Spo01217.1 (mRNA)

Overview
NameSpo01217.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr2 : 58139097 .. 58139889 (+)
Sequence length237
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCGGTGGTAACTGGAAAGGTAACCGTAACAGTAGCAGCCAAGGAAGAATACGGAACGCGCACACAAAAACACACACCTCTTCTTACCTTCCACCATTTCACTCTTTTCGAGACTTTTCCTTTCTCTTTCTCTCTCTCTCTCTTTCTTCTTTAATTTGGTTTTTCTTCCATTAATTATTCATTCATTACCAGTAAATTCAATTCAATTTAATTTCAATTTTAAAATCCCCCATGTGATTACTACTCCGTTTGTCCTGGTATTTATCTGTTCCATTTTCCACCATTATTTTATACACACGACCCCTTCTCTTCTTCCTTCCACTTTGGAGAGAGAAAGTGGAGAGAGAAACACCAAAACTGTGAATTCTCCAAGAATCCCAACTTCTTCTCCCCAGGTTAGTGTCTTCGCAAATCCCTACCCACCTTATTCGCTTTTTTGTTTGCTTCCCACTTTATTTTTCTCCATTTTTTATACTTTATGTGTTCACATTCTTTGTTTTTCTGGGTAATTATGTTTTCATATTATTATATTTTTTCTTCTTCTTGAAATTGGTTTTGCTCCCTTTTCGCCGTGATCTATGTGTGTTTTCTTCCTTCTATTCTGATAATTAATTATTCATTTTGTACTGGGTTGATGCTGATTTTTTTTTAATATAATTACTTTTAGTCAATTTTTATTTGAATTATGTTCAATTAGTTAGAATTGGGATCTGTGTTTTGTGGGTTGATAACTTGATATGATAAACTGAAAATTTTGTTCGCCTTTTTGTTTGTATAGAGAACTGAATAG

mRNA sequence

ATGAGCGGTGGTAACTGGAAAGTAAATTCAATTCAATTTAATTTCAATTTTAAAATCCCCCATGTGATTACTACTCCGTTTGTCCTGGTATTTATCTGTTCCATTTTCCACCATTATTTTATACACACGACCCCTTCTCTTCTTCCTTCCACTTTGGAGAGAGAAAGTGGAGAGAGAAACACCAAAACTGTGAATTCTCCAAGAATCCCAACTTCTTCTCCCCAGAGAACTGAATAG

Coding sequence (CDS)

ATGAGCGGTGGTAACTGGAAAGTAAATTCAATTCAATTTAATTTCAATTTTAAAATCCCCCATGTGATTACTACTCCGTTTGTCCTGGTATTTATCTGTTCCATTTTCCACCATTATTTTATACACACGACCCCTTCTCTTCTTCCTTCCACTTTGGAGAGAGAAAGTGGAGAGAGAAACACCAAAACTGTGAATTCTCCAAGAATCCCAACTTCTTCTCCCCAGAGAACTGAATAG

Protein sequence

MSGGNWKVNSIQFNFNFKIPHVITTPFVLVFICSIFHHYFIHTTPSLLPSTLERESGERNTKTVNSPRIPTSSPQRTE
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo01217Spo01217gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo01217.1Spo01217.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo01217.1.exon.1Spo01217.1.exon.1exon
Spo01217.1.exon.2Spo01217.1.exon.2exon
Spo01217.1.exon.3Spo01217.1.exon.3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo01217.1.CDS.1Spo01217.1.CDS.1CDS
Spo01217.1.CDS.2Spo01217.1.CDS.2CDS
Spo01217.1.CDS.3Spo01217.1.CDS.3CDS


Homology
The following BLAST results are available for this feature:
BLAST of Spo01217.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo01217.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo01217.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo01217.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
back to top