Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTCTCTCTCTACTCTATCTCATCTCCCCACCCTTCCAAAAGTCAGCGCCTTCTCTTGTCTCCATTCTTTCATTCCTTCTTCCTTCTTTATTCTCTCTCTCCTCATTTCATCCATGGAAAACCCTCCAGATTGGGATCTACTCGCCGTAGTCAGAAGCTGTTGCACCACTACAACAACCACATCAGCCACCACATCAACGCCGGATCTACAACCTTCTCCACCACCACTACCACCAACACCACCACCATCTACGTCTTCCCAGTTCACCCCTCTTCCTCAACAACAGCAATTAAAACAGGAGTCATACTTTTCATCTTCATCTCCTTGTTCATCAACTGGGGGTGGTGTTCTTTTCCAGTTTTCAAACCCCTTTGAGTGTTCTTCTTCCTCAACGACGTCGTTTGAGTTGCAGGATATTTGCAAACCTTTGATTTGCTCCACCATTCACAATAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAATAACAGTAGTTGTTTCCAGTCTCTATCCTCTGTTTCCTTAGCATCCCCTGTTTCTTCGCCGTCGTCGGTTATCACCGGAAGATCTTTTGGAGTTGGGGAACAACAACAAACGCAGCAAATTCGAGGATTAATTAAACCTTCTCATGTCATTTTTGGAACTTCTCCTTCTATTACTACTTCTAATGCTCAGAGAACAAAGAAAAGGTTGGTAATGTTTTTTAATTTGATTAATGAGAAAAAGTTGAAACTGAGGAGTACCCATTTTCTGTATTAGTTTTAATTTTAATGGGTTTTGTTTTGATTTTTATAATTTTTGTTGTACAGGAAGAATTTGATGAAGAAAGTGTGCCATGTTCCAGCAGAAGGTCTTTCCTCTGATATGTGGGCTTGGAGAAAATATGGCCAGAAACCCATCAAAGGCTCCCCATATCCAAGGTGGGTTTGATTTCATTTTTGTTTCTTACAACACAAATTACTACTTACTCGATTTGCCCAAGTTGTACCCACTTTCTGTTTTCATCGGTTTTTCATATTATTTTACGAAACGTTCGGTTAAGCATATGCTAAAGCACCTATAATAACATGGTGTGATAAGCTAAAGAATTTGTGTTCAAACTCTTTATTTGCTTTAAAAAGCAAAGCAAATTCCTCAACACACAACACTGAGAATCTCATCCAATTTCAACTCATTTCCAAAAATACTTTCTTTTAAAGGTGAAACCAGAAAAGCAGTACTTGTTCAATGAAGCTAACCATTAAAAGAAATTCACCAACCAAAATACAGTTTTTGATTTTCAGATTCTGCTAGAAATTTGGATTATCTGTACTGATTGATTTTCCAAAATGAACAGGGGATATTACAGATGTAGCAGTTCGAAGGGGTGTTTAGCCAGAAAACAAGTAGAGCGCAACAGATCAGACCCTAAAATGTTCATAGTCACCTACACATCAGAACACAACCACCCTATGCCGACTCACAGGAACTCCCTCGCCGGAAGCACACGCCAAAAGCCTCTCTCCTCCGCCGGAACACCGCCAGAGCAGCCCTCCTGCTCGTCTCCCTCCGCCGCGAGTCGTTCTCCTTTGACCGAGAAGTCAGAGTCCAAGACAGAAGGGGATGATATGATCAAAGAGGAGGATGATACTAGTGAGATGGCTCTATCCGATTTGATGCTAAATGATGATTTCTACGTGGGGTTTGAGCAAATCGACGGCTCAGATGGTAGTGATTGCTTTTCAGATCATTTTTCGCCGTCGTCGGATTTTCCTTGGTTAAGCAGCAGTAGTAGTACGGCAGCCGCCGCTGGAGGGAGTTGACTTATTCCGGTATAGGTTGACTTTTAATTTTCCGGCGGGGAGGAGTTTCTAGTGGTTGTTTGTTGATGATGGTGGGATTGACTTTTTGTTCATTGACATGATGCCTTCCCACTTTAATATGGTCAACTTTTATTTTAATTAATTAAAATTTACCTTTTTGTGCTTTTTTGGAGGGGGAGGTGGGAAAAATGCTCTCACTATTTGTCAGAATCTCTGTAAGGTCACAATGGCATTGTGGATTTGGAAGGTAGTGGAGATTAACAGTAAAAAAAAGTTAGAGAGAGAAAAGAAGAGAGAGAGAAGGGATTTTTAGTTGGTAGAATCTCAATTCTCAACTAAAGTAACTTTTTTTTTTTGATATTTTTTTTATGGTGATTTGTAAGTGAATGTAATGGGAATGGTCCATTGATTGATAGGACGAGGAAGGAGAACCTTGTAGAGGGGAAAACAAAAGGGGGATAGGGTTGAGGTGCATATGCTTATAGTTATTCTTTTGTTTTTGTGAAGGAAGGGAAAAGAAAAGAAAGGAAGAGGAATAGATCATAGTAGCATAGTGGTACTCGTAGTACTTAGCAATAAAACTCATAAAGTTATTTATTTGGTATATATACTTTTTTTATTTTACAATGATTGTGCTATTTCTATTTCTGGTGTCAATTTAAATTTTAGATATACTTTTTAAATTATTCTTTTTTATTCGTTATTCTCTTTACATAACGCTACTCTCATA GTTTCTCTCTCTACTCTATCTCATCTCCCCACCCTTCCAAAAGTCAGCGCCTTCTCTTGTCTCCATTCTTTCATTCCTTCTTCCTTCTTTATTCTCTCTCTCCTCATTTCATCCATGGAAAACCCTCCAGATTGGGATCTACTCGCCGTAGTCAGAAGCTGTTGCACCACTACAACAACCACATCAGCCACCACATCAACGCCGGATCTACAACCTTCTCCACCACCACTACCACCAACACCACCACCATCTACGTCTTCCCAGTTCACCCCTCTTCCTCAACAACAGCAATTAAAACAGGAGTCATACTTTTCATCTTCATCTCCTTGTTCATCAACTGGGGGTGGTGTTCTTTTCCAGTTTTCAAACCCCTTTGAGTGTTCTTCTTCCTCAACGACGTCGTTTGAGTTGCAGGATATTTGCAAACCTTTGATTTGCTCCACCATTCACAATAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAATAACAGTAGTTGTTTCCAGTCTCTATCCTCTGTTTCCTTAGCATCCCCTGTTTCTTCGCCGTCGTCGGTTATCACCGGAAGATCTTTTGGAGTTGGGGAACAACAACAAACGCAGCAAATTCGAGGATTAATTAAACCTTCTCATGTCATTTTTGGAACTTCTCCTTCTATTACTACTTCTAATGCTCAGAGAACAAAGAAAAGGAAGAATTTGATGAAGAAAGTGTGCCATGTTCCAGCAGAAGGTCTTTCCTCTGATATGTGGGCTTGGAGAAAATATGGCCAGAAACCCATCAAAGGCTCCCCATATCCAAGGGGATATTACAGATGTAGCAGTTCGAAGGGGTGTTTAGCCAGAAAACAAGTAGAGCGCAACAGATCAGACCCTAAAATGTTCATAGTCACCTACACATCAGAACACAACCACCCTATGCCGACTCACAGGAACTCCCTCGCCGGAAGCACACGCCAAAAGCCTCTCTCCTCCGCCGGAACACCGCCAGAGCAGCCCTCCTGCTCGTCTCCCTCCGCCGCGAGTCGTTCTCCTTTGACCGAGAAGTCAGAGTCCAAGACAGAAGGGGATGATATGATCAAAGAGGAGGATGATACTAGTGAGATGGCTCTATCCGATTTGATGCTAAATGATGATTTCTACGTGGGGTTTGAGCAAATCGACGGCTCAGATGGTAGTGATTGCTTTTCAGATCATTTTTCGCCGTCGTCGGATTTTCCTTGGTTAAGCAGCAGTAGTAGTACGGCAGCCGCCGCTGGAGGGAGTTGACTTATTCCGGTATAGGTTGACTTTTAATTTTCCGGCGGGGAGGAGTTTCTAGTGGTTGTTTGTTGATGATGGTGGGATTGACTTTTTGTTCATTGACATGATGCCTTCCCACTTTAATATGGTCAACTTTTATTTTAATTAATTAAAATTTACCTTTTTGTGCTTTTTTGGAGGGGGAGGTGGGAAAAATGCTCTCACTATTTGTCAGAATCTCTGTAAGGTCACAATGGCATTGTGGATTTGGAAGGTAGTGGAGATTAACAGTAAAAAAAAGTTAGAGAGAGAAAAGAAGAGAGAGAGAAGGGATTTTTAGTTGGTAGAATCTCAATTCTCAACTAAAGTAACTTTTTTTTTTTGATATTTTTTTTATGGTGATTTGTAAGTGAATGTAATGGGAATGGTCCATTGATTGATAGGACGAGGAAGGAGAACCTTGTAGAGGGGAAAACAAAAGGGGGATAGGGTTGAGGTGCATATGCTTATAGTTATTCTTTTGTTTTTGTGAAGGAAGGGAAAAGAAAAGAAAGGAAGAGGAATAGATCATAGTAGCATAGTGGTACTCGTAGTACTTAGCAATAAAACTCATAAAGTTATTTATTTGGTATATATACTTTTTTTATTTTACAATGATTGTGCTATTTCTATTTCTGGTGTCAATTTAAATTTTAGATATACTTTTTAAATTATTCTTTTTTATTCGTTATTCTCTTTACATAACGCTACTCTCATA ATGGAAAACCCTCCAGATTGGGATCTACTCGCCGTAGTCAGAAGCTGTTGCACCACTACAACAACCACATCAGCCACCACATCAACGCCGGATCTACAACCTTCTCCACCACCACTACCACCAACACCACCACCATCTACGTCTTCCCAGTTCACCCCTCTTCCTCAACAACAGCAATTAAAACAGGAGTCATACTTTTCATCTTCATCTCCTTGTTCATCAACTGGGGGTGGTGTTCTTTTCCAGTTTTCAAACCCCTTTGAGTGTTCTTCTTCCTCAACGACGTCGTTTGAGTTGCAGGATATTTGCAAACCTTTGATTTGCTCCACCATTCACAATAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAATAACAGTAGTTGTTTCCAGTCTCTATCCTCTGTTTCCTTAGCATCCCCTGTTTCTTCGCCGTCGTCGGTTATCACCGGAAGATCTTTTGGAGTTGGGGAACAACAACAAACGCAGCAAATTCGAGGATTAATTAAACCTTCTCATGTCATTTTTGGAACTTCTCCTTCTATTACTACTTCTAATGCTCAGAGAACAAAGAAAAGGAAGAATTTGATGAAGAAAGTGTGCCATGTTCCAGCAGAAGGTCTTTCCTCTGATATGTGGGCTTGGAGAAAATATGGCCAGAAACCCATCAAAGGCTCCCCATATCCAAGGGGATATTACAGATGTAGCAGTTCGAAGGGGTGTTTAGCCAGAAAACAAGTAGAGCGCAACAGATCAGACCCTAAAATGTTCATAGTCACCTACACATCAGAACACAACCACCCTATGCCGACTCACAGGAACTCCCTCGCCGGAAGCACACGCCAAAAGCCTCTCTCCTCCGCCGGAACACCGCCAGAGCAGCCCTCCTGCTCGTCTCCCTCCGCCGCGAGTCGTTCTCCTTTGACCGAGAAGTCAGAGTCCAAGACAGAAGGGGATGATATGATCAAAGAGGAGGATGATACTAGTGAGATGGCTCTATCCGATTTGATGCTAAATGATGATTTCTACGTGGGGTTTGAGCAAATCGACGGCTCAGATGGTAGTGATTGCTTTTCAGATCATTTTTCGCCGTCGTCGGATTTTCCTTGGTTAAGCAGCAGTAGTAGTACGGCAGCCGCCGCTGGAGGGAGTTGA MENPPDWDLLAVVRSCCTTTTTTSATTSTPDLQPSPPPLPPTPPPSTSSQFTPLPQQQQLKQESYFSSSSPCSSTGGGVLFQFSNPFECSSSSTTSFELQDICKPLICSTIHNNNNNNNNNNNNNNNNNNNSSCFQSLSSVSLASPVSSPSSVITGRSFGVGEQQQTQQIRGLIKPSHVIFGTSPSITTSNAQRTKKRKNLMKKVCHVPAEGLSSDMWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPKMFIVTYTSEHNHPMPTHRNSLAGSTRQKPLSSAGTPPEQPSCSSPSAASRSPLTEKSESKTEGDDMIKEEDDTSEMALSDLMLNDDFYVGFEQIDGSDGSDCFSDHFSPSSDFPWLSSSSSTAAAAGGS Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo01593.1 vs. NCBI nr
Match: gi|902223598|gb|KNA19505.1| (hypothetical protein SOVF_060460 [Spinacia oleracea]) HSP 1 Score: 739.2 bits (1907), Expect = 3.700e-210 Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 1
BLAST of Spo01593.1 vs. NCBI nr
Match: gi|731311503|ref|XP_010669828.1| (PREDICTED: WRKY transcription factor 22 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 508.1 bits (1307), Expect = 1.400e-140 Identity = 300/400 (75.00%), Postives = 327/400 (81.75%), Query Frame = 1
BLAST of Spo01593.1 vs. NCBI nr
Match: gi|225454298|ref|XP_002276925.1| (PREDICTED: WRKY transcription factor 22 [Vitis vinifera]) HSP 1 Score: 256.9 bits (655), Expect = 5.600e-65 Identity = 140/250 (56.00%), Postives = 176/250 (70.40%), Query Frame = 1
BLAST of Spo01593.1 vs. NCBI nr
Match: gi|697098460|ref|XP_009626813.1| (PREDICTED: WRKY transcription factor 22-like [Nicotiana tomentosiformis]) HSP 1 Score: 246.1 bits (627), Expect = 9.900e-62 Identity = 144/245 (58.78%), Postives = 175/245 (71.43%), Query Frame = 1
BLAST of Spo01593.1 vs. NCBI nr
Match: gi|700201349|gb|KGN56482.1| (hypothetical protein Csa_3G121580 [Cucumis sativus]) HSP 1 Score: 244.6 bits (623), Expect = 2.900e-61 Identity = 124/196 (63.27%), Postives = 152/196 (77.55%), Query Frame = 1
BLAST of Spo01593.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJ46_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_060460 PE=4 SV=1) HSP 1 Score: 739.2 bits (1907), Expect = 2.600e-210 Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 1
BLAST of Spo01593.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FXL6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g004020 PE=4 SV=1) HSP 1 Score: 508.1 bits (1307), Expect = 9.700e-141 Identity = 300/400 (75.00%), Postives = 327/400 (81.75%), Query Frame = 1
BLAST of Spo01593.1 vs. UniProtKB/TrEMBL
Match: D7UCE2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02190 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 3.900e-65 Identity = 140/250 (56.00%), Postives = 176/250 (70.40%), Query Frame = 1
BLAST of Spo01593.1 vs. UniProtKB/TrEMBL
Match: A0A0A0L7C1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121580 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.000e-61 Identity = 124/196 (63.27%), Postives = 152/196 (77.55%), Query Frame = 1
BLAST of Spo01593.1 vs. UniProtKB/TrEMBL
Match: S5CKC4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=WRKY47 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 3.800e-60 Identity = 163/393 (41.48%), Postives = 221/393 (56.23%), Query Frame = 1
BLAST of Spo01593.1 vs. ExPASy Swiss-Prot
Match: WRK22_ARATH (WRKY transcription factor 22 OS=Arabidopsis thaliana GN=WRKY22 PE=2 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 5.100e-50 Identity = 117/212 (55.19%), Postives = 146/212 (68.87%), Query Frame = 1
BLAST of Spo01593.1 vs. ExPASy Swiss-Prot
Match: WRK27_ARATH (Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.500e-38 Identity = 84/154 (54.55%), Postives = 106/154 (68.83%), Query Frame = 1
BLAST of Spo01593.1 vs. ExPASy Swiss-Prot
Match: WRK29_ARATH (Probable WRKY transcription factor 29 OS=Arabidopsis thaliana GN=WRKY29 PE=2 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 3.700e-32 Identity = 82/155 (52.90%), Postives = 98/155 (63.23%), Query Frame = 1
BLAST of Spo01593.1 vs. ExPASy Swiss-Prot
Match: WRK35_ARATH (Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.100e-31 Identity = 95/217 (43.78%), Postives = 131/217 (60.37%), Query Frame = 1
BLAST of Spo01593.1 vs. ExPASy Swiss-Prot
Match: WRK14_ARATH (Probable WRKY transcription factor 14 OS=Arabidopsis thaliana GN=WRKY14 PE=2 SV=2) HSP 1 Score: 134.4 bits (337), Expect = 2.600e-30 Identity = 133/378 (35.19%), Postives = 177/378 (46.83%), Query Frame = 1
BLAST of Spo01593.1 vs. TAIR (Arabidopsis)
Match: AT4G01250.1 (WRKY family transcription factor) HSP 1 Score: 199.9 bits (507), Expect = 2.900e-51 Identity = 117/212 (55.19%), Postives = 146/212 (68.87%), Query Frame = 1
BLAST of Spo01593.1 vs. TAIR (Arabidopsis)
Match: AT5G52830.1 (WRKY DNA-binding protein 27) HSP 1 Score: 160.2 bits (404), Expect = 2.500e-39 Identity = 84/154 (54.55%), Postives = 106/154 (68.83%), Query Frame = 1
BLAST of Spo01593.1 vs. TAIR (Arabidopsis)
Match: AT4G23550.1 (WRKY family transcription factor) HSP 1 Score: 140.6 bits (353), Expect = 2.100e-33 Identity = 82/155 (52.90%), Postives = 98/155 (63.23%), Query Frame = 1
BLAST of Spo01593.1 vs. TAIR (Arabidopsis)
Match: AT2G34830.1 (WRKY DNA-binding protein 35) HSP 1 Score: 139.0 bits (349), Expect = 6.000e-33 Identity = 95/217 (43.78%), Postives = 131/217 (60.37%), Query Frame = 1
BLAST of Spo01593.1 vs. TAIR (Arabidopsis)
Match: AT1G30650.1 (WRKY DNA-binding protein 14) HSP 1 Score: 134.4 bits (337), Expect = 1.500e-31 Identity = 133/378 (35.19%), Postives = 177/378 (46.83%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo01593.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo01593.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo01593.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo01593.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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