Spo26693 (gene)

Overview
NameSpo26693
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_03662 : 16331 .. 20451 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCCCTTCCCCGGTTTTCTTTTTTGCCAACCCCTTAACCATCCGCCGTTTCCATAGTTCAGTTACAGATCAAAGAAAAATTCATGGTCTCATCTTCAGTCACTCCTATAACTCTGATAGCGCACTAGTACATACTCCGGCGAGAATCTTCAGGCTGGTGGGTTGGCGGATTTCGGCGATGCTTTGCGATTGTGCAGTCTGCTGGTGGGCGGTGGCGATGACGAGGAGAGGTATGATGAAGGAAGGAGACTAGGAAAGAGAAAGAAGTGTAATGGGAAATTGCTTGGCTGTTTGTCACTGGAATTTTCCGATGATTAATTGTGCCCAGTTAGGTAATTCATATATGTCCATAATATTCATTAATGGAGTTTCGCCGTTTCCTTCAATTTTCTCATACTTTCTTCTTATTTGAGTTTATTTGTTTCAATTGATTTTTCTGCAATAGAATATATACCGAGTAGTTTAGTTTAAAGTCCATGTTAACTAGATAGTTCTTTAATTTGAATGATTTAGATTGTTTCATTGTCCAAATTATTGATTTCCATTGCTAATTTCTTACCTTAAAAATTAGGCAGGATGATGTTGGAAAAACCTAATTCTGCAGATTATAATTTTCCCTTTAATATTATTGCCTCGATTTATTTTTTGTTCGAAATTATAATTTAACCCCATTTTTGAATTATGAGCAATGTTTACGAGGTTAATTCAATTCGAGGAATTTCTTTTGCTTCCATGGACTATAATGAATGCATTTGTTTTACTGTTACCCATATATTTTATGATTCTGTACGTCCACCGTAGACATTTCATCTTGTGTCATTTCTGCGGTGATTAGAATATGACCTTAAGAGTATATGTTATGAAGTGGTATGCGCTAAAATTCGAAGTCGTTATTATACAGATAATTTAATTTCTTAATGATCACTATATGTCATTTGATTAGAATATGATCCAGCATTGAGGATTTCTCAGAAGTATGGCTGCCAACTAGGAGTAGTGCAAATTTCATTCAAGAACATTATTGTCTGCTACCAACTGTTGTTACCTGCATTTATAGTCTTTTACCTCTCACTAACACAATAAGTGATTAAGCTTTGGATCTTTTCATCATTGTTATAATAGTATCCATTAACTAAATATTTGGATGTATTATATCAGACTTTTAATACACAATTAGTAATGCTGACCATATTTTTTGTATTTGAAGTTTTTAGTTTTTTTTTTTAATCTTTTTATCATGAGTACCTACACTCTCTTATTCAGGATTTGAGAGTCCAAGGCATTATCTGATTGGATTTTGTGTTTCCCTGTTTTAGTGAAATCCTAGTTGGATCATGATATAATCAATCAAGTGGTTCTTAGGCCGTCTACAACTCATCCTTCACACTGTCAGCTTCATCCTTATTCGATCTCAAGCTCCTATGCCTTATCTTCTTGCTCAACTGTTGCATCAGGGTTGATGCTAAAGCTAGACTTTGCAGAATCATATATACGACAAACAAAATCCTTAAGGTCATCCAAATAGAAGCCACTGTCAAAGAGAGATGTCTGGTGCATGAGCCGTGTTGTCAGGTACACGAACTATTAGAATTTGTTTCAGGAAAGCCATATATTTATGTCTGATTTCAGGATAAAGTCCCTGTGTTCAGAATTTCAAACCACAGTTGGTCAAATACTTGGATATGTACCTATACAAGACACTGGTCAGGTTACCTAAAAAAGATGGTGGCTTGATTGGTCTGATGGGTAGAAAGATGTACTACAATTAAGGGGTATTATACGATTAAGGTTAAAGGTCAGAAACTTGATTTGAGTGGGTTTTAGCTAAATGGCAATGGTGCTTGTAATTTGTGACGTTATTTATAGCCTCATTCCATCCTATCTCTTTTAATTAATGGTTGAACTTTGTCCATTCTCAGATCAATTAGCTTAGTTGAACATTAGTGTAAGCTCACCTCTTAATATAATTAGAAAACTGATTTTAGAGTTTGCCAGAGTTCCTATCAGAATTCTGTGTATTTGAAGTATCAATCTTTATTTCAAGAAGGCGATCGTTGTGCTTTTGTTTGATTGCCAGCTTCCTTTCCTTGTTTCTCTGATATTGTGGGGGTGTTTAGTGGATGATTGATGAAGAAAAGGGAAGAAGACACGTTTATTAGAGAGAATGAAAAGGTAGAACTGAGTAATTATAAATGAAAGAATTAAAAAGTAAAACAAAATAAAAAAAATTAACCAAAACTGCCACGTCATACTTGTCACCCATTGTAACCGGTCAAAATTTATTGCAACTTGTTAATAATACATGGGTATAAAAGGTAGACTTATTCAGATATAATCGAAAGTTTGACTTATTTTTAGTAGACATGTCAAAGGTTGACTTGTTAATATTGGTTTTATGTAGGTCTCCTTCTATTAAGGTGCTGAATATGTGGGTAATGTATGATAGTTTTAAGAATTAAGGTTTTGGTTTAGTAAAATTTTGGAGGTTTTTGTTATAGAATGAACAATGTGAACTAGCTGTTATCACTATATTCTCTACAATTTGATTAAATAGTTTTTCTAATTATTAGTTACATAGTTCAGTACTTCAGTGGTGTATTTATTGCTAACAAAAATCATGTATTACGAATATACAAGTATCTTGGTGTATTCTGGTATTTTTCTTGTAGGATCTACAAGTATCTAGGTATTATAATTTCCTAAATAATATTGTTATCCTCAATACACTAGTCCTGCCACTTCATGCCTTAGATTTACCTATGTTAATGTGAAGGCTGTGCCCAATGATATTTATCTAAAAGAGAAGGAAGAGGCTACCGAAACAAGTAGAAGTGGTTGGCAAGATATAGATGGTAAGGGAACGGGAGTCATTTTGAGCCATGAAAAGCTTTCGGAACATGTATCCTTTTGTTTTAAGACTGTTTTGTGCTTTGTGCTTTTTGGTGTTCTCTTGACCTTTTAACTATTTAGTAGTCTAGAAATTATTTTGGTTTAATAATTATTTCGCAGGTACTACCTTCCTATTGAATACCATGGGCATGCATCTTCTGTTGTCATCTTTGGAACTGATATAGTGAGACCAAGGTCTGATTTTAGTTGTTTCTTTTTCCTTCTCGTTCCCCCCTTCGTTTATTGATTCTCTATTTGCTCTGAGCAATATATGTTATTGCAGTGATATAGAGTATTTCCTAGTATGTCTGTCAAATGTGGTACTTAAATTGGTTTCATTTTGCTCATATGTTTCATGCTGATATGCTTATCTGGATACAAGCTACTTACTTGCAGTTGTCGTTAGCTAGCTGCATTTATTTAGTTCTTCCTCTCTGACCCATCTCTGTGACTATGGATGTCTTACATTTTATTTTTATTATATTGAACTAATAATTTTGTTTCTTTTCCCAGGGGGCAGGGACCTCCAACTCCTAATTCTCCACCCCCTTACTTTAGACCTTCGCACAAGTAAGACTATGAGCTAGAAATGGTATGAGCCGTAACTCTCTTCTCGTATTTTACATTATGCATGTATTGTTGACAAAGTTTAGGAGAGCATACACAGAGCTATATATTTTACTAAGGTGTCCTACTTTTGTAGCTAAAATGCCCATATTTTAAAATATATGGTAGACCCTTATATGCAGTCTTGTGTCTACCATCTGAAAGTATGAGTGGATTTTGCATATTCTAATTTTGAATTATAAGCAACAGATTATGGATGTTAACTTTAGTTCTTGTAATGCAATGTCTTGGTTGTGCTTTACATGTTTATGGATGTTGGACCTTACTAATTTTATACTTCTTATAGGATCAAGATGATGGATTGGATCGGATAGCAAATGAAGATTAAAGTTGACATTGAGAATCATGCAGACGTAAGGGAAATCAGTTGAAGATGAAAAGATAGGAGACATTTAGTTTTGGATTATATATTTTAGTTTTGGGTATGATCATTTGATTTTATTTTGAACATAATAATGTAATTTTCATAGATCGTACATCAAATACTAATATTTTAATTTGTTAGGGAGCGGGTGTGCTCCCTTCCTTTAGTTGTTTCCTTGTTTGGAACTTATTTTGTGTACGTACTATCTTTTGGTAATAAAATTGCTATTTTACCAAAAAA

mRNA sequence

CTTTCCCTTCCCCGGTTTTCTTTTTTGCCAACCCCTTAACCATCCGCCGTTTCCATAGTTCAGTTACAGATCAAAGAAAAATTCATGGTCTCATCTTCAGTCACTCCTATAACTCTGATAGCGCACTAGTACATACTCCGGCGAGAATCTTCAGGCTGGTGGGTTGGCGGATTTCGGCGATGCTTTGCGATTGTGCAGTCTGCTGGTGGGCGGTGGCGATGACGAGGAGAGGTATGATGAAGGAAGGAGACTAGGAAAGAGAAAGAAGTGTAATGGGAAATTGCTTGGCTGTTTGTCACTGGAATTTTCCGATGATTAATTGTGCCCAGTTAGTGAAATCCTAGGTTGATGCTAAAGCTAGACTTTGCAGAATCATATATACGACAAACAAAATCCTTAAGGTCATCCAAATAGAAGCCACTGTCAAAGAGAGATGTCTGGTGCATGAGCCGTGTTGTCAGGCTGTGCCCAATGATATTTATCTAAAAGAGAAGGAAGAGGCTACCGAAACAAGTAGAAGTGGTTGGCAAGATATAGATGGTAAGGGAACGGGAGTCATTTTGAGCCATGAAAAGCTTTCGGAACATGTATCCTTTTGTTTTAAGACTGTTTTGTACTACCTTCCTATTGAATACCATGGGCATGCATCTTCTGTTGTCATCTTTGGAACTGATATAGTGAGACCAAGGGGGCAGGGACCTCCAACTCCTAATTCTCCACCCCCTTACTTTAGACCTTCGCACAAGTAAGACTATGAGCTAGAAATGGATCAAGATGATGGATTGGATCGGATAGCAAATGAAGATTAAAGTTGACATTGAGAATCATGCAGACGTAAGGGAAATCAGTTGAAGATGAAAAGATAGGAGACATTTAGTTTTGGATTATATATTTTAGTTTTGGGTATGATCATTTGATTTTATTTTGAACATAATAATGTAATTTTCATAGATCGTACATCAAATACTAATATTTTAATTTGTTAGGGAGCGGGTGTGCTCCCTTCCTTTAGTTGTTTCCTTGTTTGGAACTTATTTTGTGTACGTACTATCTTTTGGTAATAAAATTGCTATTTTACCAAAAAA

Coding sequence (CDS)

ATGAAAAGCTTTCGGAACATGTATCCTTTTGTTTTAAGACTGTTTTGTACTACCTTCCTATTGAATACCATGGGCATGCATCTTCTGTTGTCATCTTTGGAACTGATATAG

Protein sequence

MKSFRNMYPFVLRLFCTTFLLNTMGMHLLLSSLELI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo26693.1Spo26693.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo26693.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo26693.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo26693.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo26693.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010508 positive regulation of autophagy
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0006457 protein folding
biological_process GO:0048856 anatomical structure development
biological_process GO:0032501 multicellular organismal process
biological_process GO:0016311 dephosphorylation
biological_process GO:0090501 RNA phosphodiester bond hydrolysis
biological_process GO:0008033 tRNA processing
biological_process GO:0051017 actin filament bundle assembly
biological_process GO:0006887 exocytosis
biological_process GO:0007033 vacuole organization
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006906 vesicle fusion
biological_process GO:0006474 N-terminal protein amino acid acetylation
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0001101 response to acid chemical
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0006950 response to stress
biological_process GO:0006810 transport
biological_process GO:0071805 potassium ion transmembrane transport
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0008152 metabolic process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0003333 amino acid transmembrane transport
biological_process GO:0006007 glucose catabolic process
biological_process GO:0048868 pollen tube development
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006651 diacylglycerol biosynthetic process
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0006687 glycosphingolipid metabolic process
cellular_component GO:0005829 cytosol
cellular_component GO:0031201 SNARE complex
cellular_component GO:0005768 endosome
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0031248 protein acetyltransferase complex
cellular_component GO:0044464 cell part
cellular_component GO:0016020 membrane
cellular_component GO:0030176 integral component of endoplasmic reticulum membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005737 cytoplasm
molecular_function GO:0047874 dolichyldiphosphatase activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0015079 potassium ion transmembrane transporter activity
molecular_function GO:0004596 peptide alpha-N-acetyltransferase activity
molecular_function GO:0015171 amino acid transmembrane transporter activity
molecular_function GO:0008195 phosphatidate phosphatase activity
molecular_function GO:0003779 actin binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0004540 ribonuclease activity
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0000149 SNARE binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo247360.73Barchart | Table
Spo245410.73Barchart | Table
Spo269900.73Barchart | Table
Spo105830.72Barchart | Table
Spo076850.72Barchart | Table
Spo049850.72Barchart | Table
Spo106610.71Barchart | Table
Spo209120.71Barchart | Table
Spo013440.70Barchart | Table
Spo172200.70Barchart | Table
Spo242870.70Barchart | Table
Spo057650.70Barchart | Table
Spo100210.70Barchart | Table
Spo024780.70Barchart | Table
Spo028850.70Barchart | Table
Spo073200.69Barchart | Table
Spo228940.69Barchart | Table
Spo222550.69Barchart | Table
Spo018410.69Barchart | Table
Spo018850.69Barchart | Table
Spo174450.69Barchart | Table
Spo031950.69Barchart | Table
Spo065800.68Barchart | Table
Spo056210.68Barchart | Table
Spo124230.68Barchart | Table
Spo085280.68Barchart | Table
Spo088500.68Barchart | Table
Spo100190.68Barchart | Table
Spo038650.68Barchart | Table
Spo127190.67Barchart | Table
Spo216000.67Barchart | Table
Spo054500.67Barchart | Table
Spo267890.67Barchart | Table
Spo109660.67Barchart | Table
Spo254170.67Barchart | Table
Spo200900.67Barchart | Table
Spo149420.66Barchart | Table
Spo086130.66Barchart | Table
Spo108950.66Barchart | Table
Spo109650.66Barchart | Table
Spo125430.66Barchart | Table
Spo130870.66Barchart | Table
Spo131610.66Barchart | Table
Spo132380.66Barchart | Table
Spo138990.66Barchart | Table
Spo148260.66Barchart | Table
Spo237450.66Barchart | Table
Spo251070.66Barchart | Table
Spo255510.66Barchart | Table
Spo031960.65Barchart | Table
Spo001460.65Barchart | Table
Spo270040.65Barchart | Table
Spo056400.65Barchart | Table
Spo268140.65Barchart | Table
Spo185490.65Barchart | Table
Spo152750.65Barchart | Table