Spo30007 (gene) | SpinachBase

Overview


Name	Spo30007
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	PRA1 family protein B3 (AtPRA1.B3) (Prenylated Rab acceptor 2)
Location	SpoScf_01679 : 106026 .. 106670 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAACCTATGGAACAATACCCACATCCCACTCCCCTTCAAACCAACCCGCAACAAACCTCCACTTCATCACACGCGCCACCACCAAGATCCAATCAACCTACACTACCCACCGCCGTCCATGGAACCACCTCTTCTCTCTCTCCTCCCTCTCTCTCCCTTCCTCCTTCAACGACGCCTACTTCCGCTTCAAAACCAACCTCTCCTTCTTTCGCATGAACTACGCCATCATCGCACTCTTAATCCTCTTCCTCTCTCTTCTGTATCACCCAATCTCTCTCCTCGTCTTCCTCCTCACCATGTCGGCATGGCTATTCCTCTACTTCCTCCGTGACGCGCCTCTGTTTGTTTTCGGGTATAATATTGATGATCGCGTTGTGCTCGCTGTTCTCGCTGTTTTGACGGTGGTTTTCTTGCTTCTTACTGATGTTACTGTGAATATCGTGGTGGCGCTTGGTGTTGCTGTTGTTGTGATTGTGGTTCATACGGTGGTGAGAGGGACGGATGATCTTCCTGATACGGCGGTGGGGGGTTTTGAAGATGAGAGTGGCGCGCGTGTTGCTTACAACCGTGGTGCGGGTGGGTTGGGTGATCGGCTTCCGTTGAAGGATACGGCGTCGTCTTCATTCTCTGCTTCCAATTGA

mRNA sequence

ATGACAACCTATGGAACAATACCCACATCCCACTCCCCTTCAAACCAACCCGCAACAAACCTCCACTTCATCACACGCGCCACCACCAAGATCCAATCAACCTACACTACCCACCGCCGTCCATGGAACCACCTCTTCTCTCTCTCCTCCCTCTCTCTCCCTTCCTCCTTCAACGACGCCTACTTCCGCTTCAAAACCAACCTCTCCTTCTTTCGCATGAACTACGCCATCATCGCACTCTTAATCCTCTTCCTCTCTCTTCTGTATCACCCAATCTCTCTCCTCGTCTTCCTCCTCACCATGTCGGCATGGCTATTCCTCTACTTCCTCCGTGACGCGCCTCTGTTTGTTTTCGGGTATAATATTGATGATCGCGTTGTGCTCGCTGTTCTCGCTGTTTTGACGGTGGTTTTCTTGCTTCTTACTGATGTTACTGTGAATATCGTGGTGGCGCTTGGTGTTGCTGTTGTTGTGATTGTGGTTCATACGGTGGTGAGAGGGACGGATGATCTTCCTGATACGGCGGTGGGGGGTTTTGAAGATGAGAGTGGCGCGCGTGTTGCTTACAACCGTGGTGCGGGTGGGTTGGGTGATCGGCTTCCGTTGAAGGATACGGCGTCGTCTTCATTCTCTGCTTCCAATTGA

Coding sequence (CDS)

ATGACAACCTATGGAACAATACCCACATCCCACTCCCCTTCAAACCAACCCGCAACAAACCTCCACTTCATCACACGCGCCACCACCAAGATCCAATCAACCTACACTACCCACCGCCGTCCATGGAACCACCTCTTCTCTCTCTCCTCCCTCTCTCTCCCTTCCTCCTTCAACGACGCCTACTTCCGCTTCAAAACCAACCTCTCCTTCTTTCGCATGAACTACGCCATCATCGCACTCTTAATCCTCTTCCTCTCTCTTCTGTATCACCCAATCTCTCTCCTCGTCTTCCTCCTCACCATGTCGGCATGGCTATTCCTCTACTTCCTCCGTGACGCGCCTCTGTTTGTTTTCGGGTATAATATTGATGATCGCGTTGTGCTCGCTGTTCTCGCTGTTTTGACGGTGGTTTTCTTGCTTCTTACTGATGTTACTGTGAATATCGTGGTGGCGCTTGGTGTTGCTGTTGTTGTGATTGTGGTTCATACGGTGGTGAGAGGGACGGATGATCTTCCTGATACGGCGGTGGGGGGTTTTGAAGATGAGAGTGGCGCGCGTGTTGCTTACAACCGTGGTGCGGGTGGGTTGGGTGATCGGCTTCCGTTGAAGGATACGGCGTCGTCTTCATTCTCTGCTTCCAATTGA

Protein sequence

MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDAYFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGYNIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFEDESGARVAYNRGAGGLGDRLPLKDTASSSFSAS

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo30007.1	Spo30007.1	mRNA

Homology

[Close]

BLAST of Spo30007.1 vs. NCBI nr
Match: gi|902197475|gb|KNA13436.1| (hypothetical protein SOVF_116950 [Spinacia oleracea])

HSP 1 Score: 386.0 bits (990), Expect = 4.400e-104
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA
Sbjct: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
           YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY
Sbjct: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFE 180
           NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFE
Sbjct: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFE 180

Query: 181 DESGARVAYNRGAGGLGDRLPLKDTASSSFSAS 214
           DESGARVAYNRGAGGLGDRLPLKDTASSSFSAS
Sbjct: 181 DESGARVAYNRGAGGLGDRLPLKDTASSSFSAS 213

[Close]

BLAST of Spo30007.1 vs. NCBI nr
Match: gi|731375675|ref|XP_010667330.1| (PREDICTED: PRA1 family protein F3-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 258.1 bits (658), Expect = 1.400e-65
Identity = 156/213 (73.24%), Postives = 172/213 (80.75%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           MTTYGTIPTS SP+     NL FITRA  KIQST TT  RPWN LFSLSSLS P+S ND 
Sbjct: 1   MTTYGTIPTSQSPNTD---NLQFITRAKHKIQSTLTTC-RPWNLLFSLSSLSFPTSINDT 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
           +   KTNLS+FRMNYAIIAL+ILFLSLL+HP+SL+VF L MSAWLF YFLR++PL VFGY
Sbjct: 61  FLTIKTNLSYFRMNYAIIALIILFLSLLWHPLSLIVFTLFMSAWLFFYFLRESPLVVFGY 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFE 180
            + D+ VL +L V TVVFLLLTDVTVNIVVAL VAV VIV H  VR TDDLP + V GFE
Sbjct: 121 EVGDKAVLLLLTVFTVVFLLLTDVTVNIVVALFVAVAVIVAHAAVRRTDDLPVSDV-GFE 180

Query: 181 DESGARVAYNRGAGGLGDRLPLKDTASSSFSAS 214
           DESGARV Y+R  GGLG+RLPLKDTASSSFSAS
Sbjct: 181 DESGARVVYSRNTGGLGERLPLKDTASSSFSAS 208

[Close]

BLAST of Spo30007.1 vs. NCBI nr
Match: gi|870841897|gb|KMS95455.1| (hypothetical protein BVRB_008070 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 177.6 bits (449), Expect = 2.400e-41
Identity = 107/141 (75.89%), Postives = 119/141 (84.40%), Query Frame = 1


		  
Query: 73  MNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGYNIDDRVVLAVLA 132
           MNYAIIAL+ILFLSLL+HP+SL+VF L MSAWLF YFLR++PL VFGY + D+ VL +L 
Sbjct: 1   MNYAIIALIILFLSLLWHPLSLIVFTLFMSAWLFFYFLRESPLVVFGYEVGDKAVLLLLT 60

Query: 133 VLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFEDESGARVAYNRG 192
           V TVVFLLLTDVTVNIVVAL VAV VIV H  VR TDDLP + V GFEDESGARV Y+R 
Sbjct: 61  VFTVVFLLLTDVTVNIVVALFVAVAVIVAHAAVRRTDDLPVSDV-GFEDESGARVVYSRN 120

Query: 193 AGGLGDRLPLKDTASSSFSAS 214
            GGLG+RLPLKDTASSSFSAS
Sbjct: 121 TGGLGERLPLKDTASSSFSAS 140

[Close]

BLAST of Spo30007.1 vs. NCBI nr
Match: gi|702376388|ref|XP_010062605.1| (PREDICTED: PRA1 family protein F2-like [Eucalyptus grandis])

HSP 1 Score: 175.3 bits (443), Expect = 1.200e-40
Identity = 109/186 (58.60%), Postives = 137/186 (73.66%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           MTTYGTIP S S +  PA NL +I RA  +I+S     RRPW  +F   +L LP++F DA
Sbjct: 1   MTTYGTIPASSSST--PAANLEYIARAKERIRSGLA-ERRPWKLMFDFRALRLPANFPDA 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
             R +TNLSFFR NYA++ LLILFLSLL+HPISL+VF++ M+AWLFLYFLRD PL VFG 
Sbjct: 61  LSRVRTNLSFFRTNYAMVFLLILFLSLLWHPISLIVFIVMMAAWLFLYFLRDEPLVVFGR 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFE 180
            IDDRV+LAV++VLT+VFLLLT  TVNI+VA+ +  VV+V+H  +R TDDL      G E
Sbjct: 121 TIDDRVILAVMSVLTIVFLLLTHATVNILVAILIGAVVVVLHAAMRKTDDL-----SGDE 178

Query: 181 DESGAR 187
           + +G R
Sbjct: 181 EAAGTR 178

[Close]

BLAST of Spo30007.1 vs. NCBI nr
Match: gi|802577448|ref|XP_012069002.1| (PREDICTED: PRA1 family protein F2 [Jatropha curcas])

HSP 1 Score: 174.5 bits (441), Expect = 2.000e-40
Identity = 111/197 (56.35%), Postives = 139/197 (70.56%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           MTTYGTIPTS SP     T L +I+RA  +I+     +RRPW  +F+  SL LP+S  +A
Sbjct: 1   MTTYGTIPTSTSPG--ATTKLEYISRAKERIKEGLG-YRRPWKLMFNFRSLGLPASLAEA 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
             R KTN+++FRMNYAII L+ILFLSLL+HPISL+VF++ M+AWLFLYFLRD PL VFG 
Sbjct: 61  MVRVKTNVAYFRMNYAIIILIILFLSLLWHPISLIVFIVMMAAWLFLYFLRDEPLVVFGR 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFE 180
            IDDRVV+  L VLT+VFLLLT VT+N++V+L V VVV+VVH ++R TDDL       F 
Sbjct: 121 TIDDRVVMIALGVLTIVFLLLTRVTLNVLVSLLVGVVVVVVHAIIRRTDDL-------FL 180

Query: 181 DESGARVAYNRGAGGLG 198
           DE    +    G  G G
Sbjct: 181 DEEATGLMTTAGVSGGG 187

[Close]

BLAST of Spo30007.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1N2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_116950 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 3.100e-104
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA
Sbjct: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
           YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY
Sbjct: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFE 180
           NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFE
Sbjct: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFE 180

Query: 181 DESGARVAYNRGAGGLGDRLPLKDTASSSFSAS 214
           DESGARVAYNRGAGGLGDRLPLKDTASSSFSAS
Sbjct: 181 DESGARVAYNRGAGGLGDRLPLKDTASSSFSAS 213

[Close]

BLAST of Spo30007.1 vs. UniProtKB/TrEMBL
Match: A0A0J8DX62_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_008070 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.700e-41
Identity = 107/141 (75.89%), Postives = 119/141 (84.40%), Query Frame = 1


		  
Query: 73  MNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGYNIDDRVVLAVLA 132
           MNYAIIAL+ILFLSLL+HP+SL+VF L MSAWLF YFLR++PL VFGY + D+ VL +L 
Sbjct: 1   MNYAIIALIILFLSLLWHPLSLIVFTLFMSAWLFFYFLRESPLVVFGYEVGDKAVLLLLT 60

Query: 133 VLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFEDESGARVAYNRG 192
           V TVVFLLLTDVTVNIVVAL VAV VIV H  VR TDDLP + V GFEDESGARV Y+R 
Sbjct: 61  VFTVVFLLLTDVTVNIVVALFVAVAVIVAHAAVRRTDDLPVSDV-GFEDESGARVVYSRN 120

Query: 193 AGGLGDRLPLKDTASSSFSAS 214
            GGLG+RLPLKDTASSSFSAS
Sbjct: 121 TGGLGERLPLKDTASSSFSAS 140

[Close]

BLAST of Spo30007.1 vs. UniProtKB/TrEMBL
Match: A0A059BUE8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03124 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.200e-41
Identity = 109/186 (58.60%), Postives = 137/186 (73.66%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           MTTYGTIP S S +  PA NL +I RA  +I+S     RRPW  +F   +L LP++F DA
Sbjct: 1   MTTYGTIPASSSST--PAANLEYIARAKERIRSGLA-ERRPWKLMFDFRALRLPANFPDA 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
             R +TNLSFFR NYA++ LLILFLSLL+HPISL+VF++ M+AWLFLYFLRD PL VFG 
Sbjct: 61  LSRVRTNLSFFRTNYAMVFLLILFLSLLWHPISLIVFIVMMAAWLFLYFLRDEPLVVFGR 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFE 180
            IDDRV+LAV++VLT+VFLLLT  TVNI+VA+ +  VV+V+H  +R TDDL      G E
Sbjct: 121 TIDDRVILAVMSVLTIVFLLLTHATVNILVAILIGAVVVVLHAAMRKTDDL-----SGDE 178

Query: 181 DESGAR 187
           + +G R
Sbjct: 181 EAAGTR 178

[Close]

BLAST of Spo30007.1 vs. UniProtKB/TrEMBL
Match: A0A067KX74_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24790 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.400e-40
Identity = 111/197 (56.35%), Postives = 139/197 (70.56%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           MTTYGTIPTS SP     T L +I+RA  +I+     +RRPW  +F+  SL LP+S  +A
Sbjct: 1   MTTYGTIPTSTSPG--ATTKLEYISRAKERIKEGLG-YRRPWKLMFNFRSLGLPASLAEA 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
             R KTN+++FRMNYAII L+ILFLSLL+HPISL+VF++ M+AWLFLYFLRD PL VFG 
Sbjct: 61  MVRVKTNVAYFRMNYAIIILIILFLSLLWHPISLIVFIVMMAAWLFLYFLRDEPLVVFGR 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFE 180
            IDDRVV+  L VLT+VFLLLT VT+N++V+L V VVV+VVH ++R TDDL       F 
Sbjct: 121 TIDDRVVMIALGVLTIVFLLLTRVTLNVLVSLLVGVVVVVVHAIIRRTDDL-------FL 180

Query: 181 DESGARVAYNRGAGGLG 198
           DE    +    G  G G
Sbjct: 181 DEEATGLMTTAGVSGGG 187

[Close]

BLAST of Spo30007.1 vs. UniProtKB/TrEMBL
Match: A0A068TNV5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021874001 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.600e-39
Identity = 107/185 (57.84%), Postives = 135/185 (72.97%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           MTTYGTIPTS   S   +T L +ITRA  +I+    T RRPW  +F+  S+ LP SF DA
Sbjct: 1   MTTYGTIPTS---SGGGSTRLEYITRAKERIKEGLGT-RRPWREMFNFHSIRLPPSFRDA 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
             R KTN+S+F MNYAI+ L+ILFLSLL+HPISL+VF++ M+AWLFLYFLRD PL +FG 
Sbjct: 61  LARIKTNVSYFSMNYAIVVLVILFLSLLWHPISLIVFIVMMAAWLFLYFLRDEPLVIFGR 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPD-TAVGGF 180
            I+DRVVL VL+VLT+V LLLT  TVNI+V+L +  VV+++H  +R T+DL D  A GG 
Sbjct: 121 LINDRVVLIVLSVLTIVLLLLTHATVNILVSLLIGAVVVLIHAALRKTEDLMDEEAAGGL 180

Query: 181 EDESG 185
              SG
Sbjct: 181 LGSSG 181

[Close]

BLAST of Spo30007.1 vs. ExPASy Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.100e-35
Identity = 102/192 (53.12%), Postives = 124/192 (64.58%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           MT YG IPTS  PS  PA +L +I+RA  +I+S   T RRPW  +F   S++LP  F DA
Sbjct: 1   MTNYGAIPTSSHPS--PAIDLEYISRAKHRIKSGLAT-RRPWKSMFDFESMTLPHGFFDA 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
             R KTNL +FR NYAI  L ILFLSLLYHP SL+V  + +  W+FLYFLRD PL VFGY
Sbjct: 61  ISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGY 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFE 180
            IDDR VL  L+VLTVV LLLT  T NI+ +L  A V++++H  VR +D+L       F 
Sbjct: 121 QIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNL-------FL 180

Query: 181 DESGARVAYNRG 193
           DE  A V    G
Sbjct: 181 DEEAAAVTEASG 182

[Close]

BLAST of Spo30007.1 vs. ExPASy Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.200e-32
Identity = 86/171 (50.29%), Postives = 120/171 (70.18%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           MT YG IPTS   S  P  ++  ++RA  +I++   T RR W  +F   S+ LP   +DA
Sbjct: 1   MTNYGAIPTSSHAS--PLVDVESLSRAKHRIKAGLAT-RRAWRVMFDFHSMGLPHGVSDA 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
           + R KTNL++FRMNYAI+ L+++F SL++HP SL+VF + +  W+FLYFLRD P+ +F +
Sbjct: 61  FTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRF 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDL 172
            IDDR VL VL+VLTVV LLLT+ T NIV AL    V++++H+VVR T+DL
Sbjct: 121 QIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDL 168

[Close]

BLAST of Spo30007.1 vs. ExPASy Swiss-Prot
Match: PR1F4_ARATH (PRA1 family protein F4 OS=Arabidopsis thaliana GN=PRA1F4 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.700e-28
Identity = 83/171 (48.54%), Postives = 109/171 (63.74%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           M     I TS   S  PA N   I+RA  +I+    T RR W  +F L S  LP   +D 
Sbjct: 1   MANNDEITTSSHAS--PAVNHESISRAKQRIKDGLAT-RRSWRVMFDLHSTGLPHGVSDV 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
           + R KTNL++FR NYAI+ L ++F SL++HP SL+VF   +  W+FLYFLRD PL VF +
Sbjct: 61  FSRIKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRF 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDL 172
            IDDR VL  L+V+T+V LLLT+ T NIV AL    V++++H V+R TDDL
Sbjct: 121 QIDDRAVLIGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDL 168

[Close]

BLAST of Spo30007.1 vs. ExPASy Swiss-Prot
Match: PR1F1_ARATH (PRA1 family protein F1 OS=Arabidopsis thaliana GN=PRA1F1 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.700e-24
Identity = 73/174 (41.95%), Postives = 101/174 (58.05%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           MTTYGT   +   SN  A  L +ITR   + + +    RRPW  +  L S + P      
Sbjct: 1   MTTYGT---NQKSSNDLAPKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATV 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
             R + N  +F+ NY I+ L  +FLSL+++P SLLV L  + AWLFLYFLRD PL VF  
Sbjct: 61  ITRIRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLRDEPLTVFDR 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDT 175
            ID R+VL +++V+T+  L LTD  +NI VA+    + ++ H  VR T+DL  T
Sbjct: 121 EIDHRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQT 171

[Close]

BLAST of Spo30007.1 vs. ExPASy Swiss-Prot
Match: PRA1E_ARATH (PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.000e-20
Identity = 73/181 (40.33%), Postives = 110/181 (60.77%), Query Frame = 1


		  
Query: 26  RATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDAYFRFKTNLSFFRMNYAIIALLILFL 85
           RA    QS  TT  RPW  +  LS+LSLP  +++A    K N+S+FR NYA+  L I+FL
Sbjct: 35  RAKQTTQSMITT-LRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFL 94

Query: 86  SLLYHPISLLVFLLTMSAWLFLYFLRDA--PLFVFGYNIDDRVVLAVLAVLTVVFLLLTD 145
            L+YHP+S++ F++    W+ LYF RDA   + + G  +DD++VL +L+++TV+ L+ TD
Sbjct: 95  GLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTD 154

Query: 146 VTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFEDESGARVAYNRG---AGGLGDRL 202
           V  N++V+L + ++++  H   R TDDL       F DE  AR    RG   + G G+R 
Sbjct: 155 VGENVLVSLIIGLLIVGAHGAFRNTDDL-------FLDEESAR----RGGLVSAGSGNRP 203

[Close]

BLAST of Spo30007.1 vs. TAIR (Arabidopsis)
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 151.4 bits (381), Expect = 6.400e-37
Identity = 102/192 (53.12%), Postives = 124/192 (64.58%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           MT YG IPTS  PS  PA +L +I+RA  +I+S   T RRPW  +F   S++LP  F DA
Sbjct: 1   MTNYGAIPTSSHPS--PAIDLEYISRAKHRIKSGLAT-RRPWKSMFDFESMTLPHGFFDA 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
             R KTNL +FR NYAI  L ILFLSLLYHP SL+V  + +  W+FLYFLRD PL VFGY
Sbjct: 61  ISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGY 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFE 180
            IDDR VL  L+VLTVV LLLT  T NI+ +L  A V++++H  VR +D+L       F 
Sbjct: 121 QIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNL-------FL 180

Query: 181 DESGARVAYNRG 193
           DE  A V    G
Sbjct: 181 DEEAAAVTEASG 182

[Close]

BLAST of Spo30007.1 vs. TAIR (Arabidopsis)
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 141.4 bits (355), Expect = 6.600e-34
Identity = 86/171 (50.29%), Postives = 120/171 (70.18%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           MT YG IPTS   S  P  ++  ++RA  +I++   T RR W  +F   S+ LP   +DA
Sbjct: 1   MTNYGAIPTSSHAS--PLVDVESLSRAKHRIKAGLAT-RRAWRVMFDFHSMGLPHGVSDA 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
           + R KTNL++FRMNYAI+ L+++F SL++HP SL+VF + +  W+FLYFLRD P+ +F +
Sbjct: 61  FTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRF 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDL 172
            IDDR VL VL+VLTVV LLLT+ T NIV AL    V++++H+VVR T+DL
Sbjct: 121 QIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDL 168

[Close]

BLAST of Spo30007.1 vs. TAIR (Arabidopsis)
Match: AT3G13710.1 (prenylated RAB acceptor 1.F4)

HSP 1 Score: 125.2 bits (313), Expect = 4.900e-29
Identity = 83/171 (48.54%), Postives = 109/171 (63.74%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           M     I TS   S  PA N   I+RA  +I+    T RR W  +F L S  LP   +D 
Sbjct: 1   MANNDEITTSSHAS--PAVNHESISRAKQRIKDGLAT-RRSWRVMFDLHSTGLPHGVSDV 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
           + R KTNL++FR NYAI+ L ++F SL++HP SL+VF   +  W+FLYFLRD PL VF +
Sbjct: 61  FSRIKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRF 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDL 172
            IDDR VL  L+V+T+V LLLT+ T NIV AL    V++++H V+R TDDL
Sbjct: 121 QIDDRAVLIGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDL 168

[Close]

BLAST of Spo30007.1 vs. TAIR (Arabidopsis)
Match: AT1G17700.1 (prenylated RAB acceptor 1.F1)

HSP 1 Score: 112.1 bits (279), Expect = 4.300e-25
Identity = 73/174 (41.95%), Postives = 101/174 (58.05%), Query Frame = 1


		  
Query: 1   MTTYGTIPTSHSPSNQPATNLHFITRATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDA 60
           MTTYGT   +   SN  A  L +ITR   + + +    RRPW  +  L S + P      
Sbjct: 1   MTTYGT---NQKSSNDLAPKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATV 60

Query: 61  YFRFKTNLSFFRMNYAIIALLILFLSLLYHPISLLVFLLTMSAWLFLYFLRDAPLFVFGY 120
             R + N  +F+ NY I+ L  +FLSL+++P SLLV L  + AWLFLYFLRD PL VF  
Sbjct: 61  ITRIRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLRDEPLTVFDR 120

Query: 121 NIDDRVVLAVLAVLTVVFLLLTDVTVNIVVALGVAVVVIVVHTVVRGTDDLPDT 175
            ID R+VL +++V+T+  L LTD  +NI VA+    + ++ H  VR T+DL  T
Sbjct: 121 EIDHRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQT 171

[Close]

BLAST of Spo30007.1 vs. TAIR (Arabidopsis)
Match: AT1G08770.1 (prenylated RAB acceptor 1.E)

HSP 1 Score: 101.7 bits (252), Expect = 5.800e-22
Identity = 73/181 (40.33%), Postives = 110/181 (60.77%), Query Frame = 1


		  
Query: 26  RATTKIQSTYTTHRRPWNHLFSLSSLSLPSSFNDAYFRFKTNLSFFRMNYAIIALLILFL 85
           RA    QS  TT  RPW  +  LS+LSLP  +++A    K N+S+FR NYA+  L I+FL
Sbjct: 35  RAKQTTQSMITT-LRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFL 94

Query: 86  SLLYHPISLLVFLLTMSAWLFLYFLRDA--PLFVFGYNIDDRVVLAVLAVLTVVFLLLTD 145
            L+YHP+S++ F++    W+ LYF RDA   + + G  +DD++VL +L+++TV+ L+ TD
Sbjct: 95  GLIYHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTD 154

Query: 146 VTVNIVVALGVAVVVIVVHTVVRGTDDLPDTAVGGFEDESGARVAYNRG---AGGLGDRL 202
           V  N++V+L + ++++  H   R TDDL       F DE  AR    RG   + G G+R 
Sbjct: 155 VGENVLVSLIIGLLIVGAHGAFRNTDDL-------FLDEESAR----RGGLVSAGSGNRP 203

The following BLAST results are available for this feature:

BLAST of Spo30007.1 vs. NCBI nr
BLAST of Spo30007.1 vs. UniProtKB/TrEMBL
BLAST of Spo30007.1 vs. ExPASy Swiss-Prot
BLAST of Spo30007.1 vs. TAIR (Arabidopsis)

BLAST of Spo30007.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902197475\|gb\|KNA13436.1\|	4.4e-104	100.	hypothetical protein SOVF_1169...	[more]
gi\|731375675\|ref\|XP_010667330.1\|	1.4e-65	73.2	PREDICTED: PRA1 family protein...	[more]
gi\|870841897\|gb\|KMS95455.1\|	2.4e-41	75.8	hypothetical protein BVRB_0080...	[more]
gi\|702376388\|ref\|XP_010062605.1\|	1.2e-40	58.6	PREDICTED: PRA1 family protein...	[more]
gi\|802577448\|ref\|XP_012069002.1\|	2.0e-40	56.3	PREDICTED: PRA1 family protein...	[more]

BLAST of Spo30007.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R1N2_SPIOL	3.1e-104	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8DX62_BETVU	1.7e-41	75.8	Uncharacterized protein OS=Bet...	[more]
A0A059BUE8_EUCGR	8.2e-41	58.6	Uncharacterized protein OS=Euc...	[more]
A0A067KX74_JATCU	1.4e-40	56.3	Uncharacterized protein OS=Jat...	[more]
A0A068TNV5_COFCA	2.6e-39	57.8	Uncharacterized protein OS=Cof...	[more]

BLAST of Spo30007.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PR1F2_ARATH	1.1e-35	53.1	PRA1 family protein F2 OS=Arab...	[more]
PR1F3_ARATH	1.2e-32	50.2	PRA1 family protein F3 OS=Arab...	[more]
PR1F4_ARATH	8.7e-28	48.5	PRA1 family protein F4 OS=Arab...	[more]
PR1F1_ARATH	7.7e-24	41.9	PRA1 family protein F1 OS=Arab...	[more]
PRA1E_ARATH	1.0e-20	40.3	PRA1 family protein E OS=Arabi...	[more]

BLAST of Spo30007.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G55190.1	6.4e-37	53.1	PRA1 (Prenylated rab acceptor)...	[more]
AT3G13720.1	6.6e-34	50.2	PRA1 (Prenylated rab acceptor)...	[more]
AT3G13710.1	4.9e-29	48.5	prenylated RAB acceptor 1.F4	[more]
AT1G17700.1	4.3e-25	41.9	prenylated RAB acceptor 1.F1	[more]
AT1G08770.1	5.8e-22	40.3	prenylated RAB acceptor 1.E	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 37..171 score: 2.9
None	No IPR available	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..167 score: 9.7
None	No IPR available	PANTHER	PTHR19317:SF2	PRA1 FAMILY PROTEIN C-RELATED	coord: 1..167 score: 9.7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0010229	inflorescence development
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:2000037	regulation of stomatal complex patterning
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0015824	proline transport
biological_process	GO:0009626	plant-type hypersensitive response
biological_process	GO:0010227	floral organ abscission
biological_process	GO:0009814	defense response, incompatible interaction
biological_process	GO:0009987	cellular process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0044425	membrane part
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004674	protein serine/threonine kinase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo04536	0.69	Barchart \| Table
Spo20946	0.69	Barchart \| Table
Spo17323	0.65	Barchart \| Table