Spo28098 (gene)

Overview
NameSpo28098
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionMitochondrial import receptor subunit TOM7-1
Locationchr1 : 47043087 .. 47043290 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATGCCGAAAGGAAAGGGAAGAAAAGCTCGAGTTGAAGAAGAAGCTTGCAATACCTTGAAGTGCGTGCAAGATTGGACTAATTGGAGTTTGAAGAAGGCTAAAGTTATCACTCACTATGGTTTAATTCCTCTGATCATCTACATCGGGATGAACTCTGAGCCTAAGCCTACTCTTTCTCAGCTTCTCTCTCCTTTTTAA

mRNA sequence

ATGGCGATGCCGAAAGGAAAGGGAAGAAAAGCTCGAGTTGAAGAAGAAGCTTGCAATACCTTGAAGTGCGTGCAAGATTGGACTAATTGGAGTTTGAAGAAGGCTAAAGTTATCACTCACTATGGTTTAATTCCTCTGATCATCTACATCGGGATGAACTCTGAGCCTAAGCCTACTCTTTCTCAGCTTCTCTCTCCTTTTTAA

Coding sequence (CDS)

ATGGCGATGCCGAAAGGAAAGGGAAGAAAAGCTCGAGTTGAAGAAGAAGCTTGCAATACCTTGAAGTGCGTGCAAGATTGGACTAATTGGAGTTTGAAGAAGGCTAAAGTTATCACTCACTATGGTTTAATTCCTCTGATCATCTACATCGGGATGAACTCTGAGCCTAAGCCTACTCTTTCTCAGCTTCTCTCTCCTTTTTAA

Protein sequence

MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLLSPF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo28098.1Spo28098.1mRNA


Homology
[Close]
BLAST of Spo28098.1 vs. NCBI nr
Match: gi|902225733|gb|KNA20165.1| (hypothetical protein SOVF_054820 [Spinacia oleracea])

HSP 1 Score: 143.7 bits (361), Expect = 1.200e-31
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1 

		  

Query: 1  MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL 60
          MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL
Sbjct: 1  MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL 60

Query: 61 SQLLSPF 68
          SQLLSPF
Sbjct: 61 SQLLSPF 67
[Close]
BLAST of Spo28098.1 vs. NCBI nr
Match: gi|731368403|ref|XP_010696128.1| (PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 122.9 bits (307), Expect = 2.200e-25
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 1 

		  

Query: 1  MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL 60
          MAM KGKGRKAR EEEA  TLKCV+DWTNWSLKKA+VITHYGLIPLIIYIGMNSEPKPT+
Sbjct: 1  MAM-KGKGRKARDEEEAGKTLKCVKDWTNWSLKKARVITHYGLIPLIIYIGMNSEPKPTI 60

Query: 61 SQLLSPF 68
          SQLLSPF
Sbjct: 61 SQLLSPF 66
[Close]
BLAST of Spo28098.1 vs. NCBI nr
Match: gi|720023747|ref|XP_010263429.1| (PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Nelumbo nucifera])

HSP 1 Score: 90.1 bits (222), Expect = 1.600e-15
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 1 

		  

Query: 5  KGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLL 64
          K  GR    EE +  T+KC++DW+ W++KKAKVITHYG IPL+I IG+NSEPKPTLSQLL
Sbjct: 29 KVSGRSEASEERS--TVKCLKDWSTWTMKKAKVITHYGFIPLVIIIGVNSEPKPTLSQLL 88

Query: 65 SPF 68
          +PF
Sbjct: 89 TPF 89
[Close]
BLAST of Spo28098.1 vs. NCBI nr
Match: gi|769824907|ref|XP_011623506.1| (PREDICTED: mitochondrial import receptor subunit TOM7-1-like [Amborella trichopoda])

HSP 1 Score: 89.7 bits (221), Expect = 2.000e-15
Identity = 40/64 (62.50%), Postives = 52/64 (81.25%), Query Frame = 1 

		  

Query: 5  KGKGRKARVE-EEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQL 64
          KGKG+  +++  E  + +KCV++W+ W+LKKAKV+ HYG IPLII IGMNSEPKP LSQL
Sbjct: 8  KGKGKLGKIKGSEPPSKMKCVKEWSTWTLKKAKVVAHYGFIPLIIVIGMNSEPKPYLSQL 67

Query: 65 LSPF 68
          +SPF
Sbjct: 68 VSPF 71
[Close]
BLAST of Spo28098.1 vs. NCBI nr
Match: gi|225443425|ref|XP_002269243.1| (PREDICTED: mitochondrial import receptor subunit TOM7-2 [Vitis vinifera])

HSP 1 Score: 89.4 bits (220), Expect = 2.700e-15
Identity = 41/65 (63.08%), Postives = 51/65 (78.46%), Query Frame = 1 

		  

Query: 5  KGKGRKARVEE---EACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLS 64
          KGKG+  +  +   E  +T KC++DW+NW+LKKAKVITHYG IP++I IGMNSEPKP L 
Sbjct: 8  KGKGKSIKGSKDGSEGHSTAKCLKDWSNWALKKAKVITHYGFIPMVIIIGMNSEPKPQLY 67

Query: 65 QLLSP 67
          QLLSP
Sbjct: 68 QLLSP 72
[Close]
BLAST of Spo28098.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKZ7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_054820 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 8.300e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 1 

		  

Query: 1  MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL 60
          MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL
Sbjct: 1  MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL 60

Query: 61 SQLLSPF 68
          SQLLSPF
Sbjct: 61 SQLLSPF 67
[Close]
BLAST of Spo28098.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BAX4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g177880 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.500e-25
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 1 

		  

Query: 1  MAMPKGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL 60
          MAM KGKGRKAR EEEA  TLKCV+DWTNWSLKKA+VITHYGLIPLIIYIGMNSEPKPT+
Sbjct: 1  MAM-KGKGRKARDEEEAGKTLKCVKDWTNWSLKKARVITHYGLIPLIIYIGMNSEPKPTI 60

Query: 61 SQLLSPF 68
          SQLLSPF
Sbjct: 61 SQLLSPF 66
[Close]
BLAST of Spo28098.1 vs. UniProtKB/TrEMBL
Match: Q0WLA8_ARATH (TOM7-like protein OS=Arabidopsis thaliana GN=At5g41685 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 9.200e-15
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 1 

		  

Query: 5  KGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLL 64
          KGKG K     +  +    V++WTNWSLKKAKV+THYG IPL+I++GMNS+PKP L QLL
Sbjct: 13 KGKGSKGASSSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGMNSDPKPHLFQLL 72

Query: 65 SP 67
          SP
Sbjct: 73 SP 74
[Close]
BLAST of Spo28098.1 vs. UniProtKB/TrEMBL
Match: S8C8K7_9LAMI (Uncharacterized protein OS=Genlisea aurea GN=M569_11578 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.200e-14
Identity = 44/66 (66.67%), Postives = 48/66 (72.73%), Query Frame = 1 

		  

Query: 3  MPKGKGRKARVEEE--ACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTL 62
          M K K   A  EEE  A    K V+ W+NW LKKAKVITHYG IPLII IGMNSEPKP++
Sbjct: 15 MSKKKAAAAEGEEEGSAAAATKLVKQWSNWGLKKAKVITHYGFIPLIIIIGMNSEPKPSI 74

Query: 63 SQLLSP 67
          SQLLSP
Sbjct: 75 SQLLSP 80
[Close]
BLAST of Spo28098.1 vs. UniProtKB/TrEMBL
Match: M0TBX8_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.200e-14
Identity = 41/61 (67.21%), Postives = 46/61 (75.41%), Query Frame = 1 

		  

Query: 6  GKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLLS 65
          GKG K   E  AC   KC ++W+ W++KKAKVITHYG IPLII IGMNSEPKP L QLLS
Sbjct: 14 GKGSKGPEERSAC---KCFKEWSTWAMKKAKVITHYGFIPLIITIGMNSEPKPQLYQLLS 71

Query: 66 P 67
          P
Sbjct: 74 P 71
[Close]
BLAST of Spo28098.1 vs. ExPASy Swiss-Prot
Match: TOM71_ARATH (Mitochondrial import receptor subunit TOM7-1 OS=Arabidopsis thaliana GN=TOM7-1 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 8.300e-17
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 1 

		  

Query: 5  KGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLL 64
          KGKG K     +  +    V++WTNWSLKKAKV+THYG IPL+I++GMNS+PKP L QLL
Sbjct: 13 KGKGSKGASSSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGMNSDPKPHLFQLL 72

Query: 65 SP 67
          SP
Sbjct: 73 SP 74
[Close]
BLAST of Spo28098.1 vs. ExPASy Swiss-Prot
Match: TOM7A_SOLTU (Mitochondrial import receptor subunit TOM7-1 OS=Solanum tuberosum GN=TOM7-1 PE=3 SV=3)

HSP 1 Score: 81.6 bits (200), Expect = 3.500e-15
Identity = 42/71 (59.15%), Postives = 50/71 (70.42%), Query Frame = 1 

		  

Query: 1  MAMPKGKG-RKARVEEEACNTL----KCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSE 60
          M  PKGK  +KA   +E    +    K V++W  W+ KKAKVITHYG IPL+I IGMNSE
Sbjct: 1  MLKPKGKNTKKAAAADEDDGAVAVVGKFVKEWGTWTAKKAKVITHYGFIPLVIIIGMNSE 60

Query: 61 PKPTLSQLLSP 67
          PKP+LSQLLSP
Sbjct: 61 PKPSLSQLLSP 71
[Close]
BLAST of Spo28098.1 vs. ExPASy Swiss-Prot
Match: TOM72_ARATH (Mitochondrial import receptor subunit TOM7-2 OS=Arabidopsis thaliana GN=TOM7-2 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.300e-14
Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 1 

		  

Query: 7  KGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLLSP 66
          KG  +     A +  K  +DWTNWSL+KAKV THYG IPLII IGMNS+PKP L  LLSP
Sbjct: 17 KGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIIIGMNSDPKPHLFHLLSP 76
[Close]
BLAST of Spo28098.1 vs. TAIR (Arabidopsis)
Match: AT5G41685.1 (Mitochondrial outer membrane translocase complex, subunit Tom7)

HSP 1 Score: 87.0 bits (214), Expect = 4.700e-18
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 1 

		  

Query: 5  KGKGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLL 64
          KGKG K     +  +    V++WTNWSLKKAKV+THYG IPL+I++GMNS+PKP L QLL
Sbjct: 13 KGKGSKGASSSDDKSKFDVVKEWTNWSLKKAKVVTHYGFIPLVIFVGMNSDPKPHLFQLL 72

Query: 65 SP 67
          SP
Sbjct: 73 SP 74
[Close]
BLAST of Spo28098.1 vs. TAIR (Arabidopsis)
Match: AT1G64220.1 (translocase of outer membrane 7 kDa subunit 2)

HSP 1 Score: 79.7 bits (195), Expect = 7.500e-16
Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = 1 

		  

Query: 7  KGRKARVEEEACNTLKCVQDWTNWSLKKAKVITHYGLIPLIIYIGMNSEPKPTLSQLLSP 66
          KG  +     A +  K  +DWTNWSL+KAKV THYG IPLII IGMNS+PKP L  LLSP
Sbjct: 17 KGSSSSSSSSASSKYKVFKDWTNWSLQKAKVATHYGFIPLIIIIGMNSDPKPHLFHLLSP 76
The following BLAST results are available for this feature:
BLAST of Spo28098.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902225733|gb|KNA20165.1|1.2e-31100.hypothetical protein SOVF_0548... [more]
gi|731368403|ref|XP_010696128.1|2.2e-2589.5PREDICTED: mitochondrial impor... [more]
gi|720023747|ref|XP_010263429.1|1.6e-1565.0PREDICTED: mitochondrial impor... [more]
gi|769824907|ref|XP_011623506.1|2.0e-1562.5PREDICTED: mitochondrial impor... [more]
gi|225443425|ref|XP_002269243.1|2.7e-1563.0PREDICTED: mitochondrial impor... [more]
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BLAST of Spo28098.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RKZ7_SPIOL8.3e-32100.Uncharacterized protein OS=Spi... [more]
A0A0J8BAX4_BETVU1.5e-2589.5Uncharacterized protein OS=Bet... [more]
Q0WLA8_ARATH9.2e-1561.2TOM7-like protein OS=Arabidops... [more]
S8C8K7_9LAMI1.2e-1466.6Uncharacterized protein OS=Gen... [more]
M0TBX8_MUSAM1.2e-1467.2Uncharacterized protein OS=Mus... [more]
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BLAST of Spo28098.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
TOM71_ARATH8.3e-1761.2Mitochondrial import receptor ... [more]
TOM7A_SOLTU3.5e-1559.1Mitochondrial import receptor ... [more]
TOM72_ARATH1.3e-1461.6Mitochondrial import receptor ... [more]
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BLAST of Spo28098.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G41685.14.7e-1861.2Mitochondrial outer membrane t... [more]
AT1G64220.17.5e-1661.6translocase of outer membrane ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012621Mitochondrial import receptor subunit TOM7PFAMPF08038Tom7coord: 26..64
score: 4.6
NoneNo IPR availablePANTHERPTHR34944FAMILY NOT NAMEDcoord: 1..67
score: 1.6
NoneNo IPR availablePANTHERPTHR34944:SF2MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM7-1-RELATEDcoord: 1..67
score: 1.6

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030150 protein import into mitochondrial matrix
biological_process GO:0009853 photorespiration
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0016049 cell growth
biological_process GO:0000902 cell morphogenesis
biological_process GO:0007030 Golgi organization
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006972 hyperosmotic response
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0003333 amino acid transmembrane transport
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0006863 purine nucleobase transport
biological_process GO:0046686 response to cadmium ion
biological_process GO:0051788 response to misfolded protein
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0007033 vacuole organization
biological_process GO:0009741 response to brassinosteroid
biological_process GO:0055085 transmembrane transport
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0042545 cell wall modification
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0001510 RNA methylation
biological_process GO:0045040 protein import into mitochondrial outer membrane
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0010951 negative regulation of endopeptidase activity
biological_process GO:0009060 aerobic respiration
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
biological_process GO:0071806 protein transmembrane transport
biological_process GO:0006508 proteolysis
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0032544 plastid translation
biological_process GO:0000105 histidine biosynthetic process
biological_process GO:0006021 inositol biosynthetic process
biological_process GO:0046854 phosphatidylinositol phosphorylation
biological_process GO:0019872 streptomycin biosynthetic process
biological_process GO:0060003 copper ion export
biological_process GO:0008152 metabolic process
biological_process GO:0006833 water transport
biological_process GO:0006547 histidine metabolic process
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0006465 signal peptide processing
biological_process GO:0009306 protein secretion
biological_process GO:0008380 RNA splicing
biological_process GO:0006457 protein folding
biological_process GO:0009814 defense response, incompatible interaction
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009737 response to abscisic acid
biological_process GO:0009409 response to cold
biological_process GO:0006414 translational elongation
biological_process GO:0009657 plastid organization
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0010200 response to chitin
biological_process GO:0009620 response to fungus
biological_process GO:0009753 response to jasmonic acid
biological_process GO:0009611 response to wounding
biological_process GO:0016070 RNA metabolic process
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0006427 histidyl-tRNA aminoacylation
biological_process GO:0010207 photosystem II assembly
biological_process GO:0031990 mRNA export from nucleus in response to heat stress
biological_process GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
biological_process GO:0045948 positive regulation of translational initiation
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0034402 recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
biological_process GO:0009902 chloroplast relocation
biological_process GO:0042793 plastid transcription
biological_process GO:0009987 cellular process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0006364 rRNA processing
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0009058 biosynthetic process
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0006810 transport
biological_process GO:0016311 dephosphorylation
biological_process GO:0006468 protein phosphorylation
biological_process GO:0044281 small molecule metabolic process
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0008283 cell proliferation
biological_process GO:0071840 cellular component organization or biogenesis
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0044375 regulation of peroxisome size
biological_process GO:0016043 cellular component organization
biological_process GO:0031347 regulation of defense response
biological_process GO:0019682 glyceraldehyde-3-phosphate metabolic process
biological_process GO:0006139 nucleobase-containing compound metabolic process
biological_process GO:0019684 photosynthesis, light reaction
biological_process GO:0016559 peroxisome fission
biological_process GO:0046034 ATP metabolic process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0010048 vernalization response
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0097034 obsolete mitochondrial respiratory chain complex IV biogenesis
biological_process GO:0097031 obsolete mitochondrial respiratory chain complex I biogenesis
biological_process GO:0000956 nuclear-transcribed mRNA catabolic process
biological_process GO:0006397 mRNA processing
biological_process GO:0000373 Group II intron splicing
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0046939 nucleotide phosphorylation
biological_process GO:0000914 phragmoplast assembly
biological_process GO:0010155 regulation of proton transport
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0051604 protein maturation
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0010342 endosperm cellularization
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006544 glycine metabolic process
biological_process GO:0006096 glycolytic process
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0009651 response to salt stress
biological_process GO:0097056 selenocysteinyl-tRNA(Sec) biosynthetic process
biological_process GO:0006434 seryl-tRNA aminoacylation
biological_process GO:0006566 threonine metabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0080005 photosystem stoichiometry adjustment
biological_process GO:0006412 translation
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0005840 ribosome
cellular_component GO:0044424 intracellular part
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005886 plasma membrane
cellular_component GO:0010287 plastoglobule
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009840 chloroplastic endopeptidase Clp complex
cellular_component GO:0010319 stromule
cellular_component GO:0005665 DNA-directed RNA polymerase II, core complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009536 plastid
cellular_component GO:0005829 cytosol
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005732 small nucleolar ribonucleoprotein complex
cellular_component GO:0000932 P-body
cellular_component GO:0016272 prefoldin complex
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005681 spliceosomal complex
cellular_component GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0022626 cytosolic ribosome
cellular_component GO:0009506 plasmodesma
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
cellular_component GO:0005742 mitochondrial outer membrane translocase complex
cellular_component GO:0005751 mitochondrial respiratory chain complex IV
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0016471 vacuolar proton-transporting V-type ATPase complex
cellular_component GO:0005730 nucleolus
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005618 cell wall
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0009579 thylakoid
cellular_component GO:0045298 tubulin complex
cellular_component GO:0005779 integral component of peroxisomal membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0016020 membrane
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009707 chloroplast outer membrane
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0031177 phosphopantetheine binding
molecular_function GO:0004828 serine-tRNA ligase activity
molecular_function GO:0019843 rRNA binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0004821 histidine-tRNA ligase activity
molecular_function GO:0004129 cytochrome-c oxidase activity
molecular_function GO:0008266 poly(U) RNA binding
molecular_function GO:0004017 adenylate kinase activity
molecular_function GO:0016887 ATPase activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0008565 protein transporter activity
molecular_function GO:0008934 inositol monophosphate 1-phosphatase activity
molecular_function GO:0031369 translation initiation factor binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0004177 aminopeptidase activity
molecular_function GO:0004008 copper-exporting ATPase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0042802 identical protein binding
molecular_function GO:0052833 inositol monophosphate 4-phosphatase activity
molecular_function GO:0052832 inositol monophosphate 3-phosphatase activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0003727 single-stranded RNA binding
molecular_function GO:0004401 histidinol-phosphatase activity
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0015171 amino acid transmembrane transporter activity
molecular_function GO:0004596 peptide alpha-N-acetyltransferase activity
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003735 structural constituent of ribosome
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo217680.83Barchart | Table
Spo079550.79Barchart | Table
Spo013050.78Barchart | Table
Spo030740.75Barchart | Table
Spo200710.74Barchart | Table
Spo055470.74Barchart | Table
Spo098030.74Barchart | Table
Spo300340.74Barchart | Table
Spo171100.74Barchart | Table
Spo073060.74Barchart | Table
Spo210270.73Barchart | Table
Spo131070.73Barchart | Table
Spo153020.73Barchart | Table
Spo022720.73Barchart | Table
Spo259180.73Barchart | Table
Spo037080.73Barchart | Table
Spo005660.73Barchart | Table
Spo176220.73Barchart | Table
Spo119510.73Barchart | Table
Spo155170.72Barchart | Table
Spo061460.72Barchart | Table
Spo137310.72Barchart | Table
Spo085890.71Barchart | Table
Spo075990.71Barchart | Table
Spo272100.71Barchart | Table
Spo169690.71Barchart | Table
Spo236520.70Barchart | Table
Spo244140.70Barchart | Table
Spo194590.70Barchart | Table
Spo181030.70Barchart | Table
Spo033060.70Barchart | Table
Spo273460.70Barchart | Table
Spo072060.70Barchart | Table
Spo004000.69Barchart | Table
Spo019230.69Barchart | Table
Spo096040.69Barchart | Table
Spo109160.69Barchart | Table
Spo123020.69Barchart | Table
Spo129590.69Barchart | Table
Spo187750.69Barchart | Table
Spo215310.69Barchart | Table
Spo269860.69Barchart | Table
Spo271020.69Barchart | Table
Spo181110.68Barchart | Table
Spo075960.68Barchart | Table
Spo020850.68Barchart | Table
Spo171350.68Barchart | Table
Spo223260.68Barchart | Table
Spo206860.68Barchart | Table
Spo128940.68Barchart | Table
Spo079280.68Barchart | Table
Spo025130.67Barchart | Table
Spo117390.67Barchart | Table
Spo176790.67Barchart | Table
Spo066700.67Barchart | Table
Spo201630.67Barchart | Table
Spo048680.67Barchart | Table
Spo218020.67Barchart | Table
Spo225070.67Barchart | Table
Spo232850.67Barchart | Table
Spo248570.67Barchart | Table
Spo266360.67Barchart | Table
Spo273740.67Barchart | Table
Spo169890.67Barchart | Table
Spo249830.66Barchart | Table
Spo171610.66Barchart | Table
Spo188280.66Barchart | Table
Spo192680.66Barchart | Table
Spo181850.66Barchart | Table
Spo269580.66Barchart | Table
Spo213760.66Barchart | Table
Spo233840.66Barchart | Table
Spo038820.66Barchart | Table
Spo036540.66Barchart | Table
Spo208350.66Barchart | Table
Spo058330.66Barchart | Table
Spo008540.66Barchart | Table
Spo209520.65Barchart | Table
Spo171240.65Barchart | Table
Spo220060.65Barchart | Table
Spo005010.65Barchart | Table
Spo271690.65Barchart | Table
Spo145230.65Barchart | Table
Spo170160.65Barchart | Table
Spo198630.65Barchart | Table
Spo134900.65Barchart | Table
Spo268570.65Barchart | Table
Spo203870.65Barchart | Table
Spo104730.65Barchart | Table