTCCGTTTGGTTTGGTGTAAAACGTTTTCAGTGCAAAATGATTTTTCGTGGAAAACATTTTTCAAGAGAAAACCCAATTTCAAACTAGCAACGTAAAATGATTGAAAGGGGAAAATTCGTTTTCCACCCTACCAAACGGAACCTTAAGGTAGCAACACCATATATGATCATCTTCAAGTGTTTAAACAGTCTGATTAACATATATTGGGTAATTGCAGTGAAATTCAAAGATATCAGGCATACAGAAATGTATGATTTGTATTGCTAGATAAGCCATGTGCTTGATTTGCTGCTTCTTGTTCAGAAACCTCTGTCTCTGTTGTATGAAGATGCAAGAAAATGCAATTGGAAAAATTGTTGATGAATCAATTTGACATTGTAATATATTCACAAGTGCATACATTTCAACTGGTATGTTGATCAGTTGTATGTAGACCTGGTTATTGGACAGGGTAGTCCAAATGTCCAATGGATATAGGATTAGGGTCAAGTTAATAGGGCTTTTATTGGGCAGGACTCTTATTGGACAGGGCCTTTATTGGACAAGGTCATTATAGGGTCAAACTTATACTACAATTATTTTGAAAATAAAAATAGTAATGATACAAAAAATTACATGCATAGCTTCGTATTTACTTGTACTTGCACATGGCTCTTTTGTTTTTCATTTTTCATTGCTCGTTTATTGACCCGCGACCCGCTTTTGACCCGCCCATTATCGACCCTCTAAAAATGACCCTTTCAATACCCGACCCTCTTTTGACCCGCACCGACCCTGACCCGCCCCGCCCGATAACCAGGCCTAGTTGTATGCAACTCAATATGAAAAANACCCTTTCAATACCCGACCCTCTTTTGACCCGCACCGACCCTGACCCGCCCCGCCCG TTGCAGGAGTGAAAACCCAAACAAATTTGCACCGTGATCAATTTTGGCTTCTTTCTTTCCCAATTCCCATTTTTGGAGAGCTTTTCTCCCTCTTTTGAATGCACCACTTTTCAATTTCAACTGATTTCTTGAAAAAAAAAACATTTTTAATATTAAATTAAATTAAAAAGCTTGAATCTTTTCACTTATAAATAAGAGTTAAAAAAAAGTGAAGAAGATTCACAAAACCCAGAAACTAAAAACAGATATTGAAAGTTCTGATTTTTTTTAATTTTTCTGCCAAATTTTTAGATGGGTATTCCTTAAATTTGTTTAATCAACCAAAAAAGAAATACGCATCTATAAATTTCATCTGGGTCATCTTTATTTTTGCTGATTTTTATTAAAAAGTAAGTGATTTTGAAGAATTTGTTTACAAAAAGCTGGTTTATAAGAAAAACAGGGTGGGTTTATTAGGTGGAAGTTATTAAATTTGTTAAAATAGCCCAACAAAAATTTTCCAAGAATTTCATCTGAAATTTTAAAGAATTAATAAAAAAAAAAGCTAAGATTTTAAAGGAAAAAGGGTGGATTGATTAAAGTTTTGAATTTTATTGGGGTTGGGGAATGCAAAGAGAGATTAACATGGAATTTTGGCCAGAATTTCTAGCAAGCAGTTGGGGAAAAGAATTTGTGGCAGGTGGGTTTGGTGGAATCGCCGGAGTTGCCGCCGGATATCCGTTGGATACGCTAAGAATCCGGCAACAGAGTTCAAGTTCCGGTGGTGCAATTAATATTTTCCGGCGAATTCTTGCCACCGAAGGACCCTCTGCTTTTTACAGGGGTATGGGTGCTCCCTTAGCCTCTGTCACTTTTCAGAATGCCGTGGTTTTCCAAACATACGCACTCCTATCACGGGCGTGTGACAAATCCGTTGATGATCCAAGAGAACCTCCTTCGTACAAAGGAGTAGCCTTAGGCGGAGTTGGCACCGGTGCACTTCAAAGTCTTATACTAAGTCCCGTTGAGCTCCTAAAAATCCGTCTTCAGTTAAAGCAAACCACCAATGTGGGACCGAGTACTAAAAACGGTCCAACAAAGTTAGCCAAAACCATTTACAAAACCGAAGGTCTAAGAGGGTTATACCGAGGGTTAACCATCACGGTTCTAAGGGATGCACCGGCTCACGGGCTATACTTTTGGACATACGAGTACATGAGAGAAAAGCTACACCCTGGGTGTAGGAAAGGCGGTCAAGAGACGTTAAATACAATGCTTGTGGCAGGTGGGTTAGCCGGAGTTGCCAGCTGGATAGCGTGTTATCCGTTAGACGTGGTCAAGACTAGACTACAAGCACAGACAAAGGGTTCAATGAAGTATAGTGGGATTGTTGATTGTTTTAGGAAGAGTGTTGAGAAAGATGGTTATGGTGTTTTGACTAGAGGTTTGGGAACAGCGGTTTGTAGAGCTTTTGTTGTGAATGGAGCTATTTTTGCTGCATATGAGCTTTCTTTGAGGTGTTTGTTTAGTGGTGTTGGTAATGAGAGTATTCAGGCAGCTGAGAGTACACTGAAGGTTTCAGGATCTTAGGCTCCGTTTGGTTTGGTGTAAAACGTTTTCAGTGCAAAATGATTTTTCGTGGAAAACATTTTTCAAGAGAAAACCCAATTTCAAACTAGCAACGTAAAATGATTGAAAGGGGAAAATTCGTTTTCCACCCTACCAAACGGAACCTTAAGGTAGCAACACCATATATGATCATCTTCAAGTGTTTAAACAGTCTGATTAACATATATTGGGTAATTGCAGTGAAATTCAAAGATATCAGGCATACAGAAATGTATGATTTGTATTGCTAGATAAGCCATGTGCTTGATTTGCTGCTTCTTGTTCAGAAACCTCTGTCTCTGTTGTATGAAGATGCAAGAAAATGCAATTGGAAAAATTGTTGATGAATCAATTTGACATTGTAATATATTCACAAGTGCATACATTTCAACTGGTATGTTGATCAGTTGTATGTAGACCTGGTTATTGGACAGGGTAGTCCAAATGTCCAATGGATATAGGATTAGGGTCAAGTTAATAGGGCTTTTATTGGGCAGGACTCTTATTGGACAGGGCCTTTATTGGACAAGGTCATTATAGGGTCAAACTTATACTACAATTATTTTGAAAATAAAAATAGTAATGATACAAAAAATTACATGCATAGCTTCGTATTTACTTGTACTTGCACATGGCTCTTTTGTTTTTCATTTTTCATTGCTCGTTTATTGACCCGCGACCCGCTTTTGACCCGCCCATTATCGACCCTCTAAAAATGACCCTTTCAATACCCGACCCTCTTTTGACCCGCACCGACCCTGACCCGCCCCGCCCGATAACCAGGCCTAGTTGTATGCAACTCAATATGAAAAANACCCTTTCAATACCCGACCCTCTTTTGACCCGCACCGACCCTGACCCGCCCCGCCCG ATGCAAAGAGAGATTAACATGGAATTTTGGCCAGAATTTCTAGCAAGCAGTTGGGGAAAAGAATTTGTGGCAGGTGGGTTTGGTGGAATCGCCGGAGTTGCCGCCGGATATCCGTTGGATACGCTAAGAATCCGGCAACAGAGTTCAAGTTCCGGTGGTGCAATTAATATTTTCCGGCGAATTCTTGCCACCGAAGGACCCTCTGCTTTTTACAGGGGTATGGGTGCTCCCTTAGCCTCTGTCACTTTTCAGAATGCCGTGGTTTTCCAAACATACGCACTCCTATCACGGGCGTGTGACAAATCCGTTGATGATCCAAGAGAACCTCCTTCGTACAAAGGAGTAGCCTTAGGCGGAGTTGGCACCGGTGCACTTCAAAGTCTTATACTAAGTCCCGTTGAGCTCCTAAAAATCCGTCTTCAGTTAAAGCAAACCACCAATGTGGGACCGAGTACTAAAAACGGTCCAACAAAGTTAGCCAAAACCATTTACAAAACCGAAGGTCTAAGAGGGTTATACCGAGGGTTAACCATCACGGTTCTAAGGGATGCACCGGCTCACGGGCTATACTTTTGGACATACGAGTACATGAGAGAAAAGCTACACCCTGGGTGTAGGAAAGGCGGTCAAGAGACGTTAAATACAATGCTTGTGGCAGGTGGGTTAGCCGGAGTTGCCAGCTGGATAGCGTGTTATCCGTTAGACGTGGTCAAGACTAGACTACAAGCACAGACAAAGGGTTCAATGAAGTATAGTGGGATTGTTGATTGTTTTAGGAAGAGTGTTGAGAAAGATGGTTATGGTGTTTTGACTAGAGGTTTGGGAACAGCGGTTTGTAGAGCTTTTGTTGTGAATGGAGCTATTTTTGCTGCATATGAGCTTTCTTTGAGGTGTTTGTTTAGTGGTGTTGGTAATGAGAGTATTCAGGCAGCTGAGAGTACACTGAAGGTTTCAGGATCTTAG MQREINMEFWPEFLASSWGKEFVAGGFGGIAGVAAGYPLDTLRIRQQSSSSGGAINIFRRILATEGPSAFYRGMGAPLASVTFQNAVVFQTYALLSRACDKSVDDPREPPSYKGVALGGVGTGALQSLILSPVELLKIRLQLKQTTNVGPSTKNGPTKLAKTIYKTEGLRGLYRGLTITVLRDAPAHGLYFWTYEYMREKLHPGCRKGGQETLNTMLVAGGLAGVASWIACYPLDVVKTRLQAQTKGSMKYSGIVDCFRKSVEKDGYGVLTRGLGTAVCRAFVVNGAIFAAYELSLRCLFSGVGNESIQAAESTLKVSGS Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo07221.1 vs. NCBI nr
Match: gi|902213279|gb|KNA17224.1| (hypothetical protein SOVF_082050 [Spinacia oleracea]) HSP 1 Score: 622.1 bits (1603), Expect = 5.500e-175 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 1
BLAST of Spo07221.1 vs. NCBI nr
Match: gi|731359498|ref|XP_010691315.1| (PREDICTED: mitochondrial arginine transporter BAC2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 556.2 bits (1432), Expect = 3.700e-155 Identity = 279/320 (87.19%), Postives = 298/320 (93.12%), Query Frame = 1
BLAST of Spo07221.1 vs. NCBI nr
Match: gi|728826070|gb|KHG06549.1| (Solute carrier family 25 member 45 [Gossypium arboreum]) HSP 1 Score: 453.8 bits (1166), Expect = 2.600e-124 Identity = 222/299 (74.25%), Postives = 253/299 (84.62%), Query Frame = 1
BLAST of Spo07221.1 vs. NCBI nr
Match: gi|590618848|ref|XP_007024156.1| (Mitochondrial substrate carrier family protein [Theobroma cacao]) HSP 1 Score: 453.4 bits (1165), Expect = 3.400e-124 Identity = 225/313 (71.88%), Postives = 263/313 (84.03%), Query Frame = 1
BLAST of Spo07221.1 vs. NCBI nr
Match: gi|823244765|ref|XP_012455049.1| (PREDICTED: mitochondrial arginine transporter BAC2-like isoform X1 [Gossypium raimondii]) HSP 1 Score: 452.2 bits (1162), Expect = 7.500e-124 Identity = 224/311 (72.03%), Postives = 260/311 (83.60%), Query Frame = 1
BLAST of Spo07221.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RE05_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_082050 PE=3 SV=1) HSP 1 Score: 622.1 bits (1603), Expect = 3.800e-175 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 1
BLAST of Spo07221.1 vs. UniProtKB/TrEMBL
Match: A0A0B0N3W2_GOSAR (Solute carrier family 25 member 45 OS=Gossypium arboreum GN=F383_33231 PE=3 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 1.800e-124 Identity = 222/299 (74.25%), Postives = 253/299 (84.62%), Query Frame = 1
BLAST of Spo07221.1 vs. UniProtKB/TrEMBL
Match: A0A061GBK6_THECC (Mitochondrial substrate carrier family protein OS=Theobroma cacao GN=TCM_028737 PE=3 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 2.300e-124 Identity = 225/313 (71.88%), Postives = 263/313 (84.03%), Query Frame = 1
BLAST of Spo07221.1 vs. UniProtKB/TrEMBL
Match: A0A0D2T453_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G075400 PE=3 SV=1) HSP 1 Score: 452.2 bits (1162), Expect = 5.200e-124 Identity = 224/311 (72.03%), Postives = 260/311 (83.60%), Query Frame = 1
BLAST of Spo07221.1 vs. UniProtKB/TrEMBL
Match: B9GFP3_POPTR (Mitochondrial substrate carrier family protein OS=Populus trichocarpa GN=POPTR_0001s18230g PE=3 SV=1) HSP 1 Score: 447.6 bits (1150), Expect = 1.300e-122 Identity = 222/315 (70.48%), Postives = 264/315 (83.81%), Query Frame = 1
BLAST of Spo07221.1 vs. ExPASy Swiss-Prot
Match: BAC2_ARATH (Mitochondrial arginine transporter BAC2 OS=Arabidopsis thaliana GN=BAC2 PE=1 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 3.500e-121 Identity = 219/296 (73.99%), Postives = 253/296 (85.47%), Query Frame = 1
BLAST of Spo07221.1 vs. ExPASy Swiss-Prot
Match: MCATL_BOVIN (Mitochondrial basic amino acids transporter OS=Bos taurus GN=SLC25A29 PE=2 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 2.900e-51 Identity = 117/283 (41.34%), Postives = 169/283 (59.72%), Query Frame = 1
BLAST of Spo07221.1 vs. ExPASy Swiss-Prot
Match: MCATL_MOUSE (Mitochondrial basic amino acids transporter OS=Mus musculus GN=Slc25a29 PE=1 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 7.200e-50 Identity = 115/283 (40.64%), Postives = 167/283 (59.01%), Query Frame = 1
BLAST of Spo07221.1 vs. ExPASy Swiss-Prot
Match: MCATL_RAT (Mitochondrial basic amino acids transporter OS=Rattus norvegicus GN=Slc25a29 PE=2 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 7.900e-49 Identity = 112/283 (39.58%), Postives = 166/283 (58.66%), Query Frame = 1
BLAST of Spo07221.1 vs. ExPASy Swiss-Prot
Match: MCATL_HUMAN (Mitochondrial basic amino acids transporter OS=Homo sapiens GN=SLC25A29 PE=1 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 8.700e-48 Identity = 118/301 (39.20%), Postives = 171/301 (56.81%), Query Frame = 1
BLAST of Spo07221.1 vs. TAIR (Arabidopsis)
Match: AT1G79900.1 (Mitochondrial substrate carrier family protein) HSP 1 Score: 436.0 bits (1120), Expect = 2.000e-122 Identity = 219/296 (73.99%), Postives = 253/296 (85.47%), Query Frame = 1
BLAST of Spo07221.1 vs. TAIR (Arabidopsis)
Match: AT5G46800.1 (Mitochondrial substrate carrier family protein) HSP 1 Score: 153.3 bits (386), Expect = 2.500e-37 Identity = 99/304 (32.57%), Postives = 158/304 (51.97%), Query Frame = 1
BLAST of Spo07221.1 vs. TAIR (Arabidopsis)
Match: AT2G33820.1 (Mitochondrial substrate carrier family protein) HSP 1 Score: 135.6 bits (340), Expect = 5.500e-32 Identity = 85/297 (28.62%), Postives = 149/297 (50.17%), Query Frame = 1
BLAST of Spo07221.1 vs. TAIR (Arabidopsis)
Match: AT1G34065.1 (S-adenosylmethionine carrier 2) HSP 1 Score: 110.2 bits (274), Expect = 2.500e-24 Identity = 80/280 (28.57%), Postives = 128/280 (45.71%), Query Frame = 1
BLAST of Spo07221.1 vs. TAIR (Arabidopsis)
Match: AT4G39460.1 (S-adenosylmethionine carrier 1) HSP 1 Score: 108.6 bits (270), Expect = 7.200e-24 Identity = 86/279 (30.82%), Postives = 125/279 (44.80%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07221.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07221.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07221.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo07221.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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