Spo26957 (gene)

Overview
NameSpo26957
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionATP-dependent clp protease ATP binding subunit
Locationchr6 : 32626669 .. 32634946 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAATCAAAACCCAAGATCAAACCCGGTCTGTATCAGAAATAACGGTGACGTATAGTATCGTTTTCAGTAAGGAAGGCAGAAGTGAGAAGACCAATCCACAATCACCCCCACACTCTGTGAAGTCTTCTCCAACCTTCAACAATGGCTGCCAATGCTCACTCTCTCTCCAGAATACACTTACAGTTCCCTGAATTCAGAACATCTATCAACTCATCACAACGTATTTCGTCGCCTTTCATTTCCCTCAATTCACAGAATCCATTTCTGGGTAATCTTACACTCTCTCTCCTCCACCCTTCTTCAACAAGAACAACTCATGCACTCTCAATTACAACCAAACGACACCCTGTTTCTTCCGCCGTCTCTTTTAGTCTCCCAACTGGGTAAGATTCTGTATTACCCATTTCTTTAATTTTGAAAAAATACCCTTTCTTATTTTAAGGGTTTTGATTTTAATTTCTGTGTTTGGCAGGATCCCGGATAGGGTTGTTGGTGATAAAATTCCCAAGTGAGTTGAAATTTGCATATTTATTGATTAATTTTAAAGTTTGATTTCATGGGGTTTTGTGTTGATTGGGATTTTGTTGATGGGTTGGGAAATGAATTGAAGCAGGTGGTCAGGGAGGGCAATTAAATCATTTGCTATGAGTGAATTGGAAGCTAGGAAGCTCAAGTACCCTACAACTGGGACTGAAGCCCTTCTTATGGGACTTCTTATAGAAGGTTAGTCTTGTGAACCTTGATGAAGGGGGCATAATTCAGTATATGAAAATGTTATTTTGGTTATTGTTTCGAATTTTGAGTTATACTATTACTTACTATGTATGTTGCTCAGTTGAACACATCATGCTCGTTGCTGTCAATATGGCAATTACTGAATTTGCATTGAGTTCATGTTCTCCTTAAAGCTAGTTTAAGATGAATTAATATTATGATTTCGCTGGCTATTTGATTTGAATATCATCGTTGTATTGATCTCTCGAAAAGAGCCTAGCTTCTTTTTTTTATTGGGGGTGAAAATTTGAACATTTGGACTTAACTTGCCAAATGCAAATAAGAGAATCTGTATTGGATGGTGTTTGTTGCCGAATTCAAGTTCTGTGAGAGACCAAGGGTTGTTTATACGCGTGGTTAAGGTTTTTCTGCATTGTTTATGTGTTAATGTCTTTAAGGACCTTTCATGTGTGTCCTTGTAGGAGGTTAGGCTATCAAATCGTTTGCCTCTTCATCCTTCTAAAACCAGGATTACTAAATTAAGCTTTACTATTTGAACTCATTCTTTGTTTTCAGATTGCGTAAAAGGTGTCTCTTACATTTGAACTTGTGAGTACTACAAAGATGCAAGTTAAATTTGTGTGTGCTACTGGTCACTATTACCTTTCTTGCTAGTTTGATTAAATCATTAGAATGTCACTCCTTTGTTAAACTTGCTTATATTGGGACTTACTTTTAGCTTGAAGTTTATAGATAAGTGAATTAATGAGTAAGGAACATAATAACGATATTGCTTTGTGGGGATTATGTATGTGTTAAACAATATAAAGTTTGTCAAGTTGCTTAGGCTCAGCGAAAAAGAAGATGTCATTAATAAGAGCTCATATAATTTTATTTCGTAAAAGTCAAAAGCTATTATAGGCATTTTTAAGGGAATGTGTAGTCAAGGGTAACAGAAGTGAGAAATTTAGATTTTAGACTCAAATTCTATGTCCTGCATCAAAAAGGCTGAAGAACCGAAGTTGAGTGCTTGTTGTTGAAGTTGACAATATAGAGATGTGGAAGAACGCTTACATAAGTCTTACGGTGAAATTAGACAACTTGACACTAGTATACTTTATCTCATTGTATCAGTTTCAATAGAAGAAACTAAGGAAACTGTGTGAAAGCAAACAGAAGCACGAAAATCCCTAGGATATGAAGTGTTAGCATATTTAGCTTATTAATGTCATGAGTAAGGCTAGATGACTAATTACTAGCCACCTAACAATAAACAAAATAATCCAAAAGTCAGTTATTGTCAATTTAACTCGTGTTTTATAGATTTAAGGAAATTATGAATCTCCTAATTGCCCCTTTGATAGGCGGTAGAAAAAGATGACAGTGTTAATGAATTTGTATTGTATATTTGTGAGAAAAGTCATATATTAATGCCCATGATAATGCTACTTCACCCTATTATGTCATTTCTTTATAAATCTTCATTACCATCGATTATCACTTGGTGAGTGGTAGTGGATGAGAATGAAAATTTGTGGAAAAAAAATTAACAAGTGTGATATGAGATTGCATTACCATGGACATTATGATGTTACTTTCCTACCAGATTACACTTAGATTCGTTCCCACTCCCGCAAGTTATTACCGACTATTAAAGGGCTGAACTTCCTTAATTTGTTTGGTTAGAACTAAGGTAGGGGGAAGATTTGAATTTCTTTGGTTAGTGTTTGGTTTGAGGAAGGAATTGAAACCCTCATCTCAACCAACTATTCTCCTTCTTTCACCTATCCTGTTTATCATAAGTTTGTAACTAAAGTTTCAACCATAACAAAGTGCATCATGGCCCTTTCCATGGTGGTTCTCCAATATTCATCTTAATGATCTCTGGGATTGTGCCGTTGCTCACTTCGTTCCTCTTGTTGTTAAGCTCTTCTTAGTTGAAATTCAGTTCTTCTTTTCCATGGAAAATTTCCTTCGAATTTGACCACAAAGGCACTAAATGGAGCATACGTGTCTAAATTCGTCTCCCTAAGATTGCCAAATGCTTAACGAAGTTAAAGTGACACTTCCATATTCTGGATATCTTTCTCTTTGCCTACACTCCCTTATTTACAGCATTTCTAGGTCTCTTTCCCCTTTAACCAACCAACTATTTTCCTATTCAAGCTACCCTTAACAAACTAATTATGCAATGCCTAAACCTAAAATACACCTTCCTATTAGGCTAGCTCATTACTCTCTACAAGTTTTATATCTACTTGTTTCATAGTGTTCAATGAGGGGACTACAGATAGTAGTGATGCTTGGTTGTCTGTGGTGACAGTTTTGGTCGAGGTAATGGCGGCGGATAGGAAGGTGTTGGCTGAATGGATAACAACTACACCTTAAGTTCAACAAGCAAGAGACACTAAGATTAACTAAAAACTACGAATGTAATTGAAAAGATCAAAATTCAATGTAACTAACAACTGCTTTGCCTAACAACTCTTGATCGATCATAGGGATTTCCATGGGGAATTAAGCTACCTAGCTAGCTACCTTTAATTTGCTTGATAATTATATATGTTTTGATAAATTAATTAACAGAGTATGTAGGGAAATGTTATTGGTTACTTGGTTAAGCTAAGTCAAAGTTATAGGTAAACTGCTCCAGAGTAACACATAAGTTAAACACAAACTCACATTAAATGGGGAGACAAGGGACTAAAAAAAGTTCTATAGGTGATTCTAATCGGGAAACCTAGCCTTAAGTCCTCTTTCAAGGATGCATTAACGTAAGAAACTCCTAATCCCAAGATTATGAATAGAATGTGAAGATTGTTAGAAAGGAGTTCGTCTTTTATTTGATCTTTCAATTAGTCCTCTATGGAAGCTTAGAAATTTCTGAACTTAACCACTTTATAAAGCATTTATGACAATGAAACACAAACTAGCCAAGGAAGTAAGCATCCAATCCAACTATCAAATAAGAGTCTACACCTATACCTTTATCTTCCAATGAAAAAGCAAAGCAGTAGCATGGCAAGCATTCATGTAGGCATACAAACACAAGCATACTACCAACACAATGACAATCAACTTTCAACACAAACCATGCTTGATAGTCTTCACCCTCATACTAAGCAACTATTCAATGCTTATATTGTGAAGTAGAACTCAATCTTCACATTCAATTCTTGCAAGCAAGGAGGAATCTATATTTATCAAATCTCTGCTAGCAAGATAATTAACTACTAATGATAGAAAGATAATCTCATCAAGTAAATATAAAATAAAGTGAGGAAAAGTTGAAGCTCTAATAGTCAAAAGATTGTTAATAACCTAAGATTAAGCAAGTAATAACAAGGATTGAACTATGATTAAAAAAACTAATCCAGATTAAGGCATTAAGCATGAGATTATGCTATAGTGCTAACTAAGAAAAATAAGATTAACTAGTAATTGTTGAAAAGATACAAAGAGGGAAAGATAAAGTCAAGAAATCGCTAAGAAGCTTGAAAATTCAAAGATTTCTCCAGTAAATCTCCCAACCAAGAGTTTCTCTTGCAAGAATATGGGGTCCAAACCTAGTGGGGTGCTTGTTCCGATTGGTGTATCTTCTAAAGTTTGGAGTAGTCGCTCCGTGGTAGCTCCATAGCCCCTCTCCAAAAGTTCTGTTCCAAAGCAGGAGAGCCTGCTCTGGGTATTGCTTAGCGCCCGCTCCGTGTAACTTCTGAATGACCGCTCCTAATGAGGTTTCTAAATCTCAATAGTGTCTGTTGCTCATTGGTTCCAAAAGCTATGACCAGCTTCCCGAGCTTTGACAATCTCCATCGAACATTTATTGACCTACAACTACAAGAAAACGCAAACGAAAGCAAGACACCACAAAAGAAAGCACGAGATGGGAATCTGGAAGAAAAAAAACATGAAATTAGGAAAAAAGGAGGGATAGGGGTGGGAAGATGGAATTATGGAAATCTATTGTTGACATCAGTAAAAAGTGAAAGCAGAGTAGACATAGGGGAAAAAAGCAAGGAAAACATGAAAATTAAGACTAATCCATGAGCAAGATTTTCAACAGTCGCCACAATGTTAAGGGCGTTGATCCTTAAATTTGATGATGTTGTAGGAGAATTGTTAGAAGATTCATTCTTAGGATGATGATGTTGCACAAAAACTTTTCAGAGAACCAGCTATTGTCGAGTTTGTTGTTTCTTAAAGTGCTTGCTCTTTTACAGTGTGACTTCTTATGTCTTCTCAGTAATCTACTTGCTAGTGTATCTGTTTCTGTTGTCCCTGTCTCTCTTGCCGAGGAGCTCTTTTGGTAGATTTCATCTGTTTCTTCCTAATATTTTTTTTATATAACAGATACAAAATTTGAAGCAATATAGAGAAATTGCAAAATGATGTTTTAGCTTGAGATTTAGCCATAAGATTATGTCTTCTGTCTCCAGTGATTGAAGTAATTTTTAAGGTACATAGAGAATTTGGAATACGTACCTTAGCTTTTCCAACTGGAGTTTTACCTTTCTTTCTTCTGCAGGAACTAGTCCCGCTTCAAGGTTTTTAAGGGAAAATGGAATCACACTCACCAAGGTCAAAGAGGAAAGTATAAAGTTACTTGGAAAAGGTGATTTGTACTTCTTCAGCCCAGAACATCCCCCTATCACTGAATCAGCTCAAAGAGCACTTGACTGGGCATTGGACCAGAAGCTGAAACCAGGTATTCATTTGTCCATATATTATTTTGCAGCTATCCAACATGTTTGGTTTTAGTTGTGTTATCAATATCTTAAAATTAACGTTCCTGTTTTCTGTAATGATGATATCACTGTGTCTTATAGTTAGGGTCATCATGATAAAATTTATCTCTGGATGCTTAAGTTTGAGACTTGATTCCCAGTAAGGTCTTAGGATGAAGTTGATTTCCTTGCTTGGTTTGTGTATTCTGAAAAAATTTATGAACACAAATTGAAAAAGGGACCAAGTACAATATCCTTTTATTGTATGATAGTGCCCGTAAAAACTACTCCTGGTGAGTAGAGACTAAAACATAGCCACTATCTTTTAGATGTCGATTTGACCTTTTGTATTGGTATGGCAATCTACTAATCTTAAGTTGCTAAAAACTCTGTCAAAATTCAGACCACTGATTCTGGTCATTGTAATTTGTAACCAAATAAAAGAGGGAACTTCAGTGGGACTCATTACACATTGTCTTATACGCAGATGAAAATGGGGAAATTACAACAATTGATTTGCTTCTTGGAGTATGGTCCGAGGAGGATTCTCCTGGTCATAAGATATTGGCTGCCCTAGGTTTTGATGATGACAAAGCCAAAAAGCTTAAATCTGTAGGTTCTAAACCTGGCTTTGATGAAGATAAGTAATCCATAATCCATATAGACCTTCTTTTGACATGGCTAACATTGTAATTCTTTTATCATAGAAAGCATGTAAATGGTGACCGAGCTCTTGTTAGAAAATCATGTAATGTGCTCGAATCACAAACTTTCATCCATTCTTCACTCCACACGTTTTTTGTGTATTACCATTCCCTCGATGGAACAATTTCCAGATAGGAAAACCATGATTTTCCTCTTATTCTGAACTTTATAAAATTTGAATTATTATTGTTAGTTTCTTTTTGAGTGTAGTATAGAGATTTCTTACAATATTTATATTGTTGTTAACATTTGTATCCTTCATATGGTAATGATTCATGGACATAGAAACTTAACCATATCTATTCATTGATTTTCTTCTTCAGTCGATAGATACAAATATCGTACTCGTATAATTTTTGGTGTCCGGGTCATGCTGTAAGTTCAGGACACGGGCTTTTTCCCGAGGTTTTAACTTCGCTTTCGTCTGACAAAAACTCTTCTCCGGCTGAGGCTCGTACTTGAGCCTTGCCTGCTTCTGCTACCCAGTCAATTCTTGCTATAAACACCAATAGCAAGACCAAGCAGGTTGATGCCCCAGCCAAGAACCCTAAGAAAAGGCCCCCAAGCCCTAGCTTTGCTTTGAAACCCAAGACACCACCCAAGGGTAAAGCCAGCAAGTAGAACCCTCCAAGGCTTGCGTACGTACCGAGCCATGGCCTTGCTGTTCCTCGGACAATACCTCCGGAAACTGTCAACGGAAAGTTAGCCACTTCAATCATAGCCATTATGACCATCATTTTCTTGACCCCTTTAATTACCCCCTCGCTATGGCTGAATAGTGGGCCCCACCAACTCCGGGCCGACACCATGACAGCGGCCCCCACACAACCTGAGAAGGCTGCTGTAACGAGTGACACGTAGGCTGATTTGTAAGCAGCTTTTGGTTGGTTCGCCCCAAGTTCGTTAGACACCCGGGTGGATGCACATACAGAGAGAGAGAGCATCACCGAGAACAGCAAGTAGTCGAAATTGAGCACAATCACGAGCACCCCAACAGCTTCCTTGGCATTAGGAAGTCGTCCTGTGAGGAGGACTAGGATCTCGTAGCACCACCACTCTAAGCAGGTAGTCAGGCAGCATGGCCCGCATAACCCGAGCAAGGCCCGCCACTCCTTGATCCCGTGATCCCACCACCCGCTTTCCTGCCACTTCTCTCTTCCCCTCAGTTCTAAGTGTAACACATAGATTGCTAGAAGTAACATTACTAGAAGATCACTTACCCAGACTGCTATGGCTACCCCTTCAAAACCCTTTGCTTGTATCAACAATATGTTGATCGGCACATGGAAAGCTACTGCAAGAGTTGAGCTTAGCATTATCGGAATAGTGATTCCCTGAGCACTCAAGTAAGCTTTTAGAGGGCATAGGAACGCGTTCACCATCAAATCCGGTAGCAGATAGAGAAGATACTTTTCAGCCATAGCTACCATATCCCGTTGTTGCCCGAAGAGGGGAAGAATTTTTCCAATATTCAGCCAAAGAATCGATATGGGGAGGGTGGCTAGGAGAAGCAAAAGAGTTGCCATGAGTAGAGTCCTATGAAGCAGCCTGTAGTTCTTCGCGCCATATGCCTGCCCACATATCGGTTCCATGGCCCCACATAAACCCGTCAAGATTGAGTAACCGGTGACATTAGCAAACGTGAACCCTAGAGCTCCTCCAGCTAGTTGTAGCTCACCGAGTCTTCCCAAAAAGGCTGTCGTGATTGCTTGCTTAATGAACCATGTCAAGTTCATTGCCATAAGTGGGACCGCTATCCCTCGTTGCTGCCTTAGCTCGGAAGTAGCATCTATGACTAAGTATTTTGACCATGATACCGCTGCAGGCGGAGGTGGAGGTTGATGATCCCCTGGTTTCGGTTTTGGCGGTGATGTTGTAGGCATGGTGGTGGTTGATTGAAAAAAGTGGATGGTATGGTAAAGAAAGTTAATGTTTTATACTTAGAAGGTGATAAGGTTGATTAAGCGTAAGTGAGTGCATGAGTTTTGTGATGGAGATCAGATGTGTAAAGAAAATGAAGGAAAAATGGGATTTAAAAGAGCATACAATAATGCATGAAGTGAGAGGATTGTGTGTAGTGCGTGATGAGTTCATGAATCATGAGTAGGCCATTGCTAACACTTCTTTTACAT

mRNA sequence

CAAAAATCAAAACCCAAGATCAAACCCGGTCTGTATCAGAAATAACGGTGACGTATAGTATCGTTTTCAGTAAGGAAGGCAGAAGTGAGAAGACCAATCCACAATCACCCCCACACTCTGTGAAGTCTTCTCCAACCTTCAACAATGGCTGCCAATGCTCACTCTCTCTCCAGAATACACTTACAGTTCCCTGAATTCAGAACATCTATCAACTCATCACAACGTATTTCGTCGCCTTTCATTTCCCTCAATTCACAGAATCCATTTCTGGGTAATCTTACACTCTCTCTCCTCCACCCTTCTTCAACAAGAACAACTCATGCACTCTCAATTACAACCAAACGACACCCTGTTTCTTCCGCCGTCTCTTTTAGTCTCCCAACTGGGATCCCGGATAGGGTTGTTGGTGATAAAATTCCCAAGTGGTCAGGGAGGGCAATTAAATCATTTGCTATGAGTGAATTGGAAGCTAGGAAGCTCAAGTACCCTACAACTGGGACTGAAGCCCTTCTTATGGGACTTCTTATAGAAGGAACTAGTCCCGCTTCAAGGTTTTTAAGGGAAAATGGAATCACACTCACCAAGGTCAAAGAGGAAAGTATAAAGTTACTTGGAAAAGGTGATTTGTACTTCTTCAGCCCAGAACATCCCCCTATCACTGAATCAGCTCAAAGAGCACTTGACTGGGCATTGGACCAGAAGCTGAAACCAGATGAAAATGGGGAAATTACAACAATTGATTTGCTTCTTGGAGTATGGTCCGAGGAGGATTCTCCTGGTCATAAGATATTGGCTGCCCTAGGTTTTGATGATGACAAAGCCAAAAAGCTTAAATCTGTAGGTTCTAAACCTGGCTTTGATGAAGATAAGTAATCCATAATCCATATAGACCTTCTTTTGACATGGCTAACATTGTAATTCTTTTATCATAGAAAGCATGTAAATGGTGACCGAGCTCTTGTTAGAAAATCATGTAATGTGCTCGAATCACAAACTTTCATCCATTCTTCACTCCACACGTTTTTTGTGTATTACCATTCCCTCGATGGAACAATTTCCAGATAGGAAAACCATGATTTTCCTCTTATTCTGAACTTTATAAAATTTGAATTATTATTGTTAGTTTCTTTTTGAGTGTAGTATAGAGATTTCTTACAATATTTATATTGTTGTTAACATTTGTATCCTTCATATGGTAATGATTCATGGACATAGAAACTTAACCATATCTATTCATTGATTTTCTTCTTCAGTCGATAGATACAAATATCGTACTCGTATAATTTTTGGTGTCCGGGTCATGCTGTAAGTTCAGGACACGGGCTTTTTCCCGAGGTTTTAACTTCGCTTTCGTCTGACAAAAACTCTTCTCCGGCTGAGGCTCGTACTTGAGCCTTGCCTGCTTCTGCTACCCAGTCAATTCTTGCTATAAACACCAATAGCAAGACCAAGCAGGTTGATGCCCCAGCCAAGAACCCTAAGAAAAGGCCCCCAAGCCCTAGCTTTGCTTTGAAACCCAAGACACCACCCAAGGGTAAAGCCAGCAAGTAGAACCCTCCAAGGCTTGCGTACGTACCGAGCCATGGCCTTGCTGTTCCTCGGACAATACCTCCGGAAACTGTCAACGGAAAGTTAGCCACTTCAATCATAGCCATTATGACCATCATTTTCTTGACCCCTTTAATTACCCCCTCGCTATGGCTGAATAGTGGGCCCCACCAACTCCGGGCCGACACCATGACAGCGGCCCCCACACAACCTGAGAAGGCTGCTGTAACGAGTGACACGTAGGCTGATTTGTAAGCAGCTTTTGGTTGGTTCGCCCCAAGTTCGTTAGACACCCGGGTGGATGCACATACAGAGAGAGAGAGCATCACCGAGAACAGCAAGTAGTCGAAATTGAGCACAATCACGAGCACCCCAACAGCTTCCTTGGCATTAGGAAGTCGTCCTGTGAGGAGGACTAGGATCTCGTAGCACCACCACTCTAAGCAGGTAGTCAGGCAGCATGGCCCGCATAACCCGAGCAAGGCCCGCCACTCCTTGATCCCGTGATCCCACCACCCGCTTTCCTGCCACTTCTCTCTTCCCCTCAGTTCTAAGTGTAACACATAGATTGCTAGAAGTAACATTACTAGAAGATCACTTACCCAGACTGCTATGGCTACCCCTTCAAAACCCTTTGCTTGTATCAACAATATGTTGATCGGCACATGGAAAGCTACTGCAAGAGTTGAGCTTAGCATTATCGGAATAGTGATTCCCTGAGCACTCAAGTAAGCTTTTAGAGGGCATAGGAACGCGTTCACCATCAAATCCGGTAGCAGATAGAGAAGATACTTTTCAGCCATAGCTACCATATCCCGTTGTTGCCCGAAGAGGGGAAGAATTTTTCCAATATTCAGCCAAAGAATCGATATGGGGAGGGTGGCTAGGAGAAGCAAAAGAGTTGCCATGAGTAGAGTCCTATGAAGCAGCCTGTAGTTCTTCGCGCCATATGCCTGCCCACATATCGGTTCCATGGCCCCACATAAACCCGTCAAGATTGAGTAACCGGTGACATTAGCAAACGTGAACCCTAGAGCTCCTCCAGCTAGTTGTAGCTCACCGAGTCTTCCCAAAAAGGCTGTCGTGATTGCTTGCTTAATGAACCATGTCAAGTTCATTGCCATAAGTGGGACCGCTATCCCTCGTTGCTGCCTTAGCTCGGAAGTAGCATCTATGACTAAGTATTTTGACCATGATACCGCTGCAGGCGGAGGTGGAGGTTGATGATCCCCTGGTTTCGGTTTTGGCGGTGATGTTGTAGGCATGGTGGTGGTTGATTGAAAAAAGTGGATGGTATGGTAAAGAAAGTTAATGTTTTATACTTAGAAGGTGATAAGGTTGATTAAGCGTAAGTGAGTGCATGAGTTTTGTGATGGAGATCAGATGTGTAAAGAAAATGAAGGAAAAATGGGATTTAAAAGAGCATACAATAATGCATGAAGTGAGAGGATTGTGTGTAGTGCGTGATGAGTTCATGAATCATGAGTAGGCCATTGCTAACACTTCTTTTACAT

Coding sequence (CDS)

ATGGCTGCCAATGCTCACTCTCTCTCCAGAATACACTTACAGTTCCCTGAATTCAGAACATCTATCAACTCATCACAACGTATTTCGTCGCCTTTCATTTCCCTCAATTCACAGAATCCATTTCTGGGTAATCTTACACTCTCTCTCCTCCACCCTTCTTCAACAAGAACAACTCATGCACTCTCAATTACAACCAAACGACACCCTGTTTCTTCCGCCGTCTCTTTTAGTCTCCCAACTGGGATCCCGGATAGGGTTGTTGGTGATAAAATTCCCAAGTGGTCAGGGAGGGCAATTAAATCATTTGCTATGAGTGAATTGGAAGCTAGGAAGCTCAAGTACCCTACAACTGGGACTGAAGCCCTTCTTATGGGACTTCTTATAGAAGGAACTAGTCCCGCTTCAAGGTTTTTAAGGGAAAATGGAATCACACTCACCAAGGTCAAAGAGGAAAGTATAAAGTTACTTGGAAAAGGTGATTTGTACTTCTTCAGCCCAGAACATCCCCCTATCACTGAATCAGCTCAAAGAGCACTTGACTGGGCATTGGACCAGAAGCTGAAACCAGATGAAAATGGGGAAATTACAACAATTGATTTGCTTCTTGGAGTATGGTCCGAGGAGGATTCTCCTGGTCATAAGATATTGGCTGCCCTAGGTTTTGATGATGACAAAGCCAAAAAGCTTAAATCTGTAGGTTCTAAACCTGGCTTTGATGAAGATAAGTAA

Protein sequence

MAANAHSLSRIHLQFPEFRTSINSSQRISSPFISLNSQNPFLGNLTLSLLHPSSTRTTHALSITTKRHPVSSAVSFSLPTGIPDRVVGDKIPKWSGRAIKSFAMSELEARKLKYPTTGTEALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRALDWALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGFDEDK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo26957.1Spo26957.1mRNA


Homology
[Close]
BLAST of Spo26957.1 vs. NCBI nr
Match: gi|902234030|gb|KNA23299.1| (hypothetical protein SOVF_026110 isoform A [Spinacia oleracea])

HSP 1 Score: 476.5 bits (1225), Expect = 2.800e-131
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 1 

		  

Query: 1   MAANAHSLSRIHLQFPEFRTSINSSQRISSPFISLNSQNPFLGNLTLSLLHPSSTRTTHA 60
           MAANAHSLSRIHLQFPEFRTSINSSQRISSPFISLNSQNPFLGNLTLSLLHPSSTRTTHA
Sbjct: 1   MAANAHSLSRIHLQFPEFRTSINSSQRISSPFISLNSQNPFLGNLTLSLLHPSSTRTTHA 60

Query: 61  LSITTKRHPVSSAVSFSLPTGIPDRVVGDKIPKWSGRAIKSFAMSELEARKLKYPTTGTE 120
           LSITTKRHPVSSAVSFSLPTGIPDRVVGDKIPKWSGRAIKSFAMSELEARKLKYPTTGTE
Sbjct: 61  LSITTKRHPVSSAVSFSLPTGIPDRVVGDKIPKWSGRAIKSFAMSELEARKLKYPTTGTE 120

Query: 121 ALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRALD 180
           ALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRALD
Sbjct: 121 ALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRALD 180

Query: 181 WALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGFDE 240
           WALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGFDE
Sbjct: 181 WALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGFDE 240

Query: 241 DK 243
           DK
Sbjct: 241 DK 242
[Close]
BLAST of Spo26957.1 vs. NCBI nr
Match: gi|902234031|gb|KNA23300.1| (hypothetical protein SOVF_026110 isoform B [Spinacia oleracea])

HSP 1 Score: 470.7 bits (1210), Expect = 1.500e-129
Identity = 241/243 (99.18%), Postives = 242/243 (99.59%), Query Frame = 1 

		  

Query: 1   MAANAHSLSRIHLQFPEFRTSINSSQRISSPFISLNSQNPFLGNLTLSLLHPSSTRTTHA 60
           MAANAHSLSRIHLQFPEFRTSINSSQRISSPFISLNSQNPFLGNLTLSLLHPSSTRTTHA
Sbjct: 1   MAANAHSLSRIHLQFPEFRTSINSSQRISSPFISLNSQNPFLGNLTLSLLHPSSTRTTHA 60

Query: 61  LSITTKRHPVSSAVSFSLPTGIPDRVVGDKIP-KWSGRAIKSFAMSELEARKLKYPTTGT 120
           LSITTKRHPVSSAVSFSLPTGIPDRVVGDKIP +WSGRAIKSFAMSELEARKLKYPTTGT
Sbjct: 61  LSITTKRHPVSSAVSFSLPTGIPDRVVGDKIPNRWSGRAIKSFAMSELEARKLKYPTTGT 120

Query: 121 EALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRAL 180
           EALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRAL
Sbjct: 121 EALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRAL 180

Query: 181 DWALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGFD 240
           DWALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGFD
Sbjct: 181 DWALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGFD 240

Query: 241 EDK 243
           EDK
Sbjct: 241 EDK 243
[Close]
BLAST of Spo26957.1 vs. NCBI nr
Match: gi|731331395|ref|XP_010676640.1| (PREDICTED: clp protease-related protein At4g12060, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 342.4 bits (877), Expect = 6.300e-91
Identity = 178/241 (73.86%), Postives = 199/241 (82.57%), Query Frame = 1 

		  

Query: 1   MAANAHSLSRIHL----QFPEFRTSINSSQRISSPFISLNS---QNPFLGNLTLSLLHPS 60
           MAA +HSLSRIHL      P+ +T  NS   IS P  SL+S   QNPFLG LTLSLLHPS
Sbjct: 1   MAATSHSLSRIHLPSAASCPQLKTPTNSYNSISFPLFSLSSKPSQNPFLGTLTLSLLHPS 60

Query: 61  STRTTHALSITTKRHPVSSAVSFSLPTGIPDRVVGDKIPKWSGRAIKSFAMSELEARKLK 120
           ST   H  SI TK+ P+S+AVS  LPT  P+R+ GDK+PKWS   IK++AM ELEARKLK
Sbjct: 61  ST-IIHLSSIPTKQRPISAAVSLGLPTANPERIKGDKVPKWSCTGIKAYAMGELEARKLK 120

Query: 121 YPTTGTEALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITE 180
           YPTTGTEALLMG+LIEGTSPASRFLRENGITLTKVK ESIKLLGKGDLYFFSPEHPP+TE
Sbjct: 121 YPTTGTEALLMGILIEGTSPASRFLRENGITLTKVKVESIKLLGKGDLYFFSPEHPPLTE 180

Query: 181 SAQRALDWALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVG 235
           SAQ+ALDWA D+KLK  + GEITT DLLLG+WSEE+SPGHKILAALGFDD+KAKKLKS+G
Sbjct: 181 SAQKALDWAADEKLKSGDEGEITTTDLLLGIWSEEESPGHKILAALGFDDEKAKKLKSLG 240
[Close]
BLAST of Spo26957.1 vs. NCBI nr
Match: gi|661886501|emb|CDP09865.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 261.5 bits (667), Expect = 1.400e-66
Identity = 130/205 (63.41%), Postives = 165/205 (80.49%), Query Frame = 1 

		  

Query: 38  QNPFLGNLTLSLLHPSSTRTTHALSITTKRHPVSSAVSFSLPTGIPDRVVG-DKIPKWSG 97
           Q+P+LG  +   +H S+ R         +  P+ + V FSLPT  P+RV   +K+PKWS 
Sbjct: 42  QSPWLGCTSRISVHSSNLRP-----FIQRHRPIKATVIFSLPTSNPERVASAEKVPKWSA 101

Query: 98  RAIKSFAMSELEARKLKYPTTGTEALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLL 157
           +AIKSFAMSELEARKLKYPTTGT ALLMG+LIEGT+ AS+FLR NGITL+KV+EE++KLL
Sbjct: 102 KAIKSFAMSELEARKLKYPTTGTAALLMGILIEGTNFASKFLRANGITLSKVREETVKLL 161

Query: 158 GKGDLYFFSPEHPPITESAQRALDWALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKIL 217
           GK D+YFFSPEHPP+TE AQRALDWA+D+KLK  ++ E+TT  LLLGVWS+++SPGHKIL
Sbjct: 162 GKADMYFFSPEHPPLTEDAQRALDWAVDEKLKSGDDREVTTAHLLLGVWSQDESPGHKIL 221

Query: 218 AALGFDDDKAKKLKSVGSKPGFDED 242
           AA GF+D+KA++LKSV S+PGF +D
Sbjct: 222 AAFGFNDEKAQELKSVISEPGFIDD 241
[Close]
BLAST of Spo26957.1 vs. NCBI nr
Match: gi|747040965|ref|XP_011069964.1| (PREDICTED: clp protease-related protein At4g12060, chloroplastic isoform X1 [Sesamum indicum])

HSP 1 Score: 258.5 bits (659), Expect = 1.200e-65
Identity = 138/238 (57.98%), Postives = 180/238 (75.63%), Query Frame = 1 

		  

Query: 5   AHSLSRIHLQFPEFRTSINSSQRISSPFISLNSQNPFLGNLTLSLLHPSSTRTTHALSIT 64
           AHSLS   +  PE +   N ++      ISL SQ  +LG + ++     S +++    + 
Sbjct: 3   AHSLSATSITRPELK-QFNLNKSALGLHISLRSQ--WLGTIAMNKF---SLQSSSIRPLF 62

Query: 65  TKRHPVSSAVSFSLPTGIPDRV-VGDKIPKWSGRAIKSFAMSELEARKLKYPTTGTEALL 124
           T+R  +S+ +SFSLPT  PDR    +KIP+WS +AIKSFAMSELEARK+K PTT TEALL
Sbjct: 63  TRRRRISATISFSLPTSKPDRTDATEKIPRWSSKAIKSFAMSELEARKIKSPTTDTEALL 122

Query: 125 MGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRALDWAL 184
           MG+LIEGTS AS+FLR NGITL KV++E +KL GK +++FFSPEHPP+TE+AQRALDWA+
Sbjct: 123 MGILIEGTSFASKFLRANGITLLKVRDEILKLRGKPEMFFFSPEHPPLTEAAQRALDWAI 182

Query: 185 DQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGFDED 242
           D+KLK  ENGEITT  LLLG+W +E+SPGH++LAALGF+D+KAK+L S+ S+PGF ED
Sbjct: 183 DEKLKSGENGEITTTHLLLGLWRQEESPGHQVLAALGFNDEKAKELDSLISEPGFVED 234
[Close]
BLAST of Spo26957.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWK4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_026110 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 2.000e-131
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 1 

		  

Query: 1   MAANAHSLSRIHLQFPEFRTSINSSQRISSPFISLNSQNPFLGNLTLSLLHPSSTRTTHA 60
           MAANAHSLSRIHLQFPEFRTSINSSQRISSPFISLNSQNPFLGNLTLSLLHPSSTRTTHA
Sbjct: 1   MAANAHSLSRIHLQFPEFRTSINSSQRISSPFISLNSQNPFLGNLTLSLLHPSSTRTTHA 60

Query: 61  LSITTKRHPVSSAVSFSLPTGIPDRVVGDKIPKWSGRAIKSFAMSELEARKLKYPTTGTE 120
           LSITTKRHPVSSAVSFSLPTGIPDRVVGDKIPKWSGRAIKSFAMSELEARKLKYPTTGTE
Sbjct: 61  LSITTKRHPVSSAVSFSLPTGIPDRVVGDKIPKWSGRAIKSFAMSELEARKLKYPTTGTE 120

Query: 121 ALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRALD 180
           ALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRALD
Sbjct: 121 ALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRALD 180

Query: 181 WALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGFDE 240
           WALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGFDE
Sbjct: 181 WALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGFDE 240

Query: 241 DK 243
           DK
Sbjct: 241 DK 242
[Close]
BLAST of Spo26957.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUU0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_026110 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.100e-129
Identity = 241/243 (99.18%), Postives = 242/243 (99.59%), Query Frame = 1 

		  

Query: 1   MAANAHSLSRIHLQFPEFRTSINSSQRISSPFISLNSQNPFLGNLTLSLLHPSSTRTTHA 60
           MAANAHSLSRIHLQFPEFRTSINSSQRISSPFISLNSQNPFLGNLTLSLLHPSSTRTTHA
Sbjct: 1   MAANAHSLSRIHLQFPEFRTSINSSQRISSPFISLNSQNPFLGNLTLSLLHPSSTRTTHA 60

Query: 61  LSITTKRHPVSSAVSFSLPTGIPDRVVGDKIP-KWSGRAIKSFAMSELEARKLKYPTTGT 120
           LSITTKRHPVSSAVSFSLPTGIPDRVVGDKIP +WSGRAIKSFAMSELEARKLKYPTTGT
Sbjct: 61  LSITTKRHPVSSAVSFSLPTGIPDRVVGDKIPNRWSGRAIKSFAMSELEARKLKYPTTGT 120

Query: 121 EALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRAL 180
           EALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRAL
Sbjct: 121 EALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRAL 180

Query: 181 DWALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGFD 240
           DWALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGFD
Sbjct: 181 DWALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGFD 240

Query: 241 EDK 243
           EDK
Sbjct: 241 EDK 243
[Close]
BLAST of Spo26957.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F8H9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g101810 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 4.400e-91
Identity = 178/241 (73.86%), Postives = 199/241 (82.57%), Query Frame = 1 

		  

Query: 1   MAANAHSLSRIHL----QFPEFRTSINSSQRISSPFISLNS---QNPFLGNLTLSLLHPS 60
           MAA +HSLSRIHL      P+ +T  NS   IS P  SL+S   QNPFLG LTLSLLHPS
Sbjct: 1   MAATSHSLSRIHLPSAASCPQLKTPTNSYNSISFPLFSLSSKPSQNPFLGTLTLSLLHPS 60

Query: 61  STRTTHALSITTKRHPVSSAVSFSLPTGIPDRVVGDKIPKWSGRAIKSFAMSELEARKLK 120
           ST   H  SI TK+ P+S+AVS  LPT  P+R+ GDK+PKWS   IK++AM ELEARKLK
Sbjct: 61  ST-IIHLSSIPTKQRPISAAVSLGLPTANPERIKGDKVPKWSCTGIKAYAMGELEARKLK 120

Query: 121 YPTTGTEALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITE 180
           YPTTGTEALLMG+LIEGTSPASRFLRENGITLTKVK ESIKLLGKGDLYFFSPEHPP+TE
Sbjct: 121 YPTTGTEALLMGILIEGTSPASRFLRENGITLTKVKVESIKLLGKGDLYFFSPEHPPLTE 180

Query: 181 SAQRALDWALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVG 235
           SAQ+ALDWA D+KLK  + GEITT DLLLG+WSEE+SPGHKILAALGFDD+KAKKLKS+G
Sbjct: 181 SAQKALDWAADEKLKSGDEGEITTTDLLLGIWSEEESPGHKILAALGFDDEKAKKLKSLG 240
[Close]
BLAST of Spo26957.1 vs. UniProtKB/TrEMBL
Match: A0A068UMV3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00030344001 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 9.900e-67
Identity = 130/205 (63.41%), Postives = 165/205 (80.49%), Query Frame = 1 

		  

Query: 38  QNPFLGNLTLSLLHPSSTRTTHALSITTKRHPVSSAVSFSLPTGIPDRVVG-DKIPKWSG 97
           Q+P+LG  +   +H S+ R         +  P+ + V FSLPT  P+RV   +K+PKWS 
Sbjct: 42  QSPWLGCTSRISVHSSNLRP-----FIQRHRPIKATVIFSLPTSNPERVASAEKVPKWSA 101

Query: 98  RAIKSFAMSELEARKLKYPTTGTEALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLL 157
           +AIKSFAMSELEARKLKYPTTGT ALLMG+LIEGT+ AS+FLR NGITL+KV+EE++KLL
Sbjct: 102 KAIKSFAMSELEARKLKYPTTGTAALLMGILIEGTNFASKFLRANGITLSKVREETVKLL 161

Query: 158 GKGDLYFFSPEHPPITESAQRALDWALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKIL 217
           GK D+YFFSPEHPP+TE AQRALDWA+D+KLK  ++ E+TT  LLLGVWS+++SPGHKIL
Sbjct: 162 GKADMYFFSPEHPPLTEDAQRALDWAVDEKLKSGDDREVTTAHLLLGVWSQDESPGHKIL 221

Query: 218 AALGFDDDKAKKLKSVGSKPGFDED 242
           AA GF+D+KA++LKSV S+PGF +D
Sbjct: 222 AAFGFNDEKAQELKSVISEPGFIDD 241
[Close]
BLAST of Spo26957.1 vs. UniProtKB/TrEMBL
Match: A0A061G5N7_THECC (Double Clp-N motif protein OS=Theobroma cacao GN=TCM_016099 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.500e-64
Identity = 138/237 (58.23%), Postives = 174/237 (73.42%), Query Frame = 1 

		  

Query: 3   ANAHSLSRIHLQFPEFRTSINSSQ-RISSPFISLNS-QNPFLGNLTLSLLHPSSTRTTHA 62
           A  H LS+     P    S N S+   SS F+  +  Q+P+LG + LSL      R++  
Sbjct: 2   AATHCLSKPATVTPVITQSENKSKPSSSSSFLKPHGLQSPWLG-IKLSL------RSSKP 61

Query: 63  LSITTKRHPVSSAVSFSLPTGIPDRVVG-DKIPKWSGRAIKSFAMSELEARKLKYPTTGT 122
                   P+++ VSFSLPT  PDRV   +K+PKWS RAIKSF M+ELEARKLKYPTTGT
Sbjct: 62  RPHLPNHRPITATVSFSLPTAKPDRVASTEKVPKWSRRAIKSFVMAELEARKLKYPTTGT 121

Query: 123 EALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRAL 182
           EA LMG+LIEGTS A++FLR NGITL KV+EE++K+LGK D+Y+FSPEHPP+TE+AQRAL
Sbjct: 122 EAFLMGILIEGTSLAAKFLRANGITLFKVREETVKVLGKADMYYFSPEHPPLTEAAQRAL 181

Query: 183 DWALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKP 237
           DWA+DQKLK  ++GE+TT  LLLG+WSE +SPGHKI+ ALGF D KAK+L S+ S+P
Sbjct: 182 DWAVDQKLKSGDDGEVTTTHLLLGIWSEVESPGHKIMTALGFIDVKAKELASLSSEP 231
[Close]
BLAST of Spo26957.1 vs. ExPASy Swiss-Prot
Match: CLPT2_ARATH (ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic OS=Arabidopsis thaliana GN=CLPT2 PE=1 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.800e-60
Identity = 131/220 (59.55%), Postives = 156/220 (70.91%), Query Frame = 1 

		  

Query: 24  SSQRISSPFISLNSQ----NPFLGNLTLSLLHPSSTRTTHALSITTKRHPVSSAVSFSLP 83
           S +++S P    +++    NP+LG +  SL   S T    AL     R    SA+S SLP
Sbjct: 23  SKKKLSVPLYFFSTRKALTNPWLGVVDSSL---SLTSPVSALQTNRPRRIHKSAIS-SLP 82

Query: 84  TGIPDRVVGD-KIPKWSGRAIKSFAMSELEARKLKYPTTGTEALLMGLLIEGTSPASRFL 143
           T  PD VV D K PKWS RAIKSFAM ELEARKLKYP TGTEALLMG+LIEGTS  S+FL
Sbjct: 83  TANPDLVVSDAKKPKWSWRAIKSFAMGELEARKLKYPNTGTEALLMGILIEGTSFTSKFL 142

Query: 144 RENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRALDWALDQKLKPDENGEITTI 203
           R N I L KV+EE++KLLGK D+YFFSPEHPP+TE AQRALD ALDQ LK    GE+   
Sbjct: 143 RANKIMLYKVREETVKLLGKADMYFFSPEHPPLTEDAQRALDSALDQNLKAGGIGEVMPA 202

Query: 204 DLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGF 239
            +LLG+WSE +SPGHKILA LGF D+K+K+L+S  S+ GF
Sbjct: 203 HILLGIWSEVESPGHKILATLGFTDEKSKELESFASESGF 238
[Close]
BLAST of Spo26957.1 vs. ExPASy Swiss-Prot
Match: CLPT1_ARATH (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic OS=Arabidopsis thaliana GN=CLPT1 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.300e-55
Identity = 111/210 (52.86%), Postives = 152/210 (72.38%), Query Frame = 1 

		  

Query: 28  ISSPFISLNSQNPFLGN-----LTLSLLHPS--STRTTHALSITTKRHPVSSAVSFSLPT 87
           +S+P I ++ QN    +     LT SLL     +T+ +H   +   R   S++   ++P 
Sbjct: 13  LSNPRIFVSRQNGSPSSSSRIPLTSSLLGKKLLATQPSHRCFVPKLRCLTSASTVLNVPI 72

Query: 88  GIPDRVVGDKIPKWSGRAIKSFAMSELEARKLKYPTTGTEALLMGLLIEGTSPASRFLRE 147
             P+    DKIPKWS RAIKS AM ELEARKLKYP+TGTEA+LMG+L+EGTS  ++FLR 
Sbjct: 73  AQPENGSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMGILVEGTSTVAKFLRG 132

Query: 148 NGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRALDWALDQKLKPDENGEITTIDL 207
           NG+TL KV++E++ LLGK D+YFFSPEHPP+TE AQ+A+ WA+D+K K D +GE+TT  L
Sbjct: 133 NGVTLFKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEKNKSDVDGELTTAYL 192

Query: 208 LLGVWSEEDSPGHKILAALGFDDDKAKKLK 231
           LLGVWS++DS G +IL  LGF++DKAK+++
Sbjct: 193 LLGVWSQKDSAGRQILEKLGFNEDKAKEVE 222
[Close]
BLAST of Spo26957.1 vs. ExPASy Swiss-Prot
Match: CLPC2_ORYSJ (Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica GN=CLPC2 PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 2.000e-12
Identity = 52/168 (30.95%), Postives = 90/168 (53.57%), Query Frame = 1 

		  

Query: 56  RTTHALSITTKRHPVSSAVSFSLPTGIPDR-VVGDKIPKWSGRAIKSFAMSELEARKLKY 115
           R+ H+ S+T   +  S+  S+    G   R V      +++ +AIK   +++ EAR+L +
Sbjct: 53  RSVHSFSVTPVTNFRSTVASYRSRRGRRARFVTRSMFERFTEKAIKVIMLAQEEARRLGH 112

Query: 116 PTTGTEALLMGLLIEGTSPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITES 175
              GTE +L+GL+ EGT  A++ L+  GI L   + E  K++G+G+   F     P T  
Sbjct: 113 NFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGN--GFVAVEIPFTPR 172

Query: 176 AQRALDWALDQKLKPDENGEITTIDLLLGVWSEEDSPGHKILAALGFD 223
           A+R L+ +L++  +   N  I +  LLLG+  E +    ++L +LG D
Sbjct: 173 AKRVLELSLEEARQLGHN-YIGSEHLLLGLLREGEGVAARVLESLGAD 217
[Close]
BLAST of Spo26957.1 vs. ExPASy Swiss-Prot
Match: CLPC1_ORYSJ (Chaperone protein ClpC1, chloroplastic OS=Oryza sativa subsp. japonica GN=CLPC1 PE=2 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 3.400e-12
Identity = 50/156 (32.05%), Postives = 84/156 (53.85%), Query Frame = 1 

		  

Query: 73  AVSFSLPTGIPDR-VVGDKIPKWSGRAIKSFAMSELEARKLKYPTTGTEALLMGLLIEGT 132
           A   S P G+  R VV     +++ +AIK   +++ EAR+L +   GTE +L+GL+ EGT
Sbjct: 69  ASQISRPRGLGSRGVVRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGT 128

Query: 133 SPASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRALDWALDQKLKPDE 192
             A++ L+  GI L   + E  K++G+G    F     P T  A+R L+ +L++  +   
Sbjct: 129 GIAAKVLKSMGINLKDARVEVEKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGH 188

Query: 193 NGEITTIDLLLGVWSEEDSPGHKILAALGFDDDKAK 228
           N  I +  LLLG+  E +    ++L +LG D +  +
Sbjct: 189 N-YIGSEHLLLGLLREGEGVAARVLESLGADPNNIR 221
[Close]
BLAST of Spo26957.1 vs. ExPASy Swiss-Prot
Match: CLPA_BRANA (ATP-dependent Clp protease ATP-binding subunit ClpA homolog, chloroplastic (Fragment) OS=Brassica napus GN=CLPA PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.900e-11
Identity = 48/149 (32.21%), Postives = 81/149 (54.36%), Query Frame = 1 

		  

Query: 75  SFSLPTGIPDR-VVGDKIPKWSGRAIKSFAMSELEARKLKYPTTGTEALLMGLLIEGTSP 134
           + ++P G   R VV     +++ +AIK   +++ EAR+L +   GTE +L+GL+ EGT  
Sbjct: 25  AMNVPKGKGSRGVVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGI 84

Query: 135 ASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRALDWALDQKLKPDENG 194
           A++ L+  GI L   + E  K++G+G    F     P T  A+R L+ +L++  +   N 
Sbjct: 85  AAKVLKSMGINLKDARVEVEKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGHN- 144

Query: 195 EITTIDLLLGVWSEEDSPGHKILAALGFD 223
            I +  LLLG+  E +    ++L  LG D
Sbjct: 145 YIGSEHLLLGLLREGEGVAARVLENLGAD 170
[Close]
BLAST of Spo26957.1 vs. TAIR (Arabidopsis)
Match: AT4G12060.1 (Double Clp-N motif protein)

HSP 1 Score: 231.5 bits (589), Expect = 5.500e-61
Identity = 131/220 (59.55%), Postives = 156/220 (70.91%), Query Frame = 1 

		  

Query: 24  SSQRISSPFISLNSQ----NPFLGNLTLSLLHPSSTRTTHALSITTKRHPVSSAVSFSLP 83
           S +++S P    +++    NP+LG +  SL   S T    AL     R    SA+S SLP
Sbjct: 23  SKKKLSVPLYFFSTRKALTNPWLGVVDSSL---SLTSPVSALQTNRPRRIHKSAIS-SLP 82

Query: 84  TGIPDRVVGD-KIPKWSGRAIKSFAMSELEARKLKYPTTGTEALLMGLLIEGTSPASRFL 143
           T  PD VV D K PKWS RAIKSFAM ELEARKLKYP TGTEALLMG+LIEGTS  S+FL
Sbjct: 83  TANPDLVVSDAKKPKWSWRAIKSFAMGELEARKLKYPNTGTEALLMGILIEGTSFTSKFL 142

Query: 144 RENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRALDWALDQKLKPDENGEITTI 203
           R N I L KV+EE++KLLGK D+YFFSPEHPP+TE AQRALD ALDQ LK    GE+   
Sbjct: 143 RANKIMLYKVREETVKLLGKADMYFFSPEHPPLTEDAQRALDSALDQNLKAGGIGEVMPA 202

Query: 204 DLLLGVWSEEDSPGHKILAALGFDDDKAKKLKSVGSKPGF 239
            +LLG+WSE +SPGHKILA LGF D+K+K+L+S  S+ GF
Sbjct: 203 HILLGIWSEVESPGHKILATLGFTDEKSKELESFASESGF 238
[Close]
BLAST of Spo26957.1 vs. TAIR (Arabidopsis)
Match: AT4G25370.1 (Double Clp-N motif protein)

HSP 1 Score: 215.3 bits (547), Expect = 4.100e-56
Identity = 111/210 (52.86%), Postives = 152/210 (72.38%), Query Frame = 1 

		  

Query: 28  ISSPFISLNSQNPFLGN-----LTLSLLHPS--STRTTHALSITTKRHPVSSAVSFSLPT 87
           +S+P I ++ QN    +     LT SLL     +T+ +H   +   R   S++   ++P 
Sbjct: 13  LSNPRIFVSRQNGSPSSSSRIPLTSSLLGKKLLATQPSHRCFVPKLRCLTSASTVLNVPI 72

Query: 88  GIPDRVVGDKIPKWSGRAIKSFAMSELEARKLKYPTTGTEALLMGLLIEGTSPASRFLRE 147
             P+    DKIPKWS RAIKS AM ELEARKLKYP+TGTEA+LMG+L+EGTS  ++FLR 
Sbjct: 73  AQPENGSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMGILVEGTSTVAKFLRG 132

Query: 148 NGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRALDWALDQKLKPDENGEITTIDL 207
           NG+TL KV++E++ LLGK D+YFFSPEHPP+TE AQ+A+ WA+D+K K D +GE+TT  L
Sbjct: 133 NGVTLFKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEKNKSDVDGELTTAYL 192

Query: 208 LLGVWSEEDSPGHKILAALGFDDDKAKKLK 231
           LLGVWS++DS G +IL  LGF++DKAK+++
Sbjct: 193 LLGVWSQKDSAGRQILEKLGFNEDKAKEVE 222
[Close]
BLAST of Spo26957.1 vs. TAIR (Arabidopsis)
Match: AT5G50920.1 (CLPC homologue 1)

HSP 1 Score: 69.3 bits (168), Expect = 3.600e-12
Identity = 47/149 (31.54%), Postives = 80/149 (53.69%), Query Frame = 1 

		  

Query: 75  SFSLPTGIPDR-VVGDKIPKWSGRAIKSFAMSELEARKLKYPTTGTEALLMGLLIEGTSP 134
           + ++P G   R  V     +++ +AIK   +++ EAR+L +   GTE +L+GL+ EGT  
Sbjct: 78  AMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGI 137

Query: 135 ASRFLRENGITLTKVKEESIKLLGKGDLYFFSPEHPPITESAQRALDWALDQKLKPDENG 194
           A++ L+  GI L   + E  K++G+G    F     P T  A+R L+ +L++  +   N 
Sbjct: 138 AAKVLKSMGINLKDARVEVEKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGHN- 197

Query: 195 EITTIDLLLGVWSEEDSPGHKILAALGFD 223
            I +  LLLG+  E +    ++L  LG D
Sbjct: 198 YIGSEHLLLGLLREGEGVAARVLENLGAD 223
[Close]
BLAST of Spo26957.1 vs. TAIR (Arabidopsis)
Match: AT3G48870.1 (Clp ATPase)

HSP 1 Score: 68.6 bits (166), Expect = 6.200e-12
Identity = 44/130 (33.85%), Postives = 73/130 (56.15%), Query Frame = 1 

		  

Query: 93  KWSGRAIKSFAMSELEARKLKYPTTGTEALLMGLLIEGTSPASRFLRENGITLTKVKEES 152
           +++ +AIK   +S+ EAR+L +   GTE +L+GL+ EGT  A++ L+  GI L   + E 
Sbjct: 117 RFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEV 176

Query: 153 IKLLGKGDLYFFSPEHPPITESAQRALDWALDQKLKPDENGEITTIDLLLGVWSEEDSPG 212
            K++G+G    F     P T  A+R L+ +L++  +   N  I +  LLLG+  E +   
Sbjct: 177 EKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGHN-YIGSEHLLLGLLREGEGVA 236

Query: 213 HKILAALGFD 223
            ++L  LG D
Sbjct: 237 ARVLENLGAD 243
[Close]
BLAST of Spo26957.1 vs. TAIR (Arabidopsis)
Match: AT3G45450.1 (Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.300e-6
Identity = 25/67 (37.31%), Postives = 43/67 (64.18%), Query Frame = 1 

		  

Query: 93  KWSGRAIKSFAMSELEARKLKYPTTGTEALLMGLLIEGTSPASRFLRENGITLTKVKEES 152
           +++ +AIK   +++ EAR+L Y   GTE +L+ L+ EGT  A++ L+  GI L   + E 
Sbjct: 4   RFTEKAIKVITLAQEEARRLGYNFFGTEHILLSLIGEGTGIAAKVLKSMGINLKDARVEV 63

Query: 153 IKLLGKG 160
            K++G+G
Sbjct: 64  EKIIGRG 70
The following BLAST results are available for this feature:
BLAST of Spo26957.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902234030|gb|KNA23299.1|2.8e-131100.hypothetical protein SOVF_0261... [more]
gi|902234031|gb|KNA23300.1|1.5e-12999.1hypothetical protein SOVF_0261... [more]
gi|731331395|ref|XP_010676640.1|6.3e-9173.8PREDICTED: clp protease-relate... [more]
gi|661886501|emb|CDP09865.1|1.4e-6663.4unnamed protein product [Coffe... [more]
gi|747040965|ref|XP_011069964.1|1.2e-6557.9PREDICTED: clp protease-relate... [more]
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BLAST of Spo26957.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RWK4_SPIOL2.0e-131100.Uncharacterized protein OS=Spi... [more]
A0A0K9RUU0_SPIOL1.1e-12999.1Uncharacterized protein OS=Spi... [more]
A0A0J8F8H9_BETVU4.4e-9173.8Uncharacterized protein OS=Bet... [more]
A0A068UMV3_COFCA9.9e-6763.4Uncharacterized protein OS=Cof... [more]
A0A061G5N7_THECC3.5e-6458.2Double Clp-N motif protein OS=... [more]
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BLAST of Spo26957.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CLPT2_ARATH9.8e-6059.5ATP-dependent Clp protease ATP... [more]
CLPT1_ARATH7.3e-5552.8ATP-dependent Clp protease ATP... [more]
CLPC2_ORYSJ2.0e-1230.9Chaperone protein ClpC2, chlor... [more]
CLPC1_ORYSJ3.4e-1232.0Chaperone protein ClpC1, chlor... [more]
CLPA_BRANA2.9e-1132.2ATP-dependent Clp protease ATP... [more]
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BLAST of Spo26957.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G12060.15.5e-6159.5Double Clp-N motif protein[more]
AT4G25370.14.1e-5652.8Double Clp-N motif protein[more]
AT5G50920.13.6e-1231.5CLPC homologue 1[more]
AT3G48870.16.2e-1233.8Clp ATPase[more]
AT3G45450.11.3e-637.3Double Clp-N motif-containing ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004176Clp, N-terminalGENE3D1.10.1780.10coord: 93..228
score: 8.9
IPR004176Clp, N-terminalPFAMPF02861Clp_Ncoord: 107..157
score: 2.1E-8coord: 192..228
score: 1.
IPR004176Clp, N-terminalunknownSSF81923Double Clp-N motifcoord: 93..226
score: 1.2
NoneNo IPR availablePANTHERPTHR11638ATP-DEPENDENT CLP PROTEASEcoord: 65..210
score: 4.8
NoneNo IPR availablePANTHERPTHR11638:SF105SUBFAMILY NOT NAMEDcoord: 65..210
score: 4.8

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019538 protein metabolic process
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009058 biosynthetic process
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0042793 plastid transcription
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0048255 mRNA stabilization
biological_process GO:0016556 mRNA modification
biological_process GO:0009902 chloroplast relocation
biological_process GO:0032259 methylation
biological_process GO:0006412 translation
biological_process GO:0009657 plastid organization
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0009651 response to salt stress
biological_process GO:0006457 protein folding
biological_process GO:1901671 positive regulation of superoxide dismutase activity
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0009555 pollen development
biological_process GO:0009451 RNA modification
biological_process GO:0006464 cellular protein modification process
biological_process GO:0006996 organelle organization
biological_process GO:1901135 carbohydrate derivative metabolic process
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0051607 defense response to virus
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0090342 regulation of cell aging
biological_process GO:0051205 protein insertion into membrane
biological_process GO:0045038 protein import into chloroplast thylakoid membrane
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0008380 RNA splicing
biological_process GO:0016043 cellular component organization
biological_process GO:0042794 plastid rRNA transcription
biological_process GO:0009790 embryo development
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0044281 small molecule metabolic process
biological_process GO:0005976 polysaccharide metabolic process
biological_process GO:0006796 phosphate-containing compound metabolic process
biological_process GO:0019637 organophosphate metabolic process
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0009987 cellular process
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0006396 RNA processing
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006508 proteolysis
biological_process GO:0006450 regulation of translational fidelity
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006546 glycine catabolic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009108 coenzyme biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0015031 protein transport
biological_process GO:0006364 rRNA processing
biological_process GO:0006353 DNA-templated transcription, termination
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0006782 protoporphyrinogen IX biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0001522 pseudouridine synthesis
biological_process GO:0043067 regulation of programmed cell death
biological_process GO:0010197 polar nucleus fusion
biological_process GO:0048481 plant ovule development
biological_process GO:0006423 cysteinyl-tRNA aminoacylation
biological_process GO:0006534 cysteine metabolic process
biological_process GO:0042407 cristae formation
biological_process GO:0009658 chloroplast organization
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0006428 isoleucyl-tRNA aminoacylation
biological_process GO:0009791 post-embryonic development
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0019748 secondary metabolic process
biological_process GO:0000304 response to singlet oxygen
biological_process GO:0009416 response to light stimulus
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0019216 regulation of lipid metabolic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0031408 oxylipin biosynthetic process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009579 thylakoid
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0048046 apoplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009536 plastid
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0044435 plastid part
cellular_component GO:0019031 viral envelope
cellular_component GO:0016020 membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0005576 extracellular region
cellular_component GO:0009507 chloroplast
molecular_function GO:0008173 RNA methyltransferase activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0046408 chlorophyll synthetase activity
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004822 isoleucine-tRNA ligase activity
molecular_function GO:0002161 aminoacyl-tRNA editing activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0004853 uroporphyrinogen decarboxylase activity
molecular_function GO:0004817 cysteine-tRNA ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0009982 pseudouridine synthase activity
RNA-Seq Expression