Spo06271.1 (mRNA) | SpinachBase

Overview


Name	Spo06271.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	High mobility group B protein 15
Location	SpoScf_02531 : 20570 .. 24147 (-)
Sequence length	1729

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAGGGTTTACTTTAATAAAAAAAAAAGGTCCTCCATTTTCAGTCTCTCTCTGTCTTCTACAGTTGGGTAAGTATTTCATTAATTTTTGAATTATTATTATTAATTGAAGTATTAAAGTAGCTAATTTTATTTCTAATTTAGTGTATGTGATTTTAATGTGATTGCTATTGTTTCATCTGTCACGCATGCTACTGTGCTATTCTTGCCATCATTCAATACATATTATAAATACCAAATAATAATAATAACAAATTAAGAACCCACCTGAGTTCGTTCGTATTTTATTTAAATTATTATCATGATTAGTTTGATTAAAATCTCTAATGGGGTTTCCTTGTTTTTCACATATTTAGGGTTTGTTTGTATAAATTGTATGGACTGATTTAAAGGTGCAAACCTCAAATATATAAATATAAATATTGGGATTCCATCTTCTTTCTTTTTCTGTCAAATAATTATCTTTGGAAATGTTTATAATTATAAATTTGGGAATGAAAAGAAGATATGAGCAAAATTGAAAGTTGTGTGCTTTAATTTAAATTTATGGACATTTACTTGTACGGAGTGGAGTGTGGATTGAAATTCAATGTTCCTGTTTTATTCTTGGCTGGCTACAGAAGAGTGCAGTGCAGTATAAATGTATAATAGAATAGCAATTAGTAACAATAAAATGTGATTGCTGCGCAGGGAAAGCATACACTATGATTGATAAAGGAATGTCATCAGGTAGCAATAAGCACCTTGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAAGTATGAGGATGTTGTTTCTAATCGTCAACTTTTTATGACTACACTCGAGAACCTTCATGCTGCTATGTCCACCAAGTTCATGTAACTCGTCTTTCTAACTTTGTTACCACAACCTTATACTATCTTCTTCTAAATCAACCTTATTATTACAGGATTCCTGTTATAGGAGGCCGGGATCTTGACCTGCACAAGCTTTTTGTCGAGGTTACTTCTCGGGGTGGTATTGACAAGGTGCATTTCAATCATCTAACTAAAACCAAACCTTGTTGTATCTACTTACCTGCTAGCTTAGCTCATGTACTCTTCACTAGCTACATTATGAATACATTTGTTGATTTCGCTGCTGTTTACAGATACTAGCAGAAAAAAGATGGAAAGATGTTACAGCCACTTTCAATTTCCCATCCACAGCCACAAACGCCTCTTTTGTGCTGCGTAAATACTACTATTCTTTGCTTCAACACTATGAGCGAATCTACTACTTCAAATCACAGGATTGCCCTCCTGGTAGTGGTACCTCTCTATGCCTGCATATATCCTCAATCTTTGTTTTTACTAGACTATGTAGCTTCTATAATACTGGATTTGTATTGCAGGTGTTTTGCAGAGTCTGAATGCTACACCTGTTGCAGTCCATGGAACGGCTAAAATGTCCCCATCACCCACACCATCTCACCCTGCAAATGTCCAACAGAACCAAATAAACTCTACAGAGTTTGTGTCTCAAGGTCTGCTTAATTTCCCATTTTATAGTCAAGTAATCATCTATCTCATGTGCTGCTGAATTTCTTCTAGGTTTGTATCTGTGAGACTGTGAAATGTGATTTCAGTCACTGATTCACTGTATGGTCTTATACTATAAACAAATGCTGCTATAGTATGTAAGAGAAACATCATCCGGGGTCTTGTCTATACGGAGTATTTCTATAGTCCTTCGGAAAATTTTGGAATACCTGATCTCGTTCTCTTTTATTTCATTTTTGTAGTGTTATGTTCGTATGAACAAATACTAACACGTTATAGTCAACCTATAACAGGGCTAATTGTTTGATACTTGAGAGTTGGAAATTACCCAAAGAAGTTAGTTCAAAGTCAAATTAGAAGATAATCTGTATTAGACAACTGAAGAAGACAGGAAAGAAAATCCTACAAATTAAGCTTTTCCAGAACATGTTATAGTATGCTGCATACTTTTTTGTTTTCTGCAACTCAACAAAACTGTAACCATCCATTAAATTGTAATGTATGTTCGAATCAAACATTTATTTTTTTTTGTTATTTACACGAGTTAAGCATAGAACTAGTTGCTACTGAAAGAAACTAAATTGCTTCTACAAAGCTTCACAACAGTATGGGATTTACCGTCACTGGAAATGTTTTGGAAACCGTTTGATATTATGGATATCTGAATTTCATTTACTAATGCAAGATTGCAAGTACACAATCTCTGTATGTGCTTCGTAAAAGCAAGTTGAAGTAACCTGTCAAATTGTGGCAGACTTAAAGGACTCTTGTTCCAAATTTGTTCTGGTTTGATACAGTATTGCAGTATACTAACCTTCATTTTCCTTCTGGTTGGCCACAGCACCATCTGGGGGGTACCCTATCATTGGAGTGATAGATGGAAAGTTCGATAGTGGTTACCTTGTTACTGTAACAATTGGGAAGGACAAACTGAAAGGGGTTCTCTATCAGACTCCACCAGCTAAAATGAATCAAGTGGCGCAATCATCTGGTGTCTCAACTGTCAAAACTGATAGTACTCGTGCAACATCAGGTGTGCCTCGTAGGAGGAAAAGGAGGAAGAAGTCTGAGTTACGGAAGAGAGATCCCACTCACCCTAAACCTAATAGAAGTGGTTACAACTTCTTCTTTGCCGAGCAACATGCCAGATTGAAGCCACTTCATCCAGGCAAGGACCGGGAGATTAGTAGGATGATTGGTGAACTCTGGAACAAATTGAAGGACAATGAAAAGGCTGTAAGAATTTCAACTTGAAATGATTTTGTTGACAATAAAGTATCATGTGATTTTTAACCAGATATTTACCCAGATAAACTGTTGTCTGTGCTCAGGTGTATCAAGCAAAAGCAATTAAGGACAAAGAAAGGTACAAGACAGAAATGGAAGATTATAAAGAGAGACTAAGGACAAATCAGGTGATAAGTGATGCAATACCAATACAGCAGAGGTTTCCTGATATAGATGTAGAAATGGCGGAAGTGGATGGAAAAGATGAGACAGAGAGAGATTCCCAAGAATCACCTGAAAATGAAAGTGATTCTAGTAAGAGCGAGACTGATGAAGACGAGGATGATGACGATGAGGAGTTTTGTGATGCAGATACACCTCCAGCACCAGATAATGCAGGTACTTCTGAAGCCTCGGTAGCAGCAGGAGCAGGAACAGGAACAGGAACAGGGGAGTTTGAAGTTGTTAAGGGAGCGGAGAAAGGAGGTTTCAAAGAAAGTCATGTTAATGTGGGAGACGAAGCAATATTCAGCACCTGATATTGAGCATGAGAATTTGATAGTGACATAGTTATAAATTAGTTAGGAACAACCCCTAGCAATTCAAGTTGACCCTTTTGTAAATTTTTATTGGTTGAATATCGGTATGCACATCTGTTAGAGACAGTTGTTACTTATTTAGGCTTCTCAAGAAGGAACTTCTGTTACAGATAACCAGGTGATTACACGACTTTGCAGTTTTGTTGGTTATGGGTTTCTTTGCTGCTTAATGGAATTCTAATGAAATTGCTGCATGTCCTAACAGTTTTATTCCCCT

mRNA sequence

AAATAAGGGTTTACTTTAATAAAAAAAAAAGGTCCTCCATTTTCAGTCTCTCTCTGTCTTCTACAGTTGGGGAAAGCATACACTATGATTGATAAAGGAATGTCATCAGGTAGCAATAAGCACCTTGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAAGTATGAGGATGTTGTTTCTAATCGTCAACTTTTTATGACTACACTCGAGAACCTTCATGCTGCTATGTCCACCAAGTTCATGATTCCTGTTATAGGAGGCCGGGATCTTGACCTGCACAAGCTTTTTGTCGAGGTTACTTCTCGGGGTGGTATTGACAAGATACTAGCAGAAAAAAGATGGAAAGATGTTACAGCCACTTTCAATTTCCCATCCACAGCCACAAACGCCTCTTTTGTGCTGCGTAAATACTACTATTCTTTGCTTCAACACTATGAGCGAATCTACTACTTCAAATCACAGGATTGCCCTCCTGGTAGTGGTGTTTTGCAGAGTCTGAATGCTACACCTGTTGCAGTCCATGGAACGGCTAAAATGTCCCCATCACCCACACCATCTCACCCTGCAAATGTCCAACAGAACCAAATAAACTCTACAGAGTTTGTGTCTCAAGCACCATCTGGGGGGTACCCTATCATTGGAGTGATAGATGGAAAGTTCGATAGTGGTTACCTTGTTACTGTAACAATTGGGAAGGACAAACTGAAAGGGGTTCTCTATCAGACTCCACCAGCTAAAATGAATCAAGTGGCGCAATCATCTGGTGTCTCAACTGTCAAAACTGATAGTACTCGTGCAACATCAGGTGTGCCTCGTAGGAGGAAAAGGAGGAAGAAGTCTGAGTTACGGAAGAGAGATCCCACTCACCCTAAACCTAATAGAAGTGGTTACAACTTCTTCTTTGCCGAGCAACATGCCAGATTGAAGCCACTTCATCCAGGCAAGGACCGGGAGATTAGTAGGATGATTGGTGAACTCTGGAACAAATTGAAGGACAATGAAAAGGCTGTGTATCAAGCAAAAGCAATTAAGGACAAAGAAAGGTACAAGACAGAAATGGAAGATTATAAAGAGAGACTAAGGACAAATCAGGTGATAAGTGATGCAATACCAATACAGCAGAGGTTTCCTGATATAGATGTAGAAATGGCGGAAGTGGATGGAAAAGATGAGACAGAGAGAGATTCCCAAGAATCACCTGAAAATGAAAGTGATTCTAGTAAGAGCGAGACTGATGAAGACGAGGATGATGACGATGAGGAGTTTTGTGATGCAGATACACCTCCAGCACCAGATAATGCAGGTACTTCTGAAGCCTCGGTAGCAGCAGGAGCAGGAACAGGAACAGGAACAGGGGAGTTTGAAGTTGTTAAGGGAGCGGAGAAAGGAGGTTTCAAAGAAAGTCATGTTAATGTGGGAGACGAAGCAATATTCAGCACCTGATATTGAGCATGAGAATTTGATAGTGACATAGTTATAAATTAGTTAGGAACAACCCCTAGCAATTCAAGTTGACCCTTTTGTAAATTTTTATTGGTTGAATATCGGTATGCACATCTGTTAGAGACAGTTGTTACTTATTTAGGCTTCTCAAGAAGGAACTTCTGTTACAGATAACCAGGTGATTACACGACTTTGCAGTTTTGTTGGTTATGGGTTTCTTTGCTGCTTAATGGAATTCTAATGAAATTGCTGCATGTCCTAACAGTTTTATTCCCCT

Coding sequence (CDS)

ATGATTGATAAAGGAATGTCATCAGGTAGCAATAAGCACCTTGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAAGTATGAGGATGTTGTTTCTAATCGTCAACTTTTTATGACTACACTCGAGAACCTTCATGCTGCTATGTCCACCAAGTTCATGATTCCTGTTATAGGAGGCCGGGATCTTGACCTGCACAAGCTTTTTGTCGAGGTTACTTCTCGGGGTGGTATTGACAAGATACTAGCAGAAAAAAGATGGAAAGATGTTACAGCCACTTTCAATTTCCCATCCACAGCCACAAACGCCTCTTTTGTGCTGCGTAAATACTACTATTCTTTGCTTCAACACTATGAGCGAATCTACTACTTCAAATCACAGGATTGCCCTCCTGGTAGTGGTGTTTTGCAGAGTCTGAATGCTACACCTGTTGCAGTCCATGGAACGGCTAAAATGTCCCCATCACCCACACCATCTCACCCTGCAAATGTCCAACAGAACCAAATAAACTCTACAGAGTTTGTGTCTCAAGCACCATCTGGGGGGTACCCTATCATTGGAGTGATAGATGGAAAGTTCGATAGTGGTTACCTTGTTACTGTAACAATTGGGAAGGACAAACTGAAAGGGGTTCTCTATCAGACTCCACCAGCTAAAATGAATCAAGTGGCGCAATCATCTGGTGTCTCAACTGTCAAAACTGATAGTACTCGTGCAACATCAGGTGTGCCTCGTAGGAGGAAAAGGAGGAAGAAGTCTGAGTTACGGAAGAGAGATCCCACTCACCCTAAACCTAATAGAAGTGGTTACAACTTCTTCTTTGCCGAGCAACATGCCAGATTGAAGCCACTTCATCCAGGCAAGGACCGGGAGATTAGTAGGATGATTGGTGAACTCTGGAACAAATTGAAGGACAATGAAAAGGCTGTGTATCAAGCAAAAGCAATTAAGGACAAAGAAAGGTACAAGACAGAAATGGAAGATTATAAAGAGAGACTAAGGACAAATCAGGTGATAAGTGATGCAATACCAATACAGCAGAGGTTTCCTGATATAGATGTAGAAATGGCGGAAGTGGATGGAAAAGATGAGACAGAGAGAGATTCCCAAGAATCACCTGAAAATGAAAGTGATTCTAGTAAGAGCGAGACTGATGAAGACGAGGATGATGACGATGAGGAGTTTTGTGATGCAGATACACCTCCAGCACCAGATAATGCAGGTACTTCTGAAGCCTCGGTAGCAGCAGGAGCAGGAACAGGAACAGGAACAGGGGAGTTTGAAGTTGTTAAGGGAGCGGAGAAAGGAGGTTTCAAAGAAAGTCATGTTAATGTGGGAGACGAAGCAATATTCAGCACCTGA

Protein sequence

MIDKGMSSGSNKHLDAAAAAAAAAAAAAKYEDVVSNRQLFMTTLENLHAAMSTKFMIPVIGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQHYERIYYFKSQDCPPGSGVLQSLNATPVAVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQAPSGGYPIIGVIDGKFDSGYLVTVTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDSTRATSGVPRRRKRRKKSELRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKDNEKAVYQAKAIKDKERYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMAEVDGKDETERDSQESPENESDSSKSETDEDEDDDDEEFCDADTPPAPDNAGTSEASVAAGAGTGTGTGEFEVVKGAEKGGFKESHVNVGDEAIFST

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo06271	Spo06271	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo06271.1	Spo06271.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06271.1.utr5p.2	Spo06271.1.utr5p.2	five_prime_UTR
Spo06271.1.utr5p.1	Spo06271.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06271.1.CDS.6	Spo06271.1.CDS.6	CDS
Spo06271.1.CDS.5	Spo06271.1.CDS.5	CDS
Spo06271.1.CDS.4	Spo06271.1.CDS.4	CDS
Spo06271.1.CDS.3	Spo06271.1.CDS.3	CDS
Spo06271.1.CDS.2	Spo06271.1.CDS.2	CDS
Spo06271.1.CDS.1	Spo06271.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06271.1.utr3p.1	Spo06271.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06271.1.exon.7	Spo06271.1.exon.7	exon
Spo06271.1.exon.6	Spo06271.1.exon.6	exon
Spo06271.1.exon.5	Spo06271.1.exon.5	exon
Spo06271.1.exon.4	Spo06271.1.exon.4	exon
Spo06271.1.exon.3	Spo06271.1.exon.3	exon
Spo06271.1.exon.2	Spo06271.1.exon.2	exon
Spo06271.1.exon.1	Spo06271.1.exon.1	exon

Homology

[Close]

BLAST of Spo06271.1 vs. NCBI nr
Match: gi|902223241|gb|KNA19398.1| (hypothetical protein SOVF_061930 isoform A [Spinacia oleracea])

HSP 1 Score: 859.8 bits (2220), Expect = 2.200e-246
Identity = 455/456 (99.78%), Postives = 455/456 (99.78%), Query Frame = 1


		  
Query: 1   MIDKGMSSGSNKHLDAAAAA-AAAAAAAAKYEDVVSNRQLFMTTLENLHAAMSTKFMIPV 60
           MIDKGMSSGSNKHLDAAAAA AAAAAAAAKYEDVVSNRQLFMTTLENLHAAMSTKFMIPV
Sbjct: 1   MIDKGMSSGSNKHLDAAAAAAAAAAAAAAKYEDVVSNRQLFMTTLENLHAAMSTKFMIPV 60

Query: 61  IGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH 120
           IGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH
Sbjct: 61  IGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH 120

Query: 121 YERIYYFKSQDCPPGSGVLQSLNATPVAVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQ 180
           YERIYYFKSQDCPPGSGVLQSLNATPVAVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQ
Sbjct: 121 YERIYYFKSQDCPPGSGVLQSLNATPVAVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQ 180

Query: 181 APSGGYPIIGVIDGKFDSGYLVTVTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDST 240
           APSGGYPIIGVIDGKFDSGYLVTVTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDST
Sbjct: 181 APSGGYPIIGVIDGKFDSGYLVTVTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDST 240

Query: 241 RATSGVPRRRKRRKKSELRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIG 300
           RATSGVPRRRKRRKKSELRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIG
Sbjct: 241 RATSGVPRRRKRRKKSELRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIG 300

Query: 301 ELWNKLKDNEKAVYQAKAIKDKERYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMA 360
           ELWNKLKDNEKAVYQAKAIKDKERYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMA
Sbjct: 301 ELWNKLKDNEKAVYQAKAIKDKERYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMA 360

Query: 361 EVDGKDETERDSQESPENESDSSKSETDEDEDDDDEEFCDADTPPAPDNAGTSEASVAAG 420
           EVDGKDETERDSQESPENESDSSKSETDEDEDDDDEEFCDADTPPAPDNAGTSEASVAAG
Sbjct: 361 EVDGKDETERDSQESPENESDSSKSETDEDEDDDDEEFCDADTPPAPDNAGTSEASVAAG 420

Query: 421 AGTGTGTGEFEVVKGAEKGGFKESHVNVGDEAIFST 456
           AGTGTGTGEFEVVKGAEKGGFKESHVNVGDEAIFST
Sbjct: 421 AGTGTGTGEFEVVKGAEKGGFKESHVNVGDEAIFST 456

[Close]

BLAST of Spo06271.1 vs. NCBI nr
Match: gi|902223242|gb|KNA19399.1| (hypothetical protein SOVF_061930 isoform B [Spinacia oleracea])

HSP 1 Score: 850.9 bits (2197), Expect = 1.000e-243
Identity = 453/456 (99.34%), Postives = 453/456 (99.34%), Query Frame = 1


		  
Query: 1   MIDKGMSSGSNKHLDAAAAAAAAAAAAA-KYEDVVSNRQLFMTTLENLHAAMSTKFMIPV 60
           MIDKGMSSGSNKHLDAAAAAAAAAAAAA KYEDVVSNRQLFMTTLENLHAAMSTKFMIPV
Sbjct: 1   MIDKGMSSGSNKHLDAAAAAAAAAAAAAAKYEDVVSNRQLFMTTLENLHAAMSTKFMIPV 60

Query: 61  IGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH 120
           IGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH
Sbjct: 61  IGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH 120

Query: 121 YERIYYFKSQDCPPGSGVLQSLNATPVAVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQ 180
           YERIYYFKSQDCPPG  VLQSLNATPVAVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQ
Sbjct: 121 YERIYYFKSQDCPPG--VLQSLNATPVAVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQ 180

Query: 181 APSGGYPIIGVIDGKFDSGYLVTVTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDST 240
           APSGGYPIIGVIDGKFDSGYLVTVTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDST
Sbjct: 181 APSGGYPIIGVIDGKFDSGYLVTVTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDST 240

Query: 241 RATSGVPRRRKRRKKSELRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIG 300
           RATSGVPRRRKRRKKSELRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIG
Sbjct: 241 RATSGVPRRRKRRKKSELRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIG 300

Query: 301 ELWNKLKDNEKAVYQAKAIKDKERYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMA 360
           ELWNKLKDNEKAVYQAKAIKDKERYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMA
Sbjct: 301 ELWNKLKDNEKAVYQAKAIKDKERYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMA 360

Query: 361 EVDGKDETERDSQESPENESDSSKSETDEDEDDDDEEFCDADTPPAPDNAGTSEASVAAG 420
           EVDGKDETERDSQESPENESDSSKSETDEDEDDDDEEFCDADTPPAPDNAGTSEASVAAG
Sbjct: 361 EVDGKDETERDSQESPENESDSSKSETDEDEDDDDEEFCDADTPPAPDNAGTSEASVAAG 420

Query: 421 AGTGTGTGEFEVVKGAEKGGFKESHVNVGDEAIFST 456
           AGTGTGTGEFEVVKGAEKGGFKESHVNVGDEAIFST
Sbjct: 421 AGTGTGTGEFEVVKGAEKGGFKESHVNVGDEAIFST 454

[Close]

BLAST of Spo06271.1 vs. NCBI nr
Match: gi|731325257|ref|XP_010673418.1| (PREDICTED: high mobility group B protein 15 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 545.4 bits (1404), Expect = 9.200e-152
Identity = 325/474 (68.57%), Postives = 370/474 (78.06%), Query Frame = 1


		  
Query: 1   MIDKGMSSGSNKHLDAAAAAAAA-AAAAAKYEDVVSNRQLFMTTLENLHAAMSTKFMIPV 60
           M+D+G S     H+  A+A         AKYEDVV++RQLFMTTLE LHAAM++KFMIP+
Sbjct: 1   MVDQGRSL----HVGVASAIFNQYPPPLAKYEDVVASRQLFMTTLEKLHAAMASKFMIPI 60

Query: 61  IGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH 120
           IGGRDLDLHKLFVEVTSRGGI+KIL EKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH
Sbjct: 61  IGGRDLDLHKLFVEVTSRGGIEKILREKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH 120

Query: 121 YERIYYFKSQDCPPGS-GVLQSLNATPVAVH-GTAKMSPSPTPSHPANVQQNQINSTEFV 180
           YERIYYFK+QD    S GVLQ+ +ATPV++  G  KM P+P P+  ANVQQ ++N+ EFV
Sbjct: 121 YERIYYFKAQDQSAASAGVLQTPSATPVSIPPGFGKMPPTPAPAQVANVQQPRVNTIEFV 180

Query: 181 S---QAPSGGYPIIGVIDGKFDSGYLVTVTIGKDKLKGVLYQTPPAKMNQVA-QSSGVST 240
           S    A S G+P+IGVIDGKF+SGYLVTVT+GK+KLKGV+YQTPP K+NQV  Q+SGVST
Sbjct: 181 SGAHTATSVGFPVIGVIDGKFESGYLVTVTMGKEKLKGVMYQTPPVKINQVLPQTSGVST 240

Query: 241 VKTDSTRATSGVPRRRKRRKKSELRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDRE 300
            KTDS   TS + RRR+RRKKSE+RKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDRE
Sbjct: 241 GKTDSGPTTSSMHRRRRRRKKSEMRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDRE 300

Query: 301 ISRMIGELWNKLKDNEKAVYQAKAIKDKERYKTEMEDYKERLRTNQVISDAIPIQQRFPD 360
           ISRMIGELWNKLKD+EK VYQ KA KDKERY+ EMEDYKER + NQVISDAIPIQQRFPD
Sbjct: 301 ISRMIGELWNKLKDDEKVVYQEKAKKDKERYQMEMEDYKERQKVNQVISDAIPIQQRFPD 360

Query: 361 IDVEMAEVDGKDE-TERDSQESPENESDSSKSE-------TDEDEDD-----DDEEFCDA 420
           +DVEM EV+ K E TER++ E+P+NESDSSKSE        DEDEDD     DDE F DA
Sbjct: 361 VDVEMMEVNAKKEGTERNAPETPDNESDSSKSEESEEDEDEDEDEDDEMIEKDDENFSDA 420

Query: 421 DTPP----------APDNAGTSEASVAAGAGTGTGTGEFEVVKGAEK-GGFKES 444
           +T P             NAGT E S AA A    G  + EVVKG E+  G++ES
Sbjct: 421 ETSPLLVGLGGTTVESGNAGTFETSAAAAA--AVGEFQVEVVKGDEETTGYEES 468

[Close]

BLAST of Spo06271.1 vs. NCBI nr
Match: gi|147855747|emb|CAN83439.1| (hypothetical protein VITISV_021289 [Vitis vinifera])

HSP 1 Score: 441.0 bits (1133), Expect = 2.500e-120
Identity = 257/421 (61.05%), Postives = 308/421 (73.16%), Query Frame = 1


		  
Query: 28  AKYEDVVSNRQLFMTTLENLHAAMSTKFMIPVIGGRDLDLHKLFVEVTSRGGIDKILAEK 87
           AKYED+VS+ +LFM TLE LHA M TKFMIP+IGG++LDLH+LFVEVTSRGG++KI+ E+
Sbjct: 29  AKYEDIVSSPKLFMGTLEKLHAVMGTKFMIPIIGGKELDLHRLFVEVTSRGGLEKIIRER 88

Query: 88  RWKDVTATFNFPSTATNASFVLRKYYYSLLQHYERIYYFKSQDCPPGSG-VLQSLNATPV 147
           RWK+VTA F+FPSTATNASFVLRKYY SLL HYE+IY+FK+Q   P S    QS + TPV
Sbjct: 89  RWKEVTAVFSFPSTATNASFVLRKYYVSLLHHYEQIYFFKAQGWAPISADASQSPSITPV 148

Query: 148 AVHGTAK-MSPSPTPSHPANVQQNQINSTEF---VSQAPSGGYPIIGVIDGKFDSGYLVT 207
             HG A+ + PSP  S PA +QQ +I+S +     S A S   P+IGVIDGKF+SGYLVT
Sbjct: 149 PSHGLAEPVLPSPE-SQPAGIQQQRISSADIFPGASPASSTASPVIGVIDGKFESGYLVT 208

Query: 208 VTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDSTRATSGVPRRRKRRKKSELRKRDP 267
           VTIG +KLKGVLY+ P     QV Q   V T  T+ST A   V RRR RRKKSE++KRDP
Sbjct: 209 VTIGTEKLKGVLYEAPQTPARQVPQYFSVITNNTESTPAAPTVHRRR-RRKKSEIKKRDP 268

Query: 268 THPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKDNEKAVYQAKAIKDKE 327
            HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELW KLK+NEKAVYQ KA+KDKE
Sbjct: 269 AHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWTKLKENEKAVYQEKAVKDKE 328

Query: 328 RYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMAEVDGKDETE-RDSQESPENESDS 387
           RY+ EMEDY+ERL+  Q+ISDA+PIQQR P  DV+M E + K E E  +S ++PENES S
Sbjct: 329 RYRVEMEDYRERLKMGQIISDAVPIQQRLPHADVDMVEAEAKTEMEGGESPQTPENESSS 388

Query: 388 SKSETDEDEDDDDEEFCDADTPPAPD---NAGTSEASVAAGAGTGTGTGEFEVVKGAEKG 440
            K+++D+D+   ++EF D +T P        G     V  G  T      +E  K  EK 
Sbjct: 389 GKTDSDDDDKTAEKEF-DMETYPGVGVGVEGGECSNVVVVGMETSVEEETYESGKRVEKV 446

[Close]

BLAST of Spo06271.1 vs. NCBI nr
Match: gi|731390395|ref|XP_010650344.1| (PREDICTED: high mobility group B protein 15 isoform X1 [Vitis vinifera])

HSP 1 Score: 441.0 bits (1133), Expect = 2.500e-120
Identity = 257/421 (61.05%), Postives = 308/421 (73.16%), Query Frame = 1


		  
Query: 28  AKYEDVVSNRQLFMTTLENLHAAMSTKFMIPVIGGRDLDLHKLFVEVTSRGGIDKILAEK 87
           AKYED+VS+ +LFM TLE LHA M TKFMIP+IGG++LDLH+LFVEVTSRGG++KI+ E+
Sbjct: 51  AKYEDIVSSPKLFMGTLEKLHAVMGTKFMIPIIGGKELDLHRLFVEVTSRGGLEKIIRER 110

Query: 88  RWKDVTATFNFPSTATNASFVLRKYYYSLLQHYERIYYFKSQDCPPGSG-VLQSLNATPV 147
           RWK+VTA F+FPSTATNASFVLRKYY SLL HYE+IY+FK+Q   P S    QS + TPV
Sbjct: 111 RWKEVTAVFSFPSTATNASFVLRKYYVSLLHHYEQIYFFKAQGWAPISADASQSPSITPV 170

Query: 148 AVHGTAK-MSPSPTPSHPANVQQNQINSTEF---VSQAPSGGYPIIGVIDGKFDSGYLVT 207
             HG A+ + PSP  S PA +QQ +I+S +     S A S   P+IGVIDGKF+SGYLVT
Sbjct: 171 PSHGLAEPVLPSPE-SQPAGIQQQRISSADIFPGASPASSTASPVIGVIDGKFESGYLVT 230

Query: 208 VTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDSTRATSGVPRRRKRRKKSELRKRDP 267
           VTIG +KLKGVLY+ P     QV Q   V T  T+ST A   V RRR RRKKSE++KRDP
Sbjct: 231 VTIGTEKLKGVLYEAPQTPARQVPQYFSVITNNTESTPAAPTVHRRR-RRKKSEIKKRDP 290

Query: 268 THPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKDNEKAVYQAKAIKDKE 327
            HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELW KLK+NEKAVYQ KA+KDKE
Sbjct: 291 AHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWTKLKENEKAVYQEKAVKDKE 350

Query: 328 RYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMAEVDGKDETE-RDSQESPENESDS 387
           RY+ EMEDY+ERL+  Q+ISDA+PIQQR P  DV+M E + K E E  +S ++PENES S
Sbjct: 351 RYRVEMEDYRERLKMGQIISDAVPIQQRLPHADVDMVEAEAKTEMEGGESPQTPENESSS 410

Query: 388 SKSETDEDEDDDDEEFCDADTPPAPD---NAGTSEASVAAGAGTGTGTGEFEVVKGAEKG 440
            K+++D+D+   ++EF D +T P        G     V  G  T      +E  K  EK 
Sbjct: 411 GKTDSDDDDKTAEKEF-DMETYPGVGVGVEGGECSNVVVVGMETSVEEETYESGKRVEKV 468

[Close]

BLAST of Spo06271.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RIS5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_061930 PE=4 SV=1)

HSP 1 Score: 859.8 bits (2220), Expect = 1.500e-246
Identity = 455/456 (99.78%), Postives = 455/456 (99.78%), Query Frame = 1


		  
Query: 1   MIDKGMSSGSNKHLDAAAAA-AAAAAAAAKYEDVVSNRQLFMTTLENLHAAMSTKFMIPV 60
           MIDKGMSSGSNKHLDAAAAA AAAAAAAAKYEDVVSNRQLFMTTLENLHAAMSTKFMIPV
Sbjct: 1   MIDKGMSSGSNKHLDAAAAAAAAAAAAAAKYEDVVSNRQLFMTTLENLHAAMSTKFMIPV 60

Query: 61  IGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH 120
           IGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH
Sbjct: 61  IGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH 120

Query: 121 YERIYYFKSQDCPPGSGVLQSLNATPVAVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQ 180
           YERIYYFKSQDCPPGSGVLQSLNATPVAVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQ
Sbjct: 121 YERIYYFKSQDCPPGSGVLQSLNATPVAVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQ 180

Query: 181 APSGGYPIIGVIDGKFDSGYLVTVTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDST 240
           APSGGYPIIGVIDGKFDSGYLVTVTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDST
Sbjct: 181 APSGGYPIIGVIDGKFDSGYLVTVTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDST 240

Query: 241 RATSGVPRRRKRRKKSELRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIG 300
           RATSGVPRRRKRRKKSELRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIG
Sbjct: 241 RATSGVPRRRKRRKKSELRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIG 300

Query: 301 ELWNKLKDNEKAVYQAKAIKDKERYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMA 360
           ELWNKLKDNEKAVYQAKAIKDKERYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMA
Sbjct: 301 ELWNKLKDNEKAVYQAKAIKDKERYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMA 360

Query: 361 EVDGKDETERDSQESPENESDSSKSETDEDEDDDDEEFCDADTPPAPDNAGTSEASVAAG 420
           EVDGKDETERDSQESPENESDSSKSETDEDEDDDDEEFCDADTPPAPDNAGTSEASVAAG
Sbjct: 361 EVDGKDETERDSQESPENESDSSKSETDEDEDDDDEEFCDADTPPAPDNAGTSEASVAAG 420

Query: 421 AGTGTGTGEFEVVKGAEKGGFKESHVNVGDEAIFST 456
           AGTGTGTGEFEVVKGAEKGGFKESHVNVGDEAIFST
Sbjct: 421 AGTGTGTGEFEVVKGAEKGGFKESHVNVGDEAIFST 456

[Close]

BLAST of Spo06271.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKE8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_061930 PE=4 SV=1)

HSP 1 Score: 850.9 bits (2197), Expect = 7.200e-244
Identity = 453/456 (99.34%), Postives = 453/456 (99.34%), Query Frame = 1


		  
Query: 1   MIDKGMSSGSNKHLDAAAAAAAAAAAAA-KYEDVVSNRQLFMTTLENLHAAMSTKFMIPV 60
           MIDKGMSSGSNKHLDAAAAAAAAAAAAA KYEDVVSNRQLFMTTLENLHAAMSTKFMIPV
Sbjct: 1   MIDKGMSSGSNKHLDAAAAAAAAAAAAAAKYEDVVSNRQLFMTTLENLHAAMSTKFMIPV 60

Query: 61  IGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH 120
           IGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH
Sbjct: 61  IGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH 120

Query: 121 YERIYYFKSQDCPPGSGVLQSLNATPVAVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQ 180
           YERIYYFKSQDCPPG  VLQSLNATPVAVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQ
Sbjct: 121 YERIYYFKSQDCPPG--VLQSLNATPVAVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQ 180

Query: 181 APSGGYPIIGVIDGKFDSGYLVTVTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDST 240
           APSGGYPIIGVIDGKFDSGYLVTVTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDST
Sbjct: 181 APSGGYPIIGVIDGKFDSGYLVTVTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDST 240

Query: 241 RATSGVPRRRKRRKKSELRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIG 300
           RATSGVPRRRKRRKKSELRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIG
Sbjct: 241 RATSGVPRRRKRRKKSELRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIG 300

Query: 301 ELWNKLKDNEKAVYQAKAIKDKERYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMA 360
           ELWNKLKDNEKAVYQAKAIKDKERYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMA
Sbjct: 301 ELWNKLKDNEKAVYQAKAIKDKERYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMA 360

Query: 361 EVDGKDETERDSQESPENESDSSKSETDEDEDDDDEEFCDADTPPAPDNAGTSEASVAAG 420
           EVDGKDETERDSQESPENESDSSKSETDEDEDDDDEEFCDADTPPAPDNAGTSEASVAAG
Sbjct: 361 EVDGKDETERDSQESPENESDSSKSETDEDEDDDDEEFCDADTPPAPDNAGTSEASVAAG 420

Query: 421 AGTGTGTGEFEVVKGAEKGGFKESHVNVGDEAIFST 456
           AGTGTGTGEFEVVKGAEKGGFKESHVNVGDEAIFST
Sbjct: 421 AGTGTGTGEFEVVKGAEKGGFKESHVNVGDEAIFST 454

[Close]

BLAST of Spo06271.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CMU6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g065800 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 6.400e-152
Identity = 325/474 (68.57%), Postives = 370/474 (78.06%), Query Frame = 1


		  
Query: 1   MIDKGMSSGSNKHLDAAAAAAAA-AAAAAKYEDVVSNRQLFMTTLENLHAAMSTKFMIPV 60
           M+D+G S     H+  A+A         AKYEDVV++RQLFMTTLE LHAAM++KFMIP+
Sbjct: 1   MVDQGRSL----HVGVASAIFNQYPPPLAKYEDVVASRQLFMTTLEKLHAAMASKFMIPI 60

Query: 61  IGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH 120
           IGGRDLDLHKLFVEVTSRGGI+KIL EKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH
Sbjct: 61  IGGRDLDLHKLFVEVTSRGGIEKILREKRWKDVTATFNFPSTATNASFVLRKYYYSLLQH 120

Query: 121 YERIYYFKSQDCPPGS-GVLQSLNATPVAVH-GTAKMSPSPTPSHPANVQQNQINSTEFV 180
           YERIYYFK+QD    S GVLQ+ +ATPV++  G  KM P+P P+  ANVQQ ++N+ EFV
Sbjct: 121 YERIYYFKAQDQSAASAGVLQTPSATPVSIPPGFGKMPPTPAPAQVANVQQPRVNTIEFV 180

Query: 181 S---QAPSGGYPIIGVIDGKFDSGYLVTVTIGKDKLKGVLYQTPPAKMNQVA-QSSGVST 240
           S    A S G+P+IGVIDGKF+SGYLVTVT+GK+KLKGV+YQTPP K+NQV  Q+SGVST
Sbjct: 181 SGAHTATSVGFPVIGVIDGKFESGYLVTVTMGKEKLKGVMYQTPPVKINQVLPQTSGVST 240

Query: 241 VKTDSTRATSGVPRRRKRRKKSELRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDRE 300
            KTDS   TS + RRR+RRKKSE+RKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDRE
Sbjct: 241 GKTDSGPTTSSMHRRRRRRKKSEMRKRDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDRE 300

Query: 301 ISRMIGELWNKLKDNEKAVYQAKAIKDKERYKTEMEDYKERLRTNQVISDAIPIQQRFPD 360
           ISRMIGELWNKLKD+EK VYQ KA KDKERY+ EMEDYKER + NQVISDAIPIQQRFPD
Sbjct: 301 ISRMIGELWNKLKDDEKVVYQEKAKKDKERYQMEMEDYKERQKVNQVISDAIPIQQRFPD 360

Query: 361 IDVEMAEVDGKDE-TERDSQESPENESDSSKSE-------TDEDEDD-----DDEEFCDA 420
           +DVEM EV+ K E TER++ E+P+NESDSSKSE        DEDEDD     DDE F DA
Sbjct: 361 VDVEMMEVNAKKEGTERNAPETPDNESDSSKSEESEEDEDEDEDEDDEMIEKDDENFSDA 420

Query: 421 DTPP----------APDNAGTSEASVAAGAGTGTGTGEFEVVKGAEK-GGFKES 444
           +T P             NAGT E S AA A    G  + EVVKG E+  G++ES
Sbjct: 421 ETSPLLVGLGGTTVESGNAGTFETSAAAAA--AVGEFQVEVVKGDEETTGYEES 468

[Close]

BLAST of Spo06271.1 vs. UniProtKB/TrEMBL
Match: F6GWG2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0029g00130 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 1.700e-120
Identity = 257/421 (61.05%), Postives = 308/421 (73.16%), Query Frame = 1


		  
Query: 28  AKYEDVVSNRQLFMTTLENLHAAMSTKFMIPVIGGRDLDLHKLFVEVTSRGGIDKILAEK 87
           AKYED+VS+ +LFM TLE LHA M TKFMIP+IGG++LDLH+LFVEVTSRGG++KI+ E+
Sbjct: 50  AKYEDIVSSPKLFMGTLEKLHAVMGTKFMIPIIGGKELDLHRLFVEVTSRGGLEKIIRER 109

Query: 88  RWKDVTATFNFPSTATNASFVLRKYYYSLLQHYERIYYFKSQDCPPGSG-VLQSLNATPV 147
           RWK+VTA F+FPSTATNASFVLRKYY SLL HYE+IY+FK+Q   P S    QS + TPV
Sbjct: 110 RWKEVTAVFSFPSTATNASFVLRKYYVSLLHHYEQIYFFKAQGWAPISADASQSPSITPV 169

Query: 148 AVHGTAK-MSPSPTPSHPANVQQNQINSTEF---VSQAPSGGYPIIGVIDGKFDSGYLVT 207
             HG A+ + PSP  S PA +QQ +I+S +     S A S   P+IGVIDGKF+SGYLVT
Sbjct: 170 PSHGLAEPVLPSPE-SQPAGIQQQRISSADIFPGASPASSTASPVIGVIDGKFESGYLVT 229

Query: 208 VTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDSTRATSGVPRRRKRRKKSELRKRDP 267
           VTIG +KLKGVLY+ P     QV Q   V T  T+ST A   V RRR RRKKSE++KRDP
Sbjct: 230 VTIGTEKLKGVLYEAPQTPARQVPQYFSVITNNTESTPAAPTVHRRR-RRKKSEIKKRDP 289

Query: 268 THPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKDNEKAVYQAKAIKDKE 327
            HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELW KLK+NEKAVYQ KA+KDKE
Sbjct: 290 AHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWTKLKENEKAVYQEKAVKDKE 349

Query: 328 RYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMAEVDGKDETE-RDSQESPENESDS 387
           RY+ EMEDY+ERL+  Q+ISDA+PIQQR P  DV+M E + K E E  +S ++PENES S
Sbjct: 350 RYRVEMEDYRERLKMGQIISDAVPIQQRLPHADVDMVEAEAKTEMEGGESPQTPENESSS 409

Query: 388 SKSETDEDEDDDDEEFCDADTPPAPD---NAGTSEASVAAGAGTGTGTGEFEVVKGAEKG 440
            K+++D+D+   ++EF D +T P        G     V  G  T      +E  K  EK 
Sbjct: 410 GKTDSDDDDKTAEKEF-DMETYPGVGVGVEGGECSNVVVVGMETSVEEETYESGKRVEKV 467

[Close]

BLAST of Spo06271.1 vs. UniProtKB/TrEMBL
Match: A5BNN4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021289 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 1.700e-120
Identity = 257/421 (61.05%), Postives = 308/421 (73.16%), Query Frame = 1


		  
Query: 28  AKYEDVVSNRQLFMTTLENLHAAMSTKFMIPVIGGRDLDLHKLFVEVTSRGGIDKILAEK 87
           AKYED+VS+ +LFM TLE LHA M TKFMIP+IGG++LDLH+LFVEVTSRGG++KI+ E+
Sbjct: 29  AKYEDIVSSPKLFMGTLEKLHAVMGTKFMIPIIGGKELDLHRLFVEVTSRGGLEKIIRER 88

Query: 88  RWKDVTATFNFPSTATNASFVLRKYYYSLLQHYERIYYFKSQDCPPGSG-VLQSLNATPV 147
           RWK+VTA F+FPSTATNASFVLRKYY SLL HYE+IY+FK+Q   P S    QS + TPV
Sbjct: 89  RWKEVTAVFSFPSTATNASFVLRKYYVSLLHHYEQIYFFKAQGWAPISADASQSPSITPV 148

Query: 148 AVHGTAK-MSPSPTPSHPANVQQNQINSTEF---VSQAPSGGYPIIGVIDGKFDSGYLVT 207
             HG A+ + PSP  S PA +QQ +I+S +     S A S   P+IGVIDGKF+SGYLVT
Sbjct: 149 PSHGLAEPVLPSPE-SQPAGIQQQRISSADIFPGASPASSTASPVIGVIDGKFESGYLVT 208

Query: 208 VTIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDSTRATSGVPRRRKRRKKSELRKRDP 267
           VTIG +KLKGVLY+ P     QV Q   V T  T+ST A   V RRR RRKKSE++KRDP
Sbjct: 209 VTIGTEKLKGVLYEAPQTPARQVPQYFSVITNNTESTPAAPTVHRRR-RRKKSEIKKRDP 268

Query: 268 THPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKDNEKAVYQAKAIKDKE 327
            HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELW KLK+NEKAVYQ KA+KDKE
Sbjct: 269 AHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWTKLKENEKAVYQEKAVKDKE 328

Query: 328 RYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMAEVDGKDETE-RDSQESPENESDS 387
           RY+ EMEDY+ERL+  Q+ISDA+PIQQR P  DV+M E + K E E  +S ++PENES S
Sbjct: 329 RYRVEMEDYRERLKMGQIISDAVPIQQRLPHADVDMVEAEAKTEMEGGESPQTPENESSS 388

Query: 388 SKSETDEDEDDDDEEFCDADTPPAPD---NAGTSEASVAAGAGTGTGTGEFEVVKGAEKG 440
            K+++D+D+   ++EF D +T P        G     V  G  T      +E  K  EK 
Sbjct: 389 GKTDSDDDDKTAEKEF-DMETYPGVGVGVEGGECSNVVVVGMETSVEEETYESGKRVEKV 446

[Close]

BLAST of Spo06271.1 vs. ExPASy Swiss-Prot
Match: HMG15_ARATH (High mobility group B protein 15 OS=Arabidopsis thaliana GN=HMGB15 PE=2 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 2.300e-102
Identity = 224/421 (53.21%), Postives = 289/421 (68.65%), Query Frame = 1


		  
Query: 28  AKYEDVVSNRQLFMTTLENLHAAMSTKFMIPVIGGRDLDLHKLFVEVTSRGGIDKILAEK 87
           A YE VV++ +LFMT+LE LH+ + TKFM+P+IGGRDLDLHKLFVEVTSRGGI+KIL E+
Sbjct: 23  ATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILNER 82

Query: 88  RWKDVTATFNFPSTATNASFVLRKYYYSLLQHYERIYYFKSQ-DCPPGSGVLQSLNATPV 147
           RWK+VTATF FP TATNAS+VLRKYY+SLL +YE+IY+F+S    PP S  +QS +A P 
Sbjct: 83  RWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIPPDS--MQSPSARPC 142

Query: 148 AVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQAPSGGYPIIGVIDGKFDSGYLVTVTIG 207
            + G  +  PS          Q +IN+ EF+  + +G   ++GVIDGKF+SGYLVTVTIG
Sbjct: 143 FIQGAIR--PSQELQALTFTPQPKINTAEFLGGSLAGSN-VVGVIDGKFESGYLVTVTIG 202

Query: 208 KDKLKGVLYQTPP---AKMNQVAQSSGVS----TVKTDSTRATSGVPRRRKRRKKSELRK 267
            ++LKGVLYQ  P          QS GV      +  +      GV +RR+RRKKSE+++
Sbjct: 203 SEQLKGVLYQLLPQNTVSYQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRRRKKSEIKR 262

Query: 268 RDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKDNEKAVYQAKAIK 327
           RDP HPKPNRSGYNFFFAEQHARLKPLHPGKDR+ISRMIGELWNKL ++EK +YQ KA++
Sbjct: 263 RDPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKLIYQGKAME 322

Query: 328 DKERYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMAEVD-GKDETERDSQESPENE 387
           DKERY+TEMEDY+E+ +  Q+IS+A+P+QQR P+ +V+MAE D   DE E D +E   + 
Sbjct: 323 DKERYRTEMEDYREKKKNGQLISNAVPLQQRLPEQNVDMAEADLPIDEVEEDDEEGDSSG 382

Query: 388 SDSSKSETDEDEDDDDEEFCDAD-TPPAPD-NAGTSEASVAAGAGTGTGTGEFEVVKGAE 438
           S       D+   + D E  +    P  P+ N   +E  VA     G    E   +K A+
Sbjct: 383 SSGESEPHDDQSIETDPELEEPSLNPSGPNLNPNPTEIVVAPKEKNGDVVMETSPLKKAD 438

[Close]

BLAST of Spo06271.1 vs. ExPASy Swiss-Prot
Match: HMGB9_ARATH (High mobility group B protein 9 OS=Arabidopsis thaliana GN=HMGB9 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.000e-62
Identity = 136/313 (43.45%), Postives = 190/313 (60.70%), Query Frame = 1


		  
Query: 28  AKYEDVVSNRQLFMTTLENLHAAMSTKFMIPVIGGRDLDLHKLFVEVTSRGGIDKILAEK 87
           A +E VV +  +F  TL   H+ MSTKFMIPVIGG++LDLH L+VEVT RGG +K++ EK
Sbjct: 32  ALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEKVVVEK 91

Query: 88  RWKDVTATFNFPSTATNASFVLRKYYYSLLQHYERIYYFKSQDCPPGSGVLQSLNATPVA 147
           +W++V   F F +T T+ASFVLRK+Y +LL HYE+++ F ++   P    + + +A P  
Sbjct: 92  KWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARG--PLLHPIATFHANPST 151

Query: 148 VHGTAKMSPSPTPSHPANVQQNQINSTEFVSQAPSGGYPIIGVIDGKFDSGYLVTVTIGK 207
               A +  +P      N       S+ F +         IG I+GKFD GYLV V +G 
Sbjct: 152 SKEMALVEYTPPSIRYHNTHPPSQGSSSFTA---------IGTIEGKFDCGYLVKVKLGS 211

Query: 208 DKLKGVLYQT----PPAKMNQVAQSSGVSTVKTDSTRATSGVPRRRKRRKKSELRKRDPT 267
           + L GVLY +    P +    V  ++ V  V+T   R   G  RR +RR+       DP 
Sbjct: 212 EILNGVLYHSAQPGPSSSPTAVLNNAVVPYVETGRRRRRLGKRRRSRRRE-------DPN 271

Query: 268 HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKDNEKAVYQAKAIKDKER 327
           +PKPNRSGYNFFFAE+H +LK L+P K+RE +++IGE W+ L   E+ VYQ   +KDKER
Sbjct: 272 YPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKER 326

Query: 328 YKTEMEDYKERLR 337
           Y+ E+ +Y+E LR
Sbjct: 332 YQRELNEYRETLR 326

[Close]

BLAST of Spo06271.1 vs. ExPASy Swiss-Prot
Match: HMG10_ARATH (High mobility group B protein 10 OS=Arabidopsis thaliana GN=HMGB10 PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.400e-59
Identity = 133/309 (43.04%), Postives = 181/309 (58.58%), Query Frame = 1


		  
Query: 24  AAAAAKYEDVVSNRQLFMTTLENLHAAMSTKFMIPVIGGRDLDLHKLFVEVTSRGGIDKI 83
           ++  AKY+D+V N  LF   L       S    +P +GG  LDLH+LF+EVTSRGGI+++
Sbjct: 30  SSVPAKYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERV 89

Query: 84  LAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQHYERIYYFKSQDCPPGSGVLQSLNA 143
           + +++WK+V   F+FP+T T+ASFVLRKYY   L   E +YY +          + SL +
Sbjct: 90  VKDRKWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEKP--------VSSLQS 149

Query: 144 TPVAVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQAPSGGYPIIGVIDGKFDSGYLVTV 203
           T  A+   A  SP+P                E     P  GY + G IDGKFDSGYLVT+
Sbjct: 150 TDEALKSLANESPNP----------------EEGIDEPQVGYEVQGFIDGKFDSGYLVTM 209

Query: 204 TIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDSTRATSGVPRRRKRRKKSELRKRDPT 263
            +G  +LKGVLY  P         S    T++T S    S    +R+ RKKS+L   D  
Sbjct: 210 KLGSQELKGVLYHIPQ------TPSQSQQTMETPSAIVQSS---QRRHRKKSKLAVVDTQ 269

Query: 264 HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKDNEKAVYQAKAIKDKER 323
            PK +RSGYNFFFAEQ+ARLKP + G++R I++ IG +W+ L ++EK VYQ K +KD ER
Sbjct: 270 KPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVER 305

Query: 324 YKTEMEDYK 333
           Y+ EM +YK
Sbjct: 330 YRIEMLEYK 305

[Close]

BLAST of Spo06271.1 vs. ExPASy Swiss-Prot
Match: HMG11_ARATH (Putative high mobility group B protein 11 OS=Arabidopsis thaliana GN=HMGB11 PE=3 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 1.200e-39
Identity = 112/361 (31.02%), Postives = 180/361 (49.86%), Query Frame = 1


		  
Query: 30  YEDVVSNRQLFMTTLENLHAAMSTKFMIPVIGGRDLDLHKLFVEVTSRGGIDKILAEKRW 89
           Y+D+V N +LF   L + H +   KF IP++GG+ LDLH+LF EVTSRGG++K++ ++R 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 90  KDVTATFNFPSTATNASFVLRKYYYSLLQHYERIYYFKSQDCPPGSGVLQSLNATPVAVH 149
           K+V   FNF +T TN++FVLRK Y  +L  +E +YYF++    P S   +   A  + + 
Sbjct: 90  KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQA----PLSTFWEKEKALKLLIE 149

Query: 150 GTAKMSPSPTPSHPANVQQNQINSTEFVSQAPSGGYPIIGVIDGKFDSGYLVTVTIGKDK 209
            +A                         SQ    G  I G+IDGKF+SGYL++  +G +K
Sbjct: 150 KSANRDKD--------------------SQELKPGTVITGIIDGKFESGYLISTKVGSEK 209

Query: 210 LKGVLYQTPPAKMNQVAQSSGVSTVKTDSTRATSGVPRRRKRRKKSELRKRDPTHPKPNR 269
           LKG+LY   P                           R +K+ K S+     P  PK  R
Sbjct: 210 LKGMLYHISPE------------------------TKRGKKKAKSSQGDSHKP--PKRQR 269

Query: 270 SGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKDNEKAVYQAKAIKDKERYKTEME 329
           +GYNFF AEQ  R+K  + G+     +  G +W  L ++++ VY  K+ +D +RYK E+ 
Sbjct: 270 TGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRYKMEIL 329

Query: 330 DYKERLRTNQVISDAIPIQQRFPDIDVEMAEVDGKDETERDSQESPENESDSSKSETDED 389
            Y+  + +   +++ +       D     +  +  DE  +++    +  + +S +   ED
Sbjct: 330 QYRSLMESR--VAEIVAA----TDAGTSASAAETADEASQENLAKTDACTSASSAAETED 334

Query: 390 E 391
           E
Sbjct: 390 E 334

[Close]

BLAST of Spo06271.1 vs. ExPASy Swiss-Prot
Match: ARID2_HUMAN (AT-rich interactive domain-containing protein 2 OS=Homo sapiens GN=ARID2 PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 3.700e-15
Identity = 37/99 (37.37%), Postives = 61/99 (61.62%), Query Frame = 1


		  
Query: 40  FMTTLENLHAAMSTKFM-IPVIGGRDLDLHKLFVEVTSRGGIDKILAEKRWKDVTATFNF 99
           F+  L   H +  + F  IP +GG++LDLH L+  VT+ GG  K+  + +W ++   FNF
Sbjct: 19  FLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNF 78

Query: 100 PSTATNASFVLRKYYYSLLQHYERIYYFKSQD--CPPGS 136
           P + +NA+F L++YY   L+ YE++++F   D   PPG+
Sbjct: 79  PRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGN 117

[Close]

BLAST of Spo06271.1 vs. TAIR (Arabidopsis)
Match: AT1G04880.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain)

HSP 1 Score: 374.0 bits (959), Expect = 1.300e-103
Identity = 224/421 (53.21%), Postives = 289/421 (68.65%), Query Frame = 1


		  
Query: 28  AKYEDVVSNRQLFMTTLENLHAAMSTKFMIPVIGGRDLDLHKLFVEVTSRGGIDKILAEK 87
           A YE VV++ +LFMT+LE LH+ + TKFM+P+IGGRDLDLHKLFVEVTSRGGI+KIL E+
Sbjct: 23  ATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILNER 82

Query: 88  RWKDVTATFNFPSTATNASFVLRKYYYSLLQHYERIYYFKSQ-DCPPGSGVLQSLNATPV 147
           RWK+VTATF FP TATNAS+VLRKYY+SLL +YE+IY+F+S    PP S  +QS +A P 
Sbjct: 83  RWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIPPDS--MQSPSARPC 142

Query: 148 AVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQAPSGGYPIIGVIDGKFDSGYLVTVTIG 207
            + G  +  PS          Q +IN+ EF+  + +G   ++GVIDGKF+SGYLVTVTIG
Sbjct: 143 FIQGAIR--PSQELQALTFTPQPKINTAEFLGGSLAGSN-VVGVIDGKFESGYLVTVTIG 202

Query: 208 KDKLKGVLYQTPP---AKMNQVAQSSGVS----TVKTDSTRATSGVPRRRKRRKKSELRK 267
            ++LKGVLYQ  P          QS GV      +  +      GV +RR+RRKKSE+++
Sbjct: 203 SEQLKGVLYQLLPQNTVSYQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRRRKKSEIKR 262

Query: 268 RDPTHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKDNEKAVYQAKAIK 327
           RDP HPKPNRSGYNFFFAEQHARLKPLHPGKDR+ISRMIGELWNKL ++EK +YQ KA++
Sbjct: 263 RDPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKLIYQGKAME 322

Query: 328 DKERYKTEMEDYKERLRTNQVISDAIPIQQRFPDIDVEMAEVD-GKDETERDSQESPENE 387
           DKERY+TEMEDY+E+ +  Q+IS+A+P+QQR P+ +V+MAE D   DE E D +E   + 
Sbjct: 323 DKERYRTEMEDYREKKKNGQLISNAVPLQQRLPEQNVDMAEADLPIDEVEEDDEEGDSSG 382

Query: 388 SDSSKSETDEDEDDDDEEFCDAD-TPPAPD-NAGTSEASVAAGAGTGTGTGEFEVVKGAE 438
           S       D+   + D E  +    P  P+ N   +E  VA     G    E   +K A+
Sbjct: 383 SSGESEPHDDQSIETDPELEEPSLNPSGPNLNPNPTEIVVAPKEKNGDVVMETSPLKKAD 438

[Close]

BLAST of Spo06271.1 vs. TAIR (Arabidopsis)
Match: AT1G76110.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain)

HSP 1 Score: 240.4 bits (612), Expect = 2.200e-63
Identity = 136/313 (43.45%), Postives = 190/313 (60.70%), Query Frame = 1


		  
Query: 28  AKYEDVVSNRQLFMTTLENLHAAMSTKFMIPVIGGRDLDLHKLFVEVTSRGGIDKILAEK 87
           A +E VV +  +F  TL   H+ MSTKFMIPVIGG++LDLH L+VEVT RGG +K++ EK
Sbjct: 32  ALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEKVVVEK 91

Query: 88  RWKDVTATFNFPSTATNASFVLRKYYYSLLQHYERIYYFKSQDCPPGSGVLQSLNATPVA 147
           +W++V   F F +T T+ASFVLRK+Y +LL HYE+++ F ++   P    + + +A P  
Sbjct: 92  KWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARG--PLLHPIATFHANPST 151

Query: 148 VHGTAKMSPSPTPSHPANVQQNQINSTEFVSQAPSGGYPIIGVIDGKFDSGYLVTVTIGK 207
               A +  +P      N       S+ F +         IG I+GKFD GYLV V +G 
Sbjct: 152 SKEMALVEYTPPSIRYHNTHPPSQGSSSFTA---------IGTIEGKFDCGYLVKVKLGS 211

Query: 208 DKLKGVLYQT----PPAKMNQVAQSSGVSTVKTDSTRATSGVPRRRKRRKKSELRKRDPT 267
           + L GVLY +    P +    V  ++ V  V+T   R   G  RR +RR+       DP 
Sbjct: 212 EILNGVLYHSAQPGPSSSPTAVLNNAVVPYVETGRRRRRLGKRRRSRRRE-------DPN 271

Query: 268 HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKDNEKAVYQAKAIKDKER 327
           +PKPNRSGYNFFFAE+H +LK L+P K+RE +++IGE W+ L   E+ VYQ   +KDKER
Sbjct: 272 YPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKER 326

Query: 328 YKTEMEDYKERLR 337
           Y+ E+ +Y+E LR
Sbjct: 332 YQRELNEYRETLR 326

[Close]

BLAST of Spo06271.1 vs. TAIR (Arabidopsis)
Match: AT3G13350.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain)

HSP 1 Score: 231.1 bits (588), Expect = 1.400e-60
Identity = 133/309 (43.04%), Postives = 181/309 (58.58%), Query Frame = 1


		  
Query: 24  AAAAAKYEDVVSNRQLFMTTLENLHAAMSTKFMIPVIGGRDLDLHKLFVEVTSRGGIDKI 83
           ++  AKY+D+V N  LF   L       S    +P +GG  LDLH+LF+EVTSRGGI+++
Sbjct: 30  SSVPAKYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERV 89

Query: 84  LAEKRWKDVTATFNFPSTATNASFVLRKYYYSLLQHYERIYYFKSQDCPPGSGVLQSLNA 143
           + +++WK+V   F+FP+T T+ASFVLRKYY   L   E +YY +          + SL +
Sbjct: 90  VKDRKWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEKP--------VSSLQS 149

Query: 144 TPVAVHGTAKMSPSPTPSHPANVQQNQINSTEFVSQAPSGGYPIIGVIDGKFDSGYLVTV 203
           T  A+   A  SP+P                E     P  GY + G IDGKFDSGYLVT+
Sbjct: 150 TDEALKSLANESPNP----------------EEGIDEPQVGYEVQGFIDGKFDSGYLVTM 209

Query: 204 TIGKDKLKGVLYQTPPAKMNQVAQSSGVSTVKTDSTRATSGVPRRRKRRKKSELRKRDPT 263
            +G  +LKGVLY  P         S    T++T S    S    +R+ RKKS+L   D  
Sbjct: 210 KLGSQELKGVLYHIPQ------TPSQSQQTMETPSAIVQSS---QRRHRKKSKLAVVDTQ 269

Query: 264 HPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKDNEKAVYQAKAIKDKER 323
            PK +RSGYNFFFAEQ+ARLKP + G++R I++ IG +W+ L ++EK VYQ K +KD ER
Sbjct: 270 KPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVER 305

Query: 324 YKTEMEDYK 333
           Y+ EM +YK
Sbjct: 330 YRIEMLEYK 305

[Close]

BLAST of Spo06271.1 vs. TAIR (Arabidopsis)
Match: AT1G55650.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain)

HSP 1 Score: 165.6 bits (418), Expect = 7.000e-41
Identity = 112/361 (31.02%), Postives = 180/361 (49.86%), Query Frame = 1


		  
Query: 30  YEDVVSNRQLFMTTLENLHAAMSTKFMIPVIGGRDLDLHKLFVEVTSRGGIDKILAEKRW 89
           Y+D+V N +LF   L + H +   KF IP++GG+ LDLH+LF EVTSRGG++K++ ++R 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 90  KDVTATFNFPSTATNASFVLRKYYYSLLQHYERIYYFKSQDCPPGSGVLQSLNATPVAVH 149
           K+V   FNF +T TN++FVLRK Y  +L  +E +YYF++    P S   +   A  + + 
Sbjct: 90  KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQA----PLSTFWEKEKALKLLIE 149

Query: 150 GTAKMSPSPTPSHPANVQQNQINSTEFVSQAPSGGYPIIGVIDGKFDSGYLVTVTIGKDK 209
            +A                         SQ    G  I G+IDGKF+SGYL++  +G +K
Sbjct: 150 KSANRDKD--------------------SQELKPGTVITGIIDGKFESGYLISTKVGSEK 209

Query: 210 LKGVLYQTPPAKMNQVAQSSGVSTVKTDSTRATSGVPRRRKRRKKSELRKRDPTHPKPNR 269
           LKG+LY   P                           R +K+ K S+     P  PK  R
Sbjct: 210 LKGMLYHISPE------------------------TKRGKKKAKSSQGDSHKP--PKRQR 269

Query: 270 SGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLKDNEKAVYQAKAIKDKERYKTEME 329
           +GYNFF AEQ  R+K  + G+     +  G +W  L ++++ VY  K+ +D +RYK E+ 
Sbjct: 270 TGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRYKMEIL 329

Query: 330 DYKERLRTNQVISDAIPIQQRFPDIDVEMAEVDGKDETERDSQESPENESDSSKSETDED 389
            Y+  + +   +++ +       D     +  +  DE  +++    +  + +S +   ED
Sbjct: 330 QYRSLMESR--VAEIVAA----TDAGTSASAAETADEASQENLAKTDACTSASSAAETED 334

Query: 390 E 391
           E
Sbjct: 390 E 334

[Close]

BLAST of Spo06271.1 vs. TAIR (Arabidopsis)
Match: AT3G28730.1 (high mobility group)

HSP 1 Score: 61.2 bits (147), Expect = 1.900e-9
Identity = 40/124 (32.26%), Postives = 65/124 (52.42%), Query Frame = 1


		  
Query: 226 AQSSGVSTVKTDSTR--------ATSGVPRRRKR--------RKKSELRKRDPTHPKPNR 285
           A   GV  +K  S +        ++ G+P +RK         ++K   +K+DP  PK   
Sbjct: 507 ASEGGVGEIKEKSIKKEPKKEASSSKGLPPKRKTVAADEGSSKRKKPKKKKDPNAPKRAM 566

Query: 286 SGYNFFFAEQHARLKPLHPG-KDREISRMIGELWNKLKDNEKAVYQAKAIKDKERYKTEM 333
           SG+ FF   +   +K  HPG    E+ +++G+ W ++  ++K  Y+AKA  DK+RYK E+
Sbjct: 567 SGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRYKDEI 626

The following BLAST results are available for this feature:

BLAST of Spo06271.1 vs. NCBI nr
BLAST of Spo06271.1 vs. UniProtKB/TrEMBL
BLAST of Spo06271.1 vs. ExPASy Swiss-Prot
BLAST of Spo06271.1 vs. TAIR (Arabidopsis)

BLAST of Spo06271.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902223241\|gb\|KNA19398.1\|	2.2e-246	99.7	hypothetical protein SOVF_0619...	[more]
gi\|902223242\|gb\|KNA19399.1\|	1.0e-243	99.3	hypothetical protein SOVF_0619...	[more]
gi\|731325257\|ref\|XP_010673418.1\|	9.2e-152	68.5	PREDICTED: high mobility group...	[more]
gi\|147855747\|emb\|CAN83439.1\|	2.5e-120	61.0	hypothetical protein VITISV_02...	[more]
gi\|731390395\|ref\|XP_010650344.1\|	2.5e-120	61.0	PREDICTED: high mobility group...	[more]

BLAST of Spo06271.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RIS5_SPIOL	1.5e-246	99.7	Uncharacterized protein OS=Spi...	[more]
A0A0K9RKE8_SPIOL	7.2e-244	99.3	Uncharacterized protein OS=Spi...	[more]
A0A0J8CMU6_BETVU	6.4e-152	68.5	Uncharacterized protein OS=Bet...	[more]
F6GWG2_VITVI	1.7e-120	61.0	Putative uncharacterized prote...	[more]
A5BNN4_VITVI	1.7e-120	61.0	Putative uncharacterized prote...	[more]

BLAST of Spo06271.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
HMG15_ARATH	2.3e-102	53.2	High mobility group B protein ...	[more]
HMGB9_ARATH	4.0e-62	43.4	High mobility group B protein ...	[more]
HMG10_ARATH	2.4e-59	43.0	High mobility group B protein ...	[more]
HMG11_ARATH	1.2e-39	31.0	Putative high mobility group B...	[more]
ARID2_HUMAN	3.7e-15	37.3	AT-rich interactive domain-con...	[more]

BLAST of Spo06271.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G04880.1	1.3e-103	53.2	HMG (high mobility group) box ...	[more]
AT1G76110.1	2.2e-63	43.4	HMG (high mobility group) box ...	[more]
AT3G13350.1	1.4e-60	43.0	HMG (high mobility group) box ...	[more]
AT1G55650.1	7.0e-41	31.0	HMG (high mobility group) box ...	[more]
AT3G28730.1	1.9e-9	32.2	high mobility group	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001606	ARID DNA-binding domain	GENE3D	1.10.150.60		coord: 33..131 score: 3.2
IPR001606	ARID DNA-binding domain	PFAM	PF01388	ARID	coord: 37..121 score: 8.7
IPR001606	ARID DNA-binding domain	SMART	SM00501	bright_3	coord: 35..126 score: 1.3
IPR001606	ARID DNA-binding domain	PROFILE	PS51011	ARID	coord: 34..125 score: 25
IPR001606	ARID DNA-binding domain	unknown	SSF46774	ARID-like	coord: 33..133 score: 1.16
IPR009071	High mobility group box domain	GENE3D	1.10.30.10		coord: 259..341 score: 5.2
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 265..332 score: 1.9
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 264..333 score: 1.5
IPR009071	High mobility group box domain	PROFILE	PS50118	HMG_BOX_2	coord: 265..332 score: 15
IPR009071	High mobility group box domain	unknown	SSF47095	HMG-box	coord: 257..337 score: 7.46
None	No IPR available	unknown	Coil	Coil	coord: 314..334 scor
None	No IPR available	PANTHER	PTHR13711	SWI/SNF-RELATED CHROMATIN BINDING PROTEIN	coord: 245..360 score: 1.2E-111coord: 386..403 score: 1.2E-111coord: 5..213 score: 1.2E
None	No IPR available	PANTHER	PTHR13711:SF213	PROTEIN HMG-20	coord: 245..360 score: 1.2E-111coord: 5..213 score: 1.2E-111coord: 386..403 score: 1.2E
None	No IPR available	SMART	SM01014	ARID_2	coord: 31..121 score: 3.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003677	DNA binding