Spo01714.1 (mRNA) | SpinachBase

Overview


Name	Spo01714.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Protein CURVATURE THYLAKOID 1A, chloroplastic (Precursor)
Location	chr2 : 50918615 .. 50922584 (-)
Sequence length	860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCAACTTATGCAGGAACATCGTCTTCAATGGCGGCTGCAACAAGTGGGTTGCTTCCACGTGTCCACGCCAACCACTCCTCCCGCTTTATAGCGTTGCCTTATCTCCCTCCTCGTACCTCTACTTCTTCTTTGAAGATCTTCTCCAACAATTTGTCTGGTATTTTTCTTTGCGGCATTCTGTCGAACACTTGGCTATCATCCTTGTTCTTTACGTACCTTGTTTGCTGTTTTTAGCTTTGATGTTTATTGGGGTTTGCTTATTGGTTTAGTTAATATCAGTGCTCTAATTGATTGACTGATTGTGTTGAATTTTAAAGTTTTGTCTTTGAACAACAAGCGTTGACCACTGTTGATATCTCAGAGTACATTGTAATTTCATGGTTTTGTCTTATTTGTTTCTAATATGTTTCCCAATTAGATGTGGAATTATGTTATTTGTTGGGAATTGAATAAAACCCAGATTATATCATTGCAATTAATCATAGTAGACTTGAACATTTTGAGACACTTGTATAGTTGTATATGTAAGAAGACCATATAGTTAGATGATCATATATTAATGTGTGGGAATTGGTTAAAGATCACCAAATGGGTTGTTTAATTCTCTAGCAATCATCATCAATCCAAAGGTAAAGATGACCATGAGACGACATCAATACATTGAGGGGTATTTTAGTAGAGGCTACCTATTGAGTTCACTGTCTTGCTAAACTGAAAGTGATCTACATATCCAGTTTTGATGGGAATTTGGGAACGAATGCAAATATTTTCTAACAACATAAAAAATGTCATAGTTTTGATATTGCCATCTATTAGCTGGGCGTAGGATGTTCAAACATGTGGGGTCATCCTCTAGCCAGTACGGTTACATAGTTTTGTAATATATTAACTGATTACAAATTTACAATGTGGCTAAGAAAGAGGAACTGGAATGGTAAAGATATACGACGTATGTGTTTTACTACGTATAATAAGTGTATTATGCGTCAAATGTGATCTTCATTTGGATTCTTTTGCTTATTCTCTTGCTGCCGTGCACTTCTTATTGTGTGGTTTGTGTCTGAGTGACCGAGTTCCTTAGTTTTTGTGAACTATATGTTACCGGAATTGGAATGTCTAGCGATTGATTATGGAATTATGATATGGAGTGTTTACATAACCCTTTTTGTGCCTGAGAAATCTCCTTTTGCTTGCATTCCTAATCTATCCAATTTTGGGGCATCTCTAAGCTAAACTGGTTTCCTGATTGAACTCATTGAAGGAATATCGCTCATGCTATTGTTTTGGTAACTTCTCCAAGAACATCCTTTTGCTTCTTTTAAAAAAAAAAAAATATTTTAAAAAAGTTCGCTTGGATATTGTCTTGGGGATGAAGTGAGTATTCTAAAGTTGAATAGAATGAATGCCTTTATTTTGGACATATGACTAAACAATTTGGAGTTTTAAAAGATTCTACGCTACTTGATTGTAAAGATTTGGTCACAAATGAAGAGCCATGTGATTTTTGACTTTGTAGCTGAAGATGTATACATAAGTACATAACAGCCCCCGGTAATCACCAGCTTACTTAAACACGCGGAGTTCATTAATAGCATTCAAGAACTTTCAGCTGTTGTGAAATTTTGTTGATACGTGGTTTTAGAATGTCTAACTCTTGTCTGTTTTGGCTACTTCTTTGCATAGCTGGTGCTTACCCTGTTCTATTTTTCTCTCTGCAGAGTCAAGGAGATTTTCTTCACTTCAGGTCAAAGCTTCCTCAACAGACGAAACCTCTGTTGATAGCAGTGAATTACTTAGTGACCTGAAAGAGAAGGTAGGTGTGAATTATGACCTTAAATGAACCCCTACTGCATTTGTTTCGTCATGGCTTAATTGTTGAAAACAATAATCTTTTCTTTTTGTTTAAACTTTTGCAGTGGGATAATGTTGAGAATAAGTCCACTGTACTTATATACGGTGGTGGTGCAGTAGTTGCAGTTTGGCTATCTTCCATTCTTGTTGGTGCTATCAACTCTGTTCCTCTGGTATGTGATTTTTCTTTTCCACTATACCCCTTCTTGGATCTGTTTTCTTGATAACTGGACAACTGGTTGTGTTTTAGAGTCCTTGGACTGTCACACATCAAAGTATATCTCCTTTCTGAATGCCTAGCTTGAACAGTATTTTACCCTCCCTAGTATTTGAAATTTGAATTACATCATTTTACTTCCCTTCGAACACCCCTTCCTAGCCGACAAACTAAAAAGAAAATTATTGTAGATAACTTGAAGGGTGATCAATTTAAGGAATATTGGGCCTCAGATTCCTTCATGTTTCCTTATTGTTGCTTTCTCTTGAGCTGGCTGAACCTAGTTAGTGAATCAGCTGAACTTACTTACCGTGAAGGAATCCGGACTTGTTATTTTGCCACAATTGAAGTCTCCGTGAAATTGTGAATACACTGTTGTTAAGTTTGTTATTGGGGTTTTAAAGATGAATTGAACCACAAGGTTGAATTACAGAACAAATTTGGAACATTTCCCCTGATAATTAGCATTTTTTGAAATTATGTTTGAGCCATAATTTACGTTGTTGTTATTATCAGCTTCCAAAGCTCATGGAATTGGTTGGGCTCGGATACACGGGATGGTTTGTTTACCGATACCTTCTTTTCAAGGTAAAGTTCCTGTTTGTTCTTTTCCGTGCACTGAATTTAAGCTGCTTACTTTTGTAATCTTTCTGAACCAATTAAAACAATTATCCTTTACTTGTAAGTCCAATTTCAGCTTCAACCCCAGTACCCTTCCTGCCCTGTTCAGCTAAGAAGAATTAAAGAAAGCCTTTTTGTTTTAAGTTAACATTGTCTTGTTTTTCCATCCTTATTACTTGCTTTTGCCTTTCTCACTTTACTAGTTAGTGCACGGAGGCCCTACTGATATTTGAGTCAATTTGACTCCTCATGCTGCTAAAATACGTTGTTTGTATATTCAATTACCTGTGTCACAATTTGGTGCGTCTCTTGCAATTAGTAACTTGTTTTTAAAATAAATTTCTCTTCGATTTAGCACTGAAACATTGCAAAGCTTAAAAGTAAGTATCATGATTATTGTCTTGCTTAATACTTTGTATAAAGCTCTTATCTTTGTATATTTTGAAATTCATGGGAATTAGATTTGCCGGTGGACAGTGGACAATCTTGATTAATCAAAAAAATTCATGAGCCAAAGAAAAAAGTGATTTCTTATTTAGCACCCAAATAATGCAAGTATCTTTTACTAGATGATCATTATAAGGCATTGCTTTCAACTGCTTTTTAAGAAGAAAAGCTCTACACTGTGATCAAAATTTTGCTCATCAAAACTGAATTTTTAATGTTAAACTACTGATGAAAGTGGGTTTTAGTGGAAGAAAATAGAAAGCAAAAGAAGGGGAAACAAGTGCCATGCTACTTTCACCATGAGTCCTTTTTTCTGTGATCATTATTTACGCATTGCTTAATTTTAGTTCCAAAAGGTAAAGGACGCTGACCTCCCTTTTCTTTCTTGTTTATGTGTCTTGTTCAGACTAGTAGAAAGGAACTCGCAGAAGACATTGAATCATTGAAGAAGAAAATTGCTGGAACTGAGTAAAATATCACCTAGACTAGCAATACTCAAAGTGAAGAGGAACTCGGTTCCCAATCATGTTGTATAATAGGCCATAGAGCTACTCCTATTATGTATCGCAATTGATTCTGTCTCCAGTTTTAGAATTGGAATGTTGATATGGATTGGATAAATGTACAAGTTTTTATGTAATTCAAGTGGCTTTTTGTTGCTCTGTTTTTCCTGCTGTAATTTACAGCAACGTTAGGCCGAATTGCATTTCATCATTTTTATGGTTATACACTGCAAATCTCTGATGTTATTATTCGAACATTTAGCAGTTGGATTTGTCAGGTACAATTGATCTTGGTATAATAGGTTGACACCTTGTTAACTGAAAG

mRNA sequence

ATGGCAGCAACTTATGCAGGAACATCGTCTTCAATGGCGGCTGCAACAAGTGGGTTGCTTCCACGTGTCCACGCCAACCACTCCTCCCGCTTTATAGCGTTGCCTTATCTCCCTCCTCGTACCTCTACTTCTTCTTTGAAGATCTTCTCCAACAATTTGTCTGAGTCAAGGAGATTTTCTTCACTTCAGGTCAAAGCTTCCTCAACAGACGAAACCTCTGTTGATAGCAGTGAATTACTTAGTGACCTGAAAGAGAAGTGGGATAATGTTGAGAATAAGTCCACTGTACTTATATACGGTGGTGGTGCAGTAGTTGCAGTTTGGCTATCTTCCATTCTTGTTGGTGCTATCAACTCTGTTCCTCTGCTTCCAAAGCTCATGGAATTGGTTGGGCTCGGATACACGGGATGGTTTGTTTACCGATACCTTCTTTTCAAGACTAGTAGAAAGGAACTCGCAGAAGACATTGAATCATTGAAGAAGAAAATTGCTGGAACTGAGTAAAATATCACCTAGACTAGCAATACTCAAAGTGAAGAGGAACTCGGTTCCCAATCATGTTGTATAATAGGCCATAGAGCTACTCCTATTATGTATCGCAATTGATTCTGTCTCCAGTTTTAGAATTGGAATGTTGATATGGATTGGATAAATGTACAAGTTTTTATGTAATTCAAGTGGCTTTTTGTTGCTCTGTTTTTCCTGCTGTAATTTACAGCAACGTTAGGCCGAATTGCATTTCATCATTTTTATGGTTATACACTGCAAATCTCTGATGTTATTATTCGAACATTTAGCAGTTGGATTTGTCAGGTACAATTGATCTTGGTATAATAGGTTGACACCTTGTTAACTGAAAG

Coding sequence (CDS)

ATGGCAGCAACTTATGCAGGAACATCGTCTTCAATGGCGGCTGCAACAAGTGGGTTGCTTCCACGTGTCCACGCCAACCACTCCTCCCGCTTTATAGCGTTGCCTTATCTCCCTCCTCGTACCTCTACTTCTTCTTTGAAGATCTTCTCCAACAATTTGTCTGAGTCAAGGAGATTTTCTTCACTTCAGGTCAAAGCTTCCTCAACAGACGAAACCTCTGTTGATAGCAGTGAATTACTTAGTGACCTGAAAGAGAAGTGGGATAATGTTGAGAATAAGTCCACTGTACTTATATACGGTGGTGGTGCAGTAGTTGCAGTTTGGCTATCTTCCATTCTTGTTGGTGCTATCAACTCTGTTCCTCTGCTTCCAAAGCTCATGGAATTGGTTGGGCTCGGATACACGGGATGGTTTGTTTACCGATACCTTCTTTTCAAGACTAGTAGAAAGGAACTCGCAGAAGACATTGAATCATTGAAGAAGAAAATTGCTGGAACTGAGTAA

Protein sequence

MAATYAGTSSSMAAATSGLLPRVHANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRRFSSLQVKASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSVPLLPKLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo01714	Spo01714	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo01714.1	Spo01714.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01714.1.CDS.5	Spo01714.1.CDS.5	CDS
Spo01714.1.CDS.4	Spo01714.1.CDS.4	CDS
Spo01714.1.CDS.3	Spo01714.1.CDS.3	CDS
Spo01714.1.CDS.2	Spo01714.1.CDS.2	CDS
Spo01714.1.CDS.1	Spo01714.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01714.1.utr3p.1	Spo01714.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01714.1.exon.5	Spo01714.1.exon.5	exon
Spo01714.1.exon.4	Spo01714.1.exon.4	exon
Spo01714.1.exon.3	Spo01714.1.exon.3	exon
Spo01714.1.exon.2	Spo01714.1.exon.2	exon
Spo01714.1.exon.1	Spo01714.1.exon.1	exon

Homology

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BLAST of Spo01714.1 vs. NCBI nr
Match: gi|902173027|gb|KNA08205.1| (hypothetical protein SOVF_164650 [Spinacia oleracea])

HSP 1 Score: 309.7 bits (792), Expect = 3.100e-81
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 1


		  
Query: 1   MAATYAGTSSSMAAATSGLLPRVHANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRRFS 60
           M+ATYAGTSSSMAAATSGLLPRVHANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRRFS
Sbjct: 1   MSATYAGTSSSMAAATSGLLPRVHANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRRFS 60

Query: 61  SLQVKASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSV 120
           SLQVKASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSV
Sbjct: 61  SLQVKASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSV 120

Query: 121 PLLPKLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168
           PLLPKLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE
Sbjct: 121 PLLPKLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 167

[Close]

BLAST of Spo01714.1 vs. NCBI nr
Match: gi|731311434|ref|XP_010669522.1| (PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 280.0 bits (715), Expect = 2.700e-72
Identity = 149/168 (88.69%), Postives = 160/168 (95.24%), Query Frame = 1


		  
Query: 1   MAATYAGTSSSMAAATSGLLPRVHANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRRFS 60
           MAA YAGTSSSMA AT+GLLPRV AN SSRF+ALPYLPPRTSTSSL+I SNNLSESRRFS
Sbjct: 1   MAAAYAGTSSSMATATTGLLPRVQANQSSRFLALPYLPPRTSTSSLRILSNNLSESRRFS 60

Query: 61  SLQVKASSTDE-TSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINS 120
           SLQVKA+STDE +SVD+ EL+SDLKEKWD VENKSTVL+YGGGAVVA+WLSSI+VGAINS
Sbjct: 61  SLQVKATSTDEASSVDTGELISDLKEKWDKVENKSTVLLYGGGAVVAIWLSSIIVGAINS 120

Query: 121 VPLLPKLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168
           VPLLPK+MELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE
Sbjct: 121 VPLLPKIMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168

[Close]

BLAST of Spo01714.1 vs. NCBI nr
Match: gi|802694814|ref|XP_012083273.1| (PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Jatropha curcas])

HSP 1 Score: 213.0 bits (541), Expect = 4.000e-52
Identity = 119/169 (70.41%), Postives = 137/169 (81.07%), Query Frame = 1


		  
Query: 1   MAATY--AGTSSSMAAATSGLLPRVHANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRR 60
           MAAT   A  SSSMA  T+ L+P   AN ++R  ALPYLPPR  + S +     +SE RR
Sbjct: 1   MAATVYAAAASSSMAGTTAALIPS--ANRTTRCSALPYLPPRLPSHSFRSSIKQVSEPRR 60

Query: 61  FSSLQVKASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAIN 120
           FS  Q++ASS D +SVD SEL +DLKEKWD VENKSTVL+YGGGA+VAVWLSSI+VGAIN
Sbjct: 61  FSLHQIRASSEDTSSVDPSELFTDLKEKWDAVENKSTVLLYGGGAIVAVWLSSIVVGAIN 120

Query: 121 SVPLLPKLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168
           SVPLLPK+MELVGLGYTGWFVYRYLLFK+SRKELA DI++LKKKIAGTE
Sbjct: 121 SVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIDALKKKIAGTE 167

[Close]

BLAST of Spo01714.1 vs. NCBI nr
Match: gi|388500696|gb|AFK38414.1| (unknown [Lotus japonicus])

HSP 1 Score: 206.1 bits (523), Expect = 4.900e-50
Identity = 115/160 (71.88%), Postives = 135/160 (84.38%), Query Frame = 1


		  
Query: 13  AAATSGLLPRVH--ANHSSRFIALPYLPPRTSTSSLKIFSNNL---SESRRFSSLQVKAS 72
           AAA++ LLP       + +R  ALPYLPPR ST++  +FS +L   SESR+ S LQ +AS
Sbjct: 4   AAASTVLLPHRFPTTTNITRCSALPYLPPRVSTTTTTLFSPSLKHFSESRKPSLLQTRAS 63

Query: 73  STDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSVPLLPKLM 132
           S + +SVD++EL+SDLKEKWD VENKSTV+IYGGGA+VAVWLSSILVGAINSVPLLPK+M
Sbjct: 64  SDETSSVDTNELISDLKEKWDAVENKSTVIIYGGGALVAVWLSSILVGAINSVPLLPKIM 123

Query: 133 ELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168
           ELVGLGYTGWFVYRYLLFK+SRKELA DIES+KKKIAGTE
Sbjct: 124 ELVGLGYTGWFVYRYLLFKSSRKELATDIESIKKKIAGTE 163

[Close]

BLAST of Spo01714.1 vs. NCBI nr
Match: gi|590721553|ref|XP_007051646.1| (Uncharacterized protein TCM_005215 [Theobroma cacao])

HSP 1 Score: 204.9 bits (520), Expect = 1.100e-49
Identity = 115/163 (70.55%), Postives = 133/163 (81.60%), Query Frame = 1


		  
Query: 6   AGTSSSMAAATSGLLPRVH-ANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRRFSSLQV 65
           A  +SS  AAT+ L+PRV  A  ++R  ALP LPPR ST+S       + ESRRFS LQ 
Sbjct: 2   AAAASSSMAATAVLIPRVPTALRTTRCSALPLLPPRVSTASFSSSVKLIPESRRFSLLQT 61

Query: 66  KASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSVPLLP 125
           KAS  + TSVD+ EL +DLKEKW+ +ENKSTVLIYGGGA+VAVWLS+ILVGAINSVPLLP
Sbjct: 62  KASE-ETTSVDAGELFTDLKEKWEKIENKSTVLIYGGGAIVAVWLSAILVGAINSVPLLP 121

Query: 126 KLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168
           K+MELVGLGYTGWFVYRYLLFK+SRKELA DIE+LKKKI+GTE
Sbjct: 122 KIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKISGTE 163

[Close]

BLAST of Spo01714.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLR5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_164650 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.200e-81
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 1


		  
Query: 1   MAATYAGTSSSMAAATSGLLPRVHANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRRFS 60
           M+ATYAGTSSSMAAATSGLLPRVHANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRRFS
Sbjct: 1   MSATYAGTSSSMAAATSGLLPRVHANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRRFS 60

Query: 61  SLQVKASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSV 120
           SLQVKASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSV
Sbjct: 61  SLQVKASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSV 120

Query: 121 PLLPKLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168
           PLLPKLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE
Sbjct: 121 PLLPKLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 167

[Close]

BLAST of Spo01714.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D7L8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g003680 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 1.900e-72
Identity = 149/168 (88.69%), Postives = 160/168 (95.24%), Query Frame = 1


		  
Query: 1   MAATYAGTSSSMAAATSGLLPRVHANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRRFS 60
           MAA YAGTSSSMA AT+GLLPRV AN SSRF+ALPYLPPRTSTSSL+I SNNLSESRRFS
Sbjct: 1   MAAAYAGTSSSMATATTGLLPRVQANQSSRFLALPYLPPRTSTSSLRILSNNLSESRRFS 60

Query: 61  SLQVKASSTDE-TSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINS 120
           SLQVKA+STDE +SVD+ EL+SDLKEKWD VENKSTVL+YGGGAVVA+WLSSI+VGAINS
Sbjct: 61  SLQVKATSTDEASSVDTGELISDLKEKWDKVENKSTVLLYGGGAVVAIWLSSIIVGAINS 120

Query: 121 VPLLPKLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168
           VPLLPK+MELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE
Sbjct: 121 VPLLPKIMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168

[Close]

BLAST of Spo01714.1 vs. UniProtKB/TrEMBL
Match: A0A067K0D7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14304 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.800e-52
Identity = 119/169 (70.41%), Postives = 137/169 (81.07%), Query Frame = 1


		  
Query: 1   MAATY--AGTSSSMAAATSGLLPRVHANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRR 60
           MAAT   A  SSSMA  T+ L+P   AN ++R  ALPYLPPR  + S +     +SE RR
Sbjct: 1   MAATVYAAAASSSMAGTTAALIPS--ANRTTRCSALPYLPPRLPSHSFRSSIKQVSEPRR 60

Query: 61  FSSLQVKASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAIN 120
           FS  Q++ASS D +SVD SEL +DLKEKWD VENKSTVL+YGGGA+VAVWLSSI+VGAIN
Sbjct: 61  FSLHQIRASSEDTSSVDPSELFTDLKEKWDAVENKSTVLLYGGGAIVAVWLSSIVVGAIN 120

Query: 121 SVPLLPKLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168
           SVPLLPK+MELVGLGYTGWFVYRYLLFK+SRKELA DI++LKKKIAGTE
Sbjct: 121 SVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIDALKKKIAGTE 167

[Close]

BLAST of Spo01714.1 vs. UniProtKB/TrEMBL
Match: I3SDS2_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.400e-50
Identity = 115/160 (71.88%), Postives = 135/160 (84.38%), Query Frame = 1


		  
Query: 13  AAATSGLLPRVH--ANHSSRFIALPYLPPRTSTSSLKIFSNNL---SESRRFSSLQVKAS 72
           AAA++ LLP       + +R  ALPYLPPR ST++  +FS +L   SESR+ S LQ +AS
Sbjct: 4   AAASTVLLPHRFPTTTNITRCSALPYLPPRVSTTTTTLFSPSLKHFSESRKPSLLQTRAS 63

Query: 73  STDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSVPLLPKLM 132
           S + +SVD++EL+SDLKEKWD VENKSTV+IYGGGA+VAVWLSSILVGAINSVPLLPK+M
Sbjct: 64  SDETSSVDTNELISDLKEKWDAVENKSTVIIYGGGALVAVWLSSILVGAINSVPLLPKIM 123

Query: 133 ELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168
           ELVGLGYTGWFVYRYLLFK+SRKELA DIES+KKKIAGTE
Sbjct: 124 ELVGLGYTGWFVYRYLLFKSSRKELATDIESIKKKIAGTE 163

[Close]

BLAST of Spo01714.1 vs. UniProtKB/TrEMBL
Match: A0A061E0L7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_005215 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.600e-50
Identity = 115/163 (70.55%), Postives = 133/163 (81.60%), Query Frame = 1


		  
Query: 6   AGTSSSMAAATSGLLPRVH-ANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRRFSSLQV 65
           A  +SS  AAT+ L+PRV  A  ++R  ALP LPPR ST+S       + ESRRFS LQ 
Sbjct: 2   AAAASSSMAATAVLIPRVPTALRTTRCSALPLLPPRVSTASFSSSVKLIPESRRFSLLQT 61

Query: 66  KASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSVPLLP 125
           KAS  + TSVD+ EL +DLKEKW+ +ENKSTVLIYGGGA+VAVWLS+ILVGAINSVPLLP
Sbjct: 62  KASE-ETTSVDAGELFTDLKEKWEKIENKSTVLIYGGGAIVAVWLSAILVGAINSVPLLP 121

Query: 126 KLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168
           K+MELVGLGYTGWFVYRYLLFK+SRKELA DIE+LKKKI+GTE
Sbjct: 122 KIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKISGTE 163

[Close]

BLAST of Spo01714.1 vs. ExPASy Swiss-Prot
Match: CUT1A_ARATH (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.300e-47
Identity = 111/170 (65.29%), Postives = 134/170 (78.82%), Query Frame = 1


		  
Query: 3   ATYAGTSSSMAAATSGLLPRVHANHSSRFIALPYLPPRTS-----TSSLKIFSNNLSESR 62
           A     SSSMA     ++PRV A  S+R  A+PYLPPR+      T  LK+ S N    +
Sbjct: 2   AISVAASSSMAV----MVPRVPAV-STRCSAVPYLPPRSFGRSSFTVPLKLVSGN--GLQ 61

Query: 63  RFSSLQVKASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAI 122
           +   L+ +ASS + +S+D++EL++DLKEKWD +ENKSTVLIYGGGA+VAVWLSSI+VGAI
Sbjct: 62  KVELLKTRASSEETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAI 121

Query: 123 NSVPLLPKLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168
           NSVPLLPK+MELVGLGYTGWFVYRYLLFK+SRKELAEDIESLKKKIAG+E
Sbjct: 122 NSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]

BLAST of Spo01714.1 vs. ExPASy Swiss-Prot
Match: CUT1D_ARATH (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana GN=CURT1D PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 9.300e-17
Identity = 43/103 (41.75%), Postives = 70/103 (67.96%), Query Frame = 1


		  
Query: 65  KASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSVPLLP 124
           +A   ++    + E L+D+K   D   +   +L+YG GA+VA++L+S +V ++ ++PL P
Sbjct: 92  EAPQAEDEETQALEFLNDIKLDSDKTYS---ILLYGSGAIVALYLTSAIVSSLEAIPLFP 151

Query: 125 KLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168
           KLME+VGLGYT WF  RYLLFK +R+EL   +  +KK++ G++
Sbjct: 152 KLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSD 191

[Close]

BLAST of Spo01714.1 vs. ExPASy Swiss-Prot
Match: CUT1B_ARATH (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana GN=CURT1B PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 4.300e-14
Identity = 46/141 (32.62%), Postives = 81/141 (57.45%), Query Frame = 1


		  
Query: 32  IALPYLPPRTSTSSLKIFS------NNLSESRRFSSLQVKASSTDETSVDSSELLSDLKE 91
           I+LP LP ++ T + K  +       N+         +  A++T+  + +  E++   +E
Sbjct: 33  ISLPTLPIQSHTRAAKATAYCRKIVRNVVTRATTEVGEAPATTTEAETTELPEIVKTAQE 92

Query: 92  KWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSVPLLPKLMELVGLGYTGWFVYRYLLF 151
            W+ V++K  +       VVA+W S+ ++ AI+ +PL+P ++ELVG+GYTGWF Y+ L+F
Sbjct: 93  AWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVF 152

Query: 152 KTSRKELAEDIESLKKKIAGT 167
           K  R+ L E ++S  K I G+
Sbjct: 153 KPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of Spo01714.1 vs. ExPASy Swiss-Prot
Match: CUT1C_ARATH (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana GN=CURT1C PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.500e-11
Identity = 43/145 (29.66%), Postives = 76/145 (52.41%), Query Frame = 1


		  
Query: 21  PRVHANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRRFSSLQVKASSTDETSVDSSELL 80
           P +     S   ++  LP   +  +  +   +L+ +    SL VKAS     S    +++
Sbjct: 11  PLLLTQRKSNLTSIQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGESSDSSTDLDVV 70

Query: 81  SDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSVPLLPKLMELVGLGYTGWFVY 140
           S ++  WD  E++  ++  G   +VA+W S  L+ AI+ +P++    ELVG+ ++ WF Y
Sbjct: 71  STIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTY 130

Query: 141 RYLLFKTSRKELAEDIESLKKKIAG 166
           RYLLFK  R+EL++ ++     I G
Sbjct: 131 RYLLFKPDRQELSKIVKKSVADILG 155

[Close]

BLAST of Spo01714.1 vs. ExPASy Swiss-Prot
Match: SYE_TRIEI (Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) GN=gltX PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.100e-7
Identity = 23/55 (41.82%), Postives = 43/55 (78.18%), Query Frame = 1


		  
Query: 111 SILVGAINSVPLLPKLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAG 166
           ++++ A++ +P+L  + EL+G+ Y  WFVYRYLL +++R+EL + IE++K++I G
Sbjct: 824 AVVIEALDGIPILSIIFELIGVIYLVWFVYRYLLKRSNRQELLDKIENIKREIFG 878

[Close]

BLAST of Spo01714.1 vs. TAIR (Arabidopsis)
Match: AT4G01150.1 (unknown protein)

HSP 1 Score: 189.9 bits (481), Expect = 1.300e-48
Identity = 111/170 (65.29%), Postives = 134/170 (78.82%), Query Frame = 1


		  
Query: 3   ATYAGTSSSMAAATSGLLPRVHANHSSRFIALPYLPPRTS-----TSSLKIFSNNLSESR 62
           A     SSSMA     ++PRV A  S+R  A+PYLPPR+      T  LK+ S N    +
Sbjct: 2   AISVAASSSMAV----MVPRVPAV-STRCSAVPYLPPRSFGRSSFTVPLKLVSGN--GLQ 61

Query: 63  RFSSLQVKASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAI 122
           +   L+ +ASS + +S+D++EL++DLKEKWD +ENKSTVLIYGGGA+VAVWLSSI+VGAI
Sbjct: 62  KVELLKTRASSEETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAI 121

Query: 123 NSVPLLPKLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168
           NSVPLLPK+MELVGLGYTGWFVYRYLLFK+SRKELAEDIESLKKKIAG+E
Sbjct: 122 NSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]

BLAST of Spo01714.1 vs. TAIR (Arabidopsis)
Match: AT4G38100.1 (unknown protein)

HSP 1 Score: 88.2 bits (217), Expect = 5.200e-18
Identity = 43/103 (41.75%), Postives = 70/103 (67.96%), Query Frame = 1


		  
Query: 65  KASSTDETSVDSSELLSDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSVPLLP 124
           +A   ++    + E L+D+K   D   +   +L+YG GA+VA++L+S +V ++ ++PL P
Sbjct: 92  EAPQAEDEETQALEFLNDIKLDSDKTYS---ILLYGSGAIVALYLTSAIVSSLEAIPLFP 151

Query: 125 KLMELVGLGYTGWFVYRYLLFKTSRKELAEDIESLKKKIAGTE 168
           KLME+VGLGYT WF  RYLLFK +R+EL   +  +KK++ G++
Sbjct: 152 KLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSD 191

[Close]

BLAST of Spo01714.1 vs. TAIR (Arabidopsis)
Match: AT2G46820.1 (photosystem I P subunit)

HSP 1 Score: 79.3 bits (194), Expect = 2.400e-15
Identity = 46/141 (32.62%), Postives = 81/141 (57.45%), Query Frame = 1


		  
Query: 32  IALPYLPPRTSTSSLKIFS------NNLSESRRFSSLQVKASSTDETSVDSSELLSDLKE 91
           I+LP LP ++ T + K  +       N+         +  A++T+  + +  E++   +E
Sbjct: 33  ISLPTLPIQSHTRAAKATAYCRKIVRNVVTRATTEVGEAPATTTEAETTELPEIVKTAQE 92

Query: 92  KWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSVPLLPKLMELVGLGYTGWFVYRYLLF 151
            W+ V++K  +       VVA+W S+ ++ AI+ +PL+P ++ELVG+GYTGWF Y+ L+F
Sbjct: 93  AWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVF 152

Query: 152 KTSRKELAEDIESLKKKIAGT 167
           K  R+ L E ++S  K I G+
Sbjct: 153 KPDREALFEKVKSTYKDILGS 173

[Close]

BLAST of Spo01714.1 vs. TAIR (Arabidopsis)
Match: AT1G52220.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 69.3 bits (168), Expect = 2.500e-12
Identity = 43/145 (29.66%), Postives = 76/145 (52.41%), Query Frame = 1


		  
Query: 21  PRVHANHSSRFIALPYLPPRTSTSSLKIFSNNLSESRRFSSLQVKASSTDETSVDSSELL 80
           P +     S   ++  LP   +  +  +   +L+ +    SL VKAS     S    +++
Sbjct: 11  PLLLTQRKSNLTSIQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGESSDSSTDLDVV 70

Query: 81  SDLKEKWDNVENKSTVLIYGGGAVVAVWLSSILVGAINSVPLLPKLMELVGLGYTGWFVY 140
           S ++  WD  E++  ++  G   +VA+W S  L+ AI+ +P++    ELVG+ ++ WF Y
Sbjct: 71  STIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTY 130

Query: 141 RYLLFKTSRKELAEDIESLKKKIAG 166
           RYLLFK  R+EL++ ++     I G
Sbjct: 131 RYLLFKPDRQELSKIVKKSVADILG 155

The following BLAST results are available for this feature:

BLAST of Spo01714.1 vs. NCBI nr
BLAST of Spo01714.1 vs. UniProtKB/TrEMBL
BLAST of Spo01714.1 vs. ExPASy Swiss-Prot
BLAST of Spo01714.1 vs. TAIR (Arabidopsis)

BLAST of Spo01714.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902173027\|gb\|KNA08205.1\|	3.1e-81	99.4	hypothetical protein SOVF_1646...	[more]
gi\|731311434\|ref\|XP_010669522.1\|	2.7e-72	88.6	PREDICTED: protein CURVATURE T...	[more]
gi\|802694814\|ref\|XP_012083273.1\|	4.0e-52	70.4	PREDICTED: protein CURVATURE T...	[more]
gi\|388500696\|gb\|AFK38414.1\|	4.9e-50	71.8	unknown [Lotus japonicus]	[more]
gi\|590721553\|ref\|XP_007051646.1\|	1.1e-49	70.5	Uncharacterized protein TCM_00...	[more]

BLAST of Spo01714.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QLR5_SPIOL	2.2e-81	99.4	Uncharacterized protein OS=Spi...	[more]
A0A0J8D7L8_BETVU	1.9e-72	88.6	Uncharacterized protein OS=Bet...	[more]
A0A067K0D7_JATCU	2.8e-52	70.4	Uncharacterized protein OS=Jat...	[more]
I3SDS2_LOTJA	3.4e-50	71.8	Uncharacterized protein OS=Lot...	[more]
A0A061E0L7_THECC	7.6e-50	70.5	Uncharacterized protein OS=The...	[more]

BLAST of Spo01714.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CUT1A_ARATH	2.3e-47	65.2	Protein CURVATURE THYLAKOID 1A...	[more]
CUT1D_ARATH	9.3e-17	41.7	Protein CURVATURE THYLAKOID 1D...	[more]
CUT1B_ARATH	4.3e-14	32.6	Protein CURVATURE THYLAKOID 1B...	[more]
CUT1C_ARATH	4.5e-11	29.6	Protein CURVATURE THYLAKOID 1C...	[more]
SYE_TRIEI	5.1e-7	41.8	Glutamate--tRNA ligase OS=Tric...	[more]

BLAST of Spo01714.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT4G01150.1	1.3e-48	65.2	unknown protein	[more]
AT4G38100.1	5.2e-18	41.7	unknown protein	[more]
AT2G46820.1	2.4e-15	32.6	photosystem I P subunit	[more]
AT1G52220.1	2.5e-12	29.6	FUNCTIONS IN: molecular_functi...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025564	Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain	PFAM	PF14159	CAAD	coord: 82..165 score: 4.7
None	No IPR available	PANTHER	PTHR33222:SF4	PROTEIN CURVATURE THYLAKOID 1A, CHLOROPLASTIC	coord: 1..167 score: 5.0

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0010287	plastoglobule