Spo01275.1 (mRNA) | SpinachBase

Overview


Name	Spo01275.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	TCP transcription factor 19
Location	Super_scaffold_153 : 54411 .. 55103 (-)
Sequence length	693

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCACCACGAACCGCCCAAGGTAACCATGGGTTCCGAAACAACAATCCTCAGCAATCACCTATCCACCTCCGACCAACCTCAATTCGAGTCACCTGAATCACAACCATCTCTACCCTTGTCTTTCTCTCTCCCCTTTCCTCCCATGTCAATAACCTCTTCCGCCGCTAAATCCACCACTACAACCGCTTCAACCACTACAAAACTCGCAGTTTCGCGCCGCCGGGTTTCATCAACCAAAGACCGCCACACCAAGGTTAACGGCCGAGGCCGCCGCGTTCGCATGCCACCTCTCTGCGCCGCTCGAATTTTCCAGCTTACTCGCGAACTTGGGCACCGTACAGACGGGCAGACAATCGAGTGGCTACTCCGTCATGCAGAACCATCCATTATCCGAGCCACCGGTACTGGTACTGTCCCTGCCGTGGCTGATTTCACTTCTCCGGCAAAATCGTCTTCGACTCCTGCAATAGCTGCCTTGCCTCTGTCAATCGATAACGGGTGGCATTTCCCGTCACAAACCGTGGGATTAGAGTTCGGATATCGTCACATTCCGTCGTTCACCGCTCTGTTGCTGCAGCCCGATGACGGGGAGCTGCGAATGCGGCAGCAACATGAAGGGCAAGACCAAGATGAAGAACAAGGCGATCCTGCTGATTTTGCTATTGCTAAAGAAGAGGATCAAAATTAA

mRNA sequence

ATGAACCACCACGAACCGCCCAAGGTAACCATGGGTTCCGAAACAACAATCCTCAGCAATCACCTATCCACCTCCGACCAACCTCAATTCGAGTCACCTGAATCACAACCATCTCTACCCTTGTCTTTCTCTCTCCCCTTTCCTCCCATGTCAATAACCTCTTCCGCCGCTAAATCCACCACTACAACCGCTTCAACCACTACAAAACTCGCAGTTTCGCGCCGCCGGGTTTCATCAACCAAAGACCGCCACACCAAGGTTAACGGCCGAGGCCGCCGCGTTCGCATGCCACCTCTCTGCGCCGCTCGAATTTTCCAGCTTACTCGCGAACTTGGGCACCGTACAGACGGGCAGACAATCGAGTGGCTACTCCGTCATGCAGAACCATCCATTATCCGAGCCACCGGTACTGGTACTGTCCCTGCCGTGGCTGATTTCACTTCTCCGGCAAAATCGTCTTCGACTCCTGCAATAGCTGCCTTGCCTCTGTCAATCGATAACGGGTGGCATTTCCCGTCACAAACCGTGGGATTAGAGTTCGGATATCGTCACATTCCGTCGTTCACCGCTCTGTTGCTGCAGCCCGATGACGGGGAGCTGCGAATGCGGCAGCAACATGAAGGGCAAGACCAAGATGAAGAACAAGGCGATCCTGCTGATTTTGCTATTGCTAAAGAAGAGGATCAAAATTAA

Coding sequence (CDS)

ATGAACCACCACGAACCGCCCAAGGTAACCATGGGTTCCGAAACAACAATCCTCAGCAATCACCTATCCACCTCCGACCAACCTCAATTCGAGTCACCTGAATCACAACCATCTCTACCCTTGTCTTTCTCTCTCCCCTTTCCTCCCATGTCAATAACCTCTTCCGCCGCTAAATCCACCACTACAACCGCTTCAACCACTACAAAACTCGCAGTTTCGCGCCGCCGGGTTTCATCAACCAAAGACCGCCACACCAAGGTTAACGGCCGAGGCCGCCGCGTTCGCATGCCACCTCTCTGCGCCGCTCGAATTTTCCAGCTTACTCGCGAACTTGGGCACCGTACAGACGGGCAGACAATCGAGTGGCTACTCCGTCATGCAGAACCATCCATTATCCGAGCCACCGGTACTGGTACTGTCCCTGCCGTGGCTGATTTCACTTCTCCGGCAAAATCGTCTTCGACTCCTGCAATAGCTGCCTTGCCTCTGTCAATCGATAACGGGTGGCATTTCCCGTCACAAACCGTGGGATTAGAGTTCGGATATCGTCACATTCCGTCGTTCACCGCTCTGTTGCTGCAGCCCGATGACGGGGAGCTGCGAATGCGGCAGCAACATGAAGGGCAAGACCAAGATGAAGAACAAGGCGATCCTGCTGATTTTGCTATTGCTAAAGAAGAGGATCAAAATTAA

Protein sequence

MNHHEPPKVTMGSETTILSNHLSTSDQPQFESPESQPSLPLSFSLPFPPMSITSSAAKSTTTTASTTTKLAVSRRRVSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTIEWLLRHAEPSIIRATGTGTVPAVADFTSPAKSSSTPAIAALPLSIDNGWHFPSQTVGLEFGYRHIPSFTALLLQPDDGELRMRQQHEGQDQDEEQGDPADFAIAKEEDQN

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo01275	Spo01275	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo01275.1	Spo01275.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01275.1.CDS.1	Spo01275.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01275.1.exon.1	Spo01275.1.exon.1	exon

Homology

[Close]

BLAST of Spo01275.1 vs. NCBI nr
Match: gi|902182653|gb|KNA09962.1| (hypothetical protein SOVF_148690 [Spinacia oleracea])

HSP 1 Score: 444.1 bits (1141), Expect = 1.500e-121
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1


		  
Query: 1   MNHHEPPKVTMGSETTILSNHLSTSDQPQFESPESQPSLPLSFSLPFPPMSITSSAAKST 60
           MNHHEPPKVTMGSETTILSNHLSTSDQPQFESPESQPSLPLSFSLPFPPMSITSSAAKST
Sbjct: 1   MNHHEPPKVTMGSETTILSNHLSTSDQPQFESPESQPSLPLSFSLPFPPMSITSSAAKST 60

Query: 61  TTTASTTTKLAVSRRRVSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTI 120
           TTTASTTTKLAVSRRRVSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTI
Sbjct: 61  TTTASTTTKLAVSRRRVSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTI 120

Query: 121 EWLLRHAEPSIIRATGTGTVPAVADFTSPAKSSSTPAIAALPLSIDNGWHFPSQTVGLEF 180
           EWLLRHAEPSIIRATGTGTVPAVADFTSPAKSSSTPAIAALPLSIDNGWHFPSQTVGLEF
Sbjct: 121 EWLLRHAEPSIIRATGTGTVPAVADFTSPAKSSSTPAIAALPLSIDNGWHFPSQTVGLEF 180

Query: 181 GYRHIPSFTALLLQPDDGELRMRQQHEGQDQDEEQGDPADFAIAKEEDQN 231
           GYRHIPSFTALLLQPDDGELRMRQQHEGQDQDEEQGDPADFAIAKEEDQN
Sbjct: 181 GYRHIPSFTALLLQPDDGELRMRQQHEGQDQDEEQGDPADFAIAKEEDQN 230

[Close]

BLAST of Spo01275.1 vs. NCBI nr
Match: gi|731345777|ref|XP_010684094.1| (PREDICTED: transcription factor PCF1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 217.2 bits (552), Expect = 2.900e-53
Identity = 136/220 (61.82%), Postives = 158/220 (71.82%), Query Frame = 1


		  
Query: 11  MGSETTILSNHLSTSDQPQFESPESQPSLPLSFSLPFPPMSITSSAAKSTTTTASTTTKL 70
           MGSE+T  +     ++ P      S P+  L         + TSSAAKST        KL
Sbjct: 1   MGSESTTTTTIFHNNNLPS-----SDPTFSL-----LSTTTATSSAAKST--------KL 60

Query: 71  AVSRRRVSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTIEWLLRHAEPS 130
           AV+RR  +++KDRHTKVNGRGRRVRMP LCAARIFQLTRELGHRTDGQTIEWLLRHAEPS
Sbjct: 61  AVTRRS-NASKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRTDGQTIEWLLRHAEPS 120

Query: 131 IIRATGTGTVPAVADFTSPAKSSSTPAIAALPLSIDNGWHFPSQTVGLEFGYRHIPSFTA 190
           II ATGTGTVPAVA+F+SPAKSSS PA  ALPLS+D+G +FPS  V LEFGYRHIPSFTA
Sbjct: 121 IIAATGTGTVPAVAEFSSPAKSSSIPA-KALPLSVDSGCYFPSPAV-LEFGYRHIPSFTA 180

Query: 191 LLLQPDDGELRMRQQHEGQDQDEEQGDPADFAIAKEEDQN 231
           LLLQPDDG+    QQ   Q+ +++Q +      AKEE +N
Sbjct: 181 LLLQPDDGQ----QQQLQQEDEQQQQEAGVLGFAKEEIEN 195

[Close]

BLAST of Spo01275.1 vs. NCBI nr
Match: gi|567872291|ref|XP_006428735.1| (hypothetical protein CICLE_v10012754mg [Citrus clementina])

HSP 1 Score: 155.2 bits (391), Expect = 1.400e-34
Identity = 99/163 (60.74%), Postives = 114/163 (69.94%), Query Frame = 1


		  
Query: 60  TTTTASTTTKLAVSRRRVSS----TKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRT 119
           TTT ++  T+LA  R+R SS    TKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHR+
Sbjct: 21  TTTESAAKTELAHPRKRSSSSSSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRS 80

Query: 120 DGQTIEWLLRHAEPSIIRATGTGTVPAVADFTSPA----KSSSTPAIAAL--PLSIDNGW 179
           DG+TIEWLLR AEPSII ATGTGTVPAVA  +S A     SSS P+++    PLS+ +  
Sbjct: 81  DGETIEWLLRQAEPSIIAATGTGTVPAVAVSSSTAGPTPMSSSPPSLSCCVQPLSVSSQG 140

Query: 180 HFPS--------------QTVGLEF---GYRHIPSFTALLLQP 196
            F +              Q +GL+F   GYRHIP FTALLLQP
Sbjct: 141 MFLAADAEPQPNCRLDLCQPLGLQFAGNGYRHIP-FTALLLQP 182

[Close]

BLAST of Spo01275.1 vs. NCBI nr
Match: gi|568880243|ref|XP_006493041.1| (PREDICTED: transcription factor TCP11 [Citrus sinensis])

HSP 1 Score: 155.2 bits (391), Expect = 1.400e-34
Identity = 99/163 (60.74%), Postives = 114/163 (69.94%), Query Frame = 1


		  
Query: 60  TTTTASTTTKLAVSRRRVSS----TKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRT 119
           TTT ++  T+LA  R+R SS    TKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHR+
Sbjct: 21  TTTESAAKTELAHPRKRSSSSSSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRS 80

Query: 120 DGQTIEWLLRHAEPSIIRATGTGTVPAVADFTSPA----KSSSTPAIAAL--PLSIDNGW 179
           DG+TIEWLLR AEPSII ATGTGTVPAVA  +S A     SSS P+++    PLS+ +  
Sbjct: 81  DGETIEWLLRQAEPSIIAATGTGTVPAVAVSSSTAGPTPMSSSPPSLSCCVQPLSVSSQG 140

Query: 180 HFPS--------------QTVGLEF---GYRHIPSFTALLLQP 196
            F +              Q +GL+F   GYRHIP FTALLLQP
Sbjct: 141 MFLAADAEPQPNCRLDLCQPLGLQFAGNGYRHIP-FTALLLQP 182

[Close]

BLAST of Spo01275.1 vs. NCBI nr
Match: gi|225440029|ref|XP_002281963.1| (PREDICTED: transcription factor TCP11 [Vitis vinifera])

HSP 1 Score: 149.4 bits (376), Expect = 7.500e-33
Identity = 98/183 (53.55%), Postives = 117/183 (63.93%), Query Frame = 1


		  
Query: 49  PMSITSSAAKSTTTTASTTTKLAVSRRRV--SSTKDRHTKVNGRGRRVRMPPLCAARIFQ 108
           P S+T++AA +T    ST  +LA   R+   SS++DRHTKVNGRGRRVRMP LCAARIFQ
Sbjct: 18  PNSLTTAAASATAGGDSTKAELAPPPRKTASSSSRDRHTKVNGRGRRVRMPALCAARIFQ 77

Query: 109 LTRELGHRTDGQTIEWLLRHAEPSIIRATGTGTVPAVADFTS----PAKSSSTPAIAALP 168
           LTRELGHR+DG+TIEWLLR AEPSII ATGTGTVPA +  +S    P+ S++T A    P
Sbjct: 78  LTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPATSVSSSGTANPSSSTATTACKVQP 137

Query: 169 LSIDNGWHFPS---------------QTVGLEF---GYRHIPSFTALLLQPDDGELRMRQ 208
           L+     H P+               Q V LEF   GYRH+P FT+LLLQ    E   R 
Sbjct: 138 LTSVPSGHVPTGMFTMAPPSCRLDLCQPVTLEFPGNGYRHMP-FTSLLLQSGTEEAEERH 197

[Close]

BLAST of Spo01275.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QRN6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_148690 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.000e-121
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1


		  
Query: 1   MNHHEPPKVTMGSETTILSNHLSTSDQPQFESPESQPSLPLSFSLPFPPMSITSSAAKST 60
           MNHHEPPKVTMGSETTILSNHLSTSDQPQFESPESQPSLPLSFSLPFPPMSITSSAAKST
Sbjct: 1   MNHHEPPKVTMGSETTILSNHLSTSDQPQFESPESQPSLPLSFSLPFPPMSITSSAAKST 60

Query: 61  TTTASTTTKLAVSRRRVSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTI 120
           TTTASTTTKLAVSRRRVSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTI
Sbjct: 61  TTTASTTTKLAVSRRRVSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTI 120

Query: 121 EWLLRHAEPSIIRATGTGTVPAVADFTSPAKSSSTPAIAALPLSIDNGWHFPSQTVGLEF 180
           EWLLRHAEPSIIRATGTGTVPAVADFTSPAKSSSTPAIAALPLSIDNGWHFPSQTVGLEF
Sbjct: 121 EWLLRHAEPSIIRATGTGTVPAVADFTSPAKSSSTPAIAALPLSIDNGWHFPSQTVGLEF 180

Query: 181 GYRHIPSFTALLLQPDDGELRMRQQHEGQDQDEEQGDPADFAIAKEEDQN 231
           GYRHIPSFTALLLQPDDGELRMRQQHEGQDQDEEQGDPADFAIAKEEDQN
Sbjct: 181 GYRHIPSFTALLLQPDDGELRMRQQHEGQDQDEEQGDPADFAIAKEEDQN 230

[Close]

BLAST of Spo01275.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BYE2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g162100 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.000e-53
Identity = 136/220 (61.82%), Postives = 158/220 (71.82%), Query Frame = 1


		  
Query: 11  MGSETTILSNHLSTSDQPQFESPESQPSLPLSFSLPFPPMSITSSAAKSTTTTASTTTKL 70
           MGSE+T  +     ++ P      S P+  L         + TSSAAKST        KL
Sbjct: 1   MGSESTTTTTIFHNNNLPS-----SDPTFSL-----LSTTTATSSAAKST--------KL 60

Query: 71  AVSRRRVSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTIEWLLRHAEPS 130
           AV+RR  +++KDRHTKVNGRGRRVRMP LCAARIFQLTRELGHRTDGQTIEWLLRHAEPS
Sbjct: 61  AVTRRS-NASKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRTDGQTIEWLLRHAEPS 120

Query: 131 IIRATGTGTVPAVADFTSPAKSSSTPAIAALPLSIDNGWHFPSQTVGLEFGYRHIPSFTA 190
           II ATGTGTVPAVA+F+SPAKSSS PA  ALPLS+D+G +FPS  V LEFGYRHIPSFTA
Sbjct: 121 IIAATGTGTVPAVAEFSSPAKSSSIPA-KALPLSVDSGCYFPSPAV-LEFGYRHIPSFTA 180

Query: 191 LLLQPDDGELRMRQQHEGQDQDEEQGDPADFAIAKEEDQN 231
           LLLQPDDG+    QQ   Q+ +++Q +      AKEE +N
Sbjct: 181 LLLQPDDGQ----QQQLQQEDEQQQQEAGVLGFAKEEIEN 195

[Close]

BLAST of Spo01275.1 vs. UniProtKB/TrEMBL
Match: V4SSN2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012754mg PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 9.500e-35
Identity = 99/163 (60.74%), Postives = 114/163 (69.94%), Query Frame = 1


		  
Query: 60  TTTTASTTTKLAVSRRRVSS----TKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRT 119
           TTT ++  T+LA  R+R SS    TKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHR+
Sbjct: 21  TTTESAAKTELAHPRKRSSSSSSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRS 80

Query: 120 DGQTIEWLLRHAEPSIIRATGTGTVPAVADFTSPA----KSSSTPAIAAL--PLSIDNGW 179
           DG+TIEWLLR AEPSII ATGTGTVPAVA  +S A     SSS P+++    PLS+ +  
Sbjct: 81  DGETIEWLLRQAEPSIIAATGTGTVPAVAVSSSTAGPTPMSSSPPSLSCCVQPLSVSSQG 140

Query: 180 HFPS--------------QTVGLEF---GYRHIPSFTALLLQP 196
            F +              Q +GL+F   GYRHIP FTALLLQP
Sbjct: 141 MFLAADAEPQPNCRLDLCQPLGLQFAGNGYRHIP-FTALLLQP 182

[Close]

BLAST of Spo01275.1 vs. UniProtKB/TrEMBL
Match: F6HR41_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g01600 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.200e-33
Identity = 98/183 (53.55%), Postives = 117/183 (63.93%), Query Frame = 1


		  
Query: 49  PMSITSSAAKSTTTTASTTTKLAVSRRRV--SSTKDRHTKVNGRGRRVRMPPLCAARIFQ 108
           P S+T++AA +T    ST  +LA   R+   SS++DRHTKVNGRGRRVRMP LCAARIFQ
Sbjct: 18  PNSLTTAAASATAGGDSTKAELAPPPRKTASSSSRDRHTKVNGRGRRVRMPALCAARIFQ 77

Query: 109 LTRELGHRTDGQTIEWLLRHAEPSIIRATGTGTVPAVADFTS----PAKSSSTPAIAALP 168
           LTRELGHR+DG+TIEWLLR AEPSII ATGTGTVPA +  +S    P+ S++T A    P
Sbjct: 78  LTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPATSVSSSGTANPSSSTATTACKVQP 137

Query: 169 LSIDNGWHFPS---------------QTVGLEF---GYRHIPSFTALLLQPDDGELRMRQ 208
           L+     H P+               Q V LEF   GYRH+P FT+LLLQ    E   R 
Sbjct: 138 LTSVPSGHVPTGMFTMAPPSCRLDLCQPVTLEFPGNGYRHMP-FTSLLLQSGTEEAEERH 197

[Close]

BLAST of Spo01275.1 vs. UniProtKB/TrEMBL
Match: G7IA90_MEDTR (TCP family transcription factor OS=Medicago truncatula GN=MTR_1g063870 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.900e-33
Identity = 101/192 (52.60%), Postives = 120/192 (62.50%), Query Frame = 1


		  
Query: 48  PPMSITSSAAKSTTTTASTTTKLAVSRRRVSSTKDRHTKVNGRGRRVRMPPLCAARIFQL 107
           P  ++T++ A   TT++   TKL V R    STKDRHTKVNGRGRRVRMPPLCAARIFQL
Sbjct: 20  PSTAVTTTVA---TTSSDPNTKLTVRRPASRSTKDRHTKVNGRGRRVRMPPLCAARIFQL 79

Query: 108 TRELGHRTDGQTIEWLLRHAEPSIIRATGTGTVPA-VADFTSPAKSSSTPAIA------- 167
           TRELGHR+DG+TIEWLLRHAEPSII ATGTGTVPA     +SP  SSS P+++       
Sbjct: 80  TRELGHRSDGETIEWLLRHAEPSIIAATGTGTVPAGPVSTSSPFTSSSLPSVSCHVQPAT 139

Query: 168 ------------ALPLSIDNGWHFPSQTVGLEFG----YRHIPSFTALLLQP-DDGELRM 215
                       ALP+   +     SQ  G+++G    Y H+P FT LLLQP   GE   
Sbjct: 140 TVGPGGGGIFGMALPMQPPSCRLDLSQPAGMDYGTASRYHHMP-FTTLLLQPTTTGE--- 199

[Close]

BLAST of Spo01275.1 vs. ExPASy Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.800e-26
Identity = 74/148 (50.00%), Postives = 89/148 (60.14%), Query Frame = 1


		  
Query: 2   NHHEPPKVTMGSETTILSNHLSTSD-QPQFESPESQPSLPLSFSLPFPPMSITSSAAKST 61
           NH + P  +  S    L  H   S  QPQ +S +SQP       L     S   +A K  
Sbjct: 52  NHQQQPSPSSSSSLFSLHQHQQLSQSQPQSQSQKSQPQTTQKELLQTQEESAVVAAKKPP 111

Query: 62  TTTASTTTKLAVSRRRVSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTI 121
              AST              KDRHTKV+GRGRR+RMP LCAAR+FQLTRELGH++DG+TI
Sbjct: 112 LKRAST--------------KDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETI 171

Query: 122 EWLLRHAEPSIIRATGTGTVPAVADFTS 149
           EWLL+ AEPS+I ATGTGT+P  A+FTS
Sbjct: 172 EWLLQQAEPSVIAATGTGTIP--ANFTS 183

[Close]

BLAST of Spo01275.1 vs. ExPASy Swiss-Prot
Match: PCF1_ORYSJ (Transcription factor PCF1 OS=Oryza sativa subsp. japonica GN=PCF1 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.000e-25
Identity = 80/178 (44.94%), Postives = 109/178 (61.24%), Query Frame = 1


		  
Query: 22  LSTSDQPQFESPESQPSLPLSFSLPFPPMSITSSAAKSTTTTASTTTKLAVSRRRVSSTK 81
           +++SD   +    +QP  P +   P P +SI  +AA+  ++  +T  +  V  R+  S+ 
Sbjct: 2   MASSDLILYNLVPAQPLNPSAIPNPNPDLSI--AAAEPPSSDGATPRR--VRPRKSPSSS 61

Query: 82  DRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTIEWLLRHAEPSIIRATGTGTVP 141
           DRH+KV GRGRRVR+P + AAR+FQLTRELGHRTDG+TIEWLLR AEPSII ATGTG  P
Sbjct: 62  DRHSKVAGRGRRVRIPAMVAARVFQLTRELGHRTDGETIEWLLRQAEPSIIAATGTGVTP 121

Query: 142 AVADFTSPAKSSSTPAIAALPLSIDNGWHFPSQTVGLEFGYRHIPSFTALLLQPDDGE 200
             A   + A  SS+ A AA       G H  +        + H+P +TALL+QP + +
Sbjct: 122 EEAPPAAVAIGSSSVAAAAAA-----GGHGGA--------FVHVPYYTALLMQPPNAD 162

[Close]

BLAST of Spo01275.1 vs. ExPASy Swiss-Prot
Match: TCP11_ARATH (Transcription factor TCP11 OS=Arabidopsis thaliana GN=TCP11 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.600e-25
Identity = 70/132 (53.03%), Postives = 83/132 (62.88%), Query Frame = 1


		  
Query: 80  TKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTIEWLLRHAEPSIIRATGTGT 139
           TKDRHTKVNGR RRV MP L AARIFQLTRELGH+T+G+TIEWLL  AEPSII ATG GT
Sbjct: 43  TKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAEPSIIAATGYGT 102

Query: 140 ------VPAVAD-------FTSPAKSSSTPAIAALPLSIDNGWHFPSQTVGLEF---GYR 196
                 V   AD        TSP   + TP   +  L +        Q +G+++   GY 
Sbjct: 103 KLISNWVDVAADDSSSSSSMTSPQTQTQTPQSPSCRLDL-------CQPIGIQYPVNGYS 162

[Close]

BLAST of Spo01275.1 vs. ExPASy Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.700e-25
Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 1


		  
Query: 50  MSITSSAAKSTTTTASTTTKLAVSRRRVSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTR 109
           +SI   +     +T +TT+  A +     STKDRHTKV+GRGRR+RMP LCAAR+FQLTR
Sbjct: 30  LSIVPRSTPPEDSTLATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTR 89

Query: 110 ELGHRTDGQTIEWLLRHAEPSIIRATGTGTVPAVADFTSPAKSSSTPAIAALP 163
           ELGH++DG+TIEWLL+ AEP+I+ ATGTGT+PA     S +  SS   ++A P
Sbjct: 90  ELGHKSDGETIEWLLQQAEPAIVAATGTGTIPANFSTLSVSLRSSGSTLSAPP 142

[Close]

BLAST of Spo01275.1 vs. ExPASy Swiss-Prot
Match: TCP15_ARATH (Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 9.800e-25
Identity = 70/152 (46.05%), Postives = 97/152 (63.82%), Query Frame = 1


		  
Query: 36  QPSLPLSFSLPFPPMSITSSAAKSTTTTASTTTKLAVSRRRVSSTKDRHTKVNGRGRRVR 95
           +P+ PL         S TS A  STT+  ++  K    +R  +STKDRHTKV GRGRR+R
Sbjct: 10  RPNFPLQLLDSSTSSSSTSLAIISTTSEPNSEPKKPPPKR--TSTKDRHTKVEGRGRRIR 69

Query: 96  MPPLCAARIFQLTRELGHRTDGQTIEWLLRHAEPSIIRATGTGTVPAVADFTSPAKSSST 155
           MP +CAAR+FQLTRELGH++DG+TIEWLL+ AEP++I ATGTGT+PA     + +  SS 
Sbjct: 70  MPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSR 129

Query: 156 PAIAALPLSIDNG---WHFPSQTVGLEFGYRH 185
            +++A  L        +H P Q++     ++H
Sbjct: 130 SSLSAAHLRTTPSSYYFHSPHQSMTHHLQHQH 159

[Close]

BLAST of Spo01275.1 vs. TAIR (Arabidopsis)
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14)

HSP 1 Score: 119.0 bits (297), Expect = 3.800e-27
Identity = 74/148 (50.00%), Postives = 89/148 (60.14%), Query Frame = 1


		  
Query: 2   NHHEPPKVTMGSETTILSNHLSTSD-QPQFESPESQPSLPLSFSLPFPPMSITSSAAKST 61
           NH + P  +  S    L  H   S  QPQ +S +SQP       L     S   +A K  
Sbjct: 52  NHQQQPSPSSSSSLFSLHQHQQLSQSQPQSQSQKSQPQTTQKELLQTQEESAVVAAKKPP 111

Query: 62  TTTASTTTKLAVSRRRVSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTI 121
              AST              KDRHTKV+GRGRR+RMP LCAAR+FQLTRELGH++DG+TI
Sbjct: 112 LKRAST--------------KDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETI 171

Query: 122 EWLLRHAEPSIIRATGTGTVPAVADFTS 149
           EWLL+ AEPS+I ATGTGT+P  A+FTS
Sbjct: 172 EWLLQQAEPSVIAATGTGTIP--ANFTS 183

[Close]

BLAST of Spo01275.1 vs. TAIR (Arabidopsis)
Match: AT2G37000.1 (TCP family transcription factor )

HSP 1 Score: 117.1 bits (292), Expect = 1.400e-26
Identity = 70/132 (53.03%), Postives = 83/132 (62.88%), Query Frame = 1


		  
Query: 80  TKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRTDGQTIEWLLRHAEPSIIRATGTGT 139
           TKDRHTKVNGR RRV MP L AARIFQLTRELGH+T+G+TIEWLL  AEPSII ATG GT
Sbjct: 43  TKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAEPSIIAATGYGT 102

Query: 140 ------VPAVAD-------FTSPAKSSSTPAIAALPLSIDNGWHFPSQTVGLEF---GYR 196
                 V   AD        TSP   + TP   +  L +        Q +G+++   GY 
Sbjct: 103 KLISNWVDVAADDSSSSSSMTSPQTQTQTPQSPSCRLDL-------CQPIGIQYPVNGYS 162

[Close]

BLAST of Spo01275.1 vs. TAIR (Arabidopsis)
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 115.9 bits (289), Expect = 3.200e-26
Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 1


		  
Query: 50  MSITSSAAKSTTTTASTTTKLAVSRRRVSSTKDRHTKVNGRGRRVRMPPLCAARIFQLTR 109
           +SI   +     +T +TT+  A +     STKDRHTKV+GRGRR+RMP LCAAR+FQLTR
Sbjct: 30  LSIVPRSTPPEDSTLATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTR 89

Query: 110 ELGHRTDGQTIEWLLRHAEPSIIRATGTGTVPAVADFTSPAKSSSTPAIAALP 163
           ELGH++DG+TIEWLL+ AEP+I+ ATGTGT+PA     S +  SS   ++A P
Sbjct: 90  ELGHKSDGETIEWLLQQAEPAIVAATGTGTIPANFSTLSVSLRSSGSTLSAPP 142

[Close]

BLAST of Spo01275.1 vs. TAIR (Arabidopsis)
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 115.2 bits (287), Expect = 5.500e-26
Identity = 70/152 (46.05%), Postives = 97/152 (63.82%), Query Frame = 1


		  
Query: 36  QPSLPLSFSLPFPPMSITSSAAKSTTTTASTTTKLAVSRRRVSSTKDRHTKVNGRGRRVR 95
           +P+ PL         S TS A  STT+  ++  K    +R  +STKDRHTKV GRGRR+R
Sbjct: 10  RPNFPLQLLDSSTSSSSTSLAIISTTSEPNSEPKKPPPKR--TSTKDRHTKVEGRGRRIR 69

Query: 96  MPPLCAARIFQLTRELGHRTDGQTIEWLLRHAEPSIIRATGTGTVPAVADFTSPAKSSST 155
           MP +CAAR+FQLTRELGH++DG+TIEWLL+ AEP++I ATGTGT+PA     + +  SS 
Sbjct: 70  MPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSR 129

Query: 156 PAIAALPLSIDNG---WHFPSQTVGLEFGYRH 185
            +++A  L        +H P Q++     ++H
Sbjct: 130 SSLSAAHLRTTPSSYYFHSPHQSMTHHLQHQH 159

[Close]

BLAST of Spo01275.1 vs. TAIR (Arabidopsis)
Match: AT2G45680.1 (TCP family transcription factor )

HSP 1 Score: 113.6 bits (283), Expect = 1.600e-25
Identity = 63/112 (56.25%), Postives = 76/112 (67.86%), Query Frame = 1


		  
Query: 33  PESQPSLPLSFSLPFPPMSITSSAAKSTTTTASTTTKLAVSRRRVSSTKDRHTKVNGRGR 92
           P+++P +P SFS+   P S T    K                   +STKDRHTKV GRGR
Sbjct: 47  PKAEPVMP-SFSMSLAPPSSTGPPLKR------------------ASTKDRHTKVEGRGR 106

Query: 93  RVRMPPLCAARIFQLTRELGHRTDGQTIEWLLRHAEPSIIRATGTGTVPAVA 145
           R+RMP  CAARIFQLTRELGH++DG+TI WLL +AEP+II ATGTGTVPA+A
Sbjct: 107 RIRMPATCAARIFQLTRELGHKSDGETIRWLLENAEPAIIAATGTGTVPAIA 139

The following BLAST results are available for this feature:

BLAST of Spo01275.1 vs. NCBI nr
BLAST of Spo01275.1 vs. UniProtKB/TrEMBL
BLAST of Spo01275.1 vs. ExPASy Swiss-Prot
BLAST of Spo01275.1 vs. TAIR (Arabidopsis)

BLAST of Spo01275.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902182653\|gb\|KNA09962.1\|	1.5e-121	100.	hypothetical protein SOVF_1486...	[more]
gi\|731345777\|ref\|XP_010684094.1\|	2.9e-53	61.8	PREDICTED: transcription facto...	[more]
gi\|567872291\|ref\|XP_006428735.1\|	1.4e-34	60.7	hypothetical protein CICLE_v10...	[more]
gi\|568880243\|ref\|XP_006493041.1\|	1.4e-34	60.7	PREDICTED: transcription facto...	[more]
gi\|225440029\|ref\|XP_002281963.1\|	7.5e-33	53.5	PREDICTED: transcription facto...	[more]

BLAST of Spo01275.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QRN6_SPIOL	1.0e-121	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BYE2_BETVU	2.0e-53	61.8	Uncharacterized protein OS=Bet...	[more]
V4SSN2_9ROSI	9.5e-35	60.7	Uncharacterized protein OS=Cit...	[more]
F6HR41_VITVI	5.2e-33	53.5	Putative uncharacterized prote...	[more]
G7IA90_MEDTR	8.9e-33	52.6	TCP family transcription facto...	[more]

BLAST of Spo01275.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
TCP14_ARATH	6.8e-26	50.0	Transcription factor TCP14 OS=...	[more]
PCF1_ORYSJ	2.0e-25	44.9	Transcription factor PCF1 OS=O...	[more]
TCP11_ARATH	2.6e-25	53.0	Transcription factor TCP11 OS=...	[more]
TCP8_ARATH	5.7e-25	54.8	Transcription factor TCP8 OS=A...	[more]
TCP15_ARATH	9.8e-25	46.0	Transcription factor TCP15 OS=...	[more]

BLAST of Spo01275.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G47620.1	3.8e-27	50.0	TEOSINTE BRANCHED, cycloidea a...	[more]
AT2G37000.1	1.4e-26	53.0	TCP family transcription facto...	[more]
AT1G58100.1	3.2e-26	54.8	TCP family transcription facto...	[more]
AT1G69690.1	5.5e-26	46.0	TCP family transcription facto...	[more]
AT2G45680.1	1.6e-25	56.2	TCP family transcription facto...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 79..197 score: 2.4
IPR017887	Transcription factor TCP subgroup	PROFILE	PS51369	TCP	coord: 80..134 score: 26
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 40..160 score: 6.6
None	No IPR available	PANTHER	PTHR31072:SF25	SUBFAMILY NOT NAMED	coord: 40..160 score: 6.6