Spo00514.1 (mRNA)

Overview
NameSpo00514.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionDefensin-1 (Precursor)
LocationSpoScf_02455 : 35023 .. 39441 (-)
Sequence length854
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTTTGAAACATCTCTTCTGACCTACGACGGAGTATCAGCTATATATACATCTATATCATCATATACTAGCTTCAAACAACTCAAACATTTTCCTTTTAAAAAAAAAAACTCATAAACAACATTAAGAAAATGGAGAAGAAATTCTTTGGGCTTTTGCTTTTGCTTCTCTTCTTCTTTGCTTCTGGTAATCAACTACTCACTTTCTCGTGTATATATAATTATATACGTAGTATTCCGTTTTTTAATACTCGTAAAGTTTGGACCTTTTTACACTATTCACATATTCTATTTTGATTTTTGCTGGTGATTTACATGTAAGATAAAACATAGTTCGATTATGTGGTATTTTGTTAGATTCGTCTAAAGGTTTATTTTCCAAATATCAATTTTTCATAATTTTTTATTAAAGAGAACTAAAGATACTTATTAATGATCAATGTTGTGCATTAGCATGCGTGAAAGTGACCAACGCTGTGAATAAAAACAAAAGGAGAAAATATGTACGTATTTACGTAGTGGTCATTTTATTGATATGGGTTTTTGTGAATTTCTCCATGGAATATATTGTCATGAATTTATCTCTTTTTCTACTCCGTATATACGTAATATAAGACTAACTTATTAGCAAACTTAATTATCTCCCGTGCATGCAAGGACATTCAAAATTATTATTTTACCATCTTTCTACAAAATATTTAATTGAAATATTTATCCCTTAAAGCTAATGCATAATTAATAAATCTTGAATGTACGTACTCATTTGTAATGACATGTGCACGATAGGTTTCAGGTTCGAATCTCCACCACCATTTGCTATATGCATTGCTATATGGCTCATTCACCAAAAAAAAAAAATTTGAAAGTGTAACAAGTTCAAATATAGAAAGTTATATTTGAATATTTACCATCATACTATTAGGATCTAGCTACTTTTATGTGTGTTTTATTTTGATGGACAAAATTAGTACGTTACGTAGTAGTAGTTCTTACGAAGTAATCTCAATTTGATCGAGTTGCTAATCCCTTAAAATTAATATGTGTTTTGTTGTATACGACAGAGATGAACATGGTAGCTGAGGTTGAGGGTTTCACATGCTCAAAACCAAGCAAATACTTCAGAGGCTTTTGTAATAATTCTTGCAAGGACGCTTGTAACGATGAGAATTGGCCTATTGGAAACTGTGTAGGCTTTCTCGGAAATAAATGTGAATGCCGTAAACCGTCCCCTTGTTAAGCAGTGTGCTGATGCTCATCTATCGGGTATGAGTAAGAATGCATTCTATTCACCTAATTTTCACTTATTTTTTCTGAATTTATCTTATCTGAACTTATCAAAACTTATCATAAAAGAAAATTAACCTAAATTTACACTACTACTCATGTAGTCATGTTATTGAGCTCTATCTCATTTATGTTTATTTTCATCCTCCTTTTCAGGTACTGCTGGCCAGGGATAATAAGATGCTGATGTCATAAATCAATAATATAAAATCTTGTAATGTAGAAGAAATGGGTGTCTGCTGATCAACTGCTACACCGGTTTATAAGTAATCCGTATATGGATTGAACTGCCGCGTGCGTAGCACACGTCAGTCAACATGGTATTTTAATATTTCTCCAGTTCGTTTTTTATTCTCTACGTGTTCTGTTTTATGTGTTCTATTTTAATATTTATGTTTGGAATATTTGCTTTTATATTGTAACATAAGTGTTCTTAATATTTTGTCAAAAATTGTAACAAGTGATTATTTTCATCGCTTACATTTTTGAGCATTAAATCTCTCACACTTTTTCAATGTCGGATTTTAAATAAAAGTGAAAATATTATAAATAAATATAATTTGCATTGTTTAAATAAAAAAGATGGAATCTCAATCCACATTAATTAGTAGTTAAATTGCGTGCATAATACCAAACACGTAAATAAAAAAGGGACGTAGTGAGTATTATCTTTGTGGTTAACCCAACGTTAATGAGCAAAAATCTTGACTTAAAAAGAAAAATAACGATACTTGTTAATATTGGATCGACAACAAAGATAAAGTTGATTGATTTGTGCAACTACGACTCTATGAGGGTACAATGTATAAATGTAAAGCGCTTGAAAACGTATTACGTAGAAATCAATAAAATACAATGGTATAATGTAAAAAAAACCAAACTTGCCTTTACTAAACTTAACCTTTTTCTGAATATTATTTTTTAAAGGCGAAAAGAACAGAATATCGGTTTAGGTTCAATTCGATAAGAAAATTAAGTTATCGAAAACTATTACGAGTATCAATTGAAAAGTAAGGGGAACTTAATATGAGATGATAATCCTTTTCTTTGGAACTTAATATGAGATGATAATTTTTTTTTCGGCTCGTTTGGTAGCGTGTGATAAATGTTGGAATGAGAAAAGTGTTATGGCAAAACCATAACATCATGATGTTTATAGTAATGAAAATTTGTCTCAAACTTCGAAGTTTTTTTCATAAATTTGCACTACCACCTAATACCACTCCCGAAATGAGAATAGAATTTTATAAAGAAAAAGAGATAATTTTGAGTGAACTAGTATTACCATTGGAATAAATATTTATTTTCCTTACAAATTACATATAAATTCATTACCATTGATGCCTTTTTTATGGCCGACTAGCAAACGGACCGTTAATAAATCAGATTGGATCTAAATTAAACAGCCTCGTTCCTGACTTTTGGGGGGGCCTAGGCGAAAAAAGGGATTATGGACTCTTTGAAAAATAAGACGCATAAAATTTTCGTCCAATCCGCTACATATTCAAATTCAAATCAATAAAATTATTTTATCTCCTTCAAAAATTTCACCGGCCTACTCTAAGCACTTGCAAATTATTAGTTAAATATATAATCACTTAATTACGGTATTATGTAGTCAATCATATGAATAAATAGGTTTATTATTTTATCCAAAAAATAAGATTTATTTTAGTATCAGTATCTTTATATTAGTAGTCCCTTACTCTTGTTTTCATTAAAGTTTGAAATTTGATTTTACAGTACTATCTAATATAGTCCATCATACAGGTAAATTCACCCACAAATATTACACTACAACTGAGTATTAAAAGACAAACTAGATGTCAAGCACTACATACCTAAATAAAAATTAACATACACAAAATATATGAATGAGAAAATCAATGCCTCAAAAATAAAAGTGTTTCAGTGAATTTTTTTTTTTTTTAAAAAAAAAACCTAGCTAATTAATGTGTAAAACGAAAATAAAATGAGAAAAGCACGGGATGGGAAGTTGTTAAGAGCAAAAATAATAAATTAATGCAGTTGGGTAGAATCGAACTCGCGTCCCCCTGTCAAATAAAAAAATACAAACTTTTATACAAGGCGGACTTACACAAAAATCACATTGGTGTCATATAAGTTAAGCGGTGGAACCAATTAGTTAAGCAATGAAATCAACTAGTTTTGAGCCCGTGCGATGCACGGAACGCTCTATTATTTCACAGTTTGAATAACAACCATTATAAAAGTTTCTTTTGCTAACTATTTAAGTTCGTAGTATTGTTGTACAGAGTATCATTTGAATGTTTAATGTTTCAAAATGTATCATTAAAACAACTATAATTTACAATTTAAAATAATATGTGTAAAGAAATTTTGAATAAATAAAGTCACTGAGAATTGTTTGTTCTAGTTTTTTTTTTTTTTTTAAATTTTATTGAACAATAACGTAGTATTTATATAGAAGTCTGATTATATCTAATAGTTACATAGAAGTTAAATTCTTTGTACAACACATTATGAAAGTGTTAGCATTACATTCTTTAATAAATATACCAAACATAATACATAATAGATAAAATCAAACAAAATAGGTACAATCTAACATTATTAATTTTTTAGTTTCAATATGTTTAGTACACCTGATATAAGTAACAAACATTTTATCCTCCGGTTGTTGATGTCCAGCATTCCACACCATGACTCTATTCCCTTGCTACGTTGTCTATCTTTTTCATCTTATTCTTTTTCCTCTGATCTGCAAAAGAATGACATTAATTTTTCTATTTATACACATATTTTTTTTTTGTGGTAATTTAAAGGTTACTTTTCTTGTTTTATCTTCTTAGGTGCTTGGTGTGTGTTAAAGACTAAAAACACGAAGAAGGAAACGGTTTTGTGCCTGGAGTTGCACCACTAATAATTTAATTAATGAAGAGAAGTCACATACAAAGTACCCTGCTTATGTTGCAAAGTAATGTAGCAATTACATGCTAGTTATGAGAATTACACAAATCAAATTCCCGCAAACTTCAATAGTAGTTTACATAGAAACTATGTAAATTAATTTTGAAAAGAAATATATGATAATACATAAATTTACATGATACTTAGTGAGCCTAAGTACCATGATAAACCAAACAGATATGAAG

mRNA sequence

CGTTTGAAACATCTCTTCTGACCTACGACGGAGTATCAGCTATATATACATCTATATCATCATATACTAGCTTCAAACAACTCAAACATTTTCCTTTTAAAAAAAAAAACTCATAAACAACATTAAGAAAATGGAGAAGAAATTCTTTGGGCTTTTGCTTTTGCTTCTCTTCTTCTTTGCTTCTGAGATGAACATGGTAGCTGAGGTTGAGGGTTTCACATGCTCAAAACCAAGCAAATACTTCAGAGGCTTTTGTAATAATTCTTGCAAGGACGCTTGTAACGATGAGAATTGGCCTATTGGAAACTGTGTAGGCTTTCTCGGAAATAAATGTGAATGCCGTAAACCGTCCCCTTGTTAAGCAGTGTGCTGATGCTCATCTATCGGGTACTGCTGGCCAGGGATAATAAGATGCTGATGTCATAAATCAATAATATAAAATCTTGTAATGTAGAAGAAATGGGTGTCTGCTGATCAACTGCTACACCGGTTTATAAGTAATCCGTATATGGATTGAACTGCCGCGTGCGTAGCACACGTCAGTCAACATGGTGCTTGGTGTGTGTTAAAGACTAAAAACACGAAGAAGGAAACGGTTTTGTGCCTGGAGTTGCACCACTAATAATTTAATTAATGAAGAGAAGTCACATACAAAGTACCCTGCTTATGTTGCAAAGTAATGTAGCAATTACATGCTAGTTATGAGAATTACACAAATCAAATTCCCGCAAACTTCAATAGTAGTTTACATAGAAACTATGTAAATTAATTTTGAAAAGAAATATATGATAATACATAAATTTACATGATACTTAGTGAGCCTAAGTACCATGATAAACCAAACAGATATGAAG

Coding sequence (CDS)

ATGGAGAAGAAATTCTTTGGGCTTTTGCTTTTGCTTCTCTTCTTCTTTGCTTCTGAGATGAACATGGTAGCTGAGGTTGAGGGTTTCACATGCTCAAAACCAAGCAAATACTTCAGAGGCTTTTGTAATAATTCTTGCAAGGACGCTTGTAACGATGAGAATTGGCCTATTGGAAACTGTGTAGGCTTTCTCGGAAATAAATGTGAATGCCGTAAACCGTCCCCTTGTTAA

Protein sequence

MEKKFFGLLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFCNNSCKDACNDENWPIGNCVGFLGNKCECRKPSPC
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo00514Spo00514gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo00514.1Spo00514.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo00514.1.utr5p.1Spo00514.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo00514.1.CDS.2Spo00514.1.CDS.2CDS
Spo00514.1.CDS.1Spo00514.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo00514.1.utr3p.3Spo00514.1.utr3p.3three_prime_UTR
Spo00514.1.utr3p.2Spo00514.1.utr3p.2three_prime_UTR
Spo00514.1.utr3p.1Spo00514.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo00514.1.exon.4Spo00514.1.exon.4exon
Spo00514.1.exon.3Spo00514.1.exon.3exon
Spo00514.1.exon.2Spo00514.1.exon.2exon
Spo00514.1.exon.1Spo00514.1.exon.1exon


Homology
[Close]
BLAST of Spo00514.1 vs. NCBI nr
Match: gi|902192830|gb|KNA12122.1| (hypothetical protein SOVF_128740 [Spinacia oleracea])

HSP 1 Score: 169.5 bits (428), Expect = 2.300e-39
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 

		  

Query: 1  MEKKFFGLLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFCNNSCKDACNDENWPIGNC 60
          MEKKFFGLLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFCNNSCKDACNDENWPIGNC
Sbjct: 1  MEKKFFGLLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFCNNSCKDACNDENWPIGNC 60

Query: 61 VGFLGNKCECRKPSPC 77
          VGFLGNKCECRKPSPC
Sbjct: 61 VGFLGNKCECRKPSPC 76
[Close]
BLAST of Spo00514.1 vs. NCBI nr
Match: gi|731343266|ref|XP_010682809.1| (PREDICTED: defensin-like protein AX1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 105.1 bits (261), Expect = 5.300e-20
Identity = 51/77 (66.23%), Postives = 60/77 (77.92%), Query Frame = 1 

		  

Query: 1  MEKKFFGLLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFC-----NNSCKDACNDENW 60
          MEKKFFGLLLLLLF FASEMNMV EV+G TC+KPSK+F+G C     +++CK ACN ENW
Sbjct: 1  MEKKFFGLLLLLLFLFASEMNMVVEVDGATCAKPSKFFKGGCFSVISDSACKKACNQENW 60

Query: 61 PIGNCVGFLGNKCECRK 73
          PIG CV     +CECR+
Sbjct: 61 PIGICVPVF--RCECRR 75
[Close]
BLAST of Spo00514.1 vs. NCBI nr
Match: gi|731343268|ref|XP_010682810.1| (PREDICTED: defensin-like protein AX1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 105.1 bits (261), Expect = 5.300e-20
Identity = 51/77 (66.23%), Postives = 60/77 (77.92%), Query Frame = 1 

		  

Query: 1  MEKKFFGLLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFC-----NNSCKDACNDENW 60
          MEKKFFGLLLLLLF FASEMNMV EV+G TC+KPSK+F+G C     +++CK ACN ENW
Sbjct: 1  MEKKFFGLLLLLLFLFASEMNMVVEVDGATCAKPSKFFKGGCFSVISDSTCKKACNQENW 60

Query: 61 PIGNCVGFLGNKCECRK 73
          PIG CV     +CECR+
Sbjct: 61 PIGICVPVF--RCECRR 75
[Close]
BLAST of Spo00514.1 vs. NCBI nr
Match: gi|731343264|ref|XP_010682808.1| (PREDICTED: defensin-like protein AX1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 102.1 bits (253), Expect = 4.500e-19
Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 1 

		  

Query: 1  MEKKFFGLLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFC-----NNSCKDACNDENW 60
          MEKKFFGLLLLLLF FAS+MNMV EV+G TC+KPSK+F+G C     +++CK AC+ ENW
Sbjct: 1  MEKKFFGLLLLLLFLFASDMNMVVEVDGATCAKPSKFFKGGCFSVISDSACKKACSQENW 60

Query: 61 PIGNCVGFLGNKCECRK 73
          PIG CV     +CECR+
Sbjct: 61 PIGICVPVF--RCECRR 75
[Close]
BLAST of Spo00514.1 vs. NCBI nr
Match: gi|870847436|gb|KMS99801.1| (hypothetical protein BVRB_1g020540 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 101.3 bits (251), Expect = 7.700e-19
Identity = 49/75 (65.33%), Postives = 59/75 (78.67%), Query Frame = 1 

		  

Query: 1  MEKKFFGLLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFC--NNSCKDACNDENWPIG 60
          MEKKFFGLLLLLLF FASE+NMVAEV+G TC KPS YF G C  + +C+ ACN E+WP G
Sbjct: 1  MEKKFFGLLLLLLFVFASELNMVAEVQGATCRKPSMYFSGACFSDTNCQKACNREDWPNG 60

Query: 61 NCVGFLGNKCECRKP 74
           C+  +G KCEC++P
Sbjct: 61 KCL--VGFKCECQRP 73
[Close]
BLAST of Spo00514.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXZ2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_128740 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.600e-39
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 

		  

Query: 1  MEKKFFGLLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFCNNSCKDACNDENWPIGNC 60
          MEKKFFGLLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFCNNSCKDACNDENWPIGNC
Sbjct: 1  MEKKFFGLLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFCNNSCKDACNDENWPIGNC 60

Query: 61 VGFLGNKCECRKPSPC 77
          VGFLGNKCECRKPSPC
Sbjct: 61 VGFLGNKCECRKPSPC 76
[Close]
BLAST of Spo00514.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C148_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g151070 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 3.700e-20
Identity = 51/77 (66.23%), Postives = 60/77 (77.92%), Query Frame = 1 

		  

Query: 1  MEKKFFGLLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFC-----NNSCKDACNDENW 60
          MEKKFFGLLLLLLF FASEMNMV EV+G TC+KPSK+F+G C     +++CK ACN ENW
Sbjct: 1  MEKKFFGLLLLLLFLFASEMNMVVEVDGATCAKPSKFFKGGCFSVISDSACKKACNQENW 60

Query: 61 PIGNCVGFLGNKCECRK 73
          PIG CV     +CECR+
Sbjct: 61 PIGICVPVF--RCECRR 75
[Close]
BLAST of Spo00514.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C614_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g151050 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.100e-19
Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 1 

		  

Query: 1  MEKKFFGLLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFC-----NNSCKDACNDENW 60
          MEKKFFGLLLLLLF FAS+MNMV EV+G TC+KPSK+F+G C     +++CK AC+ ENW
Sbjct: 1  MEKKFFGLLLLLLFLFASDMNMVVEVDGATCAKPSKFFKGGCFSVISDSACKKACSQENW 60

Query: 61 PIGNCVGFLGNKCECRK 73
          PIG CV     +CECR+
Sbjct: 61 PIGICVPVF--RCECRR 75
[Close]
BLAST of Spo00514.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BFR3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g020540 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.400e-19
Identity = 49/75 (65.33%), Postives = 59/75 (78.67%), Query Frame = 1 

		  

Query: 1  MEKKFFGLLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFC--NNSCKDACNDENWPIG 60
          MEKKFFGLLLLLLF FASE+NMVAEV+G TC KPS YF G C  + +C+ ACN E+WP G
Sbjct: 1  MEKKFFGLLLLLLFVFASELNMVAEVQGATCRKPSMYFSGACFSDTNCQKACNREDWPNG 60

Query: 61 NCVGFLGNKCECRKP 74
           C+  +G KCEC++P
Sbjct: 61 KCL--VGFKCECQRP 73
[Close]
BLAST of Spo00514.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CSY8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g043600 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.500e-18
Identity = 48/78 (61.54%), Postives = 56/78 (71.79%), Query Frame = 1 

		  

Query: 1  MEKKFFGLLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFCNNS-----CKDACNDENW 60
          MEKKFFGL LLLLF FASEMNM+ EV+G  C+KPSKY+RG C NS     C   C+ ENW
Sbjct: 1  MEKKFFGLCLLLLFLFASEMNMMVEVDGANCAKPSKYYRGPCFNSISIKACTQRCSQENW 60

Query: 61 PIGNCVGFLGNKCECRKP 74
          PIG C G    +CEC++P
Sbjct: 61 PIGLCNGL---RCECQRP 75
[Close]
BLAST of Spo00514.1 vs. ExPASy Swiss-Prot
Match: DFAX2_BETVU (Defensin-like protein AX2 OS=Beta vulgaris PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.800e-7
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 1 

		  

Query: 30 TCSKPSKYFRGFC--NNSCKDACNDENWPIGNCVGFLGNKCECRKP 74
          TC KPS YF G C  + +C+ ACN E+WP G C+  +G KCEC++P
Sbjct: 2  TCRKPSMYFSGACFSDTNCQKACNREDWPNGKCL--VGFKCECQRP 45
[Close]
BLAST of Spo00514.1 vs. ExPASy Swiss-Prot
Match: DEF09_ARATH (Putative defensin-like protein 9 OS=Arabidopsis thaliana GN=LCR76 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.300e-7
Identity = 29/68 (42.65%), Postives = 34/68 (50.00%), Query Frame = 1 

		  

Query: 8  LLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFCNN--SCKDACNDENWPIGNCVGFLG 67
          L  L++   A  M MV E +   C   S  +RG C    SCK  C  E +P G C GF  
Sbjct: 11 LFFLVILVVAPGMKMVVEGQPQLCETKSLNYRGLCLKWRSCKRVCISEGFPDGRCKGFFN 70

Query: 68 NKCECRKP 74
          NKC CRKP
Sbjct: 71 NKCVCRKP 78
[Close]
BLAST of Spo00514.1 vs. ExPASy Swiss-Prot
Match: DFAX1_BETVU (Defensin-like protein AX1 OS=Beta vulgaris PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 8.800e-7
Identity = 23/44 (52.27%), Postives = 30/44 (68.18%), Query Frame = 1 

		  

Query: 31 CSKPSKYFRGFCNNS--CKDACNDENWPIGNCVGFLGNKCECRK 73
          C KPSK+F+G C     C+ AC+ ENWP G CV FL  +CEC++
Sbjct: 3  CKKPSKFFKGACGRDADCEKACDQENWPGGVCVPFL--RCECQR 44
[Close]
BLAST of Spo00514.1 vs. TAIR (Arabidopsis)
Match: AT2G31953.1 (low-molecular-weight cysteine-rich 76)

HSP 1 Score: 55.8 bits (133), Expect = 1.300e-8
Identity = 29/68 (42.65%), Postives = 34/68 (50.00%), Query Frame = 1 

		  

Query: 8  LLLLLLFFFASEMNMVAEVEGFTCSKPSKYFRGFCNN--SCKDACNDENWPIGNCVGFLG 67
          L  L++   A  M MV E +   C   S  +RG C    SCK  C  E +P G C GF  
Sbjct: 11 LFFLVILVVAPGMKMVVEGQPQLCETKSLNYRGLCLKWRSCKRVCISEGFPDGRCKGFFN 70

Query: 68 NKCECRKP 74
          NKC CRKP
Sbjct: 71 NKCVCRKP 78
The following BLAST results are available for this feature:
BLAST of Spo00514.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902192830|gb|KNA12122.1|2.3e-39100.hypothetical protein SOVF_1287... [more]
gi|731343266|ref|XP_010682809.1|5.3e-2066.2PREDICTED: defensin-like prote... [more]
gi|731343268|ref|XP_010682810.1|5.3e-2066.2PREDICTED: defensin-like prote... [more]
gi|731343264|ref|XP_010682808.1|4.5e-1963.6PREDICTED: defensin-like prote... [more]
gi|870847436|gb|KMS99801.1|7.7e-1965.3hypothetical protein BVRB_1g02... [more]
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BLAST of Spo00514.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QXZ2_SPIOL1.6e-39100.Uncharacterized protein OS=Spi... [more]
A0A0J8C148_BETVU3.7e-2066.2Uncharacterized protein OS=Bet... [more]
A0A0J8C614_BETVU3.1e-1963.6Uncharacterized protein OS=Bet... [more]
A0A0J8BFR3_BETVU5.4e-1965.3Uncharacterized protein OS=Bet... [more]
A0A0J8CSY8_BETVU4.5e-1861.5Uncharacterized protein OS=Bet... [more]
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BLAST of Spo00514.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
DFAX2_BETVU1.8e-752.1Defensin-like protein AX2 OS=B... [more]
DEF09_ARATH2.3e-742.6Putative defensin-like protein... [more]
DFAX1_BETVU8.8e-752.2Defensin-like protein AX1 OS=B... [more]
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BLAST of Spo00514.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G31953.11.3e-842.6low-molecular-weight cysteine-... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003614Knottin, scorpion toxin-likeGENE3D3.30.30.10coord: 30..73
score: 4.
IPR003614Knottin, scorpion toxin-likeunknownSSF57095Scorpion toxin-likecoord: 34..72
score: 2.2
NoneNo IPR availablePANTHERPTHR33147FAMILY NOT NAMEDcoord: 1..73
score: 1.3

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response