Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGCAGTGTTCAACAAGGAAGTAGCAAAGTGCCCAGAAGAGCTGAAGAATGCTGAATCATTGGGAAATGTGAAGGAAGATGCTTTGATTCAACAGTTTTCTTCAGTTCATCCAAATGCTCTTTCTGTTCATCTTGGAGATTCTGGGTTTATTGCCTTTTCATCTGATAAGCAAAACCCTCTCTTACCCAGGTAACTTCAATTCCACTTTAAAAATTCTTGATTTTTGTAACTTTTTTTTTAATCTGGGTGTGATTCTTTTGGAAGTTGAGAATCTGGGTTGAACTTATTTTCTTTAATGGTTGACTTATTTAGTGTATTAAATTCTTGGATTTTTTTAGTGGGTTTGTACAGTGATTTTTATGAATAATAAAAATGGCAGGAATTTGATTATTGTTGGATTAGTTTTCTTGAACAGGGTACTGATTATTTAGTTTGATTAAACTTCTGAAGTTCATCCATTGATAATCTGATTTCAGTAGATCGTTTTTTTCAGTGATATTGATTGTGCTTAATGATTGAAGCATATGAGTATGACATGAAAAAGGGATTTGGTCATCTATCTTAAATGCTTTACCCCCACTTCTACACATGATTCATGGACCATCTTATTATGCATTTGGATCATTTGTCGTTACTAAAATTGATCAGCAAGTTGGAAGAACTGGATTTCTTTGCTGAGTTGTGGTGATTAGCCACTTAAAACATTCCGATCACCGAATTTTGAATCTATATGTTAAAATGTTTAATTAATGAAGAAACAAGATTGAATCGGAATTATAATCGAGCATGTTTGATGTTTGTGCTTAATGATTGAAGCAATGTGTATGACACGAAAAAGGGATTTGGTTATCTATCTTAAATGCTCACATGATTCATGGACCATCTTATTATGCATTTGGATCATTTGTGATTACTAAAGTTGATCAGAAAGTTAGAAGAATTGAGTTCTTTGCTGAATTGGATAATTTTTGGTTACTAAAACAATCCGATCAGCAAATTTTTAACCTATATCCTTAATTAACACATGTTAGTAAGAAGTCGTGTTGTGAAGAAACAAGATTGAATCGGAATTATAATCAGGCATGTTTGATTTTTGTGAGAATCAAATCAAGAAGCTTGGAAGTCAGCCTAGGCTTTGACATAGTAATGGATTTATTGAGACCTGAATTAGGATCTGTGTTCACCTATCATAAATTCACTTAATATGGGTATATTCATTAACCTCAATCTGTGTGTAAGGATGTTATTGGTTCCAGTTAATTTCCGGATCTCAACCTTCCTAATTAACACCCCAATAAGACATATTGAGAGCAAGACCAAGGGGTCCTGTCTTAAGATTTTCTTCAAATGCCATGTTATTATTCCATTAATATTTAATAATTAAATCGTTGTTAAGCCTCCTTAAGATTCAATCAAATTTACCTCGACTTTTAAATTTATGTAAAATATTATTTTATTATTTAATTCAACTCACACATCAAGTCTTAAGTTGAGGTCTTAGTTTTTTCAAGACTCAATTTAAGACTTTGTTAAGACTGTTCCACTTCAATGCTACAATTCTCTGTGTCTGATCTTAAGACTGATGAGTCATATGCCACGCCAGCACAACTCAAGTCTTAAGACTTGTTGTTGATCATGCCCTTGAGCATCGATTCTGTTTCTGTCTTTCTCGTGTTATTGTTGGCCCTTTAGGTCAATTATGTGAAGTAAATGTTCAAGTTCAAAAGACTGATTTCTGAACATTTTTCTCCAGGCTTTTTGCAGTTGTGGATGACATATTCTGCTTGTTTCATGGACACATTGAGAACATACCTTCTCTAAAACAATTGTATGGATTAACTAAAACTGCGAATGAGGTTAGCATCATCATAGAGGCTTACCGTTCCTTGCGAGACAGAGGCAGCAGTCCTGCTGATCATGCATTGAGAAACATTGAAGGGAAATTTGCATTCGTGATTTATGACAGTTCGATAAAGACCACCTTCTTCTCTGTGGTAAGTGATTATAGCAGTATATCCCTCTGCTTTCTTTGGAAAAAAGATTTGTTGTTTGCTTAGTACATGTTTGGTATGAATCTAGAAAAGGAAACGGATTGAAACATTTAAGAAGGAGAAATGGTAATGTTAACATGTTTGGTATGAATCTAGGAAAGGAAATGGATTGGAAACATTTAAGAAGGAGAAATGGTAATGTTAAGTGTTATCATTATTTGTTGTTTGGTATACCTAAGGAAAACAATCCCTTAATTGTATCAAATTAGGGATACAAGGGATTGAGGAGGGTAACACTTTGTTACCACAAGGTTAAGAGAGGTAACAAATTGGTGGTAATCGTTAACCCTTTGGAAATGGAGTTGTGTCACCCATCTCTCATACCAAACAACAGGTAATGGAATTAGTTAATTGATTCCATTTCCAACACTTGAAAAGTGCTATACCAAACACGCTCTTAGTATGTAATCCTTTCTGTTGAACCTTACCTTTGTTTGGTTATTAAGGGATTGATTAATGATTAATATTTACCCTTTTTGATGATTTAGGATACTGATGGAAGTGTCCCTCTTTTCTGGGGAACGGATTCTGAAGATCACCTTGTTCTCTCTGACATTCCTGAGGTTATGCAGAACGCCTGTGGCAGATCATTTGCTCCATTTCCGAAAGGTATTGCCTTTCACAACCATATTATTAACTTGCAGAATACTCCATAGCATGCACTTATGCTCTACTGCCATTGGCTTACTAACTTGAGTGGGCCATTTTCATGCACTTGTATTATATCTCCAGTTCTCTAGTTCCTACTAATCATACCTCCTTATACAAAACAAACACAAAAATGAACACAAACTAATATTAGTGTCCTTTTTATTTTAGTTAATACTAAAGATTTCATATCTAGCCAGTTTTCTGATCAAACGTAACACAATAGGTATGGAAGAACAGGATATTAGTTTGTTGGTTCTATCGTTTAATAATGGCTTTGCTTTGAATATCTTACTGATCTGGTAATGGCTTTGCTTTGAGTATTACTTAGGTCTTGTTCTCTTCATCTGATTTGGTTCTGATTTTTCTAGTTTCTGGTCTGGTTTGATCTGATCTGGTCTGGTCTATATGTTTTCTGTGAGTGTTTTTTGATTTTTTTTGGTATGTCTGTTCTGATTTTCCTGGTCTTATGTAATAAGCAATAAGAATAAGGTGAAGAGAACAAAATCTTATTAGTGATAATAATGAGATGAGATAGTTTACGAATGACGAGCTACTAGAGCTAGACTCCATCAAATTCAACTCGAGTCCAAACTCAACCCTAATAGGCTAATAACTACTGAGAAAGCTGTATCATTATCACCCCTACACTTGATCTGGTTTGGTATGATCTGCTCTGAATGTTTTATGTGCGTGTTTTTTGTTTTTTCTGGTCTGATCTGATCTGATCTGGTAAGAATAAGAATAAGGTGAAGAGAACAATGCTTTATCTGACCATTTTGTTAATCTTCTACGGTGCAACTTGTGACTGTGTCCTCATTTCCTTGTTAAACAGGATTCTTTTTTACATCTGCTGGTGGCCTGAAAAGCTACGAGCATCCACGAAAAGTGCTAAAGGCAGTTCCATGGGTCGATAGCTCGGGCCAAGCTTGTGGATCAACTTTCATGGTGACTGAAGAATCTAACAAGGAGAACAAACAACTGGGAATCAAATCAGGAATGCCTAGAGTTGGCAGTGATGCTGATTGGTCCAAGAAAATATGAAAAATAAATCAACAAATCTTTTTTATTATCATACAATGCAAAGTCTTTTTCATTGTCCTTCACAACTAACTTCTACTCGTGTTTTTAATACCCAAGTGGGTTTTACTTCTTGGATGTTATATAAATTGCCTCATTGGCATTTCAGTTTTATCATAAAAATAGTACATATTTGAAAAAAAATAATGTCGACAATAATTGTATTTCACATATTTGTACATTTGTGTACATTTGTGTTCGATCATTGTCATGTAGTTGGAGTACTTCGTAGTTCTATGGTGGTTATTGATTGAGTGCTGGAAATGTGAAAACTGGTTGTAATCTATCTCTTGAACAGTTCATGTACAAGATGATTGCACGGTGAGATATGTGGAAAGGAAAATGTTCACAA ATGTTGGCAGTGTTCAACAAGGAAGTAGCAAAGTGCCCAGAAGAGCTGAAGAATGCTGAATCATTGGGAAATGTGAAGGAAGATGCTTTGATTCAACAGTTTTCTTCAGTTCATCCAAATGCTCTTTCTGTTCATCTTGGAGATTCTGGGTTTATTGCCTTTTCATCTGATAAGCAAAACCCTCTCTTACCCAGGCTTTTTGCAGTTGTGGATGACATATTCTGCTTGTTTCATGGACACATTGAGAACATACCTTCTCTAAAACAATTGTATGGATTAACTAAAACTGCGAATGAGGTTAGCATCATCATAGAGGCTTACCGTTCCTTGCGAGACAGAGGCAGCAGTCCTGCTGATCATGCATTGAGAAACATTGAAGGGAAATTTGCATTCGTGATTTATGACAGTTCGATAAAGACCACCTTCTTCTCTGTGGATACTGATGGAAGTGTCCCTCTTTTCTGGGGAACGGATTCTGAAGATCACCTTGTTCTCTCTGACATTCCTGAGGTTATGCAGAACGCCTGTGGCAGATCATTTGCTCCATTTCCGAAAGGATTCTTTTTTACATCTGCTGGTGGCCTGAAAAGCTACGAGCATCCACGAAAAGTGCTAAAGGCAGTTCCATGGGTCGATAGCTCGGGCCAAGCTTGTGGATCAACTTTCATGGTGACTGAAGAATCTAACAAGGAGAACAAACAACTGGGAATCAAATCAGGAATGCCTAGAGTTGGCAGTGATGCTGATTGGTCCAAGAAAATATGAAAAATAAATCAACAAATCTTTTTTATTATCATACAATGCAAAGTCTTTTTCATTGTCCTTCACAACTAACTTCTACTCGTGTTTTTAATACCCAAGTGGGTTTTACTTCTTGGATGTTATATAAATTGCCTCATTGGCATTTCAGTTTTATCATAAAAATAGTACATATTTGAAAAAAAATAATGTCGACAATAATTGTATTTCACATATTTGTACATTTGTGTACATTTGTGTTCGATCATTGTCATGTAGTTGGAGTACTTCGTAGTTCTATGGTGGTTATTGATTGAGTGCTGGAAATGTGAAAACTGGTTGTAATCTATCTCTTGAACAGTTCATGTACAAGATGATTGCACGGTGAGATATGTGGAAAGGAAAATGTTCACAA ATGTTGGCAGTGTTCAACAAGGAAGTAGCAAAGTGCCCAGAAGAGCTGAAGAATGCTGAATCATTGGGAAATGTGAAGGAAGATGCTTTGATTCAACAGTTTTCTTCAGTTCATCCAAATGCTCTTTCTGTTCATCTTGGAGATTCTGGGTTTATTGCCTTTTCATCTGATAAGCAAAACCCTCTCTTACCCAGGCTTTTTGCAGTTGTGGATGACATATTCTGCTTGTTTCATGGACACATTGAGAACATACCTTCTCTAAAACAATTGTATGGATTAACTAAAACTGCGAATGAGGTTAGCATCATCATAGAGGCTTACCGTTCCTTGCGAGACAGAGGCAGCAGTCCTGCTGATCATGCATTGAGAAACATTGAAGGGAAATTTGCATTCGTGATTTATGACAGTTCGATAAAGACCACCTTCTTCTCTGTGGATACTGATGGAAGTGTCCCTCTTTTCTGGGGAACGGATTCTGAAGATCACCTTGTTCTCTCTGACATTCCTGAGGTTATGCAGAACGCCTGTGGCAGATCATTTGCTCCATTTCCGAAAGGATTCTTTTTTACATCTGCTGGTGGCCTGAAAAGCTACGAGCATCCACGAAAAGTGCTAAAGGCAGTTCCATGGGTCGATAGCTCGGGCCAAGCTTGTGGATCAACTTTCATGGTGACTGAAGAATCTAACAAGGAGAACAAACAACTGGGAATCAAATCAGGAATGCCTAGAGTTGGCAGTGATGCTGATTGGTCCAAGAAAATATGA MLAVFNKEVAKCPEELKNAESLGNVKEDALIQQFSSVHPNALSVHLGDSGFIAFSSDKQNPLLPRLFAVVDDIFCLFHGHIENIPSLKQLYGLTKTANEVSIIIEAYRSLRDRGSSPADHALRNIEGKFAFVIYDSSIKTTFFSVDTDGSVPLFWGTDSEDHLVLSDIPEVMQNACGRSFAPFPKGFFFTSAGGLKSYEHPRKVLKAVPWVDSSGQACGSTFMVTEESNKENKQLGIKSGMPRVGSDADWSKKI Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo02272.1 vs. NCBI nr
Match: gi|902204736|gb|KNA14959.1| (hypothetical protein SOVF_102570 [Spinacia oleracea]) HSP 1 Score: 520.0 bits (1338), Expect = 2.300e-144 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 1
BLAST of Spo02272.1 vs. NCBI nr
Match: gi|731336207|ref|XP_010679131.1| (PREDICTED: stem-specific protein TSJT1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 442.6 bits (1137), Expect = 4.700e-121 Identity = 216/254 (85.04%), Postives = 230/254 (90.55%), Query Frame = 1
BLAST of Spo02272.1 vs. NCBI nr
Match: gi|902228854|gb|KNA21287.1| (hypothetical protein SOVF_044600 [Spinacia oleracea]) HSP 1 Score: 335.1 bits (858), Expect = 1.100e-88 Identity = 164/253 (64.82%), Postives = 194/253 (76.68%), Query Frame = 1
BLAST of Spo02272.1 vs. NCBI nr
Match: gi|658011541|ref|XP_008341016.1| (PREDICTED: stem-specific protein TSJT1 [Malus domestica]) HSP 1 Score: 333.6 bits (854), Expect = 3.100e-88 Identity = 162/253 (64.03%), Postives = 199/253 (78.66%), Query Frame = 1
BLAST of Spo02272.1 vs. NCBI nr
Match: gi|747086335|ref|XP_011090664.1| (PREDICTED: stem-specific protein TSJT1-like [Sesamum indicum]) HSP 1 Score: 333.2 bits (853), Expect = 4.000e-88 Identity = 162/255 (63.53%), Postives = 198/255 (77.65%), Query Frame = 1
BLAST of Spo02272.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R7K2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_102570 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 1.600e-144 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 1
BLAST of Spo02272.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C9I5_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g120050 PE=4 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 3.300e-121 Identity = 216/254 (85.04%), Postives = 230/254 (90.55%), Query Frame = 1
BLAST of Spo02272.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RR27_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_044600 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 7.400e-89 Identity = 164/253 (64.82%), Postives = 194/253 (76.68%), Query Frame = 1
BLAST of Spo02272.1 vs. UniProtKB/TrEMBL
Match: M5XMR8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010420mg PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 8.200e-88 Identity = 162/253 (64.03%), Postives = 196/253 (77.47%), Query Frame = 1
BLAST of Spo02272.1 vs. UniProtKB/TrEMBL
Match: B9RTJ4_RICCO (Stem-specific protein TSJT1, putative OS=Ricinus communis GN=RCOM_0910970 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 5.300e-87 Identity = 160/253 (63.24%), Postives = 193/253 (76.28%), Query Frame = 1
BLAST of Spo02272.1 vs. ExPASy Swiss-Prot
Match: TSJT1_TOBAC (Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.700e-25 Identity = 56/148 (37.84%), Postives = 89/148 (60.14%), Query Frame = 1
BLAST of Spo02272.1 vs. TAIR (Arabidopsis)
Match: AT3G22850.1 (Aluminium induced protein with YGL and LRDR motifs) HSP 1 Score: 313.2 bits (801), Expect = 1.500e-85 Identity = 153/256 (59.77%), Postives = 191/256 (74.61%), Query Frame = 1
BLAST of Spo02272.1 vs. TAIR (Arabidopsis)
Match: AT5G43830.1 (Aluminium induced protein with YGL and LRDR motifs) HSP 1 Score: 292.0 bits (746), Expect = 3.600e-79 Identity = 140/257 (54.47%), Postives = 182/257 (70.82%), Query Frame = 1
BLAST of Spo02272.1 vs. TAIR (Arabidopsis)
Match: AT3G15450.1 (Aluminium induced protein with YGL and LRDR motifs) HSP 1 Score: 201.8 bits (512), Expect = 4.900e-52 Identity = 106/257 (41.25%), Postives = 158/257 (61.48%), Query Frame = 1
BLAST of Spo02272.1 vs. TAIR (Arabidopsis)
Match: AT4G27450.1 (Aluminium induced protein with YGL and LRDR motifs) HSP 1 Score: 200.3 bits (508), Expect = 1.400e-51 Identity = 106/257 (41.25%), Postives = 154/257 (59.92%), Query Frame = 1
BLAST of Spo02272.1 vs. TAIR (Arabidopsis)
Match: AT5G19140.1 (Aluminium induced protein with YGL and LRDR motifs) HSP 1 Score: 196.1 bits (497), Expect = 2.700e-50 Identity = 95/228 (41.67%), Postives = 147/228 (64.47%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo02272.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo02272.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo02272.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo02272.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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