Spo26818 (gene)

Overview
NameSpo26818
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionMacrophage migration inhibitory factor family protein / MIF family protein
Locationchr6 : 26048719 .. 26054253 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATAAACATAAATAGAAGGCAGGCCATCACTTTCTTTCACGCTATCATCTAAATATGAATCCGACTTACCGACTTATTACCGCCGTTTAAACGACTCAATCAACATTAAGTTTTCCCACTCCATTGTAACTTAATATTAATCCCAGTACTATTTAAATATCACAAACACACACTCCTCTTCATTCATTCACCCATCCATTTACAAACACTCAAAATCGAGGAGAGAGAAAAACCAGAAANACGAATAAAAGCTGAAAAAAAAAAAAAAAAAAAAATAGAAGATCGATCGGATTGGATTGCGTTAAAATGCCAGCACTGTATATCACTACAAACGTCAACTTGGACGGACTCGATATTGAGCCCGTCTTCTCCGAAGCCAGTGCTGCGGTTGCTACCATTATCGGCCGCCCTCAACATGTAAGTACTTTTTTACGGTTTTACTTTTCTTTCTGATTCATGCCCGATATTTCAATACTTTGATATGATCATTTCAGTCGGAGTTTTTTTTTTTTTTTTCTTCAGTATTCTGGTTTTCTTTCCTAATAGAAAAAGCGAATGTCGTACTAGTCTTTTTTATTATGTTTGGTACAAGTACAACAACATGAATTTCTATTAGAATAATATTGCTGCTTAATAATTGACAAATATTTTTAGATCAGACTGCGATATACATAAAATCGATGATGGTATTAAAAATGTTAATAGTTTGCCATACGTTCGGGCCGTGTGGCTATTGTGAAACGGCAAAAATCAGTTGAATCACAGATTCACAACTTACGCTTGTGTGTTGTGTCATGTGATTAGTTGTTTGGTTGAGAAAATAATACGTGTAACAGAATTTTGCTAGAAGTTGATGGGAAATGTGTAGTGTACAACTTTTTGTACTCCGCATTTCCTAGAAGTTAAATCACACAATTCACAAGGTTTTTACACGTATGACTTTTATGAAATACTCGTACTCTTATGAAAAATGCTACATGTACACCACCATTAATTTATTGACATATCATCAAACCCACTAAAAAATGAGAATGAAAGATATTAAATATGTTATTTCAACCAATAAAAAAGCAAGGTGTATAAGATGTCTTGTACATGTACACTAGGTGTACAAATAGTAGGATCCAACTCTTAGAGCATGTACATTTGGTGGTCCACAATTAATTGTGTTTTTTTTACCAAAGTTACTATCCAATTTTCAAAGTTACTCCCCACTTTTCAACAAGAATCAACTCTTGAAGGGCTCTTGGGCAAGAGCTACCTTGAAATAGCTCTCCATAAAGAGTTACCCAAGAGCCCCTCAAGAACCACTCAAGAGCCCCAATATTGGCCAAGAGATAGTTCTTGCTGGAGATAGTTCATGTTGGAGAGCTACTTAGAGAGTTACTTGGAGAGTCACTCCAAGAGCCCCAATGTACATGCTCTTATGTTCAACCAAAAATTACCCAGGTTTCGAAAAATGTATTTAATTATTTAAGTCATTTTCGATTAGGGGTTGATTTGTATATTTGGGCAAGTAGTTAAAATTTCGTAAAGGGTCATTTAAGTTGCAACTTACAATAACATGTGTACTTGGTATTGAACAAGTCTAGTAGTTACGCCACGGAGTATCTTCTAAGAGGTTGGTGAGCTTTCTCATTTAAGAATTAAGAGTAGTACTTGGTATTGAACAAGTCAAGTACATATGTAAAGTTGTGAACCTAACTTAATTATAAAAAGTCTGTGCCATACGCCCATGAACAAACTATTAGAAAACAAATTCATTCGGCACATGCATGTGTATAAGGAGTGTGCAATGCGTGTCTCAAATTAAGTGATAGAGTCATAGAAGTTGGTCGTGTATCCATGGAGGTCGATTTACAATCGATTCCTATTTATATATTGTGTAATGGTTGGGTAAGTCCAACTTCAAAGCAAAGAGTTGTCACATGTGGAGTACTATTAAAATTGAATGTCTATTTAATTTAATATAGAGATTTCTCTAATTTTTTTTTTAAATGACACAATTATTTAGGCACGTTTGCCAATGCACAATTTCAAATATTATTATTTTTAATTATGGCTAAGAAAAACTTATAAAAAGTTGATATTTAAAAAATATTTATTGAGACGAATCGAATAAAACCTCACACAATTATGATTTTTCTTAAGTATAAATTACAAAAAGTAAGTCAAATGAGTTTGTGTTAATAGTGTCCAAAATCCAATGTGTCATGTAAATAAGAACAGAAGAAGTAGTAAGGCTATAAGGTACTCCCTCCGTTTCTTTTTGTTTGTTACGTATTCCTTTTAGGGTGTTTCATAATGTTTGTTACGTGGGAGAATCTTTCCATTTATAAACTTATTATACTATCATTTTTTGTGCCAACTTTTAATTTTAATTGGTCCAATTTTTTCAACTCATTAATTTTCTTTACAATTTTCCAAGTATGTTAAGGTAGCAATCTTTGTGCTTTTCTATTGTTGGTTCATTTAGATAAATAAAACAATCTTATTGGTTGTTGTAATGATTAGTGGATTGAGATTTTATTTGCGTTTATTTTTTGAATAAAAAATAAAAAGAATCTTTATCATACGTTAATAAATGTGTAAAAGTCCAAACGTAACAAAAAGAAACAGAGGGAGTACATAAAACTGTTTCACTGATTATTGATCACATGCCTAAACTTTCTAGGGAATATACGTAGTTATTCAAATAAATGTTACCGTCTTTTTATGATAATTAATACGAGACCGTGCAGTTACTTCGTAGGTGATATTGCACCGTAGAATACTCTGTATATTTTTACTATAGTAGTCACCGTAGAATATCAATGCTACATGGAGTACTATGTATGTTAATATGATATTTAGTCATATTAACACTATACCGAGTATTAAATTTAAATTTGATTAGTATAGTTAGTATAATTTAACTTTTTTTTTTTTTGAGGTAATTGTATAATTTAATTTGACACAATGATTTTTTTAAGGTGAAGTAATATGTGATTGAGGTCTATATTTTTCTAGTGCGTTTGAATGATCCAGGAGACTATTATAAATCACAAATTATAAATGAGAGAAAAGAAGATTTAAATGTGTGACTTATCATACATGTGCATACATTCATTTTTTTACCACTTGGCCGATATTTCATTGACACATATATCTCTGTGTATAAAAAGGTGATCCATAAATGTATAGTCTCAATTACCAGAAAGTATAACCCTACTCTTTATAACGTCCATATCGTTTGTTTTAAGTTGAGAGCAAACGAGTGGTTACCATATAGCTAGGGGTCGGATCACTTGGGTGGGTGTTGGGTTAGGAGTCAATTGTATTCCCACTCAATATAACCCCATTGCTTATCCAGTTTCCATCCATCATACATATGATTCTCTACATCATTATTTCTCTTATTTCAAATGTAAAAATAAGCCAAATTTATGAAAGATGGATTTTATTATGAGTTGTCGTACATATTTTTTAACACGCATGGACTATGCACAATTTAATCATAAAGTCCTGGACTTGATAATTTCTTGGAATAAAATTGATGAACCTCGCTGAACCTTATCCAAGTCCATCCCAAACGTGACCGAGTACAAGCTAATCATAACTAGTTTTGCTACATATTTTTGATGCGACTCTAGTTTTGCTACATGCTACTACGTACATACAACGATACAAGCTTAGTAGATTTCCATCTTATGAGTTTATCATCCTTGTATCTCTTCAAAATACACGAAATAACTTAATCCTGATTTATATTTGAGTTATGTTACGTATTTCACTATTTTGGTAACACGTAAGTACGTTGTAACGGGACATATGTGAATCTATATGGAGTGTTTGGTTGTTAGTAAATGAAAGTGGTTGGGTGCACTTTATTCTCCACTAGAGCACTAAGAATCTGAGACTGTATCACGTACCATGCTTACAGCCTTACACCTCTACAGCTCTACTCATTATTCAACAATCATCACTGTTGCTTACTTGATCGGAAACCACCATGACCTTTTTCTTTGAACCCATGATTGTTAATATTGTGGCCATTTGGCTATGTGGGGCCCATTTTTGGCTGAATTAACACCACTATTCTTGGCTAGCTTTGAGAGTCACAGAGTGTGAGGGAAAACAGAAGAGATAAATTTAGAACAACATCCAATACCTTAAGTTAATACTCCGTAGAGTATAATTGTGCCCCCCACATCGCTTTTTTGTTTTAAATGATAAAGAGTATGAATTTGGCCTATTATCATTCCTAACTACTCAAAACTAATGTTGGGTTTTCTTTCGTCCCTCTGTCCTAAAATTACAGTCATGTTTTTCAAATCGGGCGTTTCAAAATTATAGTTTTGTTTCTAATTTTGGCTATTTAGGTCTCCATCTTCTCACGGAGTACTTTATTAATTAAAAATGCATTAAAAACCTCACTCTTGTACTATATTCCACTTTTTTATGTACTATATTATCTTTACAATATACTTTATTCTACTCTTTCATCCAACTCAATCATCATTTGTACTTTATTCTACTTTTCTACGTATTATATTCTATTTTTCTTAAAACTCGTATTCTTGATCAAACGGGACTGTAAATATAAGACGGAGGGAGTACAATTTAGCCAAGCCACTTTAGTTGTTTTCAATGTCTCTAAGCTATATGGTCCCTTCCCTTTTTTTATCAGTAAGATGTACCAATTGGCATCATATTGTCGTTTTATTAACTATCTACAACGACCCAAACGGAGACAATGACCCTAAAAAGTCAACTTTATTCCTAACACCAAAATCATACGGAGTATTAATTTATTCTCCCAAAAAATCAATTTTATTCCTAACGCCAAAAAATGGTTTGATGGATTATAATTCGTCAGACCAAGTACAAGTTAAACAAAAACGATTGAAAATATTTGATCATATCGACTGACAAATACTTGTTATTTTTTAATTTTAATTTTAATTTGCAGTTGGTAATGGTGGTGGTGAAAGGATCAGTTCCAATATCATTTACAGGAACAAAGGAGCCAGCAGCATTTGCACAGTTAATATCAATGGGTGGAATTAACAAAGTAGTGAAGAAAAACTTGATAAAAAGTCTAGGTGCCATCCTTGACAATCATCTTTCAATCCCTCCTGCTAGATTTTTCTGCCATGTTGTTGATACTACTGCTGGTCGCCCACAATCTAAGCTTTGATTTTTATTTTTATTATTGTAAACTTATTTGATTTTCCAATTTAATTAAATCTACCAATTTGGAAGATTGTTAAATTTAGTTGTTAGTTTAATTTTCATCTGGAAGATTGTTAAATTAGTGGCCCCTTTCAGTGGCCTTTCTCAATATTAAGATGAAATTCTCATATACGACGGCGTGTTGTATGCAACATGAATCATCGCAAATCATGTAAAAGTCGTCTCCGTATAAGAGAGTGTTAATTTGTGATTTGGCGGGTTTTTTTTAAACTGTGATGATGTAATAGAAAGTTTAATCACTTGATGCAGTCCAAGTATTCAAATATACAATAGTACCATTTTTCATCTCATACACTGAC

mRNA sequence

AAATAAACATAAATAGAAGGCAGGCCATCACTTTCTTTCACGCTATCATCTAAATATGAATCCGACTTACCGACTTATTACCGCCGTTTAAACGACTCAATCAACATTAAGTTTTCCCACTCCATTGTAACTTAATATTAATCCCAGTACTATTTAAATATCACAAACACACACTCCTCTTCATTCATTCACCCATCCATTTACAAACACTCAAAATCGAGGAGAGAGAAAAACCAGAAANACGAATAAAAGCTGAAAAAAAAAAAAAAAAAAAAATAGAAGATCGATCGGATTGGATTGCGTTAAAATGCCAGCACTGTATATCACTACAAACGTCAACTTGGACGGACTCGATATTGAGCCCGTCTTCTCCGAAGCCAGTGCTGCGGTTGCTACCATTATCGGCCGCCCTCAACATTTGGTAATGGTGGTGGTGAAAGGATCAGTTCCAATATCATTTACAGGAACAAAGGAGCCAGCAGCATTTGCACAGTTAATATCAATGGGTGGAATTAACAAAGTAGTGAAGAAAAACTTGATAAAAAGTCTAGGTGCCATCCTTGACAATCATCTTTCAATCCCTCCTGCTAGATTTTTCTGCCATGTTGTTGATACTACTGCTGGTCGCCCACAATCTAAGCTTTGATTTTTATTTTTATTATTGTAAACTTATTTGATTTTCCAATTTAATTAAATCTACCAATTTGGAAGATTGTTAAATTTAGTTGTTAGTTTAATTTTCATCTGGAAGATTGTTAAATTAGTGGCCCCTTTCAGTGGCCTTTCTCAATATTAAGATGAAATTCTCATATACGACGGCGTGTTGTATGCAACATGAATCATCGCAAATCATGTAAAAGTCGTCTCCGTATAAGAGAGTGTTAATTTGTGATTTGGCGGGTTTTTTTTAAACTGTGATGATGTAATAGAAAGTTTAATCACTTGATGCAGTCCAAGTATTCAAATATACAATAGTACCATTTTTCATCTCATACACTGAC

Coding sequence (CDS)

ATGCCAGCACTGTATATCACTACAAACGTCAACTTGGACGGACTCGATATTGAGCCCGTCTTCTCCGAAGCCAGTGCTGCGGTTGCTACCATTATCGGCCGCCCTCAACATTTGGTAATGGTGGTGGTGAAAGGATCAGTTCCAATATCATTTACAGGAACAAAGGAGCCAGCAGCATTTGCACAGTTAATATCAATGGGTGGAATTAACAAAGTAGTGAAGAAAAACTTGATAAAAAGTCTAGGTGCCATCCTTGACAATCATCTTTCAATCCCTCCTGCTAGATTTTTCTGCCATGTTGTTGATACTACTGCTGGTCGCCCACAATCTAAGCTTTGA

Protein sequence

MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAFAQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGRPQSKL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo26818.1Spo26818.1mRNA


Homology
[Close]
BLAST of Spo26818.1 vs. NCBI nr
Match: gi|902231787|gb|KNA22405.1| (hypothetical protein SOVF_034250 [Spinacia oleracea])

HSP 1 Score: 222.6 bits (566), Expect = 3.400e-55
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

		  

Query: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60
           MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF
Sbjct: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60

Query: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGRPQSKL 113
           AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGRPQSKL
Sbjct: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGRPQSKL 112
[Close]
BLAST of Spo26818.1 vs. NCBI nr
Match: gi|731331764|ref|XP_010676833.1| (PREDICTED: macrophage migration inhibitory factor homolog [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 196.4 bits (498), Expect = 2.600e-47
Identity = 97/112 (86.61%), Postives = 105/112 (93.75%), Query Frame = 1 

		  

Query: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60
           MPAL ITTNV LDG+D+EP+FSEA+AAVA+IIGRPQHLVMVV+KGSVPISFTGTKEPAAF
Sbjct: 1   MPALNITTNVKLDGVDVEPIFSEAAAAVASIIGRPQHLVMVVLKGSVPISFTGTKEPAAF 60

Query: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGRPQSKL 113
           AQLISMGGI+KVVKK LIKSLG IL+ HLSIPP RFFCHVVDTTAGR QSKL
Sbjct: 61  AQLISMGGIDKVVKKKLIKSLGIILETHLSIPPTRFFCHVVDTTAGRQQSKL 112
[Close]
BLAST of Spo26818.1 vs. NCBI nr
Match: gi|255571477|ref|XP_002526686.1| (PREDICTED: macrophage migration inhibitory factor homolog [Ricinus communis])

HSP 1 Score: 156.4 bits (394), Expect = 3.000e-35
Identity = 73/107 (68.22%), Postives = 92/107 (85.98%), Query Frame = 1 

		  

Query: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60
           MP LYI+TNVNLDG+D +P+FSEA+ AVATIIG+P+H VMV++KGSV ISF G KEPAA+
Sbjct: 1   MPCLYISTNVNLDGVDTDPIFSEATKAVATIIGKPEHFVMVILKGSVGISFNGNKEPAAY 60

Query: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGR 108
           A+++SMGGIN+ VK+NLI +LG +L+N LSIP ARFF  V DTTAG+
Sbjct: 61  AEVVSMGGINREVKRNLISTLGTVLENRLSIPRARFFLKVYDTTAGQ 107
[Close]
BLAST of Spo26818.1 vs. NCBI nr
Match: gi|593264924|ref|XP_007134640.1| (hypothetical protein PHAVU_010G064100g [Phaseolus vulgaris])

HSP 1 Score: 152.1 bits (383), Expect = 5.600e-34
Identity = 71/112 (63.39%), Postives = 92/112 (82.14%), Query Frame = 1 

		  

Query: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60
           MP LYI+TN+NLDG++I+P+FS+A+ AV+TIIG+P+  VMV++KGSVPISF G KEPAA+
Sbjct: 1   MPCLYISTNINLDGINIDPIFSQATTAVSTIIGKPEKFVMVILKGSVPISFEGNKEPAAY 60

Query: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGRPQSKL 113
           A+++SMGGIN  VKKNLI S+G IL  +LSIP  RFF  V DTT  R +SK+
Sbjct: 61  AEIVSMGGINSEVKKNLIYSIGTILQTNLSIPRTRFFLKVFDTTVFRTKSKM 112
[Close]
BLAST of Spo26818.1 vs. NCBI nr
Match: gi|1012023803|ref|XP_015950484.1| (PREDICTED: macrophage migration inhibitory factor homolog [Arachis duranensis])

HSP 1 Score: 151.4 bits (381), Expect = 9.600e-34
Identity = 70/112 (62.50%), Postives = 93/112 (83.04%), Query Frame = 1 

		  

Query: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60
           MP LYI+TNVNLDG++++P+FSEA++A++TIIG+P+  VMV++KGSVPI+F G KEPAA+
Sbjct: 1   MPCLYISTNVNLDGINLDPIFSEATSAISTIIGKPEKFVMVILKGSVPITFEGNKEPAAY 60

Query: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGRPQSKL 113
           A+++SMGGINK VKK LI ++G IL + LSIP  RFF  V DTTA R  SK+
Sbjct: 61  AEIVSMGGINKEVKKKLIATIGTILQSKLSIPRTRFFLKVFDTTAFRSNSKM 112
[Close]
BLAST of Spo26818.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RS80_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_034250 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.400e-55
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

		  

Query: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60
           MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF
Sbjct: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60

Query: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGRPQSKL 113
           AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGRPQSKL
Sbjct: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGRPQSKL 112
[Close]
BLAST of Spo26818.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CK16_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g103450 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.800e-47
Identity = 97/112 (86.61%), Postives = 105/112 (93.75%), Query Frame = 1 

		  

Query: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60
           MPAL ITTNV LDG+D+EP+FSEA+AAVA+IIGRPQHLVMVV+KGSVPISFTGTKEPAAF
Sbjct: 1   MPALNITTNVKLDGVDVEPIFSEAAAAVASIIGRPQHLVMVVLKGSVPISFTGTKEPAAF 60

Query: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGRPQSKL 113
           AQLISMGGI+KVVKK LIKSLG IL+ HLSIPP RFFCHVVDTTAGR QSKL
Sbjct: 61  AQLISMGGIDKVVKKKLIKSLGIILETHLSIPPTRFFCHVVDTTAGRQQSKL 112
[Close]
BLAST of Spo26818.1 vs. UniProtKB/TrEMBL
Match: B9SL17_RICCO (Light-inducible protein atls1, putative OS=Ricinus communis GN=RCOM_0848460 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.100e-35
Identity = 73/107 (68.22%), Postives = 92/107 (85.98%), Query Frame = 1 

		  

Query: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60
           MP LYI+TNVNLDG+D +P+FSEA+ AVATIIG+P+H VMV++KGSV ISF G KEPAA+
Sbjct: 1   MPCLYISTNVNLDGVDTDPIFSEATKAVATIIGKPEHFVMVILKGSVGISFNGNKEPAAY 60

Query: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGR 108
           A+++SMGGIN+ VK+NLI +LG +L+N LSIP ARFF  V DTTAG+
Sbjct: 61  AEVVSMGGINREVKRNLISTLGTVLENRLSIPRARFFLKVYDTTAGQ 107
[Close]
BLAST of Spo26818.1 vs. UniProtKB/TrEMBL
Match: V7AMD5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G064100g PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.900e-34
Identity = 71/112 (63.39%), Postives = 92/112 (82.14%), Query Frame = 1 

		  

Query: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60
           MP LYI+TN+NLDG++I+P+FS+A+ AV+TIIG+P+  VMV++KGSVPISF G KEPAA+
Sbjct: 1   MPCLYISTNINLDGINIDPIFSQATTAVSTIIGKPEKFVMVILKGSVPISFEGNKEPAAY 60

Query: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGRPQSKL 113
           A+++SMGGIN  VKKNLI S+G IL  +LSIP  RFF  V DTT  R +SK+
Sbjct: 61  AEIVSMGGINSEVKKNLIYSIGTILQTNLSIPRTRFFLKVFDTTVFRTKSKM 112
[Close]
BLAST of Spo26818.1 vs. UniProtKB/TrEMBL
Match: B9HD81_POPTR (Macrophage migration inhibitory factor family protein OS=Populus trichocarpa GN=POPTR_0006s10570g PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 8.700e-34
Identity = 75/112 (66.96%), Postives = 90/112 (80.36%), Query Frame = 1 

		  

Query: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60
           MP LYI+TNVNLD +D +P+FSEA+ AVATIIGRP+HLVMV++KG V ISF G KEPAA+
Sbjct: 1   MPCLYISTNVNLDDVDKDPIFSEATKAVATIIGRPEHLVMVILKGLVAISFNGNKEPAAY 60

Query: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGRPQSKL 113
           A+++SMGGI K VK+NLI +LG IL+  LSIP ARFF  V DTTA    SKL
Sbjct: 61  AEIVSMGGITKQVKRNLIATLGTILEAKLSIPRARFFLKVYDTTAAGNSSKL 112
[Close]
BLAST of Spo26818.1 vs. ExPASy Swiss-Prot
Match: MIFH_TRITR (Macrophage migration inhibitory factor homolog OS=Trichuris trichiura PE=1 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 9.000e-8
Identity = 32/102 (31.37%), Postives = 52/102 (50.98%), Query Frame = 1 

		  

Query: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60
           MP    +TNV  + + ++      S  +A ++G+P+  V V + G   I+F GT  PA F
Sbjct: 1   MPIFTFSTNVPSENISVD-FLKSTSKLIAGMLGKPESYVAVHINGGQKITFGGTDAPAGF 60

Query: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVD 103
            QL+S+GG+     ++    L   L + L IP  R + + VD
Sbjct: 61  GQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMYINFVD 101
[Close]
BLAST of Spo26818.1 vs. ExPASy Swiss-Prot
Match: MIFH_TRISP (Macrophage migration inhibitory factor homolog OS=Trichinella spiralis PE=1 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 1.700e-6
Identity = 33/97 (34.02%), Postives = 48/97 (49.48%), Query Frame = 1 

		  

Query: 7   TTNVNLDGLDIEPVF-SEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAFAQLIS 66
           T N N+   D+   F S  SA V  I+ +P   V V +     +SF G+ +PAAF  L+S
Sbjct: 5   TLNTNIKATDVPSDFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTKPAAFGTLMS 64

Query: 67  MGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVD 103
           +GGI     ++    L   L+  L IP  R + H V+
Sbjct: 65  IGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMYIHFVN 101
[Close]
BLAST of Spo26818.1 vs. TAIR (Arabidopsis)
Match: AT3G51660.1 (Tautomerase/MIF superfamily protein)

HSP 1 Score: 127.9 bits (320), Expect = 4.000e-30
Identity = 64/112 (57.14%), Postives = 82/112 (73.21%), Query Frame = 1 

		  

Query: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60
           MP LYITTNVN DG++ +P +SE + AVA+I+GRPQ+LVMVV+KGSV I F G KE AA+
Sbjct: 1   MPCLYITTNVNFDGVNTDPFYSEVTKAVASIVGRPQNLVMVVLKGSVEIVFGGNKEAAAY 60

Query: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDTTAGRPQSKL 113
           A+++SMGGI K VK+ LI ++G+IL  H SI P RF   V D  +    SKL
Sbjct: 61  AEIVSMGGITKQVKRELIATVGSILHTHFSIHPTRFIFKVFDINSLPLPSKL 112
[Close]
BLAST of Spo26818.1 vs. TAIR (Arabidopsis)
Match: AT5G01650.2 (Tautomerase/MIF superfamily protein)

HSP 1 Score: 117.9 bits (294), Expect = 4.100e-27
Identity = 55/103 (53.40%), Postives = 78/103 (75.73%), Query Frame = 1 

		  

Query: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60
           MP L ++TNVNLDG+D   + SEAS+ VA IIG+P++ VM+V+KGSVP+SF GT++PAA+
Sbjct: 1   MPCLNLSTNVNLDGVDTSSILSEASSTVAKIIGKPENYVMIVLKGSVPMSFGGTEDPAAY 60

Query: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDT 104
            +L+S+GG+N  V K L  ++ AIL+  LS+P +RFF    DT
Sbjct: 61  GELVSIGGLNADVNKKLSAAVSAILETKLSVPKSRFFLKFYDT 103
[Close]
BLAST of Spo26818.1 vs. TAIR (Arabidopsis)
Match: AT5G57170.2 (Tautomerase/MIF superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 2.300e-17
Identity = 41/103 (39.81%), Postives = 65/103 (63.11%), Query Frame = 1 

		  

Query: 1   MPALYITTNVNLDGLDIEPVFSEASAAVATIIGRPQHLVMVVVKGSVPISFTGTKEPAAF 60
           MP L + TN+ +D +    +  +A+ AVA IIG+P+  VM+++   VPI+F GT+EPAA+
Sbjct: 1   MPTLNLFTNIPVDAVTCSDILKDATKAVAKIIGKPESYVMILLNSGVPIAFAGTEEPAAY 60

Query: 61  AQLISMGGINKVVKKNLIKSLGAILDNHLSIPPARFFCHVVDT 104
            +LIS+GG+   V   L +++  IL   LSI  +RF+    D+
Sbjct: 61  GELISIGGLGPGVNGKLSETISEILQIKLSIDSSRFYIKFYDS 103
The following BLAST results are available for this feature:
BLAST of Spo26818.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902231787|gb|KNA22405.1|3.4e-55100.hypothetical protein SOVF_0342... [more]
gi|731331764|ref|XP_010676833.1|2.6e-4786.6PREDICTED: macrophage migratio... [more]
gi|255571477|ref|XP_002526686.1|3.0e-3568.2PREDICTED: macrophage migratio... [more]
gi|593264924|ref|XP_007134640.1|5.6e-3463.3hypothetical protein PHAVU_010... [more]
gi|1012023803|ref|XP_015950484.1|9.6e-3462.5PREDICTED: macrophage migratio... [more]
back to top
BLAST of Spo26818.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RS80_SPIOL2.4e-55100.Uncharacterized protein OS=Spi... [more]
A0A0J8CK16_BETVU1.8e-4786.6Uncharacterized protein OS=Bet... [more]
B9SL17_RICCO2.1e-3568.2Light-inducible protein atls1,... [more]
V7AMD5_PHAVU3.9e-3463.3Uncharacterized protein OS=Pha... [more]
B9HD81_POPTR8.7e-3466.9Macrophage migration inhibitor... [more]
back to top
BLAST of Spo26818.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MIFH_TRITR9.0e-831.3Macrophage migration inhibitor... [more]
MIFH_TRISP1.7e-634.0Macrophage migration inhibitor... [more]
back to top
BLAST of Spo26818.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT3G51660.14.0e-3057.1Tautomerase/MIF superfamily pr... [more]
AT5G01650.24.1e-2753.4Tautomerase/MIF superfamily pr... [more]
AT5G57170.22.3e-1739.8Tautomerase/MIF superfamily pr... [more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001398Macrophage migration inhibitory factorPRODOMPD004816coord: 20..103
score: 4.0
IPR001398Macrophage migration inhibitory factorPANTHERPTHR11954MACROPHAGE MIGRATION INHIBITORY FACTOR RELATEDcoord: 2..105
score: 1.0
IPR001398Macrophage migration inhibitory factorPFAMPF01187MIFcoord: 2..103
score: 9.8
IPR014347Tautomerase/MIF superfamilyunknownSSF55331Tautomerase/MIFcoord: 1..104
score: 4.64
NoneNo IPR availableGENE3D3.30.429.10coord: 1..104
score: 5.7
NoneNo IPR availablePANTHERPTHR11954:SF25LS1-LIKE PROTEINcoord: 2..105
score: 1.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0051510 regulation of unidimensional cell growth
biological_process GO:0009414 response to water deprivation
biological_process GO:0010343 singlet oxygen-mediated programmed cell death
biological_process GO:0010118 stomatal movement
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0010264 myo-inositol hexakisphosphate biosynthetic process
biological_process GO:0055085 transmembrane transport
biological_process GO:0050794 regulation of cellular process
biological_process GO:0009733 response to auxin
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0009637 response to blue light
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0016311 dephosphorylation
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0016310 phosphorylation
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0006457 protein folding
biological_process GO:0006508 proteolysis
biological_process GO:0009408 response to heat
biological_process GO:0009644 response to high light intensity
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0010155 regulation of proton transport
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0046283 anthocyanin-containing compound metabolic process
biological_process GO:0006661 phosphatidylinositol biosynthetic process
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0044238 primary metabolic process
biological_process GO:0071704 organic substance metabolic process
biological_process GO:0044237 cellular metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0009987 cellular process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0010617 circadian regulation of calcium ion oscillation
biological_process GO:0009785 blue light signaling pathway
biological_process GO:0009640 photomorphogenesis
biological_process GO:0006281 DNA repair
biological_process GO:0009583 detection of light stimulus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0016020 membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0010287 plastoglobule
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008967 phosphoglycolate phosphatase activity
molecular_function GO:0008531 riboflavin kinase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0003919 FMN adenylyltransferase activity
molecular_function GO:0003779 actin binding
molecular_function GO:0010181 FMN binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0020037 heme binding
molecular_function GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0009882 blue light photoreceptor activity
molecular_function GO:0003913 DNA photolyase activity
RNA-Seq Expression