Spo01030.1 (mRNA) | SpinachBase

Overview


Name	Spo01030.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Transcription initiation factor TFIID TATA-box-binding protein
Location	chr5 : 29446125 .. 29458117 (-)
Sequence length	1457

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCTCAATCATTCAAATTTCTTTGACCCTTCTTTTTTGCTCTTTCTTTCTCTCTCCTCTTCTGCCTTTTTATCGGCGATTTCCCAGATCTGCGAACTCCACCTGCTCAATTCACGATCAGATCATCTCTGCGACTGTAGAACCAGTGAGCTCTCTCTATTTTCCACTCTCTCTCTCCCCTCTTCATCTCTTTCTGAAACAATAATATATGGCAATTAGATGAATTAAAGCGACGAATTGATCCACAGTTTTCAACTTTTCTTCGATTTTACTGAAACCTTAATTATGTTGAGGAATTCAATAATTTTCTTGAAATACCCACTTGTTTATATGGAACAATTTTGGTTAATTATGCAAGATGATGAACTGGGTAATTTTTCTTTTTTTCTTTTTAGAAATTAGATTGAGAGTAATTGAGAATTAAACCACAAGGACTTCAGTAATTTGGGTATTTGGAATTTAATTTTAATTTTAATTTTACCGAGAAGCAGTTAACTCATGATTAATGTTGTTAAGTTTTTCCCCAATTTGATTTTGAATAGGAGAAGAGAAAGGGGGATTAATATGGAAGAACAGGGCTTGGAAGGTGTTCAACCTGTGGATCAGTCCAAACATCCATCTGGGATCATCCCTACTCTCCAGTAAGTTTGATTGGATTTGTGTTTTTTAACCTGAAATCAGGGCTTATGTTAAACTTAGCTAAATTTGANTATTTAGTTTAACTAGTTGTTGGCCGCCGTCCCCCAAGTTAGCCAAAAAAAAAAAGCGAAATTATTATTGTCATAATTCAGTAATTAAAATTTGAAAGCTTTTCCAGATTATTATTATAGTATTAATATAGTAATTACAATAGTGATTTATGGTATTTTTCAAAGCGGGAGCATACAACACATTGACAACGTAAGCTTTTCGCCTACTTCTTCACAAAACGACACAGTTTTGAAAGTGTACAAGGAACTAAAGGGAGTGACATCATAGTTAAAATAAGTATAGAATACAATAACTATTCTCTTCCATAGCNTAGTAATTACAATAGTGATTTATGGTATTTTTCAAAGCGGGAGCATACAACACATTGACAACGTAAGCTTTTCGCCTACTTCTTCACAAAACGACACAGTTTTGAAAGTGTACAAGGAACTAAAGGGAGTGACATCATAGTTAAAATAAGTATAGAATACAATAACTATTCTCTTCCATAGCTGCAAAAATATTTACTGAAGCACTGACAAAGATTCTTAACGAATACAATACCAAAAGACCGATCAAAAATAACAAGCCTGTCCCAATATCTTATTTTGCAAACTAAAATGCTAACACAATGCCACTGCCGATTCCGGATCCCCTGATATCCTTGTTAGGGTAAGCCTCATCAACCTTGCAGGACATTTGTCTGACATTATTCAGCTGATAAGGGAAGATGAGGGCTTAGGAGAGAGGAGAGTCCTACTCCTGGATTGGTGTATTGATATTGAAATGGTGATATAGAAACCGCGGTTGACATCTGCGTGCTAAGGCTAAGTGATAATCCTTGCAAATTCTGTTCACCATCAACCAATACCATACTCATCTGACTTCTAGATGTCAATTGAAGTTCCCCCAGCAAAGAATTACCCACGTTTTCACTCATGGACTGAATACACATAAAATCCCCCGGTAGGTGGGATAAACATCATCTCATTTCTACCATTCATCTCAACACCATTTTGGGGATTCATTGGTGAAATCTCTGAGAATGAACCAGGTGAAGATGTAAGATATATCATCATGTTGCCATGGAGAAGAGGTGACTCAGAGTATGATGCAAATTTTTGGTCCCTGACATAAGGTGCTGACAGGACATCTAGCTGACCACTTGAACTCGGGTAATAAGTTGCCATTTTGGTGTGAATTCTATCTTACTAATTCTCAAAAACAAGCACAATTCCAACAGTAGAAACATCAGCAGATATCTTGATATGTCATATGATCACAGTTCATGGACCAGTAACAACCTAAGATCAAACTGTAAAATGCATAGTAACGATATCCATAAATAACAACTCCGTACGTTGTAAATAAATTGTTTAGATCATAACTTCAAAGAGTTTGTCTTTTAATTACTAAGTTTGGCTACGTTTACACGAGATCATTAAACTTTTGAAGAAATTAAATTTAAATTCCTAATATTTTCATAAACATCTAAGTTCGTTACTTCTTGTTATAATACAAATTACGACCACCATCATCATTCGAGAACTGGCCTTCCAAGCAAGAATCCATCATTGTTTGAATGTTCCTGTCACGAATCAAGTCAAGAGCCTGAAAAATATCAAGTGATGTTCAGACGAGCTACCATATTAGACACAGAACACCACCAAAAATTTACATTTCTGCAAGAAAATCACAGACTTTATAGTTATAGCATCCTATATATCAAACATTTCCACGAACTCATGTATTTTATTGTCACATGCAAGCTGAAATTTCCTTAATGAATATCATTGCCACCCCACCTTGAATCAGAAACTCAAACACTTTTCTGCCTTACCTAGATTAGATCAAACAAAATAAGAATAGAAAATAAGAGTCAAACAAGAGACTTACATGGCTTGGAGGGATATGCTTTCCGCTTAACAGATCAAGCAAAAGGGTTCCAAAACTATATATCAAGCTCTCTGGGGTCACCCTACCCATCAAAAGTAACAAGTACAAAGCCATCACATGTACAGACATCAAGTTAGTCATTCATGATAATCAATCAAATACAAAGCAGGTATTTAAACAAAAAACTGATGCACGTAAGGCTATACTTGATTGAACACATATTTGATCTTTAAAATTGTGATTAGTCCGTGATATTTTTATTTTCTGATAACGATTCTTTCCCTAAGAAAAGGGAAGATGGAACTCGTGAAAATATTCGATTGCAAGTGGGGGTGAATGAACACTATATGAAAGTCTGGCTGTACACATGCCTCGAAAATGGAAAAATAGATTCTCATATCAAGAATGACAGAAGCATCACTCTCTGGTGAAGGCCCTATTCCCAGAAAAATCAGACCCACTGAATTTATTATACCAACTCTAATGTCAGATTATATATTCTCTATGTTACGACAATGAAGAATATTTTAGTTTGACATCATTGAAATGGCAACCACTTACCATTCCTCAAATACTCGGGTGGAGTAAAGGCCAAATTTGTACTGTAGCTTTTCCCATCTCTACTATTTTTCATCAAACCAAAGCAGGAAAGTCTAGGATCACCTTCCTACAAAAGCAATAAAGAGAAAAAACTATAACACAAGAATGAAGGATCTAAAACATTAAAATAAAGTACGGAATTTACTTTTTTGATGGGAGTATAGATATAATTTTAGCTATCTTTTCATGTAATAGAACTCCTTTCGTATAGCAGGGATACACTTAAAAGTTCCTTCCTAAATAATGATAAAGTAAGCACCCAAAACCTGAATAGGTAAATTGCATTTAAACATAACAAAGCATGTTCTCCAATTTATCAAGTAGGTCATCAAAATTTAACGCGTCTGAGGGAGCTAGAAAGAGCTCCTCTAGGAACCAAAATGTTTGCCAAAATAACCAAATGTTAATCTCGGATACAGGGTCTAAGCTGTTCCATGTGCTTAACCCCCGCGGAAGATATTAATAAGTGTATGCATGATGCAAATCATGGGATACCACAATAACAGACTGAAGCAAAGCTGGTTTCATTTTTCTCCTAGGTACTGCAACTTCAATTGACAGTAGTTTCATAACAAAATCTTACCAAGTTTACGTGCCTCTTCCAGTGGCAGCTCCTAAACATGCCTAGCGTGAGGACTAAATGCAACGAGGAAAACTTTACCACCTCCTTCCAACGATCTTCTCAACTTTCAAACGCGCATTGTTCTGTTAAACCCGTGGATTTCAGAACCTCGGAAGAAAATGTCGGTCCCTTTACCAGCAACCAGATTTTTTATGTTTAATATTTTAGTAACTCTAGCTCTTATCTCTCTATGTCCTCAATTTTTTCGTTCTCTTCCTCTATCTCTCATCTTCTTTTCTCTATGCCTCTCTGCTGCTATGTCTTTCTATCATTTTTTCTCATTTTCTCTAATTTGTCTCTCATCAATTCAAACTTAAATGAAATGAATTCAAAACCATAATTTTCAGAAGAACTGAAAGAGTAAGGTGAATCACGAAAATATATTATTACCAGGAAAAGAAAACTACAAGAAAAATCACTAAGAATGAAGAAGCTCTAGAAAAACCAAAACAGTAATTCTAATCTCACAATTAGAAAGATGGGAAAATATATTTATAAAAATTAGTACCTTGCACAATGGCTTTGATTTGGGGAGAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCATCCCAGCATAGAAAACATCGACGTGCATCTGCACGGTTCAAATTGAGGAATAGACATGTTCTTCTCCCTATTGAGCTCATGCGCACTGGATATGATTTCAAAAAACACAAAACAAAGTCAAAGAACCAAACTTTAGCAGCCCAAAGAAACAAACTGAGAGGATATAAAGCTTCTAGAATGTAATACAAGAGATATCAAGCCTGAAAGACCAGGCATTGATATCTTCAAATATATAAACAACGTGAGCAAAGAAGAGGGCTAACCATGGTAAACCTAACAATCAATATGAAAACTGAAACGACCCGCACTCAAAAGGGGTTATGAGAAAGATTTTAAACATCAGCGAAGGAAAGTGAGGAAATATTTGGCCTTTTCTTGACAATTACAAATCAAATGCAAGAGAAATGATTCTACATAAATGATAAAAGTGAAATCAAATTCTCTGAAAGCAACACAAACCAGAGGTAACAAAAGTAAAAACACATACATGCACAATCACTCAAAAAGTGATCAAATCACCTAAAATATGTACATCTCATATCCAATTTTCCCCACTATACCATCGACGCTGGTGAGGGGAAAGCTCTTTATATCAAGCAACTTATGAACACAAATAACGCAACTGGTCAACAGCTAGCAAAAACGTTTTGGATACTACATTATGTTCGTTGTTCTTCCCGGTGTCGACTTACAAAACATAAAATAAGTTAAGTAAGCTAATGTTTGTGCCCTCCTATTCCACTTACAACTAAAACTTCCTACAGAACACTTCTTTATTCTTCTAATCCTACTTGTATTCAAACGAACAACCATCAAAATACACATCGACTTGTTCAATTTCATACCGATACTCGAAATTGACCCCAACAACAACAACAACAAAAATTAAAAACCCCTGAATTAATTATTCTAAAACCAATTAATCAATGACCGACGCTTGCAATAAAATCAGACATAAGAACCCTAAAAGGCTGACTCCAACAAGCTACTTATGCCGATTTATCAAATTAAATAGACCATTAATTGACATTTCTAAATAAAATAATTGAAAAAATTGAGATTAAAACTCAAACCTTGGAAGGGTCAACTTTCTGGAAGTTCTTGGCGAGGTAATGACACGATCAACAACCTCAGATTTGTTGAGGAAGGAACATCGGTCCTCATCAGGAAAGTGGCGGTGAGAGAAGAGGAGGTTGAAGGAAGACGAAACCGAAGATGGAGAATGTTTTAGAATTGAGCCCATTTCTCTCAAAAGGTGTTTCCATCTTTGGTGAGCTTACTATCACCGGAATTGCCCCTGCAAATGAAATACAACAATTTTTATGAAGAGTTAGTTAATTAACAATTAAATTACTGAAATTAGGCCATTAAAAAAGAAAAAAATTGAGATGTTTAAGATACCTAAAGCCAAACCCTAAGTTTCAAGAACTCTGCCTAAATCCTAAATCCAATCCTTAAACCAAACTGAAATAAAAAAAAAAACGGATTTTTCATGAAATGCCCCTGAGGTTTGCCTTAATGCACAAAATACCCCTAAACTTTCCAGAATGCACCAAATACCCCCGAGGTTTAGTATAAATACACAAAATGCCCAAAAGGCTAACGAACGTTAAGTCCCCGTTAGCGTATGTTTACCTTTTTGCCCTTAATAAATCGTTTTATCTATTTATCCTAACATTAACCCTTAATTACATAAATTAACCCTTAATTACATTAATAAACCTTAATTAAATTAATTAAACTCTTAACAAATTAATTAACTATTATCTAAAAAAATCAAAAATCAAAAATCAATTACCCCCAATTTTTTTTGGATTCTCCATTGCTGCTCTTCTCTCGATTTTCTCTGTCTTCACCACCTTCTTTCTCTCCAATCCCTTCTTCAAACCCATCACTCAAAACCCCATTTTCTCCCTTCTCTCACACACCCAAATCGATTGAACAAGACCAAAACCGAGGCTCAGATCTGCTGCAAAGTTTCTCGCGACGATCTGGGCATGCCTTTGGTCCGCTGGAGCACGCTGGTGTTGGTGGCGGTGTGTGGTGTTGGTTGCGGTGTGTGGTGTTGGTGAGGAAGAGACGGGATGGTGTCGGTGGTGAGGAAGAGAAGGCGTTGGTGTCGGTGGCGGTGTGGGGTGGTGGTGAGGAAGATAAGGGGTTAGCTAGCGGGGCGGTGTGTGGTGGTGGTGAGGAAGAGCAGGGCTGGTGTCGGTGGCGGTGTGGGGTGGTGGTGAGGAAGAGAAGGGGTTAGCGGGACGGTGTTTAGTGGTGGTGGTGAGGAAGAGAAGGGCCCTTCCTTCTTCCTGCCATGGAAGCCAGTTGCTTCCACCTCCACAACTTCACAGGAATTTAATCACCATCTTCATACCCATCAAACAACAACAAAGATTTTCTCTCTTTTCCCAACAAACAATTAGATTAAGATGCAAATTTGATGATTTTCGTTCTCAATTGAGAAATCCCATTGGAACATGGTGGTGATATGGGCTTCCATGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAAAATAAATCAAAGAGGCTAACCCAGAAAGACGAAGAAACAATAAAGCATGTTCAATTAACAAAGGAACTCACGAAAAACTACAATTTATTAATAACTCCAATCGACAAAGCAATTCAGCTTTTATGTTTTACCCATCATCTAAATCTTTGTAAATACCCTAATTATTAATCATAATATTCTACAATCATCTGAGGACTGATCAACATAATTACACACAAAAACCAAAAATAAATCAAAAACCTTCTTTCTCAAAATGTGAAATCAAATGATTACACTTTTCTCATACACAAATTGCAAATTTTCAATCAGCTAAGTAAGTAAGTCATTAAGCTGAAGCAAGTCAAACCCAGAATAGAAATTCATCAATATGAACACTATGAATCAAAGTACATCATCAAAACCATGATTAAATCAGAAAAACAAATATTTAAAAAAAACTAATAACACTAAAAAGATGGGGATTTGTTATTTGAAGTATACCTTAAAGAGTCCCCCAAAGAAGTTGGTGTCTTAATAAGGGAACAAAGAAGCTTAAGATTGCTAAAAAGTATAAAAACCTTATACACTAAAGACAAACTGATCCCAAGAGATTTTGCAAACAATAAACCAACCCACCCTCAAAATCTCTTTTCAATCGTAAAAACAATGACACACCCAATTAGAATAATATACTCACTACAACCAACAAACTATACATTATAAAAATCAAAACTTTATATTACACATACGAAACAAAACCCTAATCACCAATCATTTCTTACACAAAATTAAATTAAATTCAAGAAACGGAAAATAACTAAAAGAGTGAGAAATTACCTTGAGAAGATCCAAGTCAAGAAGTTTAGCACCAGCTTTTGAATCCCAAACATCTTGTAACTAAATCAAAATCATAAATTAAAATCTAAATTAGAATCATAAATTAGAACCTGGGCATAAATTTAGAAGCAACAATCAATAAAGTAACTAAATCAGAACAAATTCCACCCGAAGCAAACGAAGATTATCGCATGTTCCAGATGAAATCAACATAACGCAAATAATGAAATCAACAAAACGCAAATAAAAATCAGATGAAATAAACAAGCAGAAATCACAAATAATGATCGAAGTAGATTGAATTAGAAATGCAAAATAGAAGAACAAGAATAATAGATTACCATTAGAAAGAGCGAAAATGAAGACGGGAAGACGAGAGAGCTTCGTAAAGTGAAGTTGATGCGGCACTATCGATCCACCGGACACCATTTTTGTGGAAGATGAAAAGCATCGCCAAGTCTATGGAGTATGAATTGCAGGAGAGATGAGGAAAAGGGAAGAGAGCGAATTTCAATGGCGGAAATCGAAGAAGGGAGAGGAGGGAGAAAATGGGGGCGGAAGAGATGGAGTAAGACTGTAAGAGTTAGGGTTTTCCACGGGGTGAAAGGAAAAAGAAAAGGAAAGCACGAAGGAGGGAATCCGAAAATGAAAGCAAGTTTAAGGGCATTTTGGTCAGTGAACTATTGGATGAATAGTGAAAACTAAGTTCTCACTTTTAAAGGTTGTAGGATTTAGTTAAATTTGAGTATCTAGTTAAATTGAGGATTTAGTTGACTTTAGTTAAAATCACATCCGCAACGTAAATTTACAGATTACATCGTATGTAAAACGACCTATATAATGTTAGAATGACTTATGATTTGAAACTAACAAAAGTTGGTTAGTTCCTTATATTTATAATCATGAATCACGAAACATACCAAGTATCTAGCAAGATTTCACAGGATAATGTTATACACAGTAATATACTGCTTATTGCTTCTTATACTGGGGATAAAGAAAAAAAGTCAATGTTGATTAACTTTGACCGTGAAGTCAAAGTGATAGAGTGTCTGTGACTGTTTTTTTTCTGTGGTTAAACTAGGTGCCAATAATGGTGCTATTGCTATTTGACGAGGGATATTAATTCTTAGTTTAAAGTACTTGCATAAATTGATCTTTTTCTTAATGTTGTGTTCCGGGTGAAAATTTATGTTTCCGGGTGAGTATGTGTTTTTGATTTATGAATTTTTTATAATTGGTCTCAAACTCTCAATGTCCTTTTTTGGGGAAGCAAGCAGTTATATCAGCATGCTGATTTTACTAAACCTAAACGTTGTTATTATGTTGACTTCTTTCTTATTATAGGAACATTGTATCAACTGTCAACTTGGACTGCAAGTTGGATCTTAAATCCATTGCGTTGCAAGCTCGTAATGCTGAGTATAATCCAAAGGTTCGATTATTAAGAGTTCATGACTTCATGATGTGCAGTGTTTCTTTTTTACCGATATTTCATAAATTTTCATAAAATTCTCCTTGTTTGTAATTACCTTATTATACTCACTATCGTTTTCTCTTCTGTTGATGTGTAGCGTTTTGCAGCAGTCATTATGAGGATAAGGGAGCCAAAGACAACAGCCCTAGTATTTGCTTCTGGAAAAATGGTGAGCTTGTACCTTAACTCTCTGTATGTTGAAGGGCTTCTTATTTATTAGCTGGATAGTTATATTTCTCGTTAAGGTACTAGTTAGTGTCTTATCAGACTACTACTTTATTGTGTGTTTACTTATACTGCCTGATAACGAAATGGAGTGCTTTTTCACCATGAATGCCAGCTTACATTGGATATACATCTAGTTAACAGTGAACTTAAGAAGTTTAGCAGCGAGTTTGTTTCTAAGAAAGTTATTTATTCGATGCTAAGATAGTAGTATATGTTTATTTTCTGATGATTATCTGGTAATCTAGGTATGCACTGGAGCTAAGAGTGAGAATGATTCAAAATTAGCAGCTCGTAAGGTAAGTCATTATGAAGATGAGATGCTGTTCCTTTTTATGTACTCGGCTTTTGTTTTCCCAATTCCGGGTTACTGTATCTCATGTTGTTTTGTCTTTCAGTATGCTCGAATTATTCAGAAGCTGGGATTCCCTGCCACATTCAAGGTATCTCTTGTTTTCCTTTTCCCTTTTATCTTGCCATTTTATTTATTCCACCATTTTGTTTGAATCTATAAGAAATCTATCCTTTAAAGGAAGCAGGGTTATCCTTGTATGCTACGAGTAGTAAATCTTACGATTTAGTTGGCTTTTGCAGAATTTCAGAATCCAGAATATAGTGGCATCTTGTGATGTGAAATTTCCTATTAGACTGGAGGGGCTTGCATACTCTCATGGTGCCTTTTCTAGTGTGAGTAGTATCATCTCTGTTTGAGCCTGTCACTGTTTTTGTCATAGTTAGTATCAGAACAATGAGCTATCTTTGATGTTATGCATCTATTAGTAATACCTTCGTAAAATGGCCCCAAAAGTATTAACGAAGCCTGGAATTCCATGGAATGTTGTATTAACAATGTCAGGAATTCCGTGAAATGTTTTTGGTTTACAGTATGAACCAGAACTATTTCCTGGGTTGATCTATCGAATGAAACAACCAAAGATTGTGCTGCTTATATTCGTCTCAGGAAAGATAGTTCTGACAGGAGCTAAGGTAAGATTTTATCTTATTTGACGGGATTGATTTCATGTCAAAATCTGAATTTTTGAGATGGATTAGTTTGAAATGATTTGCTTCTTGTCTGGTATTATGCAGGTGAGAGAAGAGACATACACTGCCTTTGAGAACATATATCCAGTGCTTACTGAGTTTAAGAAAAGCCAGCAGTGGTACTGAACACTGAACACTGAACACTGAATATTTTATGTCATGTTCATACTTGAATTTGCTGAATGTTGCTGCTATGAGTGTATCAGTTACATATTTCTCTTCTCTTGAATGTTGTTTGTTTTACAAGGATTTCAATGTGCATAATTTTAATTGAAGTTACTCTTGTATAATGGCAGATTAGTTGAAGTTGCTGACTGCTTAGCATGACAAGCACATTTCGTCAGGCAAGCTGTAAATAGATGCGACATGGAGCACCTAGTTTCTGTTAATTAGAAGATAATGAAGAATGATGATAAGCCACAAAACCATAAAGTGTGAAGTTTTAGCCTGATTGCCTAGTATTACTCTATAGAACATCTGAATTTTGTTTTGAACTTCTTTCTGAATTCTGAATCCTGAATAATAATAATATGGAACTGTTTGGATTAGGGCTCATCATAATCAAACCCGGTACATGTCTCAAATAATCTCATCTTCTTTAATTTTATTTTGGTAATGTGTACACTAATACCCCAACAGTCGAATCCCGAGGTTGCCATTGTTGCCTTCCTAGCTTTGAGATGGATGGAGCTGAAGCACAAAAAAGACGGGTTGAACTTCTGATAGTGTTATTGCTATACGCATATTTGTCTGATATGACCACAACCGAGTATTGAGATGAACATTGGCCAATGTGGTTTTGCTTTTGTCATAATTCAGGGTCGAGATAGGAGGCAATTACCATTGATAATGATATGAAGGAATCCTAATTAGTAAAAGGTAAACACCACGTGAAAAATCCAACATGTGAACGGCCTCTCTCTCTCTTTTTACGTTATCATTGCACGAGGTTGGCTAGGACGCTGGTCACCAGCGACAAATTTAT

mRNA sequence

ACCTCAATCATTCAAATTTCTTTGACCCTTCTTTTTTGCTCTTTCTTTCTCTCTCCTCTTCTGCCTTTTTATCGGCGATTTCCCAGATCTGCGAACTCCACCTGCTCAATTCACGATCAGATCATCTCTGCGACTGTAGAACCAGAGAAGAGAAAGGGGGATTAATATGGAAGAACAGGGCTTGGAAGGTGTTCAACCTGTGGATCAGTCCAAACATCCATCTGGGATCATCCCTACTCTCCAGAACATTGTATCAACTGTCAACTTGGACTGCAAGTTGGATCTTAAATCCATTGCGTTGCAAGCTCGTAATGCTGAGTATAATCCAAAGCGTTTTGCAGCAGTCATTATGAGGATAAGGGAGCCAAAGACAACAGCCCTAGTATTTGCTTCTGGAAAAATGGTATGCACTGGAGCTAAGAGTGAGAATGATTCAAAATTAGCAGCTCGTAAGTATGCTCGAATTATTCAGAAGCTGGGATTCCCTGCCACATTCAAGAATTTCAGAATCCAGAATATAGTGGCATCTTGTGATGTGAAATTTCCTATTAGACTGGAGGGGCTTGCATACTCTCATGGTGCCTTTTCTAGTTATGAACCAGAACTATTTCCTGGGTTGATCTATCGAATGAAACAACCAAAGATTGTGCTGCTTATATTCGTCTCAGGAAAGATAGTTCTGACAGGAGCTAAGGTGAGAGAAGAGACATACACTGCCTTTGAGAACATATATCCAGTGCTTACTGAGTTTAAGAAAAGCCAGCAGTGATTAGTTGAAGTTGCTGACTGCTTAGCATGACAAGCACATTTCGTCAGGCAAGCTGTAAATAGATGCGACATGGAGCACCTAGTTTCTGTTAATTAGAAGATAATGAAGAATGATGATAAGCCACAAAACCATAAAGTGTGAAGTTTTAGCCTGATTGCCTAGTATTACTCTATAGAACATCTGAATTTTGTTTTGAACTTCTTTCTGAATTCTGAATCCTGAATAATAATAATATGGAACTGTTTGGATTAGGGCTCATCATAATCAAACCCGGTACATGTCTCAAATAATCTCATCTTCTTTAATTTTATTTTGGTAATGTGTACACTAATACCCCAACAGTCGAATCCCGAGGTTGCCATTGTTGCCTTCCTAGCTTTGAGATGGATGGAGCTGAAGCACAAAAAAGACGGGTTGAACTTCTGATAGTGTTATTGCTATACGCATATTTGTCTGATATGACCACAACCGAGTATTGAGATGAACATTGGCCAATGTGGTTTTGCTTTTGTCATAATTCAGGGTCGAGATAGGAGGCAATTACCATTGATAATGATATGAAGGAATCCTAATTAGTAAAAGGTAAACACCACGTGAAAAATCCAACATGTGAACGGCCTCTCTCTCTCTTTTTACGTTATCATTGCACGAGGTTGGCTAGGACGCTGGTCACCAGCGACAAATTTAT

Coding sequence (CDS)

ATGGAAGAACAGGGCTTGGAAGGTGTTCAACCTGTGGATCAGTCCAAACATCCATCTGGGATCATCCCTACTCTCCAGAACATTGTATCAACTGTCAACTTGGACTGCAAGTTGGATCTTAAATCCATTGCGTTGCAAGCTCGTAATGCTGAGTATAATCCAAAGCGTTTTGCAGCAGTCATTATGAGGATAAGGGAGCCAAAGACAACAGCCCTAGTATTTGCTTCTGGAAAAATGGTATGCACTGGAGCTAAGAGTGAGAATGATTCAAAATTAGCAGCTCGTAAGTATGCTCGAATTATTCAGAAGCTGGGATTCCCTGCCACATTCAAGAATTTCAGAATCCAGAATATAGTGGCATCTTGTGATGTGAAATTTCCTATTAGACTGGAGGGGCTTGCATACTCTCATGGTGCCTTTTCTAGTTATGAACCAGAACTATTTCCTGGGTTGATCTATCGAATGAAACAACCAAAGATTGTGCTGCTTATATTCGTCTCAGGAAAGATAGTTCTGACAGGAGCTAAGGTGAGAGAAGAGACATACACTGCCTTTGAGAACATATATCCAGTGCTTACTGAGTTTAAGAAAAGCCAGCAGTGA

Protein sequence

MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAVIMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVASCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFKKSQQ

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo01030	Spo01030	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo01030.1	Spo01030.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01030.1.utr5p.2	Spo01030.1.utr5p.2	five_prime_UTR
Spo01030.1.utr5p.1	Spo01030.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01030.1.CDS.9	Spo01030.1.CDS.9	CDS
Spo01030.1.CDS.8	Spo01030.1.CDS.8	CDS
Spo01030.1.CDS.7	Spo01030.1.CDS.7	CDS
Spo01030.1.CDS.6	Spo01030.1.CDS.6	CDS
Spo01030.1.CDS.5	Spo01030.1.CDS.5	CDS
Spo01030.1.CDS.4	Spo01030.1.CDS.4	CDS
Spo01030.1.CDS.3	Spo01030.1.CDS.3	CDS
Spo01030.1.CDS.2	Spo01030.1.CDS.2	CDS
Spo01030.1.CDS.1	Spo01030.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01030.1.utr3p.1	Spo01030.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo01030.1.exon.10	Spo01030.1.exon.10	exon
Spo01030.1.exon.9	Spo01030.1.exon.9	exon
Spo01030.1.exon.8	Spo01030.1.exon.8	exon
Spo01030.1.exon.7	Spo01030.1.exon.7	exon
Spo01030.1.exon.6	Spo01030.1.exon.6	exon
Spo01030.1.exon.5	Spo01030.1.exon.5	exon
Spo01030.1.exon.4	Spo01030.1.exon.4	exon
Spo01030.1.exon.3	Spo01030.1.exon.3	exon
Spo01030.1.exon.2	Spo01030.1.exon.2	exon
Spo01030.1.exon.1	Spo01030.1.exon.1	exon

Homology

[Close]

BLAST of Spo01030.1 vs. NCBI nr
Match: gi|731358886|ref|XP_010690990.1| (PREDICTED: TATA-box-binding protein 2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 374.4 bits (960), Expect = 1.200e-100
Identity = 188/200 (94.00%), Postives = 194/200 (97.00%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M EQGLEG QPVD SKHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MAEQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIREPKTTAL+FASGKMVCTGAKSEN SKLAARKYARIIQKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSENQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVLTEF+KSQQ
Sbjct: 181 TYTAFENIYPVLTEFRKSQQ 200

[Close]

BLAST of Spo01030.1 vs. NCBI nr
Match: gi|1013854180|gb|AMT91857.1| (TATA-box-binding protein [Apium graveolens])

HSP 1 Score: 370.2 bits (949), Expect = 2.300e-99
Identity = 185/200 (92.50%), Postives = 193/200 (96.50%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M EQGLEG QPVD SKHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MAEQGLEGSQPVDYSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIR+PKTTAL+FASGKMVCTGAKSE  SKLAARKYARIIQKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVLTEF+K+QQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Spo01030.1 vs. NCBI nr
Match: gi|1351224|sp|P48511.1|TBP_MESCR (RecName: Full=TATA-box-binding protein; AltName: Full=TATA sequence-binding protein; Short=TBP; AltName: Full=TATA-binding factor; AltName: Full=TATA-box factor; AltName: Full=Transcription initiation factor TFIID TBP subunit)

HSP 1 Score: 369.0 bits (946), Expect = 5.200e-99
Identity = 185/200 (92.50%), Postives = 192/200 (96.00%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M EQGLEG QPVD  KHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MAEQGLEGSQPVDPIKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIREPKTTAL+FASGKMVCTGAKSE  SKLAARKYARIIQKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVLTEF+K+QQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Spo01030.1 vs. NCBI nr
Match: gi|449452638|ref|XP_004144066.1| (PREDICTED: TATA-box-binding protein [Cucumis sativus])

HSP 1 Score: 369.0 bits (946), Expect = 5.200e-99
Identity = 184/200 (92.00%), Postives = 192/200 (96.00%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M +QGLEG QPVD  KHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIREPKTTAL+FASGKMVCTGAKSE  SKLAARKYARIIQKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVLTEF+K+QQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Spo01030.1 vs. NCBI nr
Match: gi|695001989|ref|XP_009419235.1| (PREDICTED: TATA-box-binding protein-like isoform X1 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 368.6 bits (945), Expect = 6.800e-99
Identity = 184/200 (92.00%), Postives = 193/200 (96.50%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M +QGLEG QPVD SKHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIREPKTTAL+FASGKMVCTGAKSE+ SKLAARKYARIIQKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEHQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAF SYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFCSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVREE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVLTEF+KSQQ
Sbjct: 181 TYTAFENIYPVLTEFRKSQQ 200

[Close]

BLAST of Spo01030.1 vs. UniProtKB/TrEMBL
Match: A0A142NJ41_APIGR (TATA-box-binding protein OS=Apium graveolens PE=2 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 1.600e-99
Identity = 185/200 (92.50%), Postives = 193/200 (96.50%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M EQGLEG QPVD SKHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MAEQGLEGSQPVDYSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIR+PKTTAL+FASGKMVCTGAKSE  SKLAARKYARIIQKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVLTEF+K+QQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Spo01030.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LWT4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599390 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 3.600e-99
Identity = 184/200 (92.00%), Postives = 192/200 (96.00%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M +QGLEG QPVD  KHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGAQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIREPKTTAL+FASGKMVCTGAKSE  SKLAARKYARIIQKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVLTEF+K+QQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Spo01030.1 vs. UniProtKB/TrEMBL
Match: M0S3E0_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 4.700e-99
Identity = 184/200 (92.00%), Postives = 193/200 (96.50%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M +QGLEG QPVD SKHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIREPKTTAL+FASGKMVCTGAKSE+ SKLAARKYARIIQKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEHQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAF SYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFCSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVREE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVLTEF+KSQQ
Sbjct: 181 TYTAFENIYPVLTEFRKSQQ 200

[Close]

BLAST of Spo01030.1 vs. UniProtKB/TrEMBL
Match: Q9ZTX5_PHAVU (TATA-box binding protein OS=Phaseolus vulgaris GN=PVTBP1 PE=2 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 8.100e-99
Identity = 182/200 (91.00%), Postives = 193/200 (96.50%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M +QGLEG+QPVD  +HPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGIQPVDLQRHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIREPKTTAL+FASGKMVCTGAKSE  SKLAARKYARIIQKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVLTEF+K+QQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Spo01030.1 vs. UniProtKB/TrEMBL
Match: C5WQG2_SORBI (Putative uncharacterized protein Sb01g012880 OS=Sorghum bicolor GN=Sb01g012880 PE=3 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.100e-98
Identity = 185/200 (92.50%), Postives = 191/200 (95.50%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M E GLEG QPVD SKHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MAEPGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIREPKTTAL+FASGKMVCTGAKSE  SKLAARKYARIIQKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVLTEF+K QQ
Sbjct: 181 TYTAFENIYPVLTEFRKVQQ 200

[Close]

BLAST of Spo01030.1 vs. ExPASy Swiss-Prot
Match: TBP_MESCR (TATA-box-binding protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 3.300e-101
Identity = 185/200 (92.50%), Postives = 192/200 (96.00%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M EQGLEG QPVD  KHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MAEQGLEGSQPVDPIKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIREPKTTAL+FASGKMVCTGAKSE  SKLAARKYARIIQKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVLTEF+K+QQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Spo01030.1 vs. ExPASy Swiss-Prot
Match: TBP2_MAIZE (TATA-box-binding protein 2 OS=Zea mays GN=TBP2 PE=2 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 2.800e-100
Identity = 184/200 (92.00%), Postives = 191/200 (95.50%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M E GLEG QPVD SKHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MAEPGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIREPKTTAL+FASGKMVCTGAKSE  SKLAARKYARIIQKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVL+EF+K QQ
Sbjct: 181 TYTAFENIYPVLSEFRKIQQ 200

[Close]

BLAST of Spo01030.1 vs. ExPASy Swiss-Prot
Match: TBP_SOYBN (TATA-box-binding protein OS=Glycine max GN=TBP1 PE=2 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 2.800e-100
Identity = 182/200 (91.00%), Postives = 192/200 (96.00%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M +QGLEG QPVD  KHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIR+PKTTAL+FASGKMVCTGAKSE  SKLAARKYARIIQKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVLTEF+K+QQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Spo01030.1 vs. ExPASy Swiss-Prot
Match: TBP_SOLTU (TATA-box-binding protein OS=Solanum tuberosum GN=TBP PE=2 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 3.600e-100
Identity = 181/200 (90.50%), Postives = 193/200 (96.50%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M +QGLEG QPVD +KHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGLEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIREPKTTAL+FASGKMVCTGAKSE  SKLAARKYARIIQKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAY+HGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIV+TGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVITGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVLTEF+K+QQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Spo01030.1 vs. ExPASy Swiss-Prot
Match: TBP_TOBAC (TATA-box-binding protein OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 1.400e-99
Identity = 183/200 (91.50%), Postives = 191/200 (95.50%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M E GLEG QPVD SKHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MAEVGLEGNQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIREPKTTAL+FASGKMVCTGAKSE  SKLAARKYARIIQKLGF A FK+F+IQNIV 
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEQSSKLAARKYARIIQKLGFDAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVR+E
Sbjct: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVLTEF+K+QQ
Sbjct: 181 TYTAFENIYPVLTEFRKNQQ 200

[Close]

BLAST of Spo01030.1 vs. TAIR (Arabidopsis)
Match: AT1G55520.1 (TATA binding protein 2)

HSP 1 Score: 354.8 bits (909), Expect = 3.600e-98
Identity = 177/200 (88.50%), Postives = 189/200 (94.50%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M +QG EG QPVD +KHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MADQGTEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIREPKTTAL+FASGKMVCTGAKSE+ SKLAARKYARI+QKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEHLSKLAARKYARIVQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAK+REE
Sbjct: 121 SCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMKLPKIVLLIFVSGKIVITGAKMREE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TYTAFENIYPVL EF+K QQ
Sbjct: 181 TYTAFENIYPVLREFRKVQQ 200

[Close]

BLAST of Spo01030.1 vs. TAIR (Arabidopsis)
Match: AT3G13445.1 (TATA binding protein 1)

HSP 1 Score: 352.8 bits (904), Expect = 1.400e-97
Identity = 175/200 (87.50%), Postives = 189/200 (94.50%), Query Frame = 1


		  
Query: 1   MEEQGLEGVQPVDQSKHPSGIIPTLQNIVSTVNLDCKLDLKSIALQARNAEYNPKRFAAV 60
           M +QGLEG  PVD SKHPSGI+PTLQNIVSTVNLDCKLDLK+IALQARNAEYNPKRFAAV
Sbjct: 1   MTDQGLEGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV 60

Query: 61  IMRIREPKTTALVFASGKMVCTGAKSENDSKLAARKYARIIQKLGFPATFKNFRIQNIVA 120
           IMRIREPKTTAL+FASGKMVCTGAKSE+ SK+AARKYARI+QKLGFPA FK+F+IQNIV 
Sbjct: 61  IMRIREPKTTALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVG 120

Query: 121 SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE 180
           SCDVKFPIRLEGLAYSH AFSSYEPELFPGLIYRMK PKIVLLIFVSGKIV+TGAK+R+E
Sbjct: 121 SCDVKFPIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDE 180

Query: 181 TYTAFENIYPVLTEFKKSQQ 201
           TY AFENIYPVL+EF+K QQ
Sbjct: 181 TYKAFENIYPVLSEFRKIQQ 200

The following BLAST results are available for this feature:

BLAST of Spo01030.1 vs. NCBI nr
BLAST of Spo01030.1 vs. UniProtKB/TrEMBL
BLAST of Spo01030.1 vs. ExPASy Swiss-Prot
BLAST of Spo01030.1 vs. TAIR (Arabidopsis)

BLAST of Spo01030.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|731358886\|ref\|XP_010690990.1\|	1.2e-100	94.0	PREDICTED: TATA-box-binding pr...	[more]
gi\|1013854180\|gb\|AMT91857.1\|	2.3e-99	92.5	TATA-box-binding protein [Apiu...	[more]
gi\|1351224\|sp\|P48511.1\|TBP_MESCR	5.2e-99	92.5	RecName: Full=TATA-box-binding...	[more]
gi\|449452638\|ref\|XP_004144066.1\|	5.2e-99	92.0	PREDICTED: TATA-box-binding pr...	[more]
gi\|695001989\|ref\|XP_009419235.1\|	6.8e-99	92.0	PREDICTED: TATA-box-binding pr...	[more]

BLAST of Spo01030.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A142NJ41_APIGR	1.6e-99	92.5	TATA-box-binding protein OS=Ap...	[more]
A0A0A0LWT4_CUCSA	3.6e-99	92.0	Uncharacterized protein OS=Cuc...	[more]
M0S3E0_MUSAM	4.7e-99	92.0	Uncharacterized protein OS=Mus...	[more]
Q9ZTX5_PHAVU	8.1e-99	91.0	TATA-box binding protein OS=Ph...	[more]
C5WQG2_SORBI	1.1e-98	92.5	Putative uncharacterized prote...	[more]

BLAST of Spo01030.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
TBP_MESCR	3.3e-101	92.5	TATA-box-binding protein OS=Me...	[more]
TBP2_MAIZE	2.8e-100	92.0	TATA-box-binding protein 2 OS=...	[more]
TBP_SOYBN	2.8e-100	91.0	TATA-box-binding protein OS=Gl...	[more]
TBP_SOLTU	3.6e-100	90.5	TATA-box-binding protein OS=So...	[more]
TBP_TOBAC	1.4e-99	91.5	TATA-box-binding protein OS=Ni...	[more]

BLAST of Spo01030.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G55520.1	3.6e-98	88.5	TATA binding protein 2	[more]
AT3G13445.1	1.4e-97	87.5	TATA binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000814	TATA-box binding protein	PRINTS	PR00686	TIFACTORIID	coord: 68..86 score: 4.9E-68coord: 139..154 score: 4.9E-68coord: 158..174 score: 4.9E-68coord: 25..40 score: 4.9E-68coord: 49..68 score: 4.9E-68coord: 115..131 score: 4.9
IPR000814	TATA-box binding protein	HAMAP	MF_00408	TATA_bind_prot_arch	coord: 19..198 score: 28
IPR000814	TATA-box binding protein	PANTHER	PTHR10126	TATA-BOX BINDING PROTEIN	coord: 1..197 score: 9.7E
IPR000814	TATA-box binding protein	PFAM	PF00352	TBP	coord: 112..194 score: 4.0E-33coord: 24..103 score: 7.2
IPR012295	Beta2-adaptin/TBP, C-terminal domain	GENE3D	3.30.310.10		coord: 22..105 score: 2.7E-40coord: 107..196 score: 2.0
None	No IPR available	PANTHER	PTHR10126:SF23	SUBFAMILY NOT NAMED	coord: 1..197 score: 9.7E
None	No IPR available	unknown	SSF55945	TATA-box binding protein-like	coord: 22..114 score: 1.88E-33coord: 112..197 score: 3.45

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding