Spo05684.1 (mRNA) | SpinachBase

Overview


Name	Spo05684.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Rubredoxin family protein
Location	chr5 : 14341890 .. 14343781 (-)
Sequence length	1489

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGGATCTTTCTAGGCTCCTATAGAAGATAAGAAAAGCACAAAAAAGAGATGAGAGCGTGTGGGAAGTGAGGATGCCACGCTTTCAAGTTTCAATTCCAAACACAAACCAAATCCCACTTGCAATTTCCCTTACAATTTTCACCATTTGCCTCCACTCCATCAACAACCTCCCCTTATCTTCTAGGAAGCTTAAATCCGAAATCCAAAACCCCATTATTAACGATTATTGTTGCATTAACAAAGGATCATGGCAATGACAGTACAGTTGCAGCAGCAAGCAGCTACAACTGCAGCTACTGCAAGCAAGTCATGGAGTATACCTTCAGCACTGGTGCCTCCTGCAGGTACCAGCATCGGCCTCAGGCGTGCTGCTGATCGCTTCGCACTGCGATCATCTTTCTCGTCTTCCTCCCTCCGTCTTCCAAGTGTCAATGTTACTGCTGCCCCTAAATTCTCTATGCGTGTTGCATCCAAACAGGCCTACATCTGCCGTGATTGTGGGTCAGTCACTCACTCACTAGCTCTTTCTGTTTCACTATGCAATCCTGTTTTTATTTCTTGCATTAATGGCTGAACTGAACTGATTGTCATCCAGATATATTTACAACGATCCTCGGAAACCTTTCGAGAAATTACCAGACAATTTCTTCTGTGCTGGTAAGTCAGATCCCCCCATCAGTTTCATAACAATAAATCACTAATTGCATATTAGAAAATTAATGTTGCAAGAAGCAGGAAGTAGACTGGTTATGTTGGAAAATTTTCGGAGATTTAAATTGGAAATTTGGAAGTTGAACAGATTAAATATACTACACAGCAAACTAGGATGAATACCATAATTGAAAACCTGTGCAGTATGCGGTGCTCCAAAGCGCAGATTCAGGCCATATGACCCTCCTGTAACCAAGAATGTCAATGACAAAAATGTTCGAAAAGCAAGGAAAGAACAGATTAAACAAGATGAAGCTATTGGGTAACACAATCAGATTCTGCGTTGCCTGTATTCTGTTTTCTTCACTTCTGTAGGTCTTCTGCATTTTAAAAGTTCTGATGTCATTTCCTTGTTTTTCCTTCTCTTATGCAGGAAAGCTTTGCCTATTGCCATTGTTGTTGGAATCGCCATACTCGGTGGTGTTTACTTCTACCTCAACAGCACCTTCTAAGGTCTCAGATCGAAGTTTTGTACTCAGCACAGCTTATTCATAATACCCTGTATTTTGGACCTCCTTTAACATCAATAGCCGCAATCTCTTATTCTTTTTGTATAATCGTATTATCAAGAAATATTGAAGTACAAACTTAAAGAAAGCATATAAAAACAATTTACTATGTCATCTCCATTCCTTAGTTTTCAAGGACTTTGGCAGATTTCATTCCACTGACATTGGAAACTGTAAGTCTGTAATCCCTAATAGTCTGCCAAAGCTGATTTGCAGAAGAAGTTACTGGTCCATCAGCTTCTTGTTTCTAAGACATGGAGTTGGCAGATACACTTCATGCATCACATTTGCCAAGCAGATTTTACTAAATACAGTCTCTGGCCTGTGCATATAAAACTCTTCCAGGGAAGAGCATCTGCAGAAAAAGTCGAAATTAACTGCCTCTTGTTTCTAAGATTGAGAAAACTTGGATCTTCAATCATATACACCTCAACAAACCCAAAAATAGTAGTCCATCAAAGTCGCAGTTAGATCACCTCTGCAACTGAAAGTCTAGTACACGAGAAGTCTCAAATTAACACTGAAATCAAGACCCCCGTCTGGTTTTCTGTCATAATGCTGCAGGACAAAAAAATTACTTAAACTATCAGACATGATAAAAGACACAGTCATTTTTTTCCCGTGTATTGCAGAGAAGAGGTGAGGGGGTAATCTGCAAGTTAGTAACAGG

mRNA sequence

TTGGGATCTTTCTAGGCTCCTATAGAAGATAAGAAAAGCACAAAAAAGAGATGAGAGCGTGTGGGAAGTGAGGATGCCACGCTTTCAAGTTTCAATTCCAAACACAAACCAAATCCCACTTGCAATTTCCCTTACAATTTTCACCATTTGCCTCCACTCCATCAACAACCTCCCCTTATCTTCTAGGAAGCTTAAATCCGAAATCCAAAACCCCATTATTAACGATTATTGTTGCATTAACAAAGGATCATGGCAATGACAGTACAGTTGCAGCAGCAAGCAGCTACAACTGCAGCTACTGCAAGCAAGTCATGGAGTATACCTTCAGCACTGGTGCCTCCTGCAGGTACCAGCATCGGCCTCAGGCGTGCTGCTGATCGCTTCGCACTGCGATCATCTTTCTCGTCTTCCTCCCTCCGTCTTCCAAGTGTCAATGTTACTGCTGCCCCTAAATTCTCTATGCGTGTTGCATCCAAACAGGCCTACATCTGCCGTGATTGTGGATATATTTACAACGATCCTCGGAAACCTTTCGAGAAATTACCAGACAATTTCTTCTGTGCTGTATGCGGTGCTCCAAAGCGCAGATTCAGGCCATATGACCCTCCTGTAACCAAGAATGTCAATGACAAAAATGTTCGAAAAGCAAGGAAAGAACAGATTAAACAAGATGAAGCTATTGGGAAAGCTTTGCCTATTGCCATTGTTGTTGGAATCGCCATACTCGGTGGTGTTTACTTCTACCTCAACAGCACCTTCTAAGGTCTCAGATCGAAGTTTTGTACTCAGCACAGCTTATTCATAATACCCTGTATTTTGGACCTCCTTTAACATCAATAGCCGCAATCTCTTATTCTTTTTGTATAATCGTATTATCAAGAAATATTGAAGTACAAACTTAAAGAAAGCATATAAAAACAATTTACTATGTCATCTCCATTCCTTAGTTTTCAAGGACTTTGGCAGATTTCATTCCACTGACATTGGAAACTGTAAGTCTGTAATCCCTAATAGTCTGCCAAAGCTGATTTGCAGAAGAAGTTACTGGTCCATCAGCTTCTTGTTTCTAAGACATGGAGTTGGCAGATACACTTCATGCATCACATTTGCCAAGCAGATTTTACTAAATACAGTCTCTGGCCTGTGCATATAAAACTCTTCCAGGGAAGAGCATCTGCAGAAAAAGTCGAAATTAACTGCCTCTTGTTTCTAAGATTGAGAAAACTTGGATCTTCAATCATATACACCTCAACAAACCCAAAAATAGTAGTCCATCAAAGTCGCAGTTAGATCACCTCTGCAACTGAAAGTCTAGTACACGAGAAGTCTCAAATTAACACTGAAATCAAGACCCCCGTCTGGTTTTCTGTCATAATGCTGCAGGACAAAAAAATTACTTAAACTATCAGACATGATAAAAGACACAGTCATTTTTTTCCCGTGTATTGCAGAGAAGAGGTGAGGGGGTAATCTGCAAGTTAGTAACAGG

Coding sequence (CDS)

ATGGCAATGACAGTACAGTTGCAGCAGCAAGCAGCTACAACTGCAGCTACTGCAAGCAAGTCATGGAGTATACCTTCAGCACTGGTGCCTCCTGCAGGTACCAGCATCGGCCTCAGGCGTGCTGCTGATCGCTTCGCACTGCGATCATCTTTCTCGTCTTCCTCCCTCCGTCTTCCAAGTGTCAATGTTACTGCTGCCCCTAAATTCTCTATGCGTGTTGCATCCAAACAGGCCTACATCTGCCGTGATTGTGGATATATTTACAACGATCCTCGGAAACCTTTCGAGAAATTACCAGACAATTTCTTCTGTGCTGTATGCGGTGCTCCAAAGCGCAGATTCAGGCCATATGACCCTCCTGTAACCAAGAATGTCAATGACAAAAATGTTCGAAAAGCAAGGAAAGAACAGATTAAACAAGATGAAGCTATTGGGAAAGCTTTGCCTATTGCCATTGTTGTTGGAATCGCCATACTCGGTGGTGTTTACTTCTACCTCAACAGCACCTTCTAA

Protein sequence

MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPSVNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPPVTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo05684	Spo05684	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo05684.1	Spo05684.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05684.1.utr5p.1	Spo05684.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05684.1.CDS.4	Spo05684.1.CDS.4	CDS
Spo05684.1.CDS.3	Spo05684.1.CDS.3	CDS
Spo05684.1.CDS.2	Spo05684.1.CDS.2	CDS
Spo05684.1.CDS.1	Spo05684.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05684.1.utr3p.1	Spo05684.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05684.1.exon.4	Spo05684.1.exon.4	exon
Spo05684.1.exon.3	Spo05684.1.exon.3	exon
Spo05684.1.exon.2	Spo05684.1.exon.2	exon
Spo05684.1.exon.1	Spo05684.1.exon.1	exon

Homology

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BLAST of Spo05684.1 vs. NCBI nr
Match: gi|902186000|gb|KNA10600.1| (hypothetical protein SOVF_142920 [Spinacia oleracea])

HSP 1 Score: 331.3 bits (848), Expect = 1.000e-87
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1


		  
Query: 1   MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS 60
           MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS
Sbjct: 1   MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS 60

Query: 61  VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP 120
           VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP
Sbjct: 61  VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP 120

Query: 121 VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
           VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF
Sbjct: 121 VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 170

[Close]

BLAST of Spo05684.1 vs. NCBI nr
Match: gi|731374626|ref|XP_010667019.1| (PREDICTED: uncharacterized protein LOC104884122 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 287.3 bits (734), Expect = 1.700e-74
Identity = 146/170 (85.88%), Postives = 159/170 (93.53%), Query Frame = 1


		  
Query: 1   MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS 60
           MA+T+QLQQQA  T ATASKSW+IPSAL+PP GTSIGLRR ADRFALRSSFSSSSLRLPS
Sbjct: 1   MAITMQLQQQA--TTATASKSWTIPSALLPPTGTSIGLRRPADRFALRSSFSSSSLRLPS 60

Query: 61  VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP 120
           VNV+AAPKFSMRVASKQ+YICRDCGYIYND RKPFEKLPDN++C VCGAPKRRFR Y+PP
Sbjct: 61  VNVSAAPKFSMRVASKQSYICRDCGYIYNDTRKPFEKLPDNYYCPVCGAPKRRFRAYEPP 120

Query: 121 VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
           VTKN ND +VRKARK QIK+DEAIGKALPIAI+VGIA+LGGVYFYLNSTF
Sbjct: 121 VTKNANDADVRKARKAQIKKDEAIGKALPIAILVGIALLGGVYFYLNSTF 168

[Close]

BLAST of Spo05684.1 vs. NCBI nr
Match: gi|567888904|ref|XP_006436974.1| (hypothetical protein CICLE_v10032925mg [Citrus clementina])

HSP 1 Score: 203.8 bits (517), Expect = 2.500e-49
Identity = 108/165 (65.45%), Postives = 125/165 (75.76%), Query Frame = 1


		  
Query: 12  ATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRL------PSVNVTA 71
           A T A ++ + S P  L+ P G + GLRR ADRFAL+SSFS+ SL L        +  +A
Sbjct: 5   APTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQLLASA 64

Query: 72  APKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPPVTKNV 131
           APKFSMRVASKQAYICRDCGYIYN+ RKPF++LPDN+FC VCGAPKRRFRPY P VT+  
Sbjct: 65  APKFSMRVASKQAYICRDCGYIYNE-RKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124

Query: 132 NDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
           ND  VRKARKEQI++DEAIGKALPIAI V    L G+YFYLNS F
Sbjct: 125 NDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 168

[Close]

BLAST of Spo05684.1 vs. NCBI nr
Match: gi|641838699|gb|KDO57638.1| (hypothetical protein CISIN_1g040420mg [Citrus sinensis])

HSP 1 Score: 203.4 bits (516), Expect = 3.200e-49
Identity = 108/166 (65.06%), Postives = 125/166 (75.30%), Query Frame = 1


		  
Query: 12  ATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRL-------PSVNVT 71
           A T A ++ + S P  L+ P G + GLRR ADRFAL+SSFS+ SL L         +  +
Sbjct: 5   APTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLAS 64

Query: 72  AAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPPVTKN 131
           AAPKFSMRVASKQAYICRDCGYIYN+ RKPF++LPDN+FC VCGAPKRRFRPY P VT+ 
Sbjct: 65  AAPKFSMRVASKQAYICRDCGYIYNE-RKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRG 124

Query: 132 VNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
            ND  VRKARKEQI++DEAIGKALPIAI V    L G+YFYLNS F
Sbjct: 125 ANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169

[Close]

BLAST of Spo05684.1 vs. NCBI nr
Match: gi|224134208|ref|XP_002321763.1| (rubredoxin family protein [Populus trichocarpa])

HSP 1 Score: 199.9 bits (507), Expect = 3.600e-48
Identity = 109/177 (61.58%), Postives = 132/177 (74.58%), Query Frame = 1


		  
Query: 1   MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRL-- 60
           MA+   ++ QA  T        S P +L+ P G ++GL+   DRFAL+SSF S SL L  
Sbjct: 1   MALHAPIRLQATKT--------SPPPSLLAPNGNNVGLKGPTDRFALKSSFFSPSLHLLI 60

Query: 61  PSVN-----VTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRR 120
            S N      +AAP+FSMR A+KQAYICRDCGYIYND RKPF+K PDN+FC VCGAPKRR
Sbjct: 61  ASYNQQQPLASAAPRFSMRAATKQAYICRDCGYIYND-RKPFDKQPDNYFCPVCGAPKRR 120

Query: 121 FRPYDPPVTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
           FR Y P VTKNVNDK+VRKARKEQI++DEAIG+ALPIA+VVGI  L G+YFY+N++F
Sbjct: 121 FREYMPAVTKNVNDKDVRKARKEQIQKDEAIGRALPIAVVVGIVALAGIYFYINNSF 168

[Close]

BLAST of Spo05684.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTP2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_142920 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 7.100e-88
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1


		  
Query: 1   MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS 60
           MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS
Sbjct: 1   MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS 60

Query: 61  VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP 120
           VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP
Sbjct: 61  VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP 120

Query: 121 VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
           VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF
Sbjct: 121 VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 170

[Close]

BLAST of Spo05684.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B6V5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_006130 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.200e-74
Identity = 146/170 (85.88%), Postives = 159/170 (93.53%), Query Frame = 1


		  
Query: 1   MAMTVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRLPS 60
           MA+T+QLQQQA  T ATASKSW+IPSAL+PP GTSIGLRR ADRFALRSSFSSSSLRLPS
Sbjct: 1   MAITMQLQQQA--TTATASKSWTIPSALLPPTGTSIGLRRPADRFALRSSFSSSSLRLPS 60

Query: 61  VNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP 120
           VNV+AAPKFSMRVASKQ+YICRDCGYIYND RKPFEKLPDN++C VCGAPKRRFR Y+PP
Sbjct: 61  VNVSAAPKFSMRVASKQSYICRDCGYIYNDTRKPFEKLPDNYYCPVCGAPKRRFRAYEPP 120

Query: 121 VTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
           VTKN ND +VRKARK QIK+DEAIGKALPIAI+VGIA+LGGVYFYLNSTF
Sbjct: 121 VTKNANDADVRKARKAQIKKDEAIGKALPIAILVGIALLGGVYFYLNSTF 168

[Close]

BLAST of Spo05684.1 vs. UniProtKB/TrEMBL
Match: V4VCY7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032925mg PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.700e-49
Identity = 108/165 (65.45%), Postives = 125/165 (75.76%), Query Frame = 1


		  
Query: 12  ATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRL------PSVNVTA 71
           A T A ++ + S P  L+ P G + GLRR ADRFAL+SSFS+ SL L        +  +A
Sbjct: 5   APTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQLLASA 64

Query: 72  APKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPPVTKNV 131
           APKFSMRVASKQAYICRDCGYIYN+ RKPF++LPDN+FC VCGAPKRRFRPY P VT+  
Sbjct: 65  APKFSMRVASKQAYICRDCGYIYNE-RKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124

Query: 132 NDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
           ND  VRKARKEQI++DEAIGKALPIAI V    L G+YFYLNS F
Sbjct: 125 NDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 168

[Close]

BLAST of Spo05684.1 vs. UniProtKB/TrEMBL
Match: A0A067ER95_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040420mg PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.200e-49
Identity = 108/166 (65.06%), Postives = 125/166 (75.30%), Query Frame = 1


		  
Query: 12  ATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSLRL-------PSVNVT 71
           A T A ++ + S P  L+ P G + GLRR ADRFAL+SSFS+ SL L         +  +
Sbjct: 5   APTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLAS 64

Query: 72  AAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPPVTKN 131
           AAPKFSMRVASKQAYICRDCGYIYN+ RKPF++LPDN+FC VCGAPKRRFRPY P VT+ 
Sbjct: 65  AAPKFSMRVASKQAYICRDCGYIYNE-RKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRG 124

Query: 132 VNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNSTF 171
            ND  VRKARKEQI++DEAIGKALPIAI V    L G+YFYLNS F
Sbjct: 125 ANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169

[Close]

BLAST of Spo05684.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MS74_GOSAR (Putative beta-1,4-xylosyltransferase IRX10L OS=Gossypium arboreum GN=F383_27204 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.500e-48
Identity = 113/175 (64.57%), Postives = 129/175 (73.71%), Query Frame = 1


		  
Query: 4   TVQLQQQAATTAATASKSWSIPSALVPPAGTSIGLRRAADRFALRSSFSSSSL------- 63
           T Q+  QA T +   S S   P A  P AG    LR  +DRFAL+SSF S SL       
Sbjct: 408 TTQMALQAPTISIKPSNS---PLAPTPNAG----LRPPSDRFALKSSFFSPSLHLLLPSP 467

Query: 64  --RLPSVNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRF 123
             RLP+   + APKFSMRVASKQAYICRDCGYIYN+ R PFEK+ D++FC VCGAPKRRF
Sbjct: 468 HQRLPTNTASPAPKFSMRVASKQAYICRDCGYIYNE-RTPFEKVSDSYFCPVCGAPKRRF 527

Query: 124 RPYDPPVTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGVYFYLNST 170
           +PY P VTKN ND +VRKARKEQIK+DEA+GKALPIAIVVGIA+L G+YFYLNST
Sbjct: 528 KPYQPAVTKNANDTDVRKARKEQIKRDEAVGKALPIAIVVGIAVLAGLYFYLNST 574

[Close]

BLAST of Spo05684.1 vs. TAIR (Arabidopsis)
Match: AT5G51010.1 (Rubredoxin-like superfamily protein)

HSP 1 Score: 165.6 bits (418), Expect = 2.600e-41
Identity = 84/127 (66.14%), Postives = 103/127 (81.10%), Query Frame = 1


		  
Query: 48  RSSFSSS-SLRL----PSVNVTAAPKFSMRVASKQAYICRDCGYIYNDPRKPFEKLPDNF 107
           RSSF    S+RL     S++ ++AP+FSMRV+SKQAYICRDCGYIYND R PF+KLPDN+
Sbjct: 28  RSSFLPYYSMRLLGNKKSLSKSSAPRFSMRVSSKQAYICRDCGYIYND-RTPFDKLPDNY 87

Query: 108 FCAVCGAPKRRFRPYDPPVTKNVNDKNVRKARKEQIKQDEAIGKALPIAIVVGIAILGGV 167
           FC VC APKRRFR Y P V+KNVNDK+VRKARK ++++DEA+GKALPI I VG+  L  +
Sbjct: 88  FCPVCAAPKRRFRAYMPDVSKNVNDKDVRKARKAELQRDEAVGKALPIGIAVGVLALAAL 147

Query: 168 YFYLNST 170
           YFY+NST
Sbjct: 148 YFYVNST 153

[Close]

BLAST of Spo05684.1 vs. TAIR (Arabidopsis)
Match: AT5G17170.1 (rubredoxin family protein)

HSP 1 Score: 54.7 bits (130), Expect = 6.500e-8
Identity = 36/104 (34.62%), Postives = 52/104 (50.00%), Query Frame = 1


		  
Query: 65  AAPKFSMRVA----SKQAYICRDCGYIYNDPRKPFEKLPDNFFCAVCGAPKRRFRPYDPP 124
           A P+F  ++     ++  +IC DCG+IY  P K F++ PD + C  C APK+RF  YD  
Sbjct: 179 APPRFGRKLTETQKARATHICLDCGFIYTLP-KSFDEQPDTYVCPQCIAPKKRFAKYD-- 238

Query: 125 VTKNVNDKNVRKARKEQIKQDEAIGKAL-PIAIVVG-IAILGGV 163
                            +   +AIG  L PI ++VG +A LG V
Sbjct: 239 -----------------VNTGKAIGGGLPPIGVIVGLLAGLGAV 262

The following BLAST results are available for this feature:

BLAST of Spo05684.1 vs. NCBI nr
BLAST of Spo05684.1 vs. UniProtKB/TrEMBL
BLAST of Spo05684.1 vs. ExPASy Swiss-Prot
BLAST of Spo05684.1 vs. TAIR (Arabidopsis)

BLAST of Spo05684.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902186000\|gb\|KNA10600.1\|	1.0e-87	100.	hypothetical protein SOVF_1429...	[more]
gi\|731374626\|ref\|XP_010667019.1\|	1.7e-74	85.8	PREDICTED: uncharacterized pro...	[more]
gi\|567888904\|ref\|XP_006436974.1\|	2.5e-49	65.4	hypothetical protein CICLE_v10...	[more]
gi\|641838699\|gb\|KDO57638.1\|	3.2e-49	65.0	hypothetical protein CISIN_1g0...	[more]
gi\|224134208\|ref\|XP_002321763.1\|	3.6e-48	61.5	rubredoxin family protein [Pop...	[more]

BLAST of Spo05684.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QTP2_SPIOL	7.1e-88	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B6V5_BETVU	1.2e-74	85.8	Uncharacterized protein OS=Bet...	[more]
V4VCY7_9ROSI	1.7e-49	65.4	Uncharacterized protein OS=Cit...	[more]
A0A067ER95_CITSI	2.2e-49	65.0	Uncharacterized protein OS=Cit...	[more]
A0A0B0MS74_GOSAR	2.5e-48	64.5	Putative beta-1,4-xylosyltrans...	[more]

BLAST of Spo05684.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo05684.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G51010.1	2.6e-41	66.1	Rubredoxin-like superfamily pr...	[more]
AT5G17170.1	6.5e-8	34.6	rubredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004039	Rubredoxin-type fold	GENE3D	2.20.28.10		coord: 75..118 score: 3.8
IPR024934	Rubredoxin-like domain	PROFILE	PS50903	RUBREDOXIN_LIKE	coord: 76..117 score: 11
None	No IPR available	PANTHER	PTHR17130	MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25	coord: 28..170 score: 3.5
None	No IPR available	PANTHER	PTHR17130:SF25	SUBFAMILY NOT NAMED	coord: 28..170 score: 3.5
None	No IPR available	unknown	SSF57802	Rubredoxin-like	coord: 76..121 score: 1.57

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005506	iron ion binding