Spo27245 (gene)

Overview
NameSpo27245
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionHistone H1 subtype 7
Locationchr5 : 8858115 .. 8859861 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGTGGCACCCACTCATTTCCGTTACGCAATTGCATTCTCTTCTAACTGACGTGCAAAAAATATCTCACACACACACGATCCGTGTCACCCTTTGAAAACCCCAACATCCACCGTTCATTTCTCTCTCATCCTACGGCACACTACCGAACATTTACAAAAATACCCACGATCCGTGTGCTTCCTCCTCCACCAATCAAATCACTCTTTATCCAGTCAATATAAAGTAATCACACTTCTGTCAATTCTCCCCAAAATATTCATTCTGCTTTCTCTTTCCTTCCAATCCGTCTTTCGTACACTTCCGGAAATTCTCTCTCACACTCTCTTTCCTCTTTCTGCGTTTTTACTCAATCTCTGAAGCCATGGCTGCCGCACCTAAAACTGTGAAGAAGGTTACTGCTCCGAAGAAAGCCGCTGCGGCTAAGTCCTCTCCATCTCATCCTCCTTACATCGACGTAAGTATTCTTCACTTTTGATTATTCTTATGAGCTTGATGCGATTTAAAGCTTTTTATGCTGATTATAGATGAGAATATATGCGATTTTCTGTGCTATCGATATGATTTTGTTGACATTCTCGAACTTTTAGGTAGTTTCGTGGTGGTTTGGTTCCTATGAAGTAATATTAGGTTTTCCGATGGTATTTGCTGAAATTTTGTACTATTTTCTGTGATTCCGATCTGTTTATGCTATTATTCGTTGAATTACCGATGTTTCGGTGAATATTTCTTGAAATGGCGTAATTTTAAGCTCAGAATTTATGGACAGTTTTTTCATTTGAAGCTTTAAGGTTATTATTGATGAACTTCTGAGCTATTATTTGTAATTAAGTTTGGATTTGTTAAGTTCTGTTGATGTTTTTTGCATATTACGTATATTCAAATGAAGGTCCGCTGAAATTGATAATTTGCTGGAATTTTATTCACAGATGATTACAGAGGCCTTGGTTTCACTCAAGGAGAGAACCGGATCAAGCCACTACGCAATCGCCAAACACATAGAAGAGCAGCAGAAGGTGAAGGACCTCCCTCCTAACTTCAAGAAGCTTCTGTTCAACCAACTGAAGAAATGCGTCGCATCAGGAAAGCTCGTAATGGTGAAGAAATCCTTCAAACTACCATCTGCCGCGTCGAAGAAGTCTTCATCTCCAGTAGCCGCCCCAGCCGCCGCTGAAAAGGTAAAGGCGAAGCCAAAATCAAAGGAAGTGGCAGAGAAGAAGCCAGCGAAGAAGGAGGCCGCAGCTAAACCTAAGGCTGCGGCAGCGAAACCTAAAGCTGCTGAGAAACCAAAAGCAGCACCGGTGAAGAAACAAAAGGTTGCAGCGAAGTCTCCGGCAAAGAAGGTTGCGCCAGTGAAAGCTAAGAAGTTGAAGAGTATCAAATCGCCGGCGAAGAAAGCTACCGCCGTGAAGAAAACCGTGCCGATGAAGAAGGCTAAGAAGTGAATCAAACGCTGTCGTACTGCTTGATTAGTGCTCGTGAGTTGTAAATTTGTCGATAGGGTTAATGATTGTGGAATAGAGAAGGATGATGATAACTTCTTAGTAGTGGAAAATTTCTAGGGTTTGTAGAAAACTCGACTTAATTACTAGTTTGGTTTGTTTTTGGAATTAGGTTTATGATTAGATTTCCTAATCATTTTACCCAGTTTAGGTTTAATCCTTGTTTTTCTTCTTCAATTTCAATATAAAATTTAAGTTCGCCTAATTTTGATTATGATTTGCTTTGTCTCATTTCCCCAATATTAC

mRNA sequence

AGGTGGCACCCACTCATTTCCGTTACGCAATTGCATTCTCTTCTAACTGACGTGCAAAAAATATCTCACACACACACGATCCGTGTCACCCTTTGAAAACCCCAACATCCACCGTTCATTTCTCTCTCATCCTACGGCACACTACCGAACATTTACAAAAATACCCACGATCCGTGTGCTTCCTCCTCCACCAATCAAATCACTCTTTATCCAGTCAATATAAAGTAATCACACTTCTGTCAATTCTCCCCAAAATATTCATTCTGCTTTCTCTTTCCTTCCAATCCGTCTTTCGTACACTTCCGGAAATTCTCTCTCACACTCTCTTTCCTCTTTCTGCGTTTTTACTCAATCTCTGAAGCCATGGCTGCCGCACCTAAAACTGTGAAGAAGGTTACTGCTCCGAAGAAAGCCGCTGCGGCTAAGTCCTCTCCATCTCATCCTCCTTACATCGACATGATTACAGAGGCCTTGGTTTCACTCAAGGAGAGAACCGGATCAAGCCACTACGCAATCGCCAAACACATAGAAGAGCAGCAGAAGGTGAAGGACCTCCCTCCTAACTTCAAGAAGCTTCTGTTCAACCAACTGAAGAAATGCGTCGCATCAGGAAAGCTCGTAATGGTGAAGAAATCCTTCAAACTACCATCTGCCGCGTCGAAGAAGTCTTCATCTCCAGTAGCCGCCCCAGCCGCCGCTGAAAAGGTAAAGGCGAAGCCAAAATCAAAGGAAGTGGCAGAGAAGAAGCCAGCGAAGAAGGAGGCCGCAGCTAAACCTAAGGCTGCGGCAGCGAAACCTAAAGCTGCTGAGAAACCAAAAGCAGCACCGGTGAAGAAACAAAAGGTTGCAGCGAAGTCTCCGGCAAAGAAGGTTGCGCCAGTGAAAGCTAAGAAGTTGAAGAGTATCAAATCGCCGGCGAAGAAAGCTACCGCCGTGAAGAAAACCGTGCCGATGAAGAAGGCTAAGAAGTGAATCAAACGCTGTCGTACTGCTTGATTAGTGCTCGTGAGTTGTAAATTTGTCGATAGGGTTAATGATTGTGGAATAGAGAAGGATGATGATAACTTCTTAGTAGTGGAAAATTTCTAGGGTTTGTAGAAAACTCGACTTAATTACTAGTTTGGTTTGTTTTTGGAATTAGGTTTATGATTAGATTTCCTAATCATTTTACCCAGTTTAGGTTTAATCCTTGTTTTTCTTCTTCAATTTCAATATAAAATTTAAGTTCGCCTAATTTTGATTATGATTTGCTTTGTCTCATTTCCCCAATATTAC

Coding sequence (CDS)

ATGGCTGCCGCACCTAAAACTGTGAAGAAGGTTACTGCTCCGAAGAAAGCCGCTGCGGCTAAGTCCTCTCCATCTCATCCTCCTTACATCGACATGATTACAGAGGCCTTGGTTTCACTCAAGGAGAGAACCGGATCAAGCCACTACGCAATCGCCAAACACATAGAAGAGCAGCAGAAGGTGAAGGACCTCCCTCCTAACTTCAAGAAGCTTCTGTTCAACCAACTGAAGAAATGCGTCGCATCAGGAAAGCTCGTAATGGTGAAGAAATCCTTCAAACTACCATCTGCCGCGTCGAAGAAGTCTTCATCTCCAGTAGCCGCCCCAGCCGCCGCTGAAAAGGTAAAGGCGAAGCCAAAATCAAAGGAAGTGGCAGAGAAGAAGCCAGCGAAGAAGGAGGCCGCAGCTAAACCTAAGGCTGCGGCAGCGAAACCTAAAGCTGCTGAGAAACCAAAAGCAGCACCGGTGAAGAAACAAAAGGTTGCAGCGAAGTCTCCGGCAAAGAAGGTTGCGCCAGTGAAAGCTAAGAAGTTGAAGAGTATCAAATCGCCGGCGAAGAAAGCTACCGCCGTGAAGAAAACCGTGCCGATGAAGAAGGCTAAGAAGTGA

Protein sequence

MAAAPKTVKKVTAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQKVKDLPPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPKSKEVAEKKPAKKEAAAKPKAAAAKPKAAEKPKAAPVKKQKVAAKSPAKKVAPVKAKKLKSIKSPAKKATAVKKTVPMKKAKK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo27245.1Spo27245.1mRNA


Homology
[Close]
BLAST of Spo27245.1 vs. NCBI nr
Match: gi|902153258|gb|KNA05682.1| (hypothetical protein SOVF_187830 [Spinacia oleracea])

HSP 1 Score: 333.2 bits (853), Expect = 3.200e-88
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1 

		  

Query: 1   MAAAPKTVKKVTAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQK 60
           MAAAPKTVKKVTAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQK
Sbjct: 1   MAAAPKTVKKVTAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQK 60

Query: 61  VKDLPPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPK 120
           VKDLPPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPK
Sbjct: 61  VKDLPPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPK 120

Query: 121 SKEVAEKKPAKKEAAAKPKAAAAKPKAAEKPKAAPVKKQKVAAKSPAKKVAPVKAKKLKS 180
           SKEVAEKKPAKKEAAAKPKAAAAKPKAAEKPKAAPVKKQKVAAKSPAKKVAPVKAKKLKS
Sbjct: 121 SKEVAEKKPAKKEAAAKPKAAAAKPKAAEKPKAAPVKKQKVAAKSPAKKVAPVKAKKLKS 180

Query: 181 IKSPAKKATAVKKTVPMKKAKK 203
           IKSPAKKATAVKKTVPMKKAKK
Sbjct: 181 IKSPAKKATAVKKTVPMKKAKK 202
[Close]
BLAST of Spo27245.1 vs. NCBI nr
Match: gi|731335239|ref|XP_010678630.1| (PREDICTED: histone H1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 197.2 bits (500), Expect = 2.700e-47
Identity = 147/212 (69.34%), Postives = 156/212 (73.58%), Query Frame = 1 

		  

Query: 1   MAAAPKTVKKVTAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQK 60
           +A A K+VKK +A  K  + KS+ SHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQK
Sbjct: 3   VAQATKSVKKASANTKKPS-KSTSSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQK 62

Query: 61  VKDLPPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPK 120
           V+DLP NFKKLLFNQLKK VASGKLVMVKKSFKLPS  SKK  SPV AP A    K KPK
Sbjct: 63  VRDLPSNFKKLLFNQLKKGVASGKLVMVKKSFKLPSGTSKK--SPVTAPVAE---KPKPK 122

Query: 121 SKEVAEKKPAKKEAAAKPKAAAAKPKAAEKPKAAPVKKQKVAAKSPAKKVAPVK------ 180
           SKEVA KKPAK          AAKPK A+K K A VK     AKSPAKK+AP K      
Sbjct: 123 SKEVAAKKPAK-------TVVAAKPKTAKKQKIA-VKVAVKVAKSPAKKIAPAKAKKPKS 182

Query: 181 ----AKKLKSIKSPAKKATAVKKTVPMKKAKK 203
               AKK+KSIKSPAKKATAVKKT  MKK KK
Sbjct: 183 IKSPAKKMKSIKSPAKKATAVKKTTAMKKTKK 200
[Close]
BLAST of Spo27245.1 vs. NCBI nr
Match: gi|720071648|ref|XP_010278122.1| (PREDICTED: histone H1-like [Nelumbo nucifera])

HSP 1 Score: 137.5 bits (345), Expect = 2.600e-29
Identity = 120/215 (55.81%), Postives = 136/215 (63.26%), Query Frame = 1 

		  

Query: 2   AAAPKT--VKKVTAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQ 61
           A APK    KKV +PKK    ++ PSHPPYI+MI EA+VSLKERTGSS YAI K IE++Q
Sbjct: 37  AKAPKESKAKKVASPKKP---RNPPSHPPYIEMIKEAIVSLKERTGSSQYAITKFIEDKQ 96

Query: 62  KVKDLPPNFKKLLFNQLKKCVASGKLVMVKKSFKLP-------SAASKKSSSPVAAPAAA 121
           K   LPPNFKKLL   LKK VA+GKLV VK S+KLP        AA K +S+P A   AA
Sbjct: 97  K-SHLPPNFKKLLLFHLKKLVAAGKLVKVKNSYKLPPSRPAAAPAAKKPASAPAAKKPAA 156

Query: 122 EKVKAKPKSKEVAEKKP-AKKEAAAKPKAAAAKPKAAEKPKAAPVKKQKVAAKSPAKKVA 181
            K KA  K K  A+ KP AK +AAAKPKAA  KPKAA KPKAA   K+K AAK   K   
Sbjct: 157 AKPKASAKPKAAAKPKPAAKPKAAAKPKAAPVKPKAAAKPKAA--AKRKPAAKPKPKTAR 216

Query: 182 PVKAKKLKSIKSPAKKATAVK----KTVPMKKAKK 203
           P KA K  +  +P KKA A K    K  P K  KK
Sbjct: 217 PAKAAKTSTKSTPGKKAPAAKPAAAKKTPTKNVKK 245
[Close]
BLAST of Spo27245.1 vs. NCBI nr
Match: gi|528065930|emb|CCP19589.1| (histone H1 subtype 7 [Pisum sativum subsp. elatius])

HSP 1 Score: 132.1 bits (331), Expect = 1.100e-27
Identity = 113/192 (58.85%), Postives = 129/192 (67.19%), Query Frame = 1 

		  

Query: 12  TAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQKVKDLPPNFKKL 71
           T PKK AAAK   SHP + +MITEA+ SLKERTGSS YAI K IEE  K KDLPP ++KL
Sbjct: 7   TKPKKTAAAKKPLSHPTFAEMITEAITSLKERTGSSQYAITKFIEE--KHKDLPPTYRKL 66

Query: 72  LFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPKSKEVAEKKPAK 131
           +   LKK VASGKLV VK SFKL  AA+K +S+  +A   A K   KP +K V   KP K
Sbjct: 67  VLLHLKKSVASGKLVKVKSSFKLAPAAAKTASAKTSAATKAPKAVTKPSAKAVT--KP-K 126

Query: 132 KEAAAKPKA-AAAKPKAAEKPKAAPVKKQKVAAKSPAKKVAPVKAKKLKSIKSPAKKATA 191
            +AA KPKA AAAKPKA  KPKA  VK   V  K+ AKKV     KK KS+KSPAKK  +
Sbjct: 127 AKAAVKPKAKAAAKPKAVAKPKAKSVKATPV-KKAVAKKV----VKKAKSVKSPAKKVKS 186

Query: 192 VKKTVPMKKAKK 203
           VK   P+KKAKK
Sbjct: 187 VK--TPVKKAKK 186
[Close]
BLAST of Spo27245.1 vs. NCBI nr
Match: gi|528066020|emb|CCP19634.1| (histone H1 subtype 7 [Pisum fulvum])

HSP 1 Score: 131.7 bits (330), Expect = 1.400e-27
Identity = 113/192 (58.85%), Postives = 129/192 (67.19%), Query Frame = 1 

		  

Query: 12  TAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQKVKDLPPNFKKL 71
           T PKK AAAK   SHP + +MITEA+ SLKERTGSS YAI K IEE  K KDLPP ++KL
Sbjct: 7   TKPKKTAAAKKPLSHPTFAEMITEAITSLKERTGSSQYAITKFIEE--KHKDLPPTYRKL 66

Query: 72  LFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPKSKEVAEKKPAK 131
           +   LKK VASGKLV VK SFKL  AA+K + +  +A   A K  AKP +K V   KP K
Sbjct: 67  VLLHLKKSVASGKLVKVKSSFKLAPAAAKTAPAKTSAATKAPKAVAKPSTKAVT--KP-K 126

Query: 132 KEAAAKPKA-AAAKPKAAEKPKAAPVKKQKVAAKSPAKKVAPVKAKKLKSIKSPAKKATA 191
            +AA KPKA AAAKPKA  KPKA  VK   V  K+ AKKV     KK KS+KSPAKK  +
Sbjct: 127 TKAAVKPKAKAAAKPKAVAKPKAKSVKATPV-KKAVAKKV----VKKAKSVKSPAKKVKS 186

Query: 192 VKKTVPMKKAKK 203
           VK   P+KKAKK
Sbjct: 187 VK--TPVKKAKK 186
[Close]
BLAST of Spo27245.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEJ4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_187830 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 2.200e-88
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1 

		  

Query: 1   MAAAPKTVKKVTAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQK 60
           MAAAPKTVKKVTAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQK
Sbjct: 1   MAAAPKTVKKVTAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQK 60

Query: 61  VKDLPPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPK 120
           VKDLPPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPK
Sbjct: 61  VKDLPPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPK 120

Query: 121 SKEVAEKKPAKKEAAAKPKAAAAKPKAAEKPKAAPVKKQKVAAKSPAKKVAPVKAKKLKS 180
           SKEVAEKKPAKKEAAAKPKAAAAKPKAAEKPKAAPVKKQKVAAKSPAKKVAPVKAKKLKS
Sbjct: 121 SKEVAEKKPAKKEAAAKPKAAAAKPKAAEKPKAAPVKKQKVAAKSPAKKVAPVKAKKLKS 180

Query: 181 IKSPAKKATAVKKTVPMKKAKK 203
           IKSPAKKATAVKKTVPMKKAKK
Sbjct: 181 IKSPAKKATAVKKTVPMKKAKK 202
[Close]
BLAST of Spo27245.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F3W3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115670 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.900e-47
Identity = 147/212 (69.34%), Postives = 156/212 (73.58%), Query Frame = 1 

		  

Query: 1   MAAAPKTVKKVTAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQK 60
           +A A K+VKK +A  K  + KS+ SHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQK
Sbjct: 3   VAQATKSVKKASANTKKPS-KSTSSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQK 62

Query: 61  VKDLPPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPK 120
           V+DLP NFKKLLFNQLKK VASGKLVMVKKSFKLPS  SKK  SPV AP A    K KPK
Sbjct: 63  VRDLPSNFKKLLFNQLKKGVASGKLVMVKKSFKLPSGTSKK--SPVTAPVAE---KPKPK 122

Query: 121 SKEVAEKKPAKKEAAAKPKAAAAKPKAAEKPKAAPVKKQKVAAKSPAKKVAPVK------ 180
           SKEVA KKPAK          AAKPK A+K K A VK     AKSPAKK+AP K      
Sbjct: 123 SKEVAAKKPAK-------TVVAAKPKTAKKQKIA-VKVAVKVAKSPAKKIAPAKAKKPKS 182

Query: 181 ----AKKLKSIKSPAKKATAVKKTVPMKKAKK 203
               AKK+KSIKSPAKKATAVKKT  MKK KK
Sbjct: 183 IKSPAKKMKSIKSPAKKATAVKKTTAMKKTKK 200
[Close]
BLAST of Spo27245.1 vs. UniProtKB/TrEMBL
Match: S6CRT3_PEA (Histone H1 subtype 7 OS=Pisum sativum subsp. elatius GN=his7 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.500e-28
Identity = 113/192 (58.85%), Postives = 129/192 (67.19%), Query Frame = 1 

		  

Query: 12  TAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQKVKDLPPNFKKL 71
           T PKK AAAK   SHP + +MITEA+ SLKERTGSS YAI K IEE  K KDLPP ++KL
Sbjct: 7   TKPKKTAAAKKPLSHPTFAEMITEAITSLKERTGSSQYAITKFIEE--KHKDLPPTYRKL 66

Query: 72  LFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPKSKEVAEKKPAK 131
           +   LKK VASGKLV VK SFKL  AA+K +S+  +A   A K   KP +K V   KP K
Sbjct: 67  VLLHLKKSVASGKLVKVKSSFKLAPAAAKTASAKTSAATKAPKAVTKPSAKAVT--KP-K 126

Query: 132 KEAAAKPKA-AAAKPKAAEKPKAAPVKKQKVAAKSPAKKVAPVKAKKLKSIKSPAKKATA 191
            +AA KPKA AAAKPKA  KPKA  VK   V  K+ AKKV     KK KS+KSPAKK  +
Sbjct: 127 AKAAVKPKAKAAAKPKAVAKPKAKSVKATPV-KKAVAKKV----VKKAKSVKSPAKKVKS 186

Query: 192 VKKTVPMKKAKK 203
           VK   P+KKAKK
Sbjct: 187 VK--TPVKKAKK 186
[Close]
BLAST of Spo27245.1 vs. UniProtKB/TrEMBL
Match: S6CRT4_9FABA (His7 protein OS=Pisum fulvum GN=his7 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.900e-28
Identity = 113/192 (58.85%), Postives = 129/192 (67.19%), Query Frame = 1 

		  

Query: 12  TAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQKVKDLPPNFKKL 71
           T PKK AAAK   SHP + +MITEA+ SLKERTGSS YAI K IEE  K KDLPP ++KL
Sbjct: 7   TKPKKTAAAKKPLSHPTFAEMITEAITSLKERTGSSQYAITKFIEE--KHKDLPPTYRKL 66

Query: 72  LFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPKSKEVAEKKPAK 131
           +   LKK VASGKLV VK SFKL  AA+K + +  +A   A K  AKP +K V   KP K
Sbjct: 67  VLLHLKKSVASGKLVKVKSSFKLAPAAAKTAPAKTSAATKAPKAVAKPSAKAVT--KP-K 126

Query: 132 KEAAAKPKA-AAAKPKAAEKPKAAPVKKQKVAAKSPAKKVAPVKAKKLKSIKSPAKKATA 191
            +AA KPKA AAAKPKA  KPKA  VK   V  K+ AKKV     KK KS+KSPAKK  +
Sbjct: 127 AKAAVKPKAKAAAKPKAVAKPKAKSVKATPV-KKAVAKKV----VKKAKSVKSPAKKVKS 186

Query: 192 VKKTVPMKKAKK 203
           VK   P+KKAKK
Sbjct: 187 VK--TPVKKAKK 186
[Close]
BLAST of Spo27245.1 vs. UniProtKB/TrEMBL
Match: S6CRT8_PEA (His7 protein OS=Pisum sativum subsp. elatius GN=his7 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.900e-28
Identity = 113/192 (58.85%), Postives = 129/192 (67.19%), Query Frame = 1 

		  

Query: 12  TAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQKVKDLPPNFKKL 71
           T PKK AAAK   SHP + +MITEA+ SLKERTGSS YAI K IEE  K KDLPP ++KL
Sbjct: 7   TKPKKTAAAKKPLSHPTFAEMITEAITSLKERTGSSQYAITKFIEE--KHKDLPPTYRKL 66

Query: 72  LFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPKSKEVAEKKPAK 131
           +   LKK VASGKLV VK SFKL  AA+K + +  +A   A K  AKP +K V   KP K
Sbjct: 67  VLLHLKKSVASGKLVKVKSSFKLAPAAAKTAPAKTSAATKAPKAVAKPSAKAVT--KP-K 126

Query: 132 KEAAAKPKA-AAAKPKAAEKPKAAPVKKQKVAAKSPAKKVAPVKAKKLKSIKSPAKKATA 191
            +AA KPKA AAAKPKA  KPKA  VK   V  K+ AKKV     KK KS+KSPAKK  +
Sbjct: 127 AKAAVKPKAKAAAKPKAVAKPKAKSVKATPV-KKAVAKKV----VKKAKSVKSPAKKVKS 186

Query: 192 VKKTVPMKKAKK 203
           VK   P+KKAKK
Sbjct: 187 VK--TPVKKAKK 186
[Close]
BLAST of Spo27245.1 vs. ExPASy Swiss-Prot
Match: H1_MAIZE (Histone H1 OS=Zea mays PE=2 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 1.700e-25
Identity = 109/204 (53.43%), Postives = 127/204 (62.25%), Query Frame = 1 

		  

Query: 9   KKVTAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQKVKDLPPNF 68
           KK TAPKK A    SP+H PY +M++EA+ SLKERTGSS YAIAK +E++ K K LPPNF
Sbjct: 37  KKATAPKKRA----SPTHLPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAK-LPPNF 96

Query: 69  KKLLFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAP------AAAEKVKAKPKSK 128
           +KLL  QLKK VA GKL  VK S+KL S+A+K +  P AAP      A   K  AKPK+K
Sbjct: 97  RKLLNVQLKKLVAGGKLTKVKNSYKL-SSATKPNPKPKAAPKKPKTGAKKPKAAAKPKAK 156

Query: 129 EVAEKKPAKK-EAAAKPKAAAAKPKAAEKPKAAPVKKQK--VAAKSP---AKKVAPVKAK 188
             A+ KPA K + AAKPKA   KPK   KPKA P  K K   A   P   AKK    KA 
Sbjct: 157 TPAKAKPATKPKPAAKPKAVV-KPKTPAKPKAKPAAKAKPKTAGAKPKPLAKKAGRAKAA 216

Query: 189 KLKSIKSPAKKATAVKKTVPMKKA 201
           K  +  +P KKA A KK  P KKA
Sbjct: 217 KTSAKDTPGKKAPA-KKAAPSKKA 232
[Close]
BLAST of Spo27245.1 vs. ExPASy Swiss-Prot
Match: H1_PEA (Histone H1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.700e-23
Identity = 113/224 (50.45%), Postives = 132/224 (58.93%), Query Frame = 1 

		  

Query: 2   AAAPKTVK-KVTAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQK 61
           A   KT K K + PKKA+  ++  SHP Y +MI +A+VSLKE+ GSS YAIAK IEE+QK
Sbjct: 37  AEVEKTKKAKGSKPKKASKPRNPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQK 96

Query: 62  VKDLPPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSAASK----KSSSPVAAPAAAEKVK 121
              LP NFKKLL   LKK VASGKL+ VK SFKL +AA K    K  +  AA A + K K
Sbjct: 97  --QLPANFKKLLLQNLKKNVASGKLIKVKGSFKLSAAAKKPAVAKPKAKTAAKAKSVKAK 156

Query: 122 --AKPKSKEVAEKKPAKKE--AAAKPKAAAAKPKA--------AEKPKA-----APVKKQ 181
             AKPK+K V + K A K    AAKPK AAAKPK         A KPKA     + VK  
Sbjct: 157 PAAKPKAKAVVKPKVASKAKAVAAKPKKAAAKPKTVAAKTKPTAAKPKAVVKPKSKVKPA 216

Query: 182 KVAAKS----PAKKVA----------PVKAKKLKSIKSPAKKAT 190
           KVA  S    P KKVA          PVK+ K KS+KSP KK +
Sbjct: 217 KVAKTSVKTTPGKKVAAVKKVAAKKVPVKSVKAKSVKSPVKKVS 258
[Close]
BLAST of Spo27245.1 vs. ExPASy Swiss-Prot
Match: H11_ARATH (Histone H1.1 OS=Arabidopsis thaliana GN=At1g06760 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.000e-22
Identity = 105/214 (49.07%), Postives = 124/214 (57.94%), Query Frame = 1 

		  

Query: 6   KTVKKVTAPKKAAAA---KSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQKVK 65
           K VK+V   K  AAA   ++  SHP Y +MI +A+V+LKERTGSS YAI K IEE++K  
Sbjct: 39  KNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRK-- 98

Query: 66  DLPPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPKS- 125
           +LPP F+KLL   LK+ VASGKLV VK SFKLPS AS K+SSP AA   +   K KP + 
Sbjct: 99  ELPPTFRKLLLLNLKRLVASGKLVKVKASFKLPS-ASAKASSPKAAAEKSAPAKKKPATV 158

Query: 126 ------KEVAEKKPAKKEAAAKPKAAAAKPKAAEKPKAAPV-------KKQKVAAKSPAK 185
                 ++VA    AKK  A KPK AAAK K   K KA PV        K+K     P  
Sbjct: 159 AVTKAKRKVAAASKAKKTIAVKPKTAAAK-KVTAKAKAKPVPRATAAATKRKAVDAKPKA 218

Query: 186 KVAPVKAKKLKSIKSPAKKATAVKKTVPMKKAKK 203
           K  P KA K   + SPAKKA A  K V     KK
Sbjct: 219 KARPAKAAKTAKVTSPAKKAVAATKKVATVATKK 248
[Close]
BLAST of Spo27245.1 vs. ExPASy Swiss-Prot
Match: H1_SOLLC (Histone H1 OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.000e-22
Identity = 119/243 (48.97%), Postives = 136/243 (55.97%), Query Frame = 1 

		  

Query: 2   AAAPKTVKKVTAPKKAAAAKSS--PSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQ 61
           A + K  K+  A K AA  K S  P+HPPY +MI +A+V+LKERTGSS +AI K IEE+Q
Sbjct: 30  AKSGKAKKETKAKKPAAPRKRSATPTHPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQ 89

Query: 62  KVKDLPPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSA---------ASKK----SSSPV 121
           K   LP NFKKLL  QLKK VAS KLV VK S+KLPS          A KK     S P 
Sbjct: 90  K--SLPSNFKKLLLTQLKKFVASEKLVKVKNSYKLPSGSKPAAAAVPAKKKPAAAKSKPA 149

Query: 122 AAPAAAEKVKAKP--KSKEVAEKKPAKKE---------------------AAAKPKAAAA 181
           A P AA K KAKP  K+K  A+ KPA K                      A AKPKAAAA
Sbjct: 150 AKPKAAVKPKAKPAAKAKPAAKAKPAAKAKPAAKAKPAAKAKPAAKAKPVAKAKPKAAAA 209

Query: 182 -KPKAAEKPKAAPVK-----KQKVAAKSPAKKVAPVKAKKLKSIKSPAKKATAVKKTVPM 201
            KPKAA KPKAAP K     K  + AK+   KVA    +   S K+ A KAT  KK  P+
Sbjct: 210 AKPKAAVKPKAAPAKTKAAVKPNLKAKTTTAKVAKTATRTTPSRKA-APKATPAKKE-PV 268
[Close]
BLAST of Spo27245.1 vs. ExPASy Swiss-Prot
Match: H1_EUPES (Histone H1 OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.200e-21
Identity = 100/201 (49.75%), Postives = 122/201 (60.70%), Query Frame = 1 

		  

Query: 5   PKTVKKVTAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQKVKDL 64
           PK  KKV A KK  + K + SHP + +MI++A+ +LKERTGSS YAI K +E+  K K L
Sbjct: 31  PKEKKKVIAAKKPKS-KGTSSHPSFFEMISDAISTLKERTGSSQYAINKFVED--KHKQL 90

Query: 65  PPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAE-KVKAKPKSKE 124
           P NF+KLL   LKK VASGKLV VK SFKLPSA +  + +    P   + KV AKPK+ +
Sbjct: 91  PSNFRKLLLFHLKKLVASGKLVKVKNSFKLPSARAAPAPALAKKPTIPKPKVAAKPKTAK 150

Query: 125 VAEKKPAKKEAAAKPKAA---------AAKPKA--AEKPKAAPVKKQKV----AAKSPAK 184
           +  K  AK + AAK KA          AAKPKA  A KPK    K  KV    A  SP K
Sbjct: 151 IGAKPKAKAKVAAKTKATTKTVAKKIPAAKPKAKTAGKPKTVAAKPAKVAKTAAVASPGK 210

Query: 185 KVAPVKAKKLKSIKSPAKKAT 190
           K A V  KK+K++KSPA K T
Sbjct: 211 KKA-VPVKKVKTVKSPAGKRT 227
[Close]
BLAST of Spo27245.1 vs. TAIR (Arabidopsis)
Match: AT1G06760.1 (winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 108.2 bits (269), Expect = 5.900e-24
Identity = 105/214 (49.07%), Postives = 124/214 (57.94%), Query Frame = 1 

		  

Query: 6   KTVKKVTAPKKAAAA---KSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQKVK 65
           K VK+V   K  AAA   ++  SHP Y +MI +A+V+LKERTGSS YAI K IEE++K  
Sbjct: 39  KNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRK-- 98

Query: 66  DLPPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPKS- 125
           +LPP F+KLL   LK+ VASGKLV VK SFKLPS AS K+SSP AA   +   K KP + 
Sbjct: 99  ELPPTFRKLLLLNLKRLVASGKLVKVKASFKLPS-ASAKASSPKAAAEKSAPAKKKPATV 158

Query: 126 ------KEVAEKKPAKKEAAAKPKAAAAKPKAAEKPKAAPV-------KKQKVAAKSPAK 185
                 ++VA    AKK  A KPK AAAK K   K KA PV        K+K     P  
Sbjct: 159 AVTKAKRKVAAASKAKKTIAVKPKTAAAK-KVTAKAKAKPVPRATAAATKRKAVDAKPKA 218

Query: 186 KVAPVKAKKLKSIKSPAKKATAVKKTVPMKKAKK 203
           K  P KA K   + SPAKKA A  K V     KK
Sbjct: 219 KARPAKAAKTAKVTSPAKKAVAATKKVATVATKK 248
[Close]
BLAST of Spo27245.1 vs. TAIR (Arabidopsis)
Match: AT2G30620.1 (winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 97.1 bits (240), Expect = 1.400e-20
Identity = 103/213 (48.36%), Postives = 118/213 (55.40%), Query Frame = 1 

		  

Query: 7   TVKKVTAPKKAAAA---KSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQKVKD 66
           T K    P KAAA    K++ SHP Y +MI +A+V+LKERTGSS YAI K IEE  K K 
Sbjct: 40  TAKATKKPVKAAAPTKKKTTSSHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEE--KHKS 99

Query: 67  LPPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPKSKE 126
           LPP F+KLL   LK+ VAS KLV VK SFK+PSA S  +  P A       V AKPK K 
Sbjct: 100 LPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKV 159

Query: 127 VAEKKPAKKEAAAK--PKAAA---AKPKAAEKPK----AAPVKKQKVAAKSPAKKVA--- 186
            A   PAK +AAAK   K AA   AK K   KPK    AA  K + VAA S  K VA   
Sbjct: 160 AAAVAPAKAKAAAKGTKKPAAKVVAKAKVTAKPKAKVTAAKPKSKSVAAVSKTKAVAAKP 219

Query: 187 -----PVKAKKLKSIKSPAKKATAVKKTVPMKK 200
                P KA +  +  SP KK  A  K V + K
Sbjct: 220 KAKERPAKASRTSTRTSPGKKVAAPAKKVAVTK 250
[Close]
BLAST of Spo27245.1 vs. TAIR (Arabidopsis)
Match: AT2G18050.1 (histone H1-3)

HSP 1 Score: 58.5 bits (140), Expect = 5.400e-9
Identity = 71/190 (37.37%), Postives = 96/190 (50.53%), Query Frame = 1 

		  

Query: 3   AAPKTVKKVTAPKKAAAAKSSPSHPPYIDMITEALVSLKERTGSSHYAIAKHIEEQQKVK 62
           A  K +KK  A KK    K++ +HPPY  MI EAL+ LKE+ GSS YAIAK IEE+ K  
Sbjct: 2   AEDKILKKTPAAKKPRKPKTT-THPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHK-S 61

Query: 63  DLPPNFKKLLFNQLKKCVASGKLVMVKKSFKLPSAASKKSSSPVAAPAAAEKVKAKPKSK 122
            LP +F+K L  QLK  VA GKLV ++ S+KL                  + +  +   K
Sbjct: 62  LLPESFRKTLSLQLKNSVAKGKLVKIRASYKLSD--------------TTKMITRQQDKK 121

Query: 123 EVAEKKPAKKEAAAKPKAAAAKPKAAEKPKAAPVKKQKVAAKSPAKKVAPVKAKKLKSIK 182
                K   KE   + ++++ +PK     K   V KQ+       KK    KA++ KSIK
Sbjct: 122 NKKNMKQEDKEITKRTRSSSTRPK-----KTVSVNKQE-------KKRKVKKARQPKSIK 163

Query: 183 SPAKKATAVK 193
           S   K  A+K
Sbjct: 182 SSVGKKKAMK 163
The following BLAST results are available for this feature:
BLAST of Spo27245.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902153258|gb|KNA05682.1|3.2e-88100.hypothetical protein SOVF_1878... [more]
gi|731335239|ref|XP_010678630.1|2.7e-4769.3PREDICTED: histone H1-like [Be... [more]
gi|720071648|ref|XP_010278122.1|2.6e-2955.8PREDICTED: histone H1-like [Ne... [more]
gi|528065930|emb|CCP19589.1|1.1e-2758.8histone H1 subtype 7 [Pisum sa... [more]
gi|528066020|emb|CCP19634.1|1.4e-2758.8histone H1 subtype 7 [Pisum fu... [more]
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BLAST of Spo27245.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QEJ4_SPIOL2.2e-88100.Uncharacterized protein OS=Spi... [more]
A0A0J8F3W3_BETVU1.9e-4769.3Uncharacterized protein OS=Bet... [more]
S6CRT3_PEA7.5e-2858.8Histone H1 subtype 7 OS=Pisum ... [more]
S6CRT4_9FABA9.9e-2858.8His7 protein OS=Pisum fulvum G... [more]
S6CRT8_PEA9.9e-2858.8His7 protein OS=Pisum sativum ... [more]
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BLAST of Spo27245.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
H1_MAIZE1.7e-2553.4Histone H1 OS=Zea mays PE=2 SV... [more]
H1_PEA4.7e-2350.4Histone H1 OS=Pisum sativum PE... [more]
H11_ARATH1.0e-2249.0Histone H1.1 OS=Arabidopsis th... [more]
H1_SOLLC1.0e-2248.9Histone H1 OS=Solanum lycopers... [more]
H1_EUPES1.2e-2149.7Histone H1 OS=Euphorbia esula ... [more]
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BLAST of Spo27245.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT1G06760.15.9e-2449.0winged-helix DNA-binding trans... [more]
AT2G30620.11.4e-2048.3winged-helix DNA-binding trans... [more]
AT2G18050.15.4e-937.3histone H1-3[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 26..94
score: 3.4
IPR005818Linker histone H1/H5, domain H15SMARTSM00526h15plus2coord: 23..91
score: 1.2
IPR005818Linker histone H1/H5, domain H15PROFILEPS51504H15coord: 25..96
score: 31
IPR005819Histone H5PRINTSPR00624HISTONEH5coord: 39..56
score: 5.8E-14coord: 173..192
score: 5.8E-14coord: 121..135
score: 5.8E-14coord: 12..33
score: 5.8E-14coord: 151..168
score: 5.8
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 21..101
score: 4.3
IPR011991Winged helix-turn-helix DNA-binding domainunknownSSF46785"Winged helix" DNA-binding domaincoord: 22..103
score: 1.8
NoneNo IPR availablePANTHERPTHR11467HISTONE H1/H5coord: 2..200
score: 2.0
NoneNo IPR availablePANTHERPTHR11467:SF48HISTONE H1.1-RELATEDcoord: 2..200
score: 2.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
biological_process GO:0030865 cortical cytoskeleton organization
biological_process GO:0006342 chromatin silencing
biological_process GO:0009653 anatomical structure morphogenesis
biological_process GO:0060255 regulation of macromolecule metabolic process
biological_process GO:0050794 regulation of cellular process
biological_process GO:0043414 macromolecule methylation
biological_process GO:0006260 DNA replication
biological_process GO:0009987 cellular process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0009652 thigmotropism
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0016572 histone phosphorylation
biological_process GO:0051301 cell division
biological_process GO:0031047 gene silencing by RNA
biological_process GO:0007131 reciprocal meiotic recombination
biological_process GO:0006281 DNA repair
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0051225 spindle assembly
biological_process GO:0010583 response to cyclopentenone
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0006084 acetyl-CoA metabolic process
biological_process GO:0034645 cellular macromolecule biosynthetic process
biological_process GO:0032259 methylation
biological_process GO:0052546 cell wall pectin metabolic process
biological_process GO:0009908 flower development
biological_process GO:0016570 histone modification
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0007030 Golgi organization
biological_process GO:0006833 water transport
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0009651 response to salt stress
biological_process GO:0051788 response to misfolded protein
biological_process GO:0046686 response to cadmium ion
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0006457 protein folding
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009853 photorespiration
biological_process GO:0006972 hyperosmotic response
biological_process GO:0009414 response to water deprivation
biological_process GO:0048507 meristem development
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0010051 xylem and phloem pattern formation
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0048519 negative regulation of biological process
biological_process GO:0048439 flower morphogenesis
biological_process GO:0006270 DNA replication initiation
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0009887 animal organ morphogenesis
biological_process GO:0007094 mitotic spindle assembly checkpoint
biological_process GO:0009630 gravitropism
biological_process GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0090304 nucleic acid metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006349 regulation of gene expression by genetic imprinting
biological_process GO:0010389 regulation of G2/M transition of mitotic cell cycle
biological_process GO:0006275 regulation of DNA replication
biological_process GO:0045787 positive regulation of cell cycle
biological_process GO:0009555 pollen development
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0016573 histone acetylation
biological_process GO:0031507 heterochromatin assembly
biological_process GO:0048449 floral organ formation
biological_process GO:0008283 cell proliferation
biological_process GO:0010026 trichome differentiation
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0008152 metabolic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006996 organelle organization
biological_process GO:0010214 seed coat development
biological_process GO:0009909 regulation of flower development
biological_process GO:0006810 transport
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0009536 plastid
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005829 cytosol
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005768 endosome
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009579 thylakoid
cellular_component GO:0016020 membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
cellular_component GO:0005730 nucleolus
cellular_component GO:0005665 DNA-directed RNA polymerase II, core complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0045254 pyruvate dehydrogenase complex
cellular_component GO:0005635 nuclear envelope
cellular_component GO:0005874 microtubule
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005618 cell wall
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005819 spindle
cellular_component GO:0045298 tubulin complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0012505 endomembrane system
cellular_component GO:0005677 chromatin silencing complex
cellular_component GO:0009504 cell plate
cellular_component GO:0000785 chromatin
cellular_component GO:0000786 nucleosome
cellular_component GO:0009524 phragmoplast
molecular_function GO:0019843 rRNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0008094 DNA-dependent ATPase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0019901 protein kinase binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0008017 microtubule binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
RNA-Seq Expression