Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGAATCTGGGATGAATCACCAACATGCTAGCCGGAAAGAGAGGGGTGAAGGGTTAATTCATAAGAAGATAGTGCAATTTACAATCATCTTTGTTTGCATCTGGTTGATTTACCAGTTTTGTCACTTACTTGGTGGCGTTTATGCAAGAGATCGAGTTAATGGCTATGAGAAGGTCGATATGAAGATCCAAAACGAGCGTATCGGGAAACTTTTTGGGCGTAAAGGGGGGCTCGGATCATCTCACAATGCTGAGGGGGTGGAGTTGTATGGAGTGGATATGATTGGAGCAGCTGAGAGGATAAAACATATAGCTGAAGACAATGAAGAGAGCGATGTTGGAAGCAGTTTTCCTGAAGGGAATGATGATGAAGACGAAGAGCCATCTCTTGATGATTATAATAAGGCCTTAGATTTGACAGATTTGGGAGAAATTGGGGAGAAAATACAGGAAAATAAGACAAATGCTTCAACCAGGAATGAAGGTAGCCCACTGATGAAGGCAAGTACAACTGAAGTTGAGTCCCTAGTTAGTTTTGGTGCTGTGATTTTGAAAAAGAATGATAAAGAATATGAAGTTTTTCGGTTTAATGATGAGACTGGGGTTCCAAAATATGAGTCTGCACCCTCCAGGAGAAGCGATATCCAGGTTGAGAATTCGCTTAAAGGAAGGTTGGTGAATTCGAGCAATTGCCAGAAACTTTCTAAACAGAAAAATGCTGAAAAACAAAGGCTGAACAAGTCTGAAGAGTTGAAAGACCTGACAGTGGTTGAATCTGGAAAAGGAAGCATACGAGAACTTCTTCAGAATGAAGGTAGCTCATCAGTAGCTGCAATATTGTTTGTCAGATCTCAGTGACAGTTGATAATGTAAAATTCTCTTTACTCAAAGAGCTGTGTGTATAGAAAATGAGATACCATTCTTGTGTATGTCATTGTTTCACTTTGCTTAGACAGTCAGTCAGTAGTCTCTTGTGTAGTGTAGTGTGTCTTACAGTTTTGACTCGCGAACTAAAATCTAAATTGCAGATAGTTTCTTATCTTAAAAATAAATATCCATCCAGTTTTTTTTGGGTTTTTGCAAATCTATAAAGCAATGATTTCCACTTAGCCAGACACTTCCTCTTTGTGGATGGCTTCTGGAGCTTGTTTTCAGGCTACTTTTCGAAGCAACACAATTTATGTTATTCTCGGTCATGGATTTGGCTTCTACTCTAAGCTCTCCAACTGTATTTTAGGTTGTTAGGTACTGAAGCACATTAAATCTGTCACATCTGTCACCTAGCTTTCTGCAAGTAGATACCATTAGTTAATGCTGGTAAGGGACATATTTGTTCCCTATCAGGTGGTAGGGCAGAGTAATTACCGTCCGGTATATACAGTCCACAAGTGCAAGCAGTGGTAGGTGTATCAAAGAGATATCAACATCTCATCAGATTACATATCTCTCAACGGAAAACTCGTGGAAGTGATCTTCATTCCTGATGTCAAATATGCCAGACTCTTTAGGATTTGGCTTATAAATAGACACTTAACATAGCTCATTTTAATTACCTAGCTTCAAACTAAGTTTTACTTTTTGCTGAAAAAGGTATGGAAAGTGTTAGCAGTCACAAAAAATGGCAAGGAAAGGCACGCGTAGAACTAGCTGGTGTGAAGGCTGAAGAAGTTTGGCCTTTCTTGGCAGACTTCTGCGGCCTAAACAAGTGGTTTCCAACTCTTAGCACATGCATTAGGGTAGAGGGTGTCGAGGGTCAGCCTGGATGTGTTCGCTACTGTGCTGGGTTTAAGACCCACATAGAGCATGCCAATGAGAACCATGTGAACTGGACTAAGCAAAAATTGCTGTCCATTGATCCAGATAACATGACCTTTAGCTACTCGATCATAGATGGGAATGTCGGGTTCAGCTCATATGTGTCCAAGGTGAGAGTATTGCTGCAGGTAGATGGGTGTGTTATTGAATGGGATTACGAGGTTGAGCCAGTGGAAGGGTGGAAACCCAAGGATTTGGATGAGTTTATTGGTAAAGGGTTGAAAGTTATGGCCAAACGGATGGAAGAAGCTCTCAAAGGTCGTGCTATGAACTAG ATGAAAGAATCTGGGATGAATCACCAACATGCTAGCCGGAAAGAGAGGGGTGAAGGGTTAATTCATAAGAAGATAGTGCAATTTACAATCATCTTTGTTTGCATCTGGTTGATTTACCAGTTTTGTCACTTACTTGGTGGCGTTTATGCAAGAGATCGAGTTAATGGCTATGAGAAGGTCGATATGAAGATCCAAAACGAGCGTATCGGGAAACTTTTTGGGCGTAAAGGGGGGCTCGGATCATCTCACAATGCTGAGGGGGTGGAGTTGTATGGAGTGGATATGATTGGAGCAGCTGAGAGGATAAAACATATAGCTGAAGACAATGAAGAGAGCGATGTTGGAAGCAGTTTTCCTGAAGGGAATGATGATGAAGACGAAGAGCCATCTCTTGATGATTATAATAAGGCCTTAGATTTGACAGATTTGGGAGAAATTGGGGAGAAAATACAGGAAAATAAGACAAATGCTTCAACCAGGAATGAAGGTAGCCCACTGATGAAGGCAAGTACAACTGAAGTTGAGTCCCTAGTTAGTTTTGGTGCTGTGATTTTGAAAAAGAATGATAAAGAATATGAAGTTTTTCGGTTTAATGATGAGACTGGGGTTCCAAAATATGAGTCTGCACCCTCCAGGAGAAGCGATATCCAGGTTGAGAATTCGCTTAAAGGAAGGTTGGTGAATTCGAGCAATTGCCAGAAACTTTCTAAACAGAAAAATGCTGAAAAACAAAGGCTGAACAAGTCTGAAGAGTTGAAAGACCTGACAGTGGTTGAATCTGGAAAAGGAAGCATACGAGAACTTCTTCAGAATGAAGGTATGGAAAGTGTTAGCAGTCACAAAAAATGGCAAGGAAAGGCACGCGTAGAACTAGCTGGTGTGAAGGCTGAAGAAGTTTGGCCTTTCTTGGCAGACTTCTGCGGCCTAAACAAGTGGTTTCCAACTCTTAGCACATGCATTAGGGTAGAGGGTGTCGAGGGTCAGCCTGGATGTGTTCGCTACTGTGCTGGGTTTAAGACCCACATAGAGCATGCCAATGAGAACCATGTGAACTGGACTAAGCAAAAATTGCTGTCCATTGATCCAGATAACATGACCTTTAGCTACTCGATCATAGATGGGAATGTCGGGTTCAGCTCATATGTGTCCAAGGTGAGAGTATTGCTGCAGGTAGATGGGTGTGTTATTGAATGGGATTACGAGGTTGAGCCAGTGGAAGGGTGGAAACCCAAGGATTTGGATGAGTTTATTGGTAAAGGGTTGAAAGTTATGGCCAAACGGATGGAAGAAGCTCTCAAAGGTCGTGCTATGAACTAG ATGAAAGAATCTGGGATGAATCACCAACATGCTAGCCGGAAAGAGAGGGGTGAAGGGTTAATTCATAAGAAGATAGTGCAATTTACAATCATCTTTGTTTGCATCTGGTTGATTTACCAGTTTTGTCACTTACTTGGTGGCGTTTATGCAAGAGATCGAGTTAATGGCTATGAGAAGGTCGATATGAAGATCCAAAACGAGCGTATCGGGAAACTTTTTGGGCGTAAAGGGGGGCTCGGATCATCTCACAATGCTGAGGGGGTGGAGTTGTATGGAGTGGATATGATTGGAGCAGCTGAGAGGATAAAACATATAGCTGAAGACAATGAAGAGAGCGATGTTGGAAGCAGTTTTCCTGAAGGGAATGATGATGAAGACGAAGAGCCATCTCTTGATGATTATAATAAGGCCTTAGATTTGACAGATTTGGGAGAAATTGGGGAGAAAATACAGGAAAATAAGACAAATGCTTCAACCAGGAATGAAGGTAGCCCACTGATGAAGGCAAGTACAACTGAAGTTGAGTCCCTAGTTAGTTTTGGTGCTGTGATTTTGAAAAAGAATGATAAAGAATATGAAGTTTTTCGGTTTAATGATGAGACTGGGGTTCCAAAATATGAGTCTGCACCCTCCAGGAGAAGCGATATCCAGGTTGAGAATTCGCTTAAAGGAAGGTTGGTGAATTCGAGCAATTGCCAGAAACTTTCTAAACAGAAAAATGCTGAAAAACAAAGGCTGAACAAGTCTGAAGAGTTGAAAGACCTGACAGTGGTTGAATCTGGAAAAGGAAGCATACGAGAACTTCTTCAGAATGAAGGTATGGAAAGTGTTAGCAGTCACAAAAAATGGCAAGGAAAGGCACGCGTAGAACTAGCTGGTGTGAAGGCTGAAGAAGTTTGGCCTTTCTTGGCAGACTTCTGCGGCCTAAACAAGTGGTTTCCAACTCTTAGCACATGCATTAGGGTAGAGGGTGTCGAGGGTCAGCCTGGATGTGTTCGCTACTGTGCTGGGTTTAAGACCCACATAGAGCATGCCAATGAGAACCATGTGAACTGGACTAAGCAAAAATTGCTGTCCATTGATCCAGATAACATGACCTTTAGCTACTCGATCATAGATGGGAATGTCGGGTTCAGCTCATATGTGTCCAAGGTGAGAGTATTGCTGCAGGTAGATGGGTGTGTTATTGAATGGGATTACGAGGTTGAGCCAGTGGAAGGGTGGAAACCCAAGGATTTGGATGAGTTTATTGGTAAAGGGTTGAAAGTTATGGCCAAACGGATGGAAGAAGCTCTCAAAGGTCGTGCTATGAACTAG MKESGMNHQHASRKERGEGLIHKKIVQFTIIFVCIWLIYQFCHLLGGVYARDRVNGYEKVDMKIQNERIGKLFGRKGGLGSSHNAEGVELYGVDMIGAAERIKHIAEDNEESDVGSSFPEGNDDEDEEPSLDDYNKALDLTDLGEIGEKIQENKTNASTRNEGSPLMKASTTEVESLVSFGAVILKKNDKEYEVFRFNDETGVPKYESAPSRRSDIQVENSLKGRLVNSSNCQKLSKQKNAEKQRLNKSEELKDLTVVESGKGSIRELLQNEGMESVSSHKKWQGKARVELAGVKAEEVWPFLADFCGLNKWFPTLSTCIRVEGVEGQPGCVRYCAGFKTHIEHANENHVNWTKQKLLSIDPDNMTFSYSIIDGNVGFSSYVSKVRVLLQVDGCVIEWDYEVEPVEGWKPKDLDEFIGKGLKVMAKRMEEALKGRAMN Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo02639.1 vs. NCBI nr
Match: gi|902164306|gb|KNA06954.1| (hypothetical protein SOVF_176300, partial [Spinacia oleracea]) HSP 1 Score: 449.1 bits (1154), Expect = 8.700e-123 Identity = 235/239 (98.33%), Postives = 237/239 (99.16%), Query Frame = 1
BLAST of Spo02639.1 vs. NCBI nr
Match: gi|902164307|gb|KNA06955.1| (hypothetical protein SOVF_176310 [Spinacia oleracea]) HSP 1 Score: 352.1 bits (902), Expect = 1.400e-93 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1
BLAST of Spo02639.1 vs. NCBI nr
Match: gi|731353898|ref|XP_010688299.1| (PREDICTED: lachrymatory-factor synthase-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 280.8 bits (717), Expect = 4.100e-72 Identity = 125/165 (75.76%), Postives = 142/165 (86.06%), Query Frame = 1
BLAST of Spo02639.1 vs. NCBI nr
Match: gi|225445116|ref|XP_002283822.1| (PREDICTED: lachrymatory-factor synthase-like [Vitis vinifera]) HSP 1 Score: 237.7 bits (605), Expect = 4.000e-59 Identity = 111/152 (73.03%), Postives = 125/152 (82.24%), Query Frame = 1
BLAST of Spo02639.1 vs. NCBI nr
Match: gi|702304795|ref|XP_010049633.1| (PREDICTED: lachrymatory-factor synthase-like [Eucalyptus grandis]) HSP 1 Score: 233.4 bits (594), Expect = 7.500e-58 Identity = 108/168 (64.29%), Postives = 130/168 (77.38%), Query Frame = 1
BLAST of Spo02639.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QI79_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_176300 PE=4 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 6.000e-123 Identity = 235/239 (98.33%), Postives = 237/239 (99.16%), Query Frame = 1
BLAST of Spo02639.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QI85_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_176310 PE=4 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 1.000e-93 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1
BLAST of Spo02639.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BT53_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g197230 PE=4 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 2.800e-72 Identity = 125/165 (75.76%), Postives = 142/165 (86.06%), Query Frame = 1
BLAST of Spo02639.1 vs. UniProtKB/TrEMBL
Match: F6HGL5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g03250 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 2.800e-59 Identity = 111/152 (73.03%), Postives = 125/152 (82.24%), Query Frame = 1
BLAST of Spo02639.1 vs. UniProtKB/TrEMBL
Match: A0A059CWQ0_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_C03776 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 4.400e-57 Identity = 106/164 (64.63%), Postives = 127/164 (77.44%), Query Frame = 1
BLAST of Spo02639.1 vs. ExPASy Swiss-Prot
Match: LFS_ALLCE (Lachrymatory-factor synthase OS=Allium cepa GN=LFS PE=1 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.200e-17 Identity = 47/158 (29.75%), Postives = 77/158 (48.73%), Query Frame = 1
BLAST of Spo02639.1 vs. TAIR (Arabidopsis)
Match: AT2G25770.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 145.2 bits (365), Expect = 9.500e-35 Identity = 69/164 (42.07%), Postives = 101/164 (61.59%), Query Frame = 1
BLAST of Spo02639.1 vs. TAIR (Arabidopsis)
Match: AT4G32870.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 144.4 bits (363), Expect = 1.600e-34 Identity = 71/161 (44.10%), Postives = 100/161 (62.11%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02639.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02639.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02639.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo02639.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 2
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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