Spo01331.1 (mRNA)

Overview
NameSpo01331.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr4 : 15650918 .. 15653548 (+)
Sequence length408
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTTCGTGACGAAATTGACATGAACAAGCTTCAAAATCCACCGAAAAGCAAAAAGTAAGTAATTACAATTGATTCTGATGTTTCGATTTTATTTTCGAACTAAAATGAAATCTAATTTTGCTTATTTTCGTTCTATTTCAGAAAAACGAAGATGCCGAAAGAAAAAAAGAAAACGTATGTAATTTAATTTCAGATTTCGAACATGCAACTGTTTTATTACTTAAATATTTGTTTAATTCAGTTATTTTCAGTATTTTTCTTTATAATGTTCAAATAATTTCATTATAATGGTCAATTTTTTGGTTTATGATGTTAGCAAACCCTAACTTCTGATTTTTTGGCTATAGGACTGGAAGATCTAGTGAAGAGCAAAAAATCGGGAATGCAAAGCAACCAGACATGAAGGAGTAAGTTATTTTAAGTTTTCGTAGATAAATTCATTTTAATTTACATATGTTCAATCAATTTTATGTTAATGTTCAATCGTTTTTAATTTAATGTTCATTTTCGTTGCGTGATGATTTAACCAAACCCTAACTATTGGTTTTTTGATCACAGAACTGGAAAATACGAAATTGAGAAGGAAATTGAAGCTGAAAAGCAAATAGACACATTCCAGTAAGTAATTTTTATGTTTTTGAATATCTATTTCTATTTAATTTGCGAATGTGCCGTTTTTGACATTTGATACAATACAAATACAAATTAATGATACATTGTTCATATTCATAGAGATTTAACAATAATCTTATTGATGATTAAAATTTGGATTGGGAATGTCAATTAATTTAAATATTATTATAATAATGTAAATGTGATGAACTTTTGTTGAGTTTTTCTAATCTTATGTTAGATGTTCAATTTATGTGTAAAATGTTCATATTGTTTAAGCTAGATATTCATTTTGGTCCACTGAGTTTTGTTCATTCCTCTGTAAAATAAATTAAGTCTTGAGAACTCATGATAACTATCTTATGCAAAATGTTCAATTGATTATAGCAGAATATTCAATATCTTTTTGGAAAATGATCATATATTCCAAACTGGATATCCTTTTTGGTCTACTGAGATTTTCTTTAGGAATACTGAATTATTTCGAATGTTATATATATAATTGAAATGATTTGAACATTTGTTCATTCATATGTCCAAAAACTAAATCCAGAAATCATGGTAACTGTCTGTCTCCAAAATGTTCAATATATTTTGATAAAATATTCATTTTCTTTTTATAAAATATTCAATATATTTTGATAGTTCATTTTCTTTTTATAAAATGTTCAATTTTTTTTTCTGGAATATATTTTGTTACAGAGTTTTGTTTTGGAATATACTATGAATTATTTCTAGTATTATATTCATAATGGAAATGTTCTTTGTACTAATATTCAATTTTTCTACAGTAAAATTTTAAATCTACACTCATCTGCGAAAAATGTTCAATTTATTTTGCTAAAATATTCAATTCTTTTTAATAAAATGTTCGTTTACTCTGATATACTAAGTTTGGTTTAGAAATCTTCAATTATTTCAACTACTATATTCATAATTTCAATGTTTGAACTTTTGTTCATTTCTTCAGTCCTTTTTATTATTAAAACTCATGATAACTGTTTTTATGTTAAATGTTCATTTTGTTTTCATAAAATATTCATTTCTTCAAACTGAATTTTGCTCTGGACACTCATTAGTTATACATTTATAAAATCTAGAGAACAACCACAAAGGTTAATACTCAAATTTAAGCGAAGACCAACTAAATCCCAGCCAGAGGTTCAGAAAGTATTAAGGTATAAGATAATATCATTTTTTTATTAAATTTGAATGATTTTTAATATTATATAATATAATGTGTGCATTAACATCATATTAATAAAAAATACAGTGAAGGAGATGGGAAGGCATGTACAACTTCTGAGACAGAAGTTCAAAAACCATTGAGGTATAATATAATGTCCATTTTTTTACTACATTATGCATGTAATATAAATGTTCTTTTTCTTAAAGTTATTTGTTCAATTGTGTATGGCTTAATATTCATTCATAAATTGAAAGTTTATCTCATCTGCGTTTATGAATTATGTTCAAAAAATTTCCTCCTTGTGTTCAAAGTTTTTATGAATTATGATCAAAAAATTTACTTATTATGTTTAAAGCTTCTCCTATATGTTCAAAGCTTTTCTCCATTGTTCGTTCAAATTTTTTAACCTTTATGTTCAAAGTTTTTAGTCATATGTTCAAAGCCTTTCTTTCTGTTTATATCTCAGTCAAACTATTTGGTTATATGTTCAAAGCTTTTCTCCATTTTGTTCAAAGTTTTTAACCTTTATGTTCAAAGTTTTTAGTCAAATGTTCAAATTTACCTATTATGTTTAAAACTTTTCTCCATTTTGTTCAAAGTTTATTACCTTTATGTTCAAAGTTTTTACCCTAATGTTCAAGTTTTTAGTCATGGGTTCAAATTTCACAGTATAATATAATGTCCATTTTTAGCTTTTTAAATAATTTTTTATTAATTTTATATAAAATGACTTGTACGTTTACACCTTACTATTCAAATTACAGTGAAAGAGATAAGAAATCTTCATCAAAATCACAGCCTGAAGTTCAAAAAACATCAAGGTAA

mRNA sequence

ATGGATGTTCGTGACGAAATTGACATGAACAAGCTTCAAAATCCACCGAAAAGCAAAAAAAAAACGAAGATGCCGAAAGAAAAAAAGAAAACGACTGGAAGATCTAGTGAAGAGCAAAAAATCGGGAATGCAAAGCAACCAGACATGAAGGAAACTGGAAAATACGAAATTGAGAAGGAAATTGAAGCTGAAAAGCAAATAGACACATTCCAAGAACAACCACAAAGGTTAATACTCAAATTTAAGCGAAGACCAACTAAATCCCAGCCAGAGGTTCAGAAAGTATTAAGTGAAGGAGATGGGAAGGCATGTACAACTTCTGAGACAGAAGTTCAAAAACCATTGAGTGAAAGAGATAAGAAATCTTCATCAAAATCACAGCCTGAAGTTCAAAAAACATCAAGGTAA

Coding sequence (CDS)

ATGGATGTTCGTGACGAAATTGACATGAACAAGCTTCAAAATCCACCGAAAAGCAAAAAAAAAACGAAGATGCCGAAAGAAAAAAAGAAAACGACTGGAAGATCTAGTGAAGAGCAAAAAATCGGGAATGCAAAGCAACCAGACATGAAGGAAACTGGAAAATACGAAATTGAGAAGGAAATTGAAGCTGAAAAGCAAATAGACACATTCCAAGAACAACCACAAAGGTTAATACTCAAATTTAAGCGAAGACCAACTAAATCCCAGCCAGAGGTTCAGAAAGTATTAAGTGAAGGAGATGGGAAGGCATGTACAACTTCTGAGACAGAAGTTCAAAAACCATTGAGTGAAAGAGATAAGAAATCTTCATCAAAATCACAGCCTGAAGTTCAAAAAACATCAAGGTAA

Protein sequence

MDVRDEIDMNKLQNPPKSKKKTKMPKEKKKTTGRSSEEQKIGNAKQPDMKETGKYEIEKEIEAEKQIDTFQEQPQRLILKFKRRPTKSQPEVQKVLSEGDGKACTTSETEVQKPLSERDKKSSSKSQPEVQKTSR
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo01331Spo01331gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo01331.1Spo01331.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo01331.1.exon.1Spo01331.1.exon.1exon
Spo01331.1.exon.2Spo01331.1.exon.2exon
Spo01331.1.exon.3Spo01331.1.exon.3exon
Spo01331.1.exon.4Spo01331.1.exon.4exon
Spo01331.1.exon.5Spo01331.1.exon.5exon
Spo01331.1.exon.6Spo01331.1.exon.6exon
Spo01331.1.exon.7Spo01331.1.exon.7exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo01331.1.CDS.1Spo01331.1.CDS.1CDS
Spo01331.1.CDS.2Spo01331.1.CDS.2CDS
Spo01331.1.CDS.3Spo01331.1.CDS.3CDS
Spo01331.1.CDS.4Spo01331.1.CDS.4CDS
Spo01331.1.CDS.5Spo01331.1.CDS.5CDS
Spo01331.1.CDS.6Spo01331.1.CDS.6CDS
Spo01331.1.CDS.7Spo01331.1.CDS.7CDS


Homology
The following BLAST results are available for this feature:
BLAST of Spo01331.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01331.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01331.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo01331.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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