Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AACCAAGGCATTTACTTCCCCAAAATAAATAAATTTCTAATTCTAGCTTTATTTTAATTGAACTTTATATAGCATATACAAAATCAAAATCAAAATCAAAATCAATGGCTTCAAGAATCTTCTTCTCACTTTGTTTGGTATTGGCGTTTGCGCTTTTCACTGAAGCAAAAGATCACCCTGTGGGAGGTACATCAGATGCTTGGAAAGTTCCTTCTCAACCAGATTCTCTCAACAAATGGGCTGAAAGAAGCAGGTTCCAAGTTGGTGATAATCTTGGTAATATTAAGATTAATTTCTCCTATCCTATTTCATTTTCTGTTACTAAATCAATTGTTAGTCAGAAATCCCACCTGGGTTTTATCAATTTTTGTAGAAATTGTAAAAAATATTGCAATTTAGCTCAAAATCTAATCCAGATAATATTCTAACTGAAACTTCATGGGTTTTATTTTATTTAATTATGGCAGTGTGGAAGTATGACAGCAAGAAAGACTCGGTGTTGCAAGTGACAAGGGAGGCATACTTGAACTGCAACACGAGCAGCCCAATAGCGGAGCACAAGGAAGGAGAAACCAAGGTACAATTGGAGAAATCAGGGGCATACTACTTCATCAGTGGAACACAGGCTAACTGTCAGAAGGGAGAGAAGGTGATTGTGGTTGTTATGGGAGCTCGAAGCAGGCGGTCTGGTGCTGATTCTCCAGCTCTTGCTCCTTCTCCTTCTCCTTCTCCGAATTCAGAAGCTGAGGCTCCTACAGTTGCTCGTACAAATGCTGCTTCTGGCCTCAAGAGTGGGGTCATGGTTGTTGTTGGGATCTTGGCTGGGTTTCTTATGATGTGA AACCAAGGCATTTACTTCCCCAAAATAAATAAATTTCTAATTCTAGCTTTATTTTAATTGAACTTTATATAGCATATACAAAATCAAAATCAAAATCAAAATCAATGGCTTCAAGAATCTTCTTCTCACTTTGTTTGGTATTGGCGTTTGCGCTTTTCACTGAAGCAAAAGATCACCCTGTGGGAGGTACATCAGATGCTTGGAAAGTTCCTTCTCAACCAGATTCTCTCAACAAATGGGCTGAAAGAAGCAGGTTCCAAGTTGGTGATAATCTTGTGTGGAAGTATGACAGCAAGAAAGACTCGGTGTTGCAAGTGACAAGGGAGGCATACTTGAACTGCAACACGAGCAGCCCAATAGCGGAGCACAAGGAAGGAGAAACCAAGGTACAATTGGAGAAATCAGGGGCATACTACTTCATCAGTGGAACACAGGCTAACTGTCAGAAGGGAGAGAAGGTGATTGTGGTTGTTATGGGAGCTCGAAGCAGGCGGTCTGGTGCTGATTCTCCAGCTCTTGCTCCTTCTCCTTCTCCTTCTCCGAATTCAGAAGCTGAGGCTCCTACAGTTGCTCGTACAAATGCTGCTTCTGGCCTCAAGAGTGGGGTCATGGTTGTTGTTGGGATCTTGGCTGGGTTTCTTATGATGTGA ATGGCTTCAAGAATCTTCTTCTCACTTTGTTTGGTATTGGCGTTTGCGCTTTTCACTGAAGCAAAAGATCACCCTGTGGGAGGTACATCAGATGCTTGGAAAGTTCCTTCTCAACCAGATTCTCTCAACAAATGGGCTGAAAGAAGCAGGTTCCAAGTTGGTGATAATCTTGTGTGGAAGTATGACAGCAAGAAAGACTCGGTGTTGCAAGTGACAAGGGAGGCATACTTGAACTGCAACACGAGCAGCCCAATAGCGGAGCACAAGGAAGGAGAAACCAAGGTACAATTGGAGAAATCAGGGGCATACTACTTCATCAGTGGAACACAGGCTAACTGTCAGAAGGGAGAGAAGGTGATTGTGGTTGTTATGGGAGCTCGAAGCAGGCGGTCTGGTGCTGATTCTCCAGCTCTTGCTCCTTCTCCTTCTCCTTCTCCGAATTCAGAAGCTGAGGCTCCTACAGTTGCTCGTACAAATGCTGCTTCTGGCCTCAAGAGTGGGGTCATGGTTGTTGTTGGGATCTTGGCTGGGTTTCTTATGATGTGA MASRIFFSLCLVLAFALFTEAKDHPVGGTSDAWKVPSQPDSLNKWAERSRFQVGDNLVWKYDSKKDSVLQVTREAYLNCNTSSPIAEHKEGETKVQLEKSGAYYFISGTQANCQKGEKVIVVVMGARSRRSGADSPALAPSPSPSPNSEAEAPTVARTNAASGLKSGVMVVVGILAGFLMM Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo26843.1 vs. NCBI nr
Match: gi|902192620|gb|KNA12090.1| (hypothetical protein SOVF_129190 [Spinacia oleracea]) HSP 1 Score: 351.3 bits (900), Expect = 1.000e-93 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1
BLAST of Spo26843.1 vs. NCBI nr
Match: gi|731320437|ref|XP_010670805.1| (PREDICTED: early nodulin-like protein 3 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 236.9 bits (603), Expect = 2.800e-59 Identity = 130/178 (73.03%), Postives = 147/178 (82.58%), Query Frame = 1
BLAST of Spo26843.1 vs. NCBI nr
Match: gi|802626135|ref|XP_012076421.1| (PREDICTED: early nodulin-like protein 1 [Jatropha curcas]) HSP 1 Score: 193.7 bits (491), Expect = 2.700e-46 Identity = 99/170 (58.24%), Postives = 134/170 (78.82%), Query Frame = 1
BLAST of Spo26843.1 vs. NCBI nr
Match: gi|590572661|ref|XP_007011908.1| (Early nodulin-like protein 15, putative [Theobroma cacao]) HSP 1 Score: 185.3 bits (469), Expect = 9.700e-44 Identity = 98/169 (57.99%), Postives = 126/169 (74.56%), Query Frame = 1
BLAST of Spo26843.1 vs. NCBI nr
Match: gi|590571854|ref|XP_007011708.1| (Early nodulin-like protein 11 [Theobroma cacao]) HSP 1 Score: 183.7 bits (465), Expect = 2.800e-43 Identity = 93/169 (55.03%), Postives = 128/169 (75.74%), Query Frame = 1
BLAST of Spo26843.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXV7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_129190 PE=4 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 7.100e-94 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1
BLAST of Spo26843.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CTL4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g044020 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 1.900e-59 Identity = 130/178 (73.03%), Postives = 147/178 (82.58%), Query Frame = 1
BLAST of Spo26843.1 vs. UniProtKB/TrEMBL
Match: A0A067KER5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07079 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.900e-46 Identity = 99/170 (58.24%), Postives = 134/170 (78.82%), Query Frame = 1
BLAST of Spo26843.1 vs. UniProtKB/TrEMBL
Match: A0A061GK37_THECC (Early nodulin-like protein 15, putative OS=Theobroma cacao GN=TCM_037037 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 6.700e-44 Identity = 98/169 (57.99%), Postives = 126/169 (74.56%), Query Frame = 1
BLAST of Spo26843.1 vs. UniProtKB/TrEMBL
Match: A0A061GJI7_THECC (Early nodulin-like protein 11 OS=Theobroma cacao GN=TCM_036902 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.000e-43 Identity = 93/169 (55.03%), Postives = 128/169 (75.74%), Query Frame = 1
BLAST of Spo26843.1 vs. ExPASy Swiss-Prot
Match: ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2) HSP 1 Score: 159.5 bits (402), Expect = 3.600e-38 Identity = 90/187 (48.13%), Postives = 127/187 (67.91%), Query Frame = 1
BLAST of Spo26843.1 vs. ExPASy Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2) HSP 1 Score: 127.1 bits (318), Expect = 2.000e-28 Identity = 70/169 (41.42%), Postives = 110/169 (65.09%), Query Frame = 1
BLAST of Spo26843.1 vs. ExPASy Swiss-Prot
Match: NO552_SOYBN (Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.500e-20 Identity = 57/146 (39.04%), Postives = 88/146 (60.27%), Query Frame = 1
BLAST of Spo26843.1 vs. ExPASy Swiss-Prot
Match: NO16_MEDTR (Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.700e-20 Identity = 55/146 (37.67%), Postives = 88/146 (60.27%), Query Frame = 1
BLAST of Spo26843.1 vs. ExPASy Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 8.200e-19 Identity = 61/150 (40.67%), Postives = 87/150 (58.00%), Query Frame = 1
BLAST of Spo26843.1 vs. TAIR (Arabidopsis)
Match: AT5G25090.1 (early nodulin-like protein 13) HSP 1 Score: 159.5 bits (402), Expect = 2.000e-39 Identity = 90/187 (48.13%), Postives = 127/187 (67.91%), Query Frame = 1
BLAST of Spo26843.1 vs. TAIR (Arabidopsis)
Match: AT4G31840.1 (early nodulin-like protein 15) HSP 1 Score: 142.9 bits (359), Expect = 1.900e-34 Identity = 79/170 (46.47%), Postives = 113/170 (66.47%), Query Frame = 1
BLAST of Spo26843.1 vs. TAIR (Arabidopsis)
Match: AT4G30590.1 (early nodulin-like protein 12) HSP 1 Score: 141.4 bits (355), Expect = 5.600e-34 Identity = 86/176 (48.86%), Postives = 112/176 (63.64%), Query Frame = 1
BLAST of Spo26843.1 vs. TAIR (Arabidopsis)
Match: AT5G57920.1 (early nodulin-like protein 10) HSP 1 Score: 135.6 bits (340), Expect = 3.100e-32 Identity = 69/168 (41.07%), Postives = 109/168 (64.88%), Query Frame = 1
BLAST of Spo26843.1 vs. TAIR (Arabidopsis)
Match: AT3G20570.1 (early nodulin-like protein 9) HSP 1 Score: 130.6 bits (327), Expect = 1.000e-30 Identity = 74/154 (48.05%), Postives = 102/154 (66.23%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo26843.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo26843.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo26843.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo26843.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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