Spo26481 (gene)

Overview
NameSpo26481
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionDelta-1-pyrroline-5-carboxylate synthase (P5CS) (Glutamate 5-kinase) (GK) (2.7.2.11) (Gamma-glutamyl kinase) (Gamma-glutamyl phosphate reductase) (GPR) (1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase)
LocationSpoScf_01113 : 113549 .. 116758 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGGAGGGGAAAATACAACGACCACTACAACGGCCTATCATCTGATAAGTCTTATGCAACGGCTATACGAAGTTAATAAAAAAATCTATAATTATCCCGTTATTTGTCAGCTTGTCGCACACTCACACAAATCAATCTTAAACCCAAGTTACCTAACCCTCCTAAATGAGAAACTTTTTCCCCAATTCATTTCAAAATATTCAAGTTCATGTGTTCGTGAAAAGGAGAGGAAAAGAAGAGGAGAGAGAAACCCTAGCTAATTCCCTTTTCTATGCCTCCAAATCTAAACCCCCAATTCAATCTTCTGCCTTTGATGAAGTAGCGAACTGGTTAGGGAATGGGGATCCAGAAATTCAAGCCTCGTCGCCGTTTGAATTCGATGTGGTTGCTCCGGTAAGTGATTCCCCTTTTTTGGGTGTTTTTAGCCAAATTGTTTCTAGTTACTTCTTTAATGCCCCCTTATTCAAATTAGTTTCTTGCGAAAATTTTAAATTTTAGGGTTAATGTTGTTAATAATGGTTTATGTAATTACAACTTATAAGTCGATGGGCGAATTTTGATTTGATTCATTTAAATTTAGGGTTTAGCTAGAAGAGTGATTTGGGTATAAAACAAGTTAGGTGTAATTAAATCTTACAATCTTTCCATAGGAAGAATCTGATTAAAAATTAAATAGAGTGGAATTCATTGACTGGAGTTTCAAGAAGGAATACGATTAGTTTTCCTCTCATGTTGCCTCTCTTCTGCGAACTCCTTCATATCCCCCAGCAAACACAAAACTATTAGAGGTTCTAGTAAAACTTTACTTTTTTTGAGGGGTAGTAAAACTTTACTTAAAAAATGATTGTTTAATGCTTAAGAGAAGAAATCTATCTTCAATGTTTTGTACAATTAAGGTTAAAATAACCAATAGTTGCATACTTTAGTGGATTTTGTTGATTGCATAGAGTAACAAAGAACATTGAGAATAATGGATTTTGAAATATTGTCTCTTGATTGTTGATTCACTTTCTCAACTCTCTATTTCTGATTAACTAACTAAACCACAGAGAAATTGTTATGATTTTCAAAAATTATTATGTTATTTACATTTCCTAGGATGGAAATTTGATACTCTTTCCTTCGATTGGCTCTAAATATAGTGCTAAGTAACTTAATGGGGTTGTGTGGATGATGAGAATAGTTTGATGCCAGTCTTAGGTGTTTGAACTTTTTGTTAATTGTTGGATCAACTTTATATCCATTTCATTATGTGTGTTGGCAGCTTGGCACTAAGATAAAGCAGGTGGAAACTAGGTGCACTTTGTGGATAGGTGAATTAGTTGCCATCTCTTTTCAAGTTTTACCTTGGTTGAGAATCTATGGGTTCTTTACCAGTATCATATCTGGTCAAGCCTATACAAACTATGTCCCTACACTTTTTCTTTGTGTGGATCAGGGAGTTAAACATTGATGGATTTGTAGTCATTTTTGTGAGTTCAGGTGTTGTTATTGTTGGTCGTCAGAGGATTAGATTAAAGAAATTGGATTGGTGCTGTTAGTGTTGGTCGTTAGAGGCTTAGCCATGGTTGCCAGCAGGTTTGTGATTTTCTTTCTCTTTAAGCTTGCCATTGCCTAAGATTTCCCTTGTGTCGTATGAAGTAATTTTTCTTTTTGTGATAAATGCATAAAAGAACCATAAAATATGGAAGTTTTACTTTCCGGGCATCAATCAGTATTGAGCTCTATAGTTGGCTTCTCGAGTCATTACTCATTCCTGGAAACTGTTGGCTTTGTCAAGGGTTATTCTTGATCTTAGTACTTGGAGATGTGGTAAAAGAATCTTGGGCCATTCTGGCGAGAAGTTGTGATTAGTAGATAGAAATGCTTAGTGATCGAAGATACCATTGTGGGCGAATACCCTTGCATTGTACAAACTAATTTTGAACTTTTGGTTTCTTCTTTCTCATGTTAAAAGCTTAAAATCTATAATGTAAAAGGAACTATCACGTGATATGTTACCTTTCTTATGTTAAAAATTAATTTTTGAACTTCAAGTATATTTTTAATAGTGCAATTTTGCTGACCTCCAAAACCCGCAAGCTGAACAAAGCATGTGCTGTTGTTAGGCATAATGGTCTCATGGCTCTCTATGACACATTATTCAATTAGGTCAGTATTTAAGTAACTAGGTGTCTACTTATGATTGTGGAAGAAGCTGCCTCTCATTGGCCAAGCTTATTAGCATATGTTGATTATATAATGAATGTTTTTTTAGGTGAACCTGGTTGCTGCTCAACTTCTTGTTACAGATAACGACTTTAGGGATCCAAATTTTAGATCACAACTTTTTTAAACTGAAATCAGTTACTGGATTCAAAAGTGGTACCTATTCTAAATGAAAATGATGCGGTAAGTACCCGAAATGCTCCTTATGAGGTATGTACTGTTTAAAAACTTAATTTTATTTTCCCCTTTGTAACGTGGGTTCTACATTAAACAAGGTAAAAGCAGTGACCAGATAGCTCAAAACAAGTAATATCATTTGAATAATCACTGAGGGTGGGGGGAAGCAGAGCAACTAGATCGTTTGATTTAGCAAACCTGGCAGTTTAATATTTTATAATATTAACTATGTTGAAAGTAAATAACTGGAAGAAAATGATATTATATAGCGTATTTGTTCCTCATATAAGAACATGATTTGTATGTCATTGAGGGTTTCAGATCAGCCACAAAAGATATTATTAAGTTTATTGGTAAACCTATTTTCTTGATTATCTTACACAATTTCCTTTACGTGGTTGTTATGTGTAATTTCTTTGAAATTGACAAGGCAACAAGCAATATTATAAAGTGGCACTCTATTTCACCAGGATGCATACTTATGGTCTTCAGCTAAAGAAGCTGGTTCTCTGCAATTTTGTTTGACACCTAGGTAGAGAGAAAGCGTACATGGTACTGGTTTGGAAATGGAGGATCATAAGAATGATGGCGAGCTTCACAGGACTTATATGGCAGATAGTCAGTCTCTAAAATATCTTCTTACATATTATGTTATACTCTTTCTTAGGCTAACAGGGATTTAATTAGTTTTTTAGCTTCTTCTTTTGTTGAAATTTTGTTTCTTAGCTAATTCAGTAGCATTTCATTTTGTAACCCACTGATGGGAAAGGCTAAATTGTATATGTACATTTTCAATCTCAATGAAATATCATTACTTATTATCA

mRNA sequence

TTAGGAGGGGAAAATACAACGACCACTACAACGGCCTATCATCTGATAAGTCTTATGCAACGGCTATACGAAGTTAATAAAAAAATCTATAATTATCCCGTTATTTGTCAGCTTGTCGCACACTCACACAAATCAATCTTAAACCCAAGTTACCTAACCCTCCTAAATGAGAAACTTTTTCCCCAATTCATTTCAAAATATTCAAGTTCATGTGTTCGTGAAAAGGAGAGGAAAAGAAGAGGAGAGAGAAACCCTAGCTAATTCCCTTTTCTATGCCTCCAAATCTAAACCCCCAATTCAATCTTCTGCCTTTGATGAAGTAGCGAACTGGTTAGGGAATGGGGATCCAGAAATTCAAGCCTCGTCGCCGTTTGAATTCGATGTGGTTGCTCCGGTGAACCTGGTTGCTGCTCAACTTCTTGTTACAGATAACGACTTTAGGGATCCAAATTTTAGATCACAACTTTTTTAAACTGAAATCAGTTACTGGATTCAAAAGTGGTACCTATTCTAAATGAAAATGATGCGGATGCATACTTATGGTCTTCAGCTAAAGAAGCTGGTTCTCTGCAATTTTGTTTGACACCTAGGTAGAGAGAAAGCGTACATGGTACTGGTTTGGAAATGGAGGATCATAAGAATGATGGCGAGCTTCACAGGACTTATATGGCAGATAGTCAGTCTCTAAAATATCTTCTTACATATTATGTTATACTCTTTCTTAGGCTAACAGGGATTTAATTAGTTTTTTAGCTTCTTCTTTTGTTGAAATTTTGTTTCTTAGCTAATTCAGTAGCATTTCATTTTGTAACCCACTGATGGGAAAGGCTAAATTGTATATGTACATTTTCAATCTCAATGAAATATCATTACTTATTATCA

Coding sequence (CDS)

ATGAGAAACTTTTTCCCCAATTCATTTCAAAATATTCAAGTTCATGTGTTCGTGAAAAGGAGAGGAAAAGAAGAGGAGAGAGAAACCCTAGCTAATTCCCTTTTCTATGCCTCCAAATCTAAACCCCCAATTCAATCTTCTGCCTTTGATGAAGTAGCGAACTGGTTAGGGAATGGGGATCCAGAAATTCAAGCCTCGTCGCCGTTTGAATTCGATGTGGTTGCTCCGGTGAACCTGGTTGCTGCTCAACTTCTTGTTACAGATAACGACTTTAGGGATCCAAATTTTAGATCACAACTTTTTTAA

Protein sequence

MRNFFPNSFQNIQVHVFVKRRGKEEERETLANSLFYASKSKPPIQSSAFDEVANWLGNGDPEIQASSPFEFDVVAPVNLVAAQLLVTDNDFRDPNFRSQLF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo26481.1Spo26481.1mRNA


Homology
[Close]
BLAST of Spo26481.1 vs. NCBI nr
Match: gi|902192737|gb|KNA12106.1| (hypothetical protein SOVF_128940, partial [Spinacia oleracea])

HSP 1 Score: 117.1 bits (292), Expect = 1.800e-23
Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 1 

		  

Query: 21 RGKEEERETLANSLFYASKSKPPIQSSAFDEVANWLGNGDPEIQASSPFEFDVVAPVNLV 80
          RGKEEERETLANSLFYASKSKPPIQSSAFDEVANWLGNGDPEIQASSPFEFDVVAP+   
Sbjct: 1  RGKEEERETLANSLFYASKSKPPIQSSAFDEVANWLGNGDPEIQASSPFEFDVVAPLGTK 60

Query: 81 AAQL 85
            Q+
Sbjct: 61 IKQV 64
[Close]
BLAST of Spo26481.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R012_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_128940 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.300e-23
Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 1 

		  

Query: 21 RGKEEERETLANSLFYASKSKPPIQSSAFDEVANWLGNGDPEIQASSPFEFDVVAPVNLV 80
          RGKEEERETLANSLFYASKSKPPIQSSAFDEVANWLGNGDPEIQASSPFEFDVVAP+   
Sbjct: 1  RGKEEERETLANSLFYASKSKPPIQSSAFDEVANWLGNGDPEIQASSPFEFDVVAPLGTK 60

Query: 81 AAQL 85
            Q+
Sbjct: 61 IKQV 64
The following BLAST results are available for this feature:
BLAST of Spo26481.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 1
Match NameE-valueIdentityDescription
gi|902192737|gb|KNA12106.1|1.8e-2389.0hypothetical protein SOVF_1289... [more]
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BLAST of Spo26481.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0K9R012_SPIOL1.3e-2389.0Uncharacterized protein (Fragm... [more]
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BLAST of Spo26481.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo26481.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042542 response to hydrogen peroxide
biological_process GO:0051017 actin filament bundle assembly
biological_process GO:0006887 exocytosis
biological_process GO:0016049 cell growth
biological_process GO:0006897 endocytosis
biological_process GO:0006189 'de novo' IMP biosynthetic process
biological_process GO:0009113 purine nucleobase biosynthetic process
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006474 N-terminal protein amino acid acetylation
biological_process GO:0000902 cell morphogenesis
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0034645 cellular macromolecule biosynthetic process
biological_process GO:0009987 cellular process
biological_process GO:0006906 vesicle fusion
biological_process GO:0006468 protein phosphorylation
biological_process GO:0007033 vacuole organization
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0015940 pantothenate biosynthetic process
biological_process GO:0006281 DNA repair
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0009644 response to high light intensity
biological_process GO:0009408 response to heat
biological_process GO:0034976 response to endoplasmic reticulum stress
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006457 protein folding
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0008152 metabolic process
biological_process GO:0032482 Rab protein signal transduction
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0061025 membrane fusion
cellular_component GO:0005737 cytoplasm
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005773 vacuole
cellular_component GO:0031201 SNARE complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005768 endosome
cellular_component GO:0031248 protein acetyltransferase complex
cellular_component GO:0044464 cell part
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005634 nucleus
molecular_function GO:0016874 ligase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0008022 protein C-terminus binding
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0019003 GDP binding
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0003924 GTPase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008897 holo-[acyl-carrier-protein] synthase activity
molecular_function GO:0008233 peptidase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0004596 peptide alpha-N-acetyltransferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004637 phosphoribosylamine-glycine ligase activity
molecular_function GO:0003779 actin binding
molecular_function GO:0000149 SNARE binding
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:0017111 nucleoside-triphosphatase activity
molecular_function GO:0003677 DNA binding
RNA-Seq Expression