Spo03180.1 (mRNA) | SpinachBase

Overview


Name	Spo03180.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Brevis radix-like protein
Location	SpoScf_01703 : 4265 .. 16768 (+)
Sequence length	2221

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAGTGGGGGCCAAAAACTAAAGAAGATGCCAACTCCATAAAATCAACGTGTTCTGCACTTTCCACTTCTCCCCCCTTCTTCCCCTTCGTTCTCTCTCCATTTTCACCTCTCCATCTTCTTCTTCCTAATTTCTTCTAATCAAATAATTAAATTACCTTTTACTTCATCATAATTCCCAGTTTCTAAAGAAAATTCAACAACCAATTCAATTTCACAAAGGTATGTACTCAATTTTCCAATTTTCTTTAATTTAATAAATTTGAAGTCTGTTCTAATGGTGGTTTGGTGAAGAAATTAAAACTTCAACTCAATTTTGCAGGATTGAAAAAAATAAACCCAGAAAAACGTGAATAATGTTAACGTGCATAGCTCGTCCGAAGCAACAACAGGGGCATAACAGTCATCATCATAATCATCAACATCAACACGACGATCCAGACTCCGTTCACACTCCCAACAGTAAACAAGCCATTAAAACCCTAACTTCTCAGGTAATTTCCAATTTACAAATTACTGAAATTATCAATTATTTTCTTCCCCATTTTATTTTTTGTTTTTTAAAAAAATTTGGTGAATAATGTAGATCAAAGGAATAGCATTAAAAGCATCAGGGGCGTACAAATGCAACCCATGTTCACACCCCAACTCGGGCGGACCAACCGGGTCAGGTTCGGGTCAACTCAAGAGCTACACCGAGTCAGAGACTGGCTCAGAGAAGTTGAAGCCGCCAAGGGCATTTAAACGGACGTTGAGCGCGAACTCGTCGTCGTCGGCGGCGACGCCGAGGTGGGGGAAAGAGATGGAGGCGCGGTTGAAAGGGCTGTCTGTTGGCGGCGAGGTAACGCCGGTGATGTCCGTGTCGGCGAGTGGGCGGCGACTTGACCCGGTTGTGTTGGTGGAGGAAGACGAACCTAAAGAGTGGGTTGCTCAGGTGGAGCCCGGCGTTTTGATCACTTTTGTTTCTTTGCCACGTGGCGGCAATGATCTTAAGCGCATTCGATTTAAGTAAGTTTTTTTTTTAAAAAAAATTCTTTGTTTTACTTGATTTTTTTACTGCTTTGATTTGATTGGTTTTTGAGTTTAACGGACTTGATTTGGTTCTATGAAGTATTTATTTCTGTCAATTCTGAATTTCTGATTAATTAAACACTGTTCTTGAGAAAATCCTTCTATTTTTAGAGTACACAAGTAAGTAATTTTGGTATACTTGTTATGAGCGAGCTTATAATTTTATAACCGCTATTTTTATACGAGTGTATCAAAATCAATAAAATGGTGTGATAAAATCAATTTTCATGATTAAGTGTATTTATGTGAAGTATCTATACTAATATATTAAAAGGCGTTGCGAAAAATGTTTATGTGTCACATAGAACTCTCCTGCTTACGCCACATCATCCACTCACCAAGGTTATGTGATGTTATTGACAACCAAAAATCAATACAATAAGGTTCGAACACAAGACCTCAAGTTTGGAGAATAACTCTCATTACCATCTTAACCAACCACTAATTGTTGTTTATCCATGCACGTTAATTTATAATACATGTTAACATGAAGTCTAAAACAACTAAATTTTTTATGTTACTTCTTATTTCGTATGGACTATATTAGAATAAAAATAACCGTTACAATATTAGGAAAACCGTGAATTAAACAATTAAAACATTAAGAAAATTACTTTTCATGGTGCAGGTAATGTACATGTGTAGTTGATGAATTTAATGAATCTTTTCACTTTTATGGTCTACACGTATCTTAGTCAAATATTGAGTTGAAAAGAAAAAAAAATCGAATTTAATTATTCAAAGTAGCAACCGGGGCATCGCCCGGGCTACACACTAGTTAATACACTAATACGAGTATTTGCTAGTGGGTGAAGATATAAAGGTGCAACAAACTTGAAATTGTTTTTTTAACTTCAAAATCAACAGCCATAGATTGTTAAGTTAAATTAACATTTTAAATGGAGGACGTATCTTATTTGGTTGACAAAATGCAAGAAACGGAAATTATCTGTCGTTAAATTGTATAAAAAAAGGGAATTTTCACAAGTCTAGAGTACGAGTTTGGTTGACAAAATGCAAGAAATGGAAATTATCGGTCGTTAAAATTGCATAAAAAACGGGTATTCACAAGTCTTATAAGAATACGAGTCAAGTTTGAATTTTACTTTATTTGGACTTCAGAGCATTTATTATAAAATGATATGATTTGCAAGTTATAACCCTAATGAGAGAAATAAAGTAAATTCCGAATTACTACGGGGTATATCCTTGATTTATATTCCGTATCAGCCTATTAAGTGGTAATTTTGTGATAAAATAGAAACATATGTACCGTCGAAATGGTTGAATATTTCTCCCATTTGAATACAAGTATTTAACTATTTATCAAGGAGATTAAACTATGGTCATTTGGAGAGAGTGATTGAACCATGAAAGGTTTGAACTAAACTAGGGTCGTTTAGTGAGACTAATAATATACGGAGTAGTAATGTACGGTTTAGATTAATGTTTTGTTAAGAATAATTAAGACGGTAATTAAACTCCCTCTCCCTCCATAATGGGGTTCGATTCTGCCTAGAAAATTGGTTGGTAGAATAGGGCGTGTTTGGATTCTTTAAAATTGTTTGTCTATATTATACTCCCATATTTCGCGGGCTCCGATAATTTGAAGATTGACACTAGTTTGATCATAGGGTGGAGTCTACATTTAGCATGTAACCTAAAGAATAAAGAATAAAGAATTGTTTGTTTGTGCACAAAAGTAGTTGTGTTTCCATCATCATGATCATCGATGATGTCATATCGTCCTTATTGAAGAAATTTGATTTTTTGAGGATTTTGTTTTTGGTAGATGTACATTTCTCTTCACTATAAGACCTGAACTTATTTGAACTGAATTTATTTAATCTGAATTTATCTGAGTTTTTTAAGAATTTATAGGATCATATTTAACTTATTTAATCTTATAAGACCTTATTAAAGCTATTTATACCTTATGAAAAATTTATTAGATTAATTATCTCTAAACTTTTAGTAATTAACATATTTCACCTTTGAATACACTTATTTAGTAAAAGTAATGAATAATCATATGTTTCTATCTTTAAATAAAATTATTATCTTGCACGAATAGTACGAAAATAAAATGGGGTGGACATGTATAGTCAAATTTTTAAGTACTTGTCTTTGAAAGAGACACTTTTTAAAGCTAAGATGAGGTAAAAGAACATTGTCTTCGAAATCTTATGTCTTTTTTTGTTGATTTTTCGTAACAAAACAATTAGACTCACAAAGTAGGTTGTGTTACATTGTCTTCGAAATCTAATGTCTTTTTTTGTTGTTTCTTCGAAATCTTATGTCCTTTTCTATGCTATCATTTGTTACTCTAGCTTATTTTTTTGACTTGTGAATATGATTTTTCTCTAACACTATTTGATCAAAAGGGGTTAAAACTTTTTCCATGTCAAGATAAAGTTGGGAATTATGTTGATATGGAGTTAAAAAGAGGTTAAATGGGTAATGGATAATCTCTTTTTTCCATTTTGATGAAAAAACATGTCTATTGCCTCTAAAGGGAAGAAAAACTATCTATTAGTTCTAAAAGGAAGGAAAAATGTCACCTAGTTCTAAAAGAGGAGGAAAAAAATGTCAATCACTTTAATCTAACTTTGATAGTCCGTATTATGGACATTTTAAGCCTTGTAAGTTTATTATATTTATGCTTTCCCTTTTTTTTCTATTCCTCTTTTTATTTAGAATACAATTGAATTTGAGGATTAAACTTTAAAATGTAATAGATGTTTTAAAAAATTATTTAGGTGAGTCGTCTGATTTTCTCTTCTAACAATATACGGAGTAAAAGACTAGTCTGTGCAAAATTAATTAGAAAGATGAACTATAGGGTTTAATCAATGTATCCATCATTCCCTTTTTGGAGCAATTTTTTATTTCTTTTTGGTGTACCATCCGTTTTACCCTTAGGGCTAATTCGGATTCGGGCCGAGTTCAAAGCGGATAGATTCCAATCACCTACCAAATTCAGCCTTAATCACCACTAAACCAACCGACAATTGATTTTTTTTAAGCAAAACTTGATTGATTACAAAAGACATTAAAAACTAATAATTCAAAATCACTTTTTTGACTTAAGGGTATCCTGTCTAAAACCAGGCCTTAAAAATTACAGACAAATATGTTCTGTGTTACTCCGTAATGATTAAGATTCAACTTACTGTAAAATCTACACTTTTTGCCCAGTGGTAAATAAAATGAAAAAAAATAGTCAAAAAAAGAGGAAGTAATTGCAAGAATGGTTGGTTAGTGGGCCAATCCAATTCTGATTGTGTCTTGCATGAATTTTTATTTAATAAGCATTATGTCGATATGTCGGATGTGGGGTCCCCCTTCTTTTTTCCAAAGCTTCTTTCACGCCAAGGTTGAGTTAGCTTTGTCAGTTTCTGCTAGTTTTTCCTGTCCTTTACCATACCATAAAATAAAGGTCATCACAAATTGACATAACATTAACATACCCAAATCCAATTTTCTTGTAAAATGGGTGCGCATAGTAACGTTGGACGTACGTATGTTATAGAATGGACATGATTTTGCATCAACTATTACTATCATACACATGTACTTGTTCGAGTGTTGGGGTCCCGACCGTCCCGTTCATTAATGTCTTGTGTTTTTTGTGTGTACTCATGGTACACTGTCAGGTTCGAGTAATGTGACGGTGTGGTTAAATGTAATGAAATGAAAAAGTTATTATGGAGTACTCCTGAAGGCCTTATTCTCTTCACGTGATTCGGTTTTATTTTCTAGTTTCTGTGATGTGATCTGATCTGACCTGAATGTTCTCCAACTCATAAGTAAGAACTTACACGCGAGATGATGTAGGTCAAGAATACTAGCCAAATTGTTGGTTTGAGATGTAGGTAAAAAGTACTAGCCAATTGTTGGTTTATATTGTTACTCATTGACTCATTATGTTTAAGTGTTACATACTTCCTCTGTTTCATATTAAAGTAACGCATTGGATTTTGGTAGGAGATAATAATAAGTACTGGGAGCACCAACACAAGTTGGTGGAGTTGGTAAAGAACTCACCTTGTGATTGAGAAGTCCGGGGGGGAGTCTTATCAGCCGCAAAATGCTTGGGAGTTGCTCAAACGAAGATCTGCTAAGCTAGACCAGTTAACTTGTGATAGGTGACAATTCAGTAGGGTTTGGGAGCAAAAATTTGGTAATAATAATAAAAGGTACAGGGAGCAAAAAATTGGTAATAATAATAAAAGGTACAGGGAGCAAAAAATTGGTAAAATGGGATGAGTAATGTCACGAGTCCATAACCTAGTCTGGTAGCCCTTAATGGCAATTAGTCAAGAGGAGAAGCCCTTTAATGGCACCAAATTGATCACTGTAGATGGCTTGGGAAGAAAATGTAAAAAGTTGTCATTATATAGAAGTGATTTGAACATTTGATTAAGATATGTTTGGCATCTCTTGATTTAAAAAATGGATGTTTTCTTTCACTATTGACAAATTATATTGTTTCCCATGCTCAGATGTCATGATCTGGGGCCAATTTATCCCTTGAAATAAGGACAATGTGGCTTTATCAAAAAGTAGTTTGGTGATCATTTTAGTGGACTAAACCCATTATAGTACTAGTGAGAAAAAAGGCTAAAAAGCTAGCTAGCTGTTGAATTAGAACAACCACAAAAAGATTATGTTAATCATTGCTTCTTAATTATTGCACTAAAGCATGTGTAAAAAGTTAAGGAAGAAGGCATAATTTACTTACCCTCAGTATAATTTACTGTAGTGGAAATTCTTTCAACCTTGCAGTGCCACTAAGGAGGAAATGGGTTGGGCTCGTGTTCAAGACCAATTGTCCATATATGTAAGCGTGTAGATTATGCATATTTGAGTATCATAGCTTGCAAATTTGCAATAGCCTTTGTGACTTTCTGTCAACTGTTCCCGAACAAAACTATATGGTAGTATTACGACCTTGTTCTATTCACCTGATTTGGTCTGATTTTTCTAGTTTTTGGTCTGGTCTGTATGCTTTATGTGAGTGTTTTTTGCTTTTTCTGGCCTGATTTGATTTTGTTGGTCTGATCTAATAAGCAATAAGCATAAAGTGAAGAGAACAAAGCCGTAGTCCTTCTAAGTTTGGAAGCTACTAGTCTACTACACACGTAACATGAAATGTACGGTGTGGAGCTATGGTATTGATGCAGTTCCTGAAAGTCCTACTAATTAAAATGTTTATTTACATGAATGGATCCAATAATCTTCCAATGTCTTTGTTTACGTAGACCTTTTTTAAGGTTATCTACTTATATATTACTAATTTACTATGGAGTATGAAATATGGATTCTGATTGTTTGTATGGTTTGATTAGCCGAGAAATGTTCAACAAATGGCAAGCCCAAAAATGGTGGACGGATAACTACGAGAAGATCATGGAACTGTATAATGTTCAGAGGCTTAGTCGTAACGCCTTTCCTCTTCCAACTCCCCCAAGATCTGAAGATGATAACAGCTCTATGGTACGTAATGGCCTACCACTAATTAATTGCTTAAATATCATGTTTATGGACTTATGGTTGGTGCAAAGATGAGTAACAAGTAACTTTTCTTATAGATGGCATTGTGGACTTATAGATCCCAGATCCTTCATTTCTGACTTTACTTAATGGGAATAGTACTTTAAAGAAACATACTCCCTCCGTCCCGGAATACTTGACCTGTTTTCCTTATCGGGCCGTCCCTTAATACTTGACCTGTTTCTAAAAATGGAAATACTCTAACAATATTATATTATTTCTCACTCCACCCCTATTAACCCACCTACCCCCTACTCCATACAAAAAATAATTAAAAATTTAACCCCTATTCTCCTCCAACCCCACCCCTTCACACATTTCCCATTAACTACATTAAAATAATACCCCACTATCAACTACTACCTATTAAATTAAATAAGTCAATTCAAGTCCCTTAAACTTTGTGCCGGTCAAACTGAGTCGAGTATTCCGGGACGGAGGGAGTAATTGTAAAGATACATTTAAACCAACACATATACCAAAAGTAAAAAAAGTGAGGACTTGTTATTTGCCACCAACATGTACTCCATTTGGCTTTGTTCTCTTCGTCTGATCTGGTTTGATTTTTCTAGTTTTTGATTTGGTCTGAATGTTTTATTTTAGTGCCTTTTGCCTTTTTTGGTTTGGTCTTATCTACTCTGATTTTTCTGGTTTGGTTTAATAAGCAATAAGAATAAGGTGAAATTGTCCATTGTCGGACCCGTATGGCCTTTTGTTTCTACTGTTCAGAGCACCTTAAGAAAACACTAAGGTCATCAACTTAAGTCAAATGAGTATAGACTAAAATTACAATTACTTCCCCGTAAAAAAAAAAAGGAAATTTTGGTATTTACTACCTTTAAAATACACCATTTTTGTATTTACTACCTTATGAAATTTTTATTTTAAATTACTACCTTAAACTTCAAGATTTTATTTAGGCAAATTTGTTAAAAAGGACCTTTTATAACCCAAATTTTGCGAGAAATGACCTTATATAATTTTTTTTGTGAAAACATACCTTAATGTAAATTTTTTTGCGAGAAAGGACCTTATATAATTTTTTTTTGTGAAATCACACCTTAATGTAATTTTTTTTTTGCGAAAGACAACCAAAAATTAATTTCCGGCATTGACTGAGCTTTTTCGGCCATTGACTTGCACGTGAGAAGCACGCGTGGCTTTATTTTGCTAATCACACCCAATTTTCCTCCAAAATTCTAAGCTTTAAAACCTAAAGTTGAAAAAAAAATCGAAATAAAATCAAGCTTGAAAATTCAAGACTCGGGAAAATCAATGTCTTTAGCCAACGTAAGCCACACGTGCTGCTCACGTGCAAGTCAATGGCCGGAAAAGCTAAATCAATGCCGGAAACTTTCCTTAGGTCCTTTCTCGCAAAAAAAATTACTTTAAGGTGTGTTCTCACAAAAAAAATTATATAAGGTCCTTTCTCGCAAAATTTGAGTTATAAAAGGTCCTTTTTGGCAAATTTGCCTTTTATTTATTTACTACCACTTTACAGTTTTCTCATTTTAAAATTAAGATATCTCTTTCGTTTCTTAATCGTTTAAAGTGATTCGAAGTTCATTATTTTCCTTTTTCTATAGGGATTTCATTGAGAACGTCATTTCAAAAATATTCGTTTGATAATTCATAAATATTTTAAAATTTTAAAAATAATATTTAATTTGTTTAAACTTTTACGAAATGTTAAAAAGTAAGATCCATATGGAATCCTTACATATAAATGAGAAGATTGAGTTTTGAATCACTTAAAATGATTAAAAAACGAAAGAGATATCTCAATTTAAAAATGAGAAAACTGTAAAATGGTAGTGAATACAAAAAAAATGGAACTTTAAGGTAGTAATTTAAAATAAAATTTTCATAAGGTAGTAAATACAAAAGTGGTGTATTTTTAAGGTAGTAAATACCAAAAAATCCATAAAAAAATTACAATTACTTCTTTGATCGCCGCCTTTTATTTTAAAGTAGCAATTATATATCTTAGATTGTACGGAGTATATTATTTTTAACATATTTACAAAAGTACCACCCGATATGCATATTTCGTTAATCTTGAAGATTATTTAGGAATTTCTCGTGTGATGTTTATTTTCTATCATCATGATGTCAACTTCTACTACTTCTTCTACCCACTACAGAATTCAAAAATGATGGAGTCATCAATTGGTGACAGTCCAGTTACACCACCATTAAGCAAAGAAAGTATACCACGTAACCTTTACCGTGGAATGAGCATTGGTATGGGATACTCATCCTCAGATTCTTTCGAACAACATTCAAAGCAATCACGTCAATATGAATCAAGTGGTCTAGCCTCAACACCAAAACATTCCAACATTAGTGGAGTTACTGCAAAGACAGAACTATCTTCTATGGATGAGTCACTAAGATCTACCTCTTCTAGAGAAGGAGATCGTTCTGGAGAACTGTCAATTAGTAATGGCAGTGATATGGAGAGTGAGTGGGTTGAAGAAGACGAGCCAGGAGTTTATATTACTATTCGAGCTTTGCCTGGTGGGCGAAGAGAGCTCAGACGCGTTAGGTTCAGGTACTTATTCTTTATCCGTTTCAAAATGATATTTACGGTTACTATTTGCACAAATATTAAGACATAATAAAAATAATTGTGTAAAAAGGTTGTTGAATCTAATAAAATATGGATAAAGTATGGTAGATGGGTAAAAATGTGGGTATGTGTAAGAAAAAATGAATAAAGTAAGAGAAAGTGAATGGAAAGTTGTAAATGTTATAGGGTAAGAGAGGTAAGAGAGGTAAGATAATAAATTTATATGGTAAAAATAGAATAAAATAAAGTGTAAAGAACATTATGAAACGGACTAAAACGGAAAGTGTAAAATCATTTTGAAACGGAGGTAATATATACGTTCTCCGTTTCTTTTTAGTTACAACACTTTGTTTTCACGCTTGTCAATGTATAACTTAAACAAGTAATATTTTTTGATTATCGATAACTAAAAGTTGTGAAAAATTGATATTCGAAATATATATATTAAGACGAATCTAACAAGATCCCCACGTGAATACTTTTTCCCTTATGTATACTCCCTCCGTCCCGGAATACTTGACTTGTTTTCCTTATCGGGCCGTCCCTTAATACTTGACCTGTTTCTAATAATGGAAATATTCTAACAATATTATATTATTTCTCACTCCACCCCTATTAACCCACCTACCCCTACTCCATACAAAAAATAATTAAAAATTCAACCCCTACTCTCCCCCAACCCCACCTCTTAACCCACCTCCCACTAACTACATTAAAATAATACCCCACTATCAACTACTACCTATTAAATTAAATAAGTCAATTCAAGTTCCTTAAACTCTGTGCCGGTCAAACTGGGTCGAGTATTCCGGGACGGAGGGAGTAAATAATTAAAACATACTCCGTACGTATTAGTAGAGTATATGAATAGTTCAAAAACAAAGTGTTGCATACTTGCAACTATAAAGAACGGAGGAAATATATTTCAAAATTTTTTGTTAAAAAAGTTGGTACAAGTCCTTATAGTTCTCCTAGGCAAAAAGACTAAAGTAATTAATAGTGCAAGCACCAAGTTCTTCATTTGAGTTTTTCATGCTTAGTTTTACTCCTCTGCTATTATTGAAGTTAATGATTAATCAGCATAATTTGTTTCTGTTTGAAATTAGCTAAAGCACTGAAGCCCGTAGCTATTTCCACTATGTCACAAATGAATTTCTTTGAAGTGCTATTTTGTGTGAGTAACATAAGCTATGTTACTCGGACTCTGCTACCCATATCAGACACGGATACGTGTCCAAGTATCCAACACGGCTATTTTGTGAAACAATTAAATGCTTTTGGTCCAAAATAAAGTGTCCAATTGTTCATACTCATATCCGAGTGTCGAGGATCTGACACGGGTATTTGAGGCAAAATAAAGGAGTCCGTGTAACATAGAACATAAGTACCCCAATTACATGAAATGATGAAAACGGGAGTACAGTTTGTCTTTTCCAAAACACTGATTGCTACTAAAGTTTTCCGTTGCTAAATGTCTAAGATGTACTCTTTAACATTGAGATGGCGATATATATAATAAATCAGGGTGACCTCCATATTTCATGAGGTAGTTGAGATCCGTGAATTAAGATAGTACAGTATATGCTCTTATATCTTGTGTTTCAAGTTGACAATGAGAGAACATGATAGTACACTTAACATGGAAGTCCCACCTTATAAATGCAGTGTGCAAATTAATATAAGCCCTCAAAGAGAAATGGAAATATTGATTGATAGAAGAAGAAATAAGGTCACATGGACCACTATGTACATGTCTGCTATCCACCTCAAGTTTACATCAGAAATTTCATGTTAACATCCAAAGTACAATCAATCTAAAGTTGGAAAGTGTGTAATGATAAAATCAAATCCTCACACTAATGCCTCTGTTAGTGTTTGAAAGCGACACAGTCGTGTTAGATTTAACAAGTACGGTAACAGAGATGGTTGTGGATTAATATGGACTGTTCTTTTTTCCTGGTTTGTGGATCATATTGGACTAAACTCAATTGTTCATTAGGCTATATGGGTTCCTGATTTATTGTGAAGTCACATTATTGCAGGTTAGATCAAAGATCAATGACTAAACCCCCTACTAACTTCGCCTTGACGTTCAAATAATGAGAAAACATTCACATCTTTGATTATCAAAACAAAACCTTCCTTTCATTTGCTTGATCTTCTTTTAATTTTAGGCCTTGTTCTCTTCATCTAGTCTGATCAAATTTTTCTAGTTTCTGTTCTGGTATGGTTTGGTTTTTCTGGTCTGATGTGGTCTAAAAAGCAATAAGAATAAGGTGAAGAGAACAGAGCCTAACAATCCATTTGTTGTTTTGGCATAGGGACTGGAATGTTTTGGTTTTGAAGGTTTCTGTAGATTTTGCTTGATCTTAGCTTTTCTGTACGCTTTCTTCCTTGGGATGTGATCATATTGTCATGTGAATTTGTGACTAAACTGAAATTTCTTCACTCAATGCAGTCGAGAAAAGTTTGGAGAGATGCATGCTAGAGTTTGGTGGGAAGAGAATAGAGCACGTATACACGAACAATACTTGTAATCAGAAAGATCAAACAAGTACTTGTAATTGTGAGTATTGATGAACAAAGAGGAGCAAGCTAAGTTCTATCTGTCTAGACTACATTCTTTATATGTTACTACCTCAGTATAAATACCTAAAGAGTAAAGAATGCCTTGTTATATATGGCCTTTGAAGAAGAAATATTATGAACCAACGCAAATTGGTAGAGTTGGTTACCTTGTGACTTGGAGCCCCAGTCAACTGCAAGTTCAGTAGGATCCCTATATATATATGTGCTGCATGTATCGATAACTTCAGAAGGCATTCTATNTTTTTTTTTTTTTTTTTTTTTTCTGTTCTATTTATTCTCTTTTTGTTCTGATGACTTCTGGTGTATGCAACTGGTATAAGGGAATACTGGTGAGTACAAGTTTAGAAGGATTAGACCTTAAATGTTGACAAGCAGATATGTAAACAGACAACCATGTTAATGGCAAGGTTCTTCCAAGGGAAAGAAATGATGCAATCTCAATTTGGTATATCAGAATCTATAATGAGACCTAGTATATACGAAGTATAGAGTTTTTTCCCTTTCTCACGTGGCTACAAACCCGCCCTTAGGCTCTATTTGATTTTTCATGGTTTTCAAGGAAAAATACATGTAATATATACTCCCTCCGTATTTGTAACGCCCCGACCTCTAATTCAATAATTAAAGCATAATTAGCAGCGGAATTAACCTAATTGGTCAGGGCATTACCTGCCGTAACTTCCTTTTCGGAAATTATAAGGCAAACATCAATCATAA

mRNA sequence

AAGAGTGGGGGCCAAAAACTAAAGAAGATGCCAACTCCATAAAATCAACGTGTTCTGCACTTTCCACTTCTCCCCCCTTCTTCCCCTTCGTTCTCTCTCCATTTTCACCTCTCCATCTTCTTCTTCCTAATTTCTTCTAATCAAATAATTAAATTACCTTTTACTTCATCATAATTCCCAGTTTCTAAAGAAAATTCAACAACCAATTCAATTTCACAAAGGATTGAAAAAAATAAACCCAGAAAAACGTGAATAATGTTAACGTGCATAGCTCGTCCGAAGCAACAACAGGGGCATAACAGTCATCATCATAATCATCAACATCAACACGACGATCCAGACTCCGTTCACACTCCCAACAGTAAACAAGCCATTAAAACCCTAACTTCTCAGATCAAAGGAATAGCATTAAAAGCATCAGGGGCGTACAAATGCAACCCATGTTCACACCCCAACTCGGGCGGACCAACCGGGTCAGGTTCGGGTCAACTCAAGAGCTACACCGAGTCAGAGACTGGCTCAGAGAAGTTGAAGCCGCCAAGGGCATTTAAACGGACGTTGAGCGCGAACTCGTCGTCGTCGGCGGCGACGCCGAGGTGGGGGAAAGAGATGGAGGCGCGGTTGAAAGGGCTGTCTGTTGGCGGCGAGGTAACGCCGGTGATGTCCGTGTCGGCGAGTGGGCGGCGACTTGACCCGGTTGTGTTGGTGGAGGAAGACGAACCTAAAGAGTGGGTTGCTCAGGTGGAGCCCGGCGTTTTGATCACTTTTGTTTCTTTGCCACGTGGCGGCAATGATCTTAAGCGCATTCGATTTAACCGAGAAATGTTCAACAAATGGCAAGCCCAAAAATGGTGGACGGATAACTACGAGAAGATCATGGAACTGTATAATGTTCAGAGGCTTAGTCGTAACGCCTTTCCTCTTCCAACTCCCCCAAGATCTGAAGATGATAACAGCTCTATGAATTCAAAAATGATGGAGTCATCAATTGGTGACAGTCCAGTTACACCACCATTAAGCAAAGAAAGTATACCACGTAACCTTTACCGTGGAATGAGCATTGGTATGGGATACTCATCCTCAGATTCTTTCGAACAACATTCAAAGCAATCACGTCAATATGAATCAAGTGGTCTAGCCTCAACACCAAAACATTCCAACATTAGTGGAGTTACTGCAAAGACAGAACTATCTTCTATGGATGAGTCACTAAGATCTACCTCTTCTAGAGAAGGAGATCGTTCTGGAGAACTGTCAATTAGTAATGGCAGTGATATGGAGAGTGAGTGGGTTGAAGAAGACGAGCCAGGAGTTTATATTACTATTCGAGCTTTGCCTGGTGGGCGAAGAGAGCTCAGACGCGTTAGGTTCAGTCGAGAAAAGTTTGGAGAGATGCATGCTAGAGTTTGGTGGGAAGAGAATAGAGCACGTATACACGAACAATACTTGTAATCAGAAAGATCAAACAAGTACTTGTAATTGTGAGTATTGATGAACAAAGAGGAGCAAGCTAAGTTCTATCTGTCTAGACTACATTCTTTATATGTTACTACCTCAGTATAAATACCTAAAGAGTAAAGAATGCCTTGTTATATATGGCCTTTGAAGAAGAAATATTATGAACCAACGCAAATTGGTAGAGTTGGTTACCTTGTGACTTGGAGCCCCAGTCAACTGCAAGTTCAGTAGGATCCCTATATATATATGTGCTGCATGTATCGATAACTTCAGAAGGCATTCTATNTTTTTTTTTTTTTTTTTTTTTTCTGTTCTATTTATTCTCTTTTTGTTCTGATGACTTCTGGTGTATGCAACTGGTATAAGGGAATACTGGTGAGTACAAGTTTAGAAGGATTAGACCTTAAATGTTGACAAGCAGATATGTAAACAGACAACCATGTTAATGGCAAGGTTCTTCCAAGGGAAAGAAATGATGCAATCTCAATTTGGTATATCAGAATCTATAATGAGACCTAGTATATACGAAGTATAGAGTTTTTTCCCTTTCTCACGTGGCTACAAACCCGCCCTTAGGCTCTATTTGATTTTTCATGGTTTTCAAGGAAAAATACATGTAATATATACTCCCTCCGTATTTGTAACGCCCCGACCTCTAATTCAATAATTAAAGCATAATTAGCAGCGGAATTAACCTAATTGGTCAGGGCATTACCTGCCGTAACTTCCTTTTCGGAAATTATAAGGCAAACATCAATCATAA

Coding sequence (CDS)

ATGTTAACGTGCATAGCTCGTCCGAAGCAACAACAGGGGCATAACAGTCATCATCATAATCATCAACATCAACACGACGATCCAGACTCCGTTCACACTCCCAACAGTAAACAAGCCATTAAAACCCTAACTTCTCAGATCAAAGGAATAGCATTAAAAGCATCAGGGGCGTACAAATGCAACCCATGTTCACACCCCAACTCGGGCGGACCAACCGGGTCAGGTTCGGGTCAACTCAAGAGCTACACCGAGTCAGAGACTGGCTCAGAGAAGTTGAAGCCGCCAAGGGCATTTAAACGGACGTTGAGCGCGAACTCGTCGTCGTCGGCGGCGACGCCGAGGTGGGGGAAAGAGATGGAGGCGCGGTTGAAAGGGCTGTCTGTTGGCGGCGAGGTAACGCCGGTGATGTCCGTGTCGGCGAGTGGGCGGCGACTTGACCCGGTTGTGTTGGTGGAGGAAGACGAACCTAAAGAGTGGGTTGCTCAGGTGGAGCCCGGCGTTTTGATCACTTTTGTTTCTTTGCCACGTGGCGGCAATGATCTTAAGCGCATTCGATTTAACCGAGAAATGTTCAACAAATGGCAAGCCCAAAAATGGTGGACGGATAACTACGAGAAGATCATGGAACTGTATAATGTTCAGAGGCTTAGTCGTAACGCCTTTCCTCTTCCAACTCCCCCAAGATCTGAAGATGATAACAGCTCTATGAATTCAAAAATGATGGAGTCATCAATTGGTGACAGTCCAGTTACACCACCATTAAGCAAAGAAAGTATACCACGTAACCTTTACCGTGGAATGAGCATTGGTATGGGATACTCATCCTCAGATTCTTTCGAACAACATTCAAAGCAATCACGTCAATATGAATCAAGTGGTCTAGCCTCAACACCAAAACATTCCAACATTAGTGGAGTTACTGCAAAGACAGAACTATCTTCTATGGATGAGTCACTAAGATCTACCTCTTCTAGAGAAGGAGATCGTTCTGGAGAACTGTCAATTAGTAATGGCAGTGATATGGAGAGTGAGTGGGTTGAAGAAGACGAGCCAGGAGTTTATATTACTATTCGAGCTTTGCCTGGTGGGCGAAGAGAGCTCAGACGCGTTAGGTTCAGTCGAGAAAAGTTTGGAGAGATGCATGCTAGAGTTTGGTGGGAAGAGAATAGAGCACGTATACACGAACAATACTTGTAA

Protein sequence

MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYKCNPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATPRWGKEMEARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDNSSMNSKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQYESSGLASTPKHSNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEEDEPGVYITIRALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo03180	Spo03180	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo03180.1	Spo03180.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03180.1.exon.1	Spo03180.1.exon.1	exon
Spo03180.1.exon.2	Spo03180.1.exon.2	exon
Spo03180.1.exon.3	Spo03180.1.exon.3	exon
Spo03180.1.exon.4	Spo03180.1.exon.4	exon
Spo03180.1.exon.5	Spo03180.1.exon.5	exon
Spo03180.1.exon.6	Spo03180.1.exon.6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03180.1.utr5p.1	Spo03180.1.utr5p.1	five_prime_UTR
Spo03180.1.utr5p.2	Spo03180.1.utr5p.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03180.1.CDS.1	Spo03180.1.CDS.1	CDS
Spo03180.1.CDS.2	Spo03180.1.CDS.2	CDS
Spo03180.1.CDS.3	Spo03180.1.CDS.3	CDS
Spo03180.1.CDS.4	Spo03180.1.CDS.4	CDS
Spo03180.1.CDS.5	Spo03180.1.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03180.1.utr3p.1	Spo03180.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo03180.1 vs. NCBI nr
Match: gi|902161449|gb|KNA06578.1| (hypothetical protein SOVF_179720 [Spinacia oleracea])

HSP 1 Score: 782.3 bits (2019), Expect = 3.900e-223
Identity = 397/398 (99.75%), Postives = 398/398 (100.00%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYKC 60
           MLTCIARPKQQQGHNSHHH+HQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYKC
Sbjct: 1   MLTCIARPKQQQGHNSHHHHHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYKC 60

Query: 61  NPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATPRWGKEME 120
           NPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATPRWGKEME
Sbjct: 61  NPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATPRWGKEME 120

Query: 121 ARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRGGND 180
           ARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRGGND
Sbjct: 121 ARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRGGND 180

Query: 181 LKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDNSSMNSKM 240
           LKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDNSSMNSKM
Sbjct: 181 LKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDNSSMNSKM 240

Query: 241 MESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQYESSGLASTPKH 300
           MESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQYESSGLASTPKH
Sbjct: 241 MESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQYESSGLASTPKH 300

Query: 301 SNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEEDEPGVYITIRAL 360
           SNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEEDEPGVYITIRAL
Sbjct: 301 SNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEEDEPGVYITIRAL 360

Query: 361 PGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
           PGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL
Sbjct: 361 PGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 398

[Close]

BLAST of Spo03180.1 vs. NCBI nr
Match: gi|731372806|ref|XP_010666454.1| (PREDICTED: protein Brevis radix-like 4 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 674.5 bits (1739), Expect = 1.200e-190
Identity = 355/403 (88.09%), Postives = 366/403 (90.82%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYKC 60
           MLTCIARPKQQ GHNS  H+H HQHDDPDS HTPN+KQAIKTLTSQIKGIALKASGAYKC
Sbjct: 1   MLTCIARPKQQHGHNSVSHHH-HQHDDPDSAHTPNNKQAIKTLTSQIKGIALKASGAYKC 60

Query: 61  NPCSHPNSGGPTGSGSGQLKSYTESETGS--EKLKPPR-AFKRTLSANSSSSAATPRWGK 120
           NPCSHPNSGG  GS S Q K Y ESETGS  EKLKP    +KRTLSANSSSSAATPRWGK
Sbjct: 61  NPCSHPNSGGTVGSVSDQSKKYPESETGSGSEKLKPAAWTYKRTLSANSSSSAATPRWGK 120

Query: 121 EMEARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRG 180
           EMEARLKGLSVGGEVTPVMS SASGRR+DPVVLVEE EPKEWVAQVEPGVLITFVSLPRG
Sbjct: 121 EMEARLKGLSVGGEVTPVMSASASGRRVDPVVLVEESEPKEWVAQVEPGVLITFVSLPRG 180

Query: 181 GNDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDNSSMN 240
           GNDLKRIRFNR+MFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSED+ S M 
Sbjct: 181 GNDLKRIRFNRDMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDEISKM- 240

Query: 241 SKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQY--ESSGLA 300
                 SIGDSPVTPPLSKES+PRNLYRGM + MGYSSSDSFEQHSKQSRQY  ESSGLA
Sbjct: 241 -----ESIGDSPVTPPLSKESLPRNLYRGMGVAMGYSSSDSFEQHSKQSRQYNNESSGLA 300

Query: 301 STPKHSNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEEDEPGVYI 360
           STPKHSNISGVTAKTE SSMDESL+STSSRE DRSGELSISN SDME+EWVEEDEPGVYI
Sbjct: 301 STPKHSNISGVTAKTETSSMDESLQSTSSREADRSGELSISNASDMETEWVEEDEPGVYI 360

Query: 361 TIRALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
           T+RALP GRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL
Sbjct: 361 TLRALPNGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 396

[Close]

BLAST of Spo03180.1 vs. NCBI nr
Match: gi|225444796|ref|XP_002280093.1| (PREDICTED: protein Brevis radix-like 4 [Vitis vinifera])

HSP 1 Score: 471.1 bits (1211), Expect = 1.900e-129
Identity = 263/401 (65.59%), Postives = 308/401 (76.81%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQ-AIKTLTSQIKGIALKASGAYK 60
           MLTCI R KQ    +        Q ++ ++ +TP +KQ +IK LT QIK +ALKA+GAY+
Sbjct: 1   MLTCITRSKQLSDESLK------QTEEANASNTPGTKQQSIKALTCQIKDMALKATGAYR 60

Query: 61  -CNPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATPRWGKE 120
            CNPCS         S   Q +SY ES++ S   +   +++RT     SSS+ TPRWGKE
Sbjct: 61  NCNPCS--------ASVQHQSRSYAESDSASASERFRWSYRRT----GSSSSTTPRWGKE 120

Query: 121 MEARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRGG 180
           MEARLKGLS  GE TP    SASGRR++ VV VEE+EPKEWVAQVEPGVLITFVSLPRGG
Sbjct: 121 MEARLKGLS-SGEGTPA---SASGRRVESVVFVEENEPKEWVAQVEPGVLITFVSLPRGG 180

Query: 181 NDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDNSSMNS 240
           NDLKRIRF+REMFNKWQAQ+WW +NY+++MELYNVQR +R AFPLPTPPRSED++S M  
Sbjct: 181 NDLKRIRFSREMFNKWQAQRWWAENYDRVMELYNVQRFNRQAFPLPTPPRSEDESSKM-- 240

Query: 241 KMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQ-YESSGLAST 300
                S  DSPVTPPL+KE +PRNLYR   +GMGYSSSDS + H  Q R  Y+S GL ST
Sbjct: 241 ----ESAEDSPVTPPLTKERLPRNLYRPSGLGMGYSSSDSLDHHPMQPRHFYDSGGLTST 300

Query: 301 PKHSNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEEDEPGVYITI 360
           PK S+ISG  AKTE SSMD S+R++SSRE DRSGELS+SN SD+E+EWVEEDEPGVYITI
Sbjct: 301 PKLSSISG--AKTETSSMDASIRTSSSREADRSGELSVSNASDLETEWVEEDEPGVYITI 360

Query: 361 RALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
           RALPGG RELRRVRFSRE+FGEMHAR+WWEENRARIHEQYL
Sbjct: 361 RALPGGTRELRRVRFSRERFGEMHARLWWEENRARIHEQYL 371

[Close]

BLAST of Spo03180.1 vs. NCBI nr
Match: gi|764510148|ref|XP_011460503.1| (PREDICTED: protein Brevis radix-like 4 [Fragaria vesca subsp. vesca])

HSP 1 Score: 469.5 bits (1207), Expect = 5.600e-129
Identity = 266/401 (66.33%), Postives = 315/401 (78.55%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYK- 60
           MLTCIARPK+    +        Q +  DS +TP +K AIK+LT Q+K +ALKASGAY+ 
Sbjct: 1   MLTCIARPKKLGDESLS------QPEVSDSTNTPANKAAIKSLTFQLKDMALKASGAYRH 60

Query: 61  CNPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATPR-WGKE 120
           CNPC+ P + G    G+G+L     S+  S++ +   +++RT     SSS+ TPR WGKE
Sbjct: 61  CNPCTGPATQGRL-KGTGEL-----SDAESDRFR--WSYRRT----GSSSSTTPRTWGKE 120

Query: 121 MEARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRGG 180
           MEARLKG+S  GE TP    SASGRR DPVV VEE EPKEWVAQVEPGVLITFVSLPRGG
Sbjct: 121 MEARLKGIS-SGEGTPN---SASGRRADPVVFVEEREPKEWVAQVEPGVLITFVSLPRGG 180

Query: 181 NDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDNSSMNS 240
           NDLKRIRF+RE+FNKWQAQ+WW +NY+K+MELYNVQR +R AFPLPTPPRSED++S  +S
Sbjct: 181 NDLKRIRFSREIFNKWQAQRWWAENYDKVMELYNVQRFNRAAFPLPTPPRSEDESSIQSS 240

Query: 241 KMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQY-ESSGLAST 300
           KM   S+ DSPVTPPL++E +PRNLYR     MGYSSSDS + H  QS+QY +S G+ ST
Sbjct: 241 KM--ESVEDSPVTPPLTRERLPRNLYRPPGTAMGYSSSDSLDHHPMQSKQYCDSVGVNST 300

Query: 301 PKHSNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEEDEPGVYITI 360
           PK S+ISG   KTE SSMD S+RS+SSR+ DRSGELSISN SD+E+EWVE+DEPGVYITI
Sbjct: 301 PKLSSISG--TKTETSSMDASIRSSSSRDADRSGELSISNASDLETEWVEQDEPGVYITI 360

Query: 361 RALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
           RALPGG+RELRRVRFSREKFGEMHAR+WWEENRARIHEQYL
Sbjct: 361 RALPGGKRELRRVRFSREKFGEMHARMWWEENRARIHEQYL 375

[Close]

BLAST of Spo03180.1 vs. NCBI nr
Match: gi|566176459|ref|XP_002309199.2| (zinc finger family protein [Populus trichocarpa])

HSP 1 Score: 468.4 bits (1204), Expect = 1.300e-128
Identity = 272/414 (65.70%), Postives = 313/414 (75.60%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPN-----------SKQAIKTLTSQIKG 60
           MLTCIAR KQ  G +S       Q DD  +  T N            +QAIK+LTSQ+K 
Sbjct: 1   MLTCIARSKQP-GDDS-----LSQADDDSAATTANHHPSAAKQQQQQQQAIKSLTSQLKD 60

Query: 61  IALKASGAYK-CNPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSS 120
           +ALKASGAY+ CNPC+ PN    T + S    + TES+  SEK      F+ +L    SS
Sbjct: 61  MALKASGAYRHCNPCTAPN----TTTQSRLRSNSTESDAESEK------FRWSLRRTGSS 120

Query: 121 SAATPR-WGKEMEARLKGLSVG-GEVTPVMSVSASGRRLDP-VVLVEEDEPKEWVAQVEP 180
           S+ TPR WGKEMEARLKG+S   GE TP  SV+ SGRR+DP +V VEE EPKEWVAQVEP
Sbjct: 121 SSTTPRTWGKEMEARLKGISSSSGEGTP-NSVNGSGRRVDPPIVFVEEKEPKEWVAQVEP 180

Query: 181 GVLITFVSLPRGGNDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPT 240
           GVLITFVSLPRGGNDLKRIRF+R+MFNKWQAQ+WW +NY++IMELYNVQR +R AFPLPT
Sbjct: 181 GVLITFVSLPRGGNDLKRIRFSRDMFNKWQAQRWWAENYDRIMELYNVQRFNRQAFPLPT 240

Query: 241 PPRSEDDNSSMNSKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQ 300
           PPRSED++S M       S  DSPVTPPL++E +PRNLYR   +GMGYSSSDS + H  Q
Sbjct: 241 PPRSEDESSKM------ESAEDSPVTPPLNRERLPRNLYRPTGMGMGYSSSDSLDHHPLQ 300

Query: 301 SRQY-ESSGLASTPKHSNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESE 360
           +R Y +S G  STPK S+ISG  AKTE SSMD S+RS+SSRE DRSGELSISN SDME+E
Sbjct: 301 ARHYCDSIGFTSTPKLSSISG--AKTETSSMDASIRSSSSREADRSGELSISNASDMETE 360

Query: 361 WVEEDEPGVYITIRALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
           WVE+DEPGVYITIRALPGG+RELRRVRFSRE+FGEMHARVWWEENRARIHEQYL
Sbjct: 361 WVEQDEPGVYITIRALPGGKRELRRVRFSRERFGEMHARVWWEENRARIHEQYL 389

[Close]

BLAST of Spo03180.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QIP3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_179720 PE=4 SV=1)

HSP 1 Score: 782.3 bits (2019), Expect = 2.700e-223
Identity = 397/398 (99.75%), Postives = 398/398 (100.00%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYKC 60
           MLTCIARPKQQQGHNSHHH+HQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYKC
Sbjct: 1   MLTCIARPKQQQGHNSHHHHHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYKC 60

Query: 61  NPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATPRWGKEME 120
           NPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATPRWGKEME
Sbjct: 61  NPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATPRWGKEME 120

Query: 121 ARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRGGND 180
           ARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRGGND
Sbjct: 121 ARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRGGND 180

Query: 181 LKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDNSSMNSKM 240
           LKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDNSSMNSKM
Sbjct: 181 LKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDNSSMNSKM 240

Query: 241 MESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQYESSGLASTPKH 300
           MESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQYESSGLASTPKH
Sbjct: 241 MESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQYESSGLASTPKH 300

Query: 301 SNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEEDEPGVYITIRAL 360
           SNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEEDEPGVYITIRAL
Sbjct: 301 SNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEEDEPGVYITIRAL 360

Query: 361 PGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
           PGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL
Sbjct: 361 PGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 398

[Close]

BLAST of Spo03180.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B828_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_002150 PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 8.000e-191
Identity = 355/403 (88.09%), Postives = 366/403 (90.82%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYKC 60
           MLTCIARPKQQ GHNS  H+H HQHDDPDS HTPN+KQAIKTLTSQIKGIALKASGAYKC
Sbjct: 1   MLTCIARPKQQHGHNSVSHHH-HQHDDPDSAHTPNNKQAIKTLTSQIKGIALKASGAYKC 60

Query: 61  NPCSHPNSGGPTGSGSGQLKSYTESETGS--EKLKPPR-AFKRTLSANSSSSAATPRWGK 120
           NPCSHPNSGG  GS S Q K Y ESETGS  EKLKP    +KRTLSANSSSSAATPRWGK
Sbjct: 61  NPCSHPNSGGTVGSVSDQSKKYPESETGSGSEKLKPAAWTYKRTLSANSSSSAATPRWGK 120

Query: 121 EMEARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRG 180
           EMEARLKGLSVGGEVTPVMS SASGRR+DPVVLVEE EPKEWVAQVEPGVLITFVSLPRG
Sbjct: 121 EMEARLKGLSVGGEVTPVMSASASGRRVDPVVLVEESEPKEWVAQVEPGVLITFVSLPRG 180

Query: 181 GNDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDNSSMN 240
           GNDLKRIRFNR+MFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSED+ S M 
Sbjct: 181 GNDLKRIRFNRDMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDEISKM- 240

Query: 241 SKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQY--ESSGLA 300
                 SIGDSPVTPPLSKES+PRNLYRGM + MGYSSSDSFEQHSKQSRQY  ESSGLA
Sbjct: 241 -----ESIGDSPVTPPLSKESLPRNLYRGMGVAMGYSSSDSFEQHSKQSRQYNNESSGLA 300

Query: 301 STPKHSNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEEDEPGVYI 360
           STPKHSNISGVTAKTE SSMDESL+STSSRE DRSGELSISN SDME+EWVEEDEPGVYI
Sbjct: 301 STPKHSNISGVTAKTETSSMDESLQSTSSREADRSGELSISNASDMETEWVEEDEPGVYI 360

Query: 361 TIRALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
           T+RALP GRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL
Sbjct: 361 TLRALPNGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 396

[Close]

BLAST of Spo03180.1 vs. UniProtKB/TrEMBL
Match: F6HGU3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g01460 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 1.400e-129
Identity = 263/401 (65.59%), Postives = 308/401 (76.81%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQ-AIKTLTSQIKGIALKASGAYK 60
           MLTCI R KQ    +        Q ++ ++ +TP +KQ +IK LT QIK +ALKA+GAY+
Sbjct: 1   MLTCITRSKQLSDESLK------QTEEANASNTPGTKQQSIKALTCQIKDMALKATGAYR 60

Query: 61  -CNPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATPRWGKE 120
            CNPCS         S   Q +SY ES++ S   +   +++RT     SSS+ TPRWGKE
Sbjct: 61  NCNPCS--------ASVQHQSRSYAESDSASASERFRWSYRRT----GSSSSTTPRWGKE 120

Query: 121 MEARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRGG 180
           MEARLKGLS  GE TP    SASGRR++ VV VEE+EPKEWVAQVEPGVLITFVSLPRGG
Sbjct: 121 MEARLKGLS-SGEGTPA---SASGRRVESVVFVEENEPKEWVAQVEPGVLITFVSLPRGG 180

Query: 181 NDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDNSSMNS 240
           NDLKRIRF+REMFNKWQAQ+WW +NY+++MELYNVQR +R AFPLPTPPRSED++S M  
Sbjct: 181 NDLKRIRFSREMFNKWQAQRWWAENYDRVMELYNVQRFNRQAFPLPTPPRSEDESSKM-- 240

Query: 241 KMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQ-YESSGLAST 300
                S  DSPVTPPL+KE +PRNLYR   +GMGYSSSDS + H  Q R  Y+S GL ST
Sbjct: 241 ----ESAEDSPVTPPLTKERLPRNLYRPSGLGMGYSSSDSLDHHPMQPRHFYDSGGLTST 300

Query: 301 PKHSNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEEDEPGVYITI 360
           PK S+ISG  AKTE SSMD S+R++SSRE DRSGELS+SN SD+E+EWVEEDEPGVYITI
Sbjct: 301 PKLSSISG--AKTETSSMDASIRTSSSREADRSGELSVSNASDLETEWVEEDEPGVYITI 360

Query: 361 RALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
           RALPGG RELRRVRFSRE+FGEMHAR+WWEENRARIHEQYL
Sbjct: 361 RALPGGTRELRRVRFSRERFGEMHARLWWEENRARIHEQYL 371

[Close]

BLAST of Spo03180.1 vs. UniProtKB/TrEMBL
Match: B9HDV5_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0006s14720g PE=4 SV=2)

HSP 1 Score: 468.4 bits (1204), Expect = 8.800e-129
Identity = 272/414 (65.70%), Postives = 313/414 (75.60%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPN-----------SKQAIKTLTSQIKG 60
           MLTCIAR KQ  G +S       Q DD  +  T N            +QAIK+LTSQ+K 
Sbjct: 1   MLTCIARSKQP-GDDS-----LSQADDDSAATTANHHPSAAKQQQQQQQAIKSLTSQLKD 60

Query: 61  IALKASGAYK-CNPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSS 120
           +ALKASGAY+ CNPC+ PN    T + S    + TES+  SEK      F+ +L    SS
Sbjct: 61  MALKASGAYRHCNPCTAPN----TTTQSRLRSNSTESDAESEK------FRWSLRRTGSS 120

Query: 121 SAATPR-WGKEMEARLKGLSVG-GEVTPVMSVSASGRRLDP-VVLVEEDEPKEWVAQVEP 180
           S+ TPR WGKEMEARLKG+S   GE TP  SV+ SGRR+DP +V VEE EPKEWVAQVEP
Sbjct: 121 SSTTPRTWGKEMEARLKGISSSSGEGTP-NSVNGSGRRVDPPIVFVEEKEPKEWVAQVEP 180

Query: 181 GVLITFVSLPRGGNDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPT 240
           GVLITFVSLPRGGNDLKRIRF+R+MFNKWQAQ+WW +NY++IMELYNVQR +R AFPLPT
Sbjct: 181 GVLITFVSLPRGGNDLKRIRFSRDMFNKWQAQRWWAENYDRIMELYNVQRFNRQAFPLPT 240

Query: 241 PPRSEDDNSSMNSKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQ 300
           PPRSED++S M       S  DSPVTPPL++E +PRNLYR   +GMGYSSSDS + H  Q
Sbjct: 241 PPRSEDESSKM------ESAEDSPVTPPLNRERLPRNLYRPTGMGMGYSSSDSLDHHPLQ 300

Query: 301 SRQY-ESSGLASTPKHSNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESE 360
           +R Y +S G  STPK S+ISG  AKTE SSMD S+RS+SSRE DRSGELSISN SDME+E
Sbjct: 301 ARHYCDSIGFTSTPKLSSISG--AKTETSSMDASIRSSSSREADRSGELSISNASDMETE 360

Query: 361 WVEEDEPGVYITIRALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
           WVE+DEPGVYITIRALPGG+RELRRVRFSRE+FGEMHARVWWEENRARIHEQYL
Sbjct: 361 WVEQDEPGVYITIRALPGGKRELRRVRFSRERFGEMHARVWWEENRARIHEQYL 389

[Close]

BLAST of Spo03180.1 vs. UniProtKB/TrEMBL
Match: A0A067F9G8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017074mg PE=4 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 2.500e-128
Identity = 262/404 (64.85%), Postives = 317/404 (78.47%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYK- 60
           MLTCIAR KQ  G +S     Q +  D  +      +QAIK+LTSQ+K +ALKASGAY+ 
Sbjct: 1   MLTCIARSKQP-GDDSLS---QPEDSDSSTGSGSTKQQAIKSLTSQLKDMALKASGAYRH 60

Query: 61  CNPCSHPNSGGPTGSGSGQLKSYT-ESETGSEKLKPPRAFKRTLSANSSSSAATPR--WG 120
           C+PC+ P      G+   +LKS + ES+  S++ +   +++RT     SSS+ TPR  WG
Sbjct: 61  CSPCTAP------GAAQSRLKSNSGESDADSDRFR--WSYRRT----GSSSSTTPRTTWG 120

Query: 121 KEMEARLKGLSVG-GEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLP 180
           KEMEARLKG+S   GE TP+ SVS  GRR+DPVV +EE+EPKEWVAQVEPGVLITFVSLP
Sbjct: 121 KEMEARLKGISSSSGEATPIKSVS--GRRVDPVVFIEENEPKEWVAQVEPGVLITFVSLP 180

Query: 181 RGGNDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDNSS 240
           RGGNDLKRIRF+R+MFNKWQAQ+WW +NY+++MELYNVQR +R AFPLPTPPRSED++S 
Sbjct: 181 RGGNDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYNVQRFNRQAFPLPTPPRSEDESSK 240

Query: 241 MNSKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQ-YESSGL 300
           +       S+ +SPVTPPL++E +PRNLYR   +GMGYSSSDS + H  Q+R  Y+S GL
Sbjct: 241 I------ESVEESPVTPPLTRERLPRNLYRPTGMGMGYSSSDSLDHHPMQARNYYDSGGL 300

Query: 301 ASTPKHSNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEEDEPGVY 360
            STPK S+ISG  AKTE SSMD S+RS+SSR+ DRSGELSISN SD+E+EWVE+DEPGVY
Sbjct: 301 TSTPKLSSISG--AKTETSSMDASIRSSSSRDADRSGELSISNASDLETEWVEQDEPGVY 360

Query: 361 ITIRALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
           ITIRALPGG+RELRRVRFSREKFGEMHAR+WWEENRARIHEQYL
Sbjct: 361 ITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYL 378

[Close]

BLAST of Spo03180.1 vs. ExPASy Swiss-Prot
Match: BRXL4_ARATH (Protein Brevis radix-like 4 OS=Arabidopsis thaliana GN=BRXL4 PE=2 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 3.500e-115
Identity = 244/412 (59.22%), Postives = 296/412 (71.84%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYK- 60
           MLTCIAR K+    +S       Q DDPDS +        K+LTSQ+K +ALKASGAY+ 
Sbjct: 1   MLTCIARSKRAGDESSG------QPDDPDSKNA-------KSLTSQLKDMALKASGAYRH 60

Query: 61  CNPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAAT------- 120
           C PC+        G G G +K+   S +     +  + FK     ++SS  AT       
Sbjct: 61  CTPCTAAQG---QGQGQGPIKNNPSSSSVKSDFESDQRFKMLYGRSNSSITATAAVAATQ 120

Query: 121 ---PR-WGKEMEARLKGLSVGGEVTPVMSVSASGR-RLDPVVLVEEDEPKEWVAQVEPGV 180
              PR WGKEMEARLKG+S  GE TP    SASGR R+DP+V VEE EPKEWVAQVEPGV
Sbjct: 121 QQQPRVWGKEMEARLKGIS-SGEATPK---SASGRNRVDPIVFVEEKEPKEWVAQVEPGV 180

Query: 181 LITFVSLPRGGNDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPP 240
           LITFVSLP GGNDLKRIRF+R+MFNK QAQ+WW DNY+K+MELYNVQ+LSR AFPLPTPP
Sbjct: 181 LITFVSLPGGGNDLKRIRFSRDMFNKLQAQRWWADNYDKVMELYNVQKLSRQAFPLPTPP 240

Query: 241 RSEDDNSSMNSKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSR 300
           RSED+N+      +E    D+P TPPL+KE +PR ++R   +   YSSSDS + +S QS+
Sbjct: 241 RSEDENAK-----VEYHPEDTPATPPLNKERLPRTIHRPPGLA-AYSSSDSLDHNSMQSQ 300

Query: 301 QYESSGLA-STPKHSNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWV 360
           Q+  SGL  STPK S+IS   AKTE SS+D S+RS+SSR+ DRS E+S+SN SD+++EWV
Sbjct: 301 QFYDSGLLNSTPKVSSIS--VAKTETSSIDASIRSSSSRDADRSEEMSVSNASDVDNEWV 360

Query: 361 EEDEPGVYITIRALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
           E+DEPGVYITI+ LPGG+RELRRVRFSRE+FGEMHAR+WWEENRARIHEQYL
Sbjct: 361 EQDEPGVYITIKVLPGGKRELRRVRFSRERFGEMHARLWWEENRARIHEQYL 384

[Close]

BLAST of Spo03180.1 vs. ExPASy Swiss-Prot
Match: BRXL2_ARATH (Protein Brevis radix-like 2 OS=Arabidopsis thaliana GN=BRXL2 PE=2 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 2.700e-99
Identity = 228/408 (55.88%), Postives = 278/408 (68.14%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSV-HTPNSKQAIKTLTSQIKGIALKASGAYK 60
           MLTCIA  KQ   +N      +   ++ D V  TP SKQ IK+LTSQIK +A+KASGAYK
Sbjct: 1   MLTCIACTKQLNTNNGGSKKQEEDEEEEDRVIETPRSKQ-IKSLTSQIKDMAVKASGAYK 60

Query: 61  -CNPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATPR-WGK 120
            C PCS         S   + +SY +S+  S   +   A+KR     + S ++TP+  GK
Sbjct: 61  SCKPCSG-------SSNQNKNRSYADSDVASNSGRFRYAYKR-----AGSGSSTPKILGK 120

Query: 121 EMEARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRG 180
           EME+RLKG  + GE TP    S SGR    V + EEDE KEWVAQVEPGVLITFVSLP G
Sbjct: 121 EMESRLKGF-LSGEGTPE---SMSGRTESTVFMEEEDELKEWVAQVEPGVLITFVSLPEG 180

Query: 181 GNDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDNSSMN 240
           GND+KRIRF+REMF+KWQAQKWW +N++K+MELYNVQ+ ++ + PLPTPPRSED +S + 
Sbjct: 181 GNDMKRIRFSREMFDKWQAQKWWAENFDKVMELYNVQQFNQQSVPLPTPPRSEDGSSRIQ 240

Query: 241 SKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQH---SKQSRQYESSGL 300
           S        + P TPPL+KE          S G GY+SS S         QSR ++SSGL
Sbjct: 241 STK------NGPATPPLNKE---------CSRGKGYASSGSLAHQPTTQTQSRHHDSSGL 300

Query: 301 ASTPKHSNISGVTAKTELSSMDESLRSTSSR---EGDRSG-ELSISNGSDMESEWVEEDE 360
           A+TPK S+ISG   KTE SS+DES RS+ SR   E D SG ELS+SN SD+E+EWVE+DE
Sbjct: 301 ATTPKLSSISG--TKTETSSVDESARSSFSREEEEADHSGEELSVSNASDIETEWVEQDE 360

Query: 361 PGVYITIRALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
            GVYITIRALP G RELRRVRFSREKFGE +AR+WWE+NRARI +QYL
Sbjct: 361 AGVYITIRALPDGTRELRRVRFSREKFGETNARLWWEQNRARIQQQYL 374

[Close]

BLAST of Spo03180.1 vs. ExPASy Swiss-Prot
Match: BRXL3_ARATH (Protein Brevis radix-like 3 OS=Arabidopsis thaliana GN=BRXL3 PE=2 SV=2)

HSP 1 Score: 333.2 bits (853), Expect = 3.900e-90
Identity = 217/426 (50.94%), Postives = 268/426 (62.91%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYK- 60
           MLTCIA  KQ   +N    + + + ++   + TP +KQAIK+LTSQ+K +A+KASGAYK 
Sbjct: 1   MLTCIACTKQLNTNNGG--STREEDEEHGVIGTPRTKQAIKSLTSQLKDMAVKASGAYKN 60

Query: 61  CNPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATPR-WGKE 120
           C PCS     G T     Q ++Y +S+  S+  +   +++R  +A S     TP+ WG E
Sbjct: 61  CKPCS-----GTTNRN--QNRNYADSDAASDSGRFHYSYQRAGTATS-----TPKIWGNE 120

Query: 121 MEARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRGG 180
           ME+RLKG+S   E TP    S SGR  + +V +E+DE KEWVAQVEPGVLITFVSLP+GG
Sbjct: 121 MESRLKGIS-SEEGTPT---SMSGRT-ESIVFMEDDEVKEWVAQVEPGVLITFVSLPQGG 180

Query: 181 NDLKRIRFN--------------------------REMFNKWQAQKWWTDNYEKIMELYN 240
           NDLKRIRF                           REMFNKWQAQKWW +N+EK+MELYN
Sbjct: 181 NDLKRIRFRSTRFPYYRDQLLLWCRQGWVFWPQNCREMFNKWQAQKWWVENFEKVMELYN 240

Query: 241 VQRLSRNAFPLPTPPRSEDDNSSMNSKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMG 300
           VQ  ++ + PL TPP SED  S +       S+ DSPVTPPL +E   RN+         
Sbjct: 241 VQ-FNQQSVPLQTPPVSEDGGSQI------QSVKDSPVTPPLERERPHRNI--------- 300

Query: 301 YSSSDSFEQHSKQSRQYESSGLASTPKHSNISGVTAKTELSSMDESLRSTSSREGDRSGE 360
                             SSG ASTPK S+ISG   KTE SS+D S RS+S    DRS E
Sbjct: 301 ----------------PGSSGFASTPKLSSISG--TKTETSSIDGSARSSSV---DRSEE 360

Query: 361 LSISNGSDMESEWVEEDEPGVYITIRALPGGRRELRRVRFSREKFGEMHARVWWEENRAR 399
           +S+SN SDMESEWVE+DEPG+YITIRALP G RELRRVRFSR+KFGE HAR+WWE+NRAR
Sbjct: 361 VSVSNASDMESEWVEQDEPGIYITIRALPDGNRELRRVRFSRDKFGETHARLWWEQNRAR 370

[Close]

BLAST of Spo03180.1 vs. ExPASy Swiss-Prot
Match: BRXL1_ORYSJ (Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica GN=BRXL1 PE=2 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 2.000e-89
Identity = 220/424 (51.89%), Postives = 260/424 (61.32%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVH------TPNSKQAIKTLTSQIKGIALKA 60
           MLTCIA  KQ  G            DD           TP+++QAIK LT+QIK +ALKA
Sbjct: 1   MLTCIACSKQLAGGAPPLREQSDDADDAAVARGAGECATPSTRQAIKALTAQIKDMALKA 60

Query: 61  SGAYK-CNPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATP 120
           SGAY+ C PC+  +S  P          +  +++GS++     A++R      S   ATP
Sbjct: 61  SGAYRHCKPCAGSSSSSPAAGARRHHPYHAYADSGSDRFH--YAYRRA----GSGGDATP 120

Query: 121 RWGKEMEARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVS 180
                + AR   L+ G E          G   D     E+DE KEWVAQVEPGVLITF+S
Sbjct: 121 ----SVSARTDFLA-GDEEEEEEEEEEEGTTADGS---EDDEAKEWVAQVEPGVLITFLS 180

Query: 181 LPRGGNDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDN 240
           LP GGNDLKRIRF+RE+FNKWQAQ+WW +NYEK+MELYNVQR ++   PLPT P+SED  
Sbjct: 181 LPEGGNDLKRIRFSREIFNKWQAQRWWAENYEKVMELYNVQRFNQQT-PLPTTPKSED-- 240

Query: 241 SSMNSKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGM--GYSSSDSFEQ-------HSK 300
                   ES   D P TPPL+ E +P  L+R ++ G   GY   DS          H +
Sbjct: 241 --------ESLKEDIPATPPLNSERLPHTLHRSLTGGRTTGYGQPDSLGHQHNLGNGHRQ 300

Query: 301 QSRQ-------YESSGLASTPKHSNISGVTAKTELSSMDESLRSTSS-REGDRSGELSIS 360
           Q          Y S GLASTPK S+ISG  AKTE SSMD S+RS+SS  E DRS ELS+S
Sbjct: 301 QHHHCYTGHQCYGSVGLASTPKLSSISG--AKTETSSMDASMRSSSSPEEVDRSRELSVS 360

Query: 361 --NGSDMESEWVEEDEPGVYITIRALPGGRRELRRVRFSREKFGEMHARVWWEENRARIH 399
             N SD E EWVEEDEPGVYITIRALPGG RELRRVRFSREKF EMHAR+WWEENRARIH
Sbjct: 361 VSNASDQEREWVEEDEPGVYITIRALPGGIRELRRVRFSREKFSEMHARLWWEENRARIH 397

[Close]

BLAST of Spo03180.1 vs. ExPASy Swiss-Prot
Match: BRX_ARATH (Protein BREVIS RADIX OS=Arabidopsis thaliana GN=BRX PE=1 SV=2)

HSP 1 Score: 233.8 bits (595), Expect = 3.300e-60
Identity = 165/410 (40.24%), Postives = 214/410 (52.20%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYK- 60
           M +CIA  K   G    H              TPN+K+A+K+LT QIK +ALK SGAYK 
Sbjct: 1   MFSCIACTKADGGEEVEHGARGGT--------TPNTKEAVKSLTIQIKDMALKFSGAYKQ 60

Query: 61  CNPCSHPNSGGPTGSGSGQLK----SYTESETGSEKLKPPRAFKRTLSANSSSSAATPRW 120
           C PC        TGS S  LK    S+ + +  SE +  P            S+ +TP W
Sbjct: 61  CKPC--------TGSSSSPLKKGHRSFPDYDNASEGVPYPFM--------GGSAGSTPAW 120

Query: 121 GKEMEARLKGLSVGGEVTPVMS---VSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFV 180
                +      +  + T +      S S +  D  V++++D PKEW+AQVEPGV ITF 
Sbjct: 121 DFTNSSHHPAGRLESKFTSIYGNDRESISAQSCD--VVLDDDGPKEWMAQVEPGVHITFA 180

Query: 181 SLPRGGNDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDD 240
           SLP GGNDLKRIRF+REMF+KWQAQ+WW +NY+KI+ELYNVQR +R A   P    +  D
Sbjct: 181 SLPTGGNDLKRIRFSREMFDKWQAQRWWGENYDKIVELYNVQRFNRQALQTP----ARSD 240

Query: 241 NSSMNSKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQYESS 300
           + S                                     YS  DS  +    + ++   
Sbjct: 241 DQSQRDST--------------------------------YSKMDSARESKDWTPRHNFR 300

Query: 301 GLASTPKH----SNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEE 360
              S P H    S+  G  +      MD +  +TSSR+   S    +SN S+M++EW+EE
Sbjct: 301 PPGSVPHHFYGGSSNYGPGSYHGGPPMDAARTTTSSRDDPPS----MSNASEMQAEWIEE 344

Query: 361 DEPGVYITIRALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
           DEPGVYITIR L  G RELRRVRFSRE+FGE+HA+ WWE+NR RI  QYL
Sbjct: 361 DEPGVYITIRQLSDGTRELRRVRFSRERFGEVHAKTWWEQNRERIQTQYL 344

[Close]

BLAST of Spo03180.1 vs. TAIR (Arabidopsis)
Match: AT5G20540.1 (BREVIS RADIX-like 4)

HSP 1 Score: 416.4 bits (1069), Expect = 2.000e-116
Identity = 244/412 (59.22%), Postives = 296/412 (71.84%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYK- 60
           MLTCIAR K+    +S       Q DDPDS +        K+LTSQ+K +ALKASGAY+ 
Sbjct: 1   MLTCIARSKRAGDESSG------QPDDPDSKNA-------KSLTSQLKDMALKASGAYRH 60

Query: 61  CNPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAAT------- 120
           C PC+        G G G +K+   S +     +  + FK     ++SS  AT       
Sbjct: 61  CTPCTAAQG---QGQGQGPIKNNPSSSSVKSDFESDQRFKMLYGRSNSSITATAAVAATQ 120

Query: 121 ---PR-WGKEMEARLKGLSVGGEVTPVMSVSASGR-RLDPVVLVEEDEPKEWVAQVEPGV 180
              PR WGKEMEARLKG+S  GE TP    SASGR R+DP+V VEE EPKEWVAQVEPGV
Sbjct: 121 QQQPRVWGKEMEARLKGIS-SGEATPK---SASGRNRVDPIVFVEEKEPKEWVAQVEPGV 180

Query: 181 LITFVSLPRGGNDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPP 240
           LITFVSLP GGNDLKRIRF+R+MFNK QAQ+WW DNY+K+MELYNVQ+LSR AFPLPTPP
Sbjct: 181 LITFVSLPGGGNDLKRIRFSRDMFNKLQAQRWWADNYDKVMELYNVQKLSRQAFPLPTPP 240

Query: 241 RSEDDNSSMNSKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSR 300
           RSED+N+      +E    D+P TPPL+KE +PR ++R   +   YSSSDS + +S QS+
Sbjct: 241 RSEDENAK-----VEYHPEDTPATPPLNKERLPRTIHRPPGLA-AYSSSDSLDHNSMQSQ 300

Query: 301 QYESSGLA-STPKHSNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWV 360
           Q+  SGL  STPK S+IS   AKTE SS+D S+RS+SSR+ DRS E+S+SN SD+++EWV
Sbjct: 301 QFYDSGLLNSTPKVSSIS--VAKTETSSIDASIRSSSSRDADRSEEMSVSNASDVDNEWV 360

Query: 361 EEDEPGVYITIRALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
           E+DEPGVYITI+ LPGG+RELRRVRFSRE+FGEMHAR+WWEENRARIHEQYL
Sbjct: 361 EQDEPGVYITIKVLPGGKRELRRVRFSRERFGEMHARLWWEENRARIHEQYL 384

[Close]

BLAST of Spo03180.1 vs. TAIR (Arabidopsis)
Match: AT3G14000.1 (DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein)

HSP 1 Score: 363.6 bits (932), Expect = 1.500e-100
Identity = 228/408 (55.88%), Postives = 278/408 (68.14%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSV-HTPNSKQAIKTLTSQIKGIALKASGAYK 60
           MLTCIA  KQ   +N      +   ++ D V  TP SKQ IK+LTSQIK +A+KASGAYK
Sbjct: 1   MLTCIACTKQLNTNNGGSKKQEEDEEEEDRVIETPRSKQ-IKSLTSQIKDMAVKASGAYK 60

Query: 61  -CNPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATPR-WGK 120
            C PCS         S   + +SY +S+  S   +   A+KR     + S ++TP+  GK
Sbjct: 61  SCKPCSG-------SSNQNKNRSYADSDVASNSGRFRYAYKR-----AGSGSSTPKILGK 120

Query: 121 EMEARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRG 180
           EME+RLKG  + GE TP    S SGR    V + EEDE KEWVAQVEPGVLITFVSLP G
Sbjct: 121 EMESRLKGF-LSGEGTPE---SMSGRTESTVFMEEEDELKEWVAQVEPGVLITFVSLPEG 180

Query: 181 GNDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDDNSSMN 240
           GND+KRIRF+REMF+KWQAQKWW +N++K+MELYNVQ+ ++ + PLPTPPRSED +S + 
Sbjct: 181 GNDMKRIRFSREMFDKWQAQKWWAENFDKVMELYNVQQFNQQSVPLPTPPRSEDGSSRIQ 240

Query: 241 SKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQH---SKQSRQYESSGL 300
           S        + P TPPL+KE          S G GY+SS S         QSR ++SSGL
Sbjct: 241 STK------NGPATPPLNKE---------CSRGKGYASSGSLAHQPTTQTQSRHHDSSGL 300

Query: 301 ASTPKHSNISGVTAKTELSSMDESLRSTSSR---EGDRSG-ELSISNGSDMESEWVEEDE 360
           A+TPK S+ISG   KTE SS+DES RS+ SR   E D SG ELS+SN SD+E+EWVE+DE
Sbjct: 301 ATTPKLSSISG--TKTETSSVDESARSSFSREEEEADHSGEELSVSNASDIETEWVEQDE 360

Query: 361 PGVYITIRALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
            GVYITIRALP G RELRRVRFSREKFGE +AR+WWE+NRARI +QYL
Sbjct: 361 AGVYITIRALPDGTRELRRVRFSREKFGETNARLWWEQNRARIQQQYL 374

[Close]

BLAST of Spo03180.1 vs. TAIR (Arabidopsis)
Match: AT1G54180.1 (BREVIS RADIX-like 3)

HSP 1 Score: 333.2 bits (853), Expect = 2.200e-91
Identity = 217/426 (50.94%), Postives = 268/426 (62.91%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYK- 60
           MLTCIA  KQ   +N    + + + ++   + TP +KQAIK+LTSQ+K +A+KASGAYK 
Sbjct: 1   MLTCIACTKQLNTNNGG--STREEDEEHGVIGTPRTKQAIKSLTSQLKDMAVKASGAYKN 60

Query: 61  CNPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATPR-WGKE 120
           C PCS     G T     Q ++Y +S+  S+  +   +++R  +A S     TP+ WG E
Sbjct: 61  CKPCS-----GTTNRN--QNRNYADSDAASDSGRFHYSYQRAGTATS-----TPKIWGNE 120

Query: 121 MEARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFVSLPRGG 180
           ME+RLKG+S   E TP    S SGR  + +V +E+DE KEWVAQVEPGVLITFVSLP+GG
Sbjct: 121 MESRLKGIS-SEEGTPT---SMSGRT-ESIVFMEDDEVKEWVAQVEPGVLITFVSLPQGG 180

Query: 181 NDLKRIRFN--------------------------REMFNKWQAQKWWTDNYEKIMELYN 240
           NDLKRIRF                           REMFNKWQAQKWW +N+EK+MELYN
Sbjct: 181 NDLKRIRFRSTRFPYYRDQLLLWCRQGWVFWPQNCREMFNKWQAQKWWVENFEKVMELYN 240

Query: 241 VQRLSRNAFPLPTPPRSEDDNSSMNSKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMG 300
           VQ  ++ + PL TPP SED  S +       S+ DSPVTPPL +E   RN+         
Sbjct: 241 VQ-FNQQSVPLQTPPVSEDGGSQI------QSVKDSPVTPPLERERPHRNI--------- 300

Query: 301 YSSSDSFEQHSKQSRQYESSGLASTPKHSNISGVTAKTELSSMDESLRSTSSREGDRSGE 360
                             SSG ASTPK S+ISG   KTE SS+D S RS+S    DRS E
Sbjct: 301 ----------------PGSSGFASTPKLSSISG--TKTETSSIDGSARSSSV---DRSEE 360

Query: 361 LSISNGSDMESEWVEEDEPGVYITIRALPGGRRELRRVRFSREKFGEMHARVWWEENRAR 399
           +S+SN SDMESEWVE+DEPG+YITIRALP G RELRRVRFSR+KFGE HAR+WWE+NRAR
Sbjct: 361 VSVSNASDMESEWVEQDEPGIYITIRALPDGNRELRRVRFSRDKFGETHARLWWEQNRAR 370

[Close]

BLAST of Spo03180.1 vs. TAIR (Arabidopsis)
Match: AT1G31880.1 (DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein)

HSP 1 Score: 233.8 bits (595), Expect = 1.800e-61
Identity = 165/410 (40.24%), Postives = 214/410 (52.20%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYK- 60
           M +CIA  K   G    H              TPN+K+A+K+LT QIK +ALK SGAYK 
Sbjct: 1   MFSCIACTKADGGEEVEHGARGGT--------TPNTKEAVKSLTIQIKDMALKFSGAYKQ 60

Query: 61  CNPCSHPNSGGPTGSGSGQLK----SYTESETGSEKLKPPRAFKRTLSANSSSSAATPRW 120
           C PC        TGS S  LK    S+ + +  SE +  P            S+ +TP W
Sbjct: 61  CKPC--------TGSSSSPLKKGHRSFPDYDNASEGVPYPFM--------GGSAGSTPAW 120

Query: 121 GKEMEARLKGLSVGGEVTPVMS---VSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITFV 180
                +      +  + T +      S S +  D  V++++D PKEW+AQVEPGV ITF 
Sbjct: 121 DFTNSSHHPAGRLESKFTSIYGNDRESISAQSCD--VVLDDDGPKEWMAQVEPGVHITFA 180

Query: 181 SLPRGGNDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSEDD 240
           SLP GGNDLKRIRF+REMF+KWQAQ+WW +NY+KI+ELYNVQR +R A   P    +  D
Sbjct: 181 SLPTGGNDLKRIRFSREMFDKWQAQRWWGENYDKIVELYNVQRFNRQALQTP----ARSD 240

Query: 241 NSSMNSKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQYESS 300
           + S                                     YS  DS  +    + ++   
Sbjct: 241 DQSQRDST--------------------------------YSKMDSARESKDWTPRHNFR 300

Query: 301 GLASTPKH----SNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEE 360
              S P H    S+  G  +      MD +  +TSSR+   S    +SN S+M++EW+EE
Sbjct: 301 PPGSVPHHFYGGSSNYGPGSYHGGPPMDAARTTTSSRDDPPS----MSNASEMQAEWIEE 344

Query: 361 DEPGVYITIRALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
           DEPGVYITIR L  G RELRRVRFSRE+FGE+HA+ WWE+NR RI  QYL
Sbjct: 361 DEPGVYITIRQLSDGTRELRRVRFSRERFGEVHAKTWWEQNRERIQTQYL 344

[Close]

BLAST of Spo03180.1 vs. TAIR (Arabidopsis)
Match: AT2G35600.1 (BREVIS RADIX-like 1)

HSP 1 Score: 194.5 bits (493), Expect = 1.200e-49
Identity = 150/407 (36.86%), Postives = 204/407 (50.12%), Query Frame = 1


		  
Query: 1   MLTCIARPKQQQGHNSHHHNHQHQHDDPDSVHTPNSKQAIKTLTSQIKGIALKASGAYKC 60
           M TCI   K            + + D+     TPN+K+A+K+LT+QIK +A K SG    
Sbjct: 1   MFTCINCTKMAD------RGEEDEEDEARGSTTPNTKEAVKSLTTQIKDMASKFSG---- 60

Query: 61  NPCSHPNSGGPTGSGSGQLKSYTESETGSEKLKPPRAFKRTLSANSSSSAATPRW----- 120
              SH  S    GS S  L+ + + +T SE +  P            S+++TP W     
Sbjct: 61  ---SHKQSKPTPGSSSSNLRKFPDFDTASESVPYPYP--------GGSTSSTPAWDLPRS 120

Query: 121 ----GKEMEARLKGLSVGGEVTPVMSVSASGRRLDPVVLVEEDEPKEWVAQVEPGVLITF 180
                   ++R   +  GGE   + + S         V++E+DEPKEW+AQVEPGV ITF
Sbjct: 121 SYHQSGRPDSRFTSM-YGGERESISAQSCD-------VVLEDDEPKEWMAQVEPGVHITF 180

Query: 181 VSLPRGGNDLKRIRFNREMFNKWQAQKWWTDNYEKIMELYNVQRLSRNAFPLPTPPRSED 240
           VSLP GGNDLKRIRF+RE+F+KWQAQ+WW                             E+
Sbjct: 181 VSLPSGGNDLKRIRFSREVFDKWQAQRWW----------------------------GEN 240

Query: 241 DNSSMNSKMMESSIGDSPVTPPLSKESIPRNLYRGMSIGMGYSSSDSFEQHSKQSRQYES 300
            +  +    ++     +  TP  S++   R+     S      S+      +++   +  
Sbjct: 241 YDRIVELYNVQRFNRQALQTPGRSEDQSQRD-----STYTRIDSARESRDWTQRDNNFRP 300

Query: 301 SGLASTPKHSNISGVTAKTELSSMDESLRSTSSREGDRSGELSISNGSDMESEWVEEDEP 360
            G  S P H    G         MD +  +TSSR+   S    +SN S+M+ EWVEEDEP
Sbjct: 301 PG-GSVPHH--FYG-------PPMDAARITTSSRDEPPS----MSNASEMQGEWVEEDEP 331

Query: 361 GVYITIRALPGGRRELRRVRFSREKFGEMHARVWWEENRARIHEQYL 399
           GVYITIR LP G RELRRVRFSRE+FGE+HA+ WWE+NR RI  QYL
Sbjct: 361 GVYITIRQLPDGTRELRRVRFSRERFGEVHAKTWWEQNRDRIQTQYL 331

The following BLAST results are available for this feature:

BLAST of Spo03180.1 vs. NCBI nr
BLAST of Spo03180.1 vs. UniProtKB/TrEMBL
BLAST of Spo03180.1 vs. ExPASy Swiss-Prot
BLAST of Spo03180.1 vs. TAIR (Arabidopsis)

BLAST of Spo03180.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902161449\|gb\|KNA06578.1\|	3.9e-223	99.7	hypothetical protein SOVF_1797...	[more]
gi\|731372806\|ref\|XP_010666454.1\|	1.2e-190	88.0	PREDICTED: protein Brevis radi...	[more]
gi\|225444796\|ref\|XP_002280093.1\|	1.9e-129	65.5	PREDICTED: protein Brevis radi...	[more]
gi\|764510148\|ref\|XP_011460503.1\|	5.6e-129	66.3	PREDICTED: protein Brevis radi...	[more]
gi\|566176459\|ref\|XP_002309199.2\|	1.3e-128	65.7	zinc finger family protein [Po...	[more]

BLAST of Spo03180.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QIP3_SPIOL	2.7e-223	99.7	Uncharacterized protein OS=Spi...	[more]
A0A0J8B828_BETVU	8.0e-191	88.0	Uncharacterized protein OS=Bet...	[more]
F6HGU3_VITVI	1.4e-129	65.5	Putative uncharacterized prote...	[more]
B9HDV5_POPTR	8.8e-129	65.7	Zinc finger family protein OS=...	[more]
A0A067F9G8_CITSI	2.5e-128	64.8	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo03180.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
BRXL4_ARATH	3.5e-115	59.2	Protein Brevis radix-like 4 OS...	[more]
BRXL2_ARATH	2.7e-99	55.8	Protein Brevis radix-like 2 OS...	[more]
BRXL3_ARATH	3.9e-90	50.9	Protein Brevis radix-like 3 OS...	[more]
BRXL1_ORYSJ	2.0e-89	51.8	Protein Brevis radix-like 1 OS...	[more]
BRX_ARATH	3.3e-60	40.2	Protein BREVIS RADIX OS=Arabid...	[more]

BLAST of Spo03180.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G20540.1	2.0e-116	59.2	BREVIS RADIX-like 4	[more]
AT3G14000.1	1.5e-100	55.8	DZC (Disease resistance/zinc f...	[more]
AT1G54180.1	2.2e-91	50.9	BREVIS RADIX-like 3	[more]
AT1G31880.1	1.8e-61	40.2	DZC (Disease resistance/zinc f...	[more]
AT2G35600.1	1.2e-49	36.8	BREVIS RADIX-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013591	Brevis radix (BRX) domain	PFAM	PF08381	BRX	coord: 157..211 score: 2.4E-26coord: 342..397 score: 4.1
IPR013591	Brevis radix (BRX) domain	PROFILE	PS51514	BRX	coord: 157..212 score: 30.548coord: 343..398 score: 34
IPR027988	Transcription factor BREVIS RADIX, N-terminal domain	PFAM	PF13713	BRX_N	coord: 30..63 score: 6.4
None	No IPR available	PANTHER	PTHR22870	REGULATOR OF CHROMOSOME CONDENSATION	coord: 236..397 score: 4.1
None	No IPR available	PANTHER	PTHR22870:SF166	PROTEIN RCC2	coord: 236..397 score: 4.1