Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTCATCTCTATCTTTCCCCTTCCTCTATAAAAGGGGACTGAGGTCCTCTGTCTTAAGGCTCGTGTTTTGAGCAGCTTACTCTTCGGGATCATCAAACAAAAACGAAGCAACAACAAGAATAAAAAAAAAAAACAAAGAGAGAGAAAACCCTAGAAAATCAAATCAAATCAAATCAAAAGGGGGAAAAATCCAGCAAATTCAGATTCAAATTTCAACTGTTTTATCACTTCGATTTCTGAACTTGAGTGAAGAAATGATGAGTGACGAATTGGTTTTGCCTCCCGGATTCCGATTCCACCCAACTGATGAGGAATTAGTGGTTCATTATTTGTGTCGAAAGTGCGCTTCTCAACGGATTTCTGTTCCTATTATTGCTGAAATTGATCTCTACAAATTCGACCCTTGGCAACTACCTGGTAATTTTTCTCATTTTTTCGATTTTAATTGGTTCAGAACTTCAGATATCGTATGAGTGTATGACTGGTTATTAACTGGAGTTCGGGAGTCGATTTTTGGAGTGATTGATTTTTTTGGGGGAAATTTGTTCATTTGAGTGAGATTAATTTTATTTTCCCCAAAAATAAACTGGATTTAATCAATTTAAAAATGGTTTTATATTAAAATGAATAAAAATCTACTGAATTTTAATTATTTTTTTGTTAAAAAGTGAAATCGGCTAAAGTTTAGGATATTTATGGATGAACAGGAATGGCTTTGTACGGTGAAAAGGAGTGGTATTTCTTTTCTCCAAGGGACCGGAAATATCCAAACGGGTCAAGGCCGAATCGGGCAGCTGGAACCGGGTATTGGAAAGCAACCGGGGCGGATAAACCGATTGGAAAACCGAAAACTCTTGGAATTAAAAAGGCTTTGGTATTCTATGCCGGAAAAGCCCCTAAGGGTGTCAAGACTAATTGGATAATGCACGAATATCGCCTCGCTAATGTTGATCGCTCCGCCGGAAAGAGAACCAATCTTAGGGTAAATTTCATTTTAACCCTTTGTTAATTTAATTTAATTGCTTTCAAGTTCATGAAAATTTACTCTTGCTATTTGTTACGGAGTAGTAATTTCAATACAACAATTTTGACCCTTTTGTAGAGTTAAGGGTAAAATGGGTAGAATTGAATTAATAAAGGGTAATTTGGTCATTAACTAAATTGGTAATGAATAATGATACTAGGTGTCAAAATCTGTATGGATTATATTTTTTACTTAATAAAAAATATATAGGATTATGAATTCATGTGATTCACTAGACTTTTCTAGTGCTACATTATGGACCACCCATATGAAGACAAACATAGTCTAAAATATGGACCTTCCTAGAAGCTCTTGTATAATTTGGCATTTTTCAATAGTATATATATTTTGTTTATTTGTGATTTTTAATTGCATAATTTTAGTAACATAATATTAAACCTTTGAAACTTGTACTAAAAAAGTAGTAACATTAATTGTATGAAACTTTTGAAATAATGCTTAATTGATTCATCTACAAAACAAGAGATAAGATAAGGCTTGTCTATACCAACTTTGTTCCTAACATAGTAACGTGCCATTTTATTTTCCCGTGGTCTAGTAACTTACATTAGTCAATTATCGATGATTTCGATATATAAACATGTTATGTCAAAGAGTCGGGCTATTTGGCTATATATTACCCACCTAACGCGGGTAAAATGAGATAAAGATGTCATGTTTTTTTTGAGGTTGATATGTCATTCTTAGTTGTCGCTCGGAGTACATTTAATATTAGCTTGAGTTTGTAGTTGTAACTTGTACGGTTTGGACTTAAGCACTAATTAACGGATGTTAACATCTTATGATCAACTCTTAAGCAACATTAATAATGAGCTTAATAAGTCAATAATTGGATTAGCTTAACGACGTGTCGATAAATGACGGGCCGAATCAATAATTAACATTTTTTAATTCCGCTATTTCAGCTTGATGATTGGGTGTTATGCCGTATCTACAACAAGAAAGGGGTCATTGAGAAGGACTTCATTGATCAAAAGCCCAAGCCCATGTCTATGCCTACTTCCATTACACAGTATCCCGAATTCGAGGATCAAAAGCCCGTGATTTCAACACTCGGACAAACCGGGCCCATGGGCTACAACATGACGACTACATCGCCGATACCTCAGCCGAAGAACGACCTGATGCACTTCGACACTTCGGACTCCGTTCCTCGTTGCCACACGGACACGAGCGGGTCTAACCACGTAGCCTCGCCCGAGTTTATGTGTGATAAGGAGGTCCAAAGTGATCCTAAATGGAATGAACTAGAGAAGAACCTTGATTTCCCTTCATTCAATTACATGGAACCATTTCCTGATGACCCGTTCACCTCAACGGCCCAATTCCATAATGACCAGATGGGCAATTATCAGGACATATTCATGCTTCTTCGGTAAAGCAGTAAGCTAGCCCGCCCCACCCCGCCCCAGCCCAGCCCAGCACAGCCCAGCCCGGCATGTTTCAGTGACAAGAAACTGTAAGGAAATGATGCTAGACCGGCCCGGCCCGGCATGTTCCAATGACAAGAAGCTCATAAGGAAAGGATGCTAGACTTGCTAGTGTATGTAATGGTAGGATGCTGATGAAGAATAGTATTTAGAAGGATGAGAAATTAGTCCTTTAGTAAATTCATTCTTAAGATTCAGCATGTTAATATGTAGTCACCTCTAGGATTATAGTAGATTTTAGGGGCGTTTTTAGCACAATTTTTGTTCATCAAAAATATTGCGGGAAATTTCATTATTTGGAATCCAGTTATTTAGCCTGAGACGTATATAATGTTCTATTTTTTTGGGATGGCAAAGATTAGGCAATTTTATGTTCATATAATCCTTGTGTTTGTATCTTGAGAACAACGAATACATGGACAAAAATTGGTTTGTCGATGAAGATTTGTTGTAATTCATGCTCTGGTAGTCACTAGACTCACTACCTTGTTGTAAGAACTTGGACAATGGTTCTTGACAAAAGAACTACAACACCTTAACAATATACTCCCTCTGTATTTATTTAAGGGATACACTTGCCTTTTCCGGCCGTATTTATTTAAGAGATATATTTGCCATTTTTAGTAACTTATCAACCCCACCATCTAATTAAATAATCTATCTACACCCCACCCCCACCCTCCATCCCCTAAAATGACATGGTCCCCACTTGTTTTAATTATTAAAATATCTACCCAACCCCACTTGTTTTATTACTTTATTTCATTCAATTCTTCTTCTTAATACCCGTGCCCGG ACTCATCTCTATCTTTCCCCTTCCTCTATAAAAGGGGACTGAGGTCCTCTGTCTTAAGGCTCGTGTTTTGAGCAGCTTACTCTTCGGGATCATCAAACAAAAACGAAGCAACAACAAGAATAAAAAAAAAAAACAAAGAGAGAGAAAACCCTAGAAAATCAAATCAAATCAAATCAAAAGGGGGAAAAATCCAGCAAATTCAGATTCAAATTTCAACTGTTTTATCACTTCGATTTCTGAACTTGAGTGAAGAAATGATGAGTGACGAATTGGTTTTGCCTCCCGGATTCCGATTCCACCCAACTGATGAGGAATTAGTGGTTCATTATTTGTGTCGAAAGTGCGCTTCTCAACGGATTTCTGTTCCTATTATTGCTGAAATTGATCTCTACAAATTCGACCCTTGGCAACTACCTGGAATGGCTTTGTACGGTGAAAAGGAGTGGTATTTCTTTTCTCCAAGGGACCGGAAATATCCAAACGGGTCAAGGCCGAATCGGGCAGCTGGAACCGGGTATTGGAAAGCAACCGGGGCGGATAAACCGATTGGAAAACCGAAAACTCTTGGAATTAAAAAGGCTTTGGTATTCTATGCCGGAAAAGCCCCTAAGGGTGTCAAGACTAATTGGATAATGCACGAATATCGCCTCGCTAATGTTGATCGCTCCGCCGGAAAGAGAACCAATCTTAGGCTTGATGATTGGGTGTTATGCCGTATCTACAACAAGAAAGGGGTCATTGAGAAGGACTTCATTGATCAAAAGCCCAAGCCCATGTCTATGCCTACTTCCATTACACAGTATCCCGAATTCGAGGATCAAAAGCCCGTGATTTCAACACTCGGACAAACCGGGCCCATGGGCTACAACATGACGACTACATCGCCGATACCTCAGCCGAAGAACGACCTGATGCACTTCGACACTTCGGACTCCGTTCCTCGTTGCCACACGGACACGAGCGGGTCTAACCACGTAGCCTCGCCCGAGTTTATGTGTGATAAGGAGGTCCAAAGTGATCCTAAATGGAATGAACTAGAGAAGAACCTTGATTTCCCTTCATTCAATTACATGGAACCATTTCCTGATGACCCGTTCACCTCAACGGCCCAATTCCATAATGACCAGATGGGCAATTATCAGGACATATTCATGCTTCTTCGGTAAAGCAGTAAGCTAGCCCGCCCCACCCCGCCCCAGCCCAGCCCAGCACAGCCCAGCCCGGCATGTTTCAGTGACAAGAAACTGTAAGGAAATGATGCTAGACCGGCCCGGCCCGGCATGTTCCAATGACAAGAAGCTCATAAGGAAAGGATGCTAGACTTGCTAGTGTATGTAATGGTAGGATGCTGATGAAGAATAGTATTTAGAAGGATGAGAAATTAGTCCTTTAGTAAATTCATTCTTAAGATTCAGCATGTTAATATGTAGTCACCTCTAGGATTATAGTAGATTTTAGGGGCGTTTTTAGCACAATTTTTGTTCATCAAAAATATTGCGGGAAATTTCATTATTTGGAATCCAGTTATTTAGCCTGAGACGTATATAATGTTCTATTTTTTTGGGATGGCAAAGATTAGGCAATTTTATGTTCATATAATCCTTGTGTTTGTATCTTGAGAACAACGAATACATGGACAAAAATTGGTTTGTCGATGAAGATTTGTTGTAATTCATGCTCTGGTAGTCACTAGACTCACTACCTTGTTGTAAGAACTTGGACAATGGTTCTTGACAAAAGAACTACAACACCTTAACAATATACTCCCTCTGTATTTATTTAAGGGATACACTTGCCTTTTCCGGCCGTATTTATTTAAGAGATATATTTGCCATTTTTAGTAACTTATCAACCCCACCATCTAATTAAATAATCTATCTACACCCCACCCCCACCCTCCATCCCCTAAAATGACATGGTCCCCACTTGTTTTAATTATTAAAATATCTACCCAACCCCACTTGTTTTATTACTTTATTTCATTCAATTCTTCTTCTTAATACCCGTGCCCGG ATGATGAGTGACGAATTGGTTTTGCCTCCCGGATTCCGATTCCACCCAACTGATGAGGAATTAGTGGTTCATTATTTGTGTCGAAAGTGCGCTTCTCAACGGATTTCTGTTCCTATTATTGCTGAAATTGATCTCTACAAATTCGACCCTTGGCAACTACCTGGAATGGCTTTGTACGGTGAAAAGGAGTGGTATTTCTTTTCTCCAAGGGACCGGAAATATCCAAACGGGTCAAGGCCGAATCGGGCAGCTGGAACCGGGTATTGGAAAGCAACCGGGGCGGATAAACCGATTGGAAAACCGAAAACTCTTGGAATTAAAAAGGCTTTGGTATTCTATGCCGGAAAAGCCCCTAAGGGTGTCAAGACTAATTGGATAATGCACGAATATCGCCTCGCTAATGTTGATCGCTCCGCCGGAAAGAGAACCAATCTTAGGCTTGATGATTGGGTGTTATGCCGTATCTACAACAAGAAAGGGGTCATTGAGAAGGACTTCATTGATCAAAAGCCCAAGCCCATGTCTATGCCTACTTCCATTACACAGTATCCCGAATTCGAGGATCAAAAGCCCGTGATTTCAACACTCGGACAAACCGGGCCCATGGGCTACAACATGACGACTACATCGCCGATACCTCAGCCGAAGAACGACCTGATGCACTTCGACACTTCGGACTCCGTTCCTCGTTGCCACACGGACACGAGCGGGTCTAACCACGTAGCCTCGCCCGAGTTTATGTGTGATAAGGAGGTCCAAAGTGATCCTAAATGGAATGAACTAGAGAAGAACCTTGATTTCCCTTCATTCAATTACATGGAACCATTTCCTGATGACCCGTTCACCTCAACGGCCCAATTCCATAATGACCAGATGGGCAATTATCAGGACATATTCATGCTTCTTCGGTAA MMSDELVLPPGFRFHPTDEELVVHYLCRKCASQRISVPIIAEIDLYKFDPWQLPGMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSAGKRTNLRLDDWVLCRIYNKKGVIEKDFIDQKPKPMSMPTSITQYPEFEDQKPVISTLGQTGPMGYNMTTTSPIPQPKNDLMHFDTSDSVPRCHTDTSGSNHVASPEFMCDKEVQSDPKWNELEKNLDFPSFNYMEPFPDDPFTSTAQFHNDQMGNYQDIFMLLR Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo26147.1 vs. NCBI nr
Match: gi|902195377|gb|KNA12815.1| (hypothetical protein SOVF_122510 [Spinacia oleracea]) HSP 1 Score: 645.6 bits (1664), Expect = 4.400e-182 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 1
BLAST of Spo26147.1 vs. NCBI nr
Match: gi|731327095|ref|XP_010674351.1| (PREDICTED: NAC domain-containing protein 2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 572.0 bits (1473), Expect = 6.100e-160 Identity = 273/304 (89.80%), Postives = 281/304 (92.43%), Query Frame = 1
BLAST of Spo26147.1 vs. NCBI nr
Match: gi|555431948|gb|AGZ15313.1| (NAC-like protein 2 [Suaeda liaotungensis]) HSP 1 Score: 534.3 bits (1375), Expect = 1.400e-148 Identity = 256/306 (83.66%), Postives = 273/306 (89.22%), Query Frame = 1
BLAST of Spo26147.1 vs. NCBI nr
Match: gi|311701727|gb|ADQ00628.1| (NAC-like protein 1 [Phytolacca acinosa]) HSP 1 Score: 468.0 bits (1203), Expect = 1.200e-128 Identity = 230/301 (76.41%), Postives = 249/301 (82.72%), Query Frame = 1
BLAST of Spo26147.1 vs. NCBI nr
Match: gi|751143084|gb|AJF38901.1| (NAC transcription factor [Diospyros kaki]) HSP 1 Score: 424.1 bits (1089), Expect = 2.100e-115 Identity = 209/301 (69.44%), Postives = 236/301 (78.41%), Query Frame = 1
BLAST of Spo26147.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QZX0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_122510 PE=4 SV=1) HSP 1 Score: 645.6 bits (1664), Expect = 3.000e-182 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 1
BLAST of Spo26147.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CPM6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g078190 PE=4 SV=1) HSP 1 Score: 572.0 bits (1473), Expect = 4.300e-160 Identity = 273/304 (89.80%), Postives = 281/304 (92.43%), Query Frame = 1
BLAST of Spo26147.1 vs. UniProtKB/TrEMBL
Match: A0A059SQ10_9CARY (NAC-like protein 2 OS=Suaeda liaotungensis GN=NAC2 PE=2 SV=1) HSP 1 Score: 534.3 bits (1375), Expect = 9.900e-149 Identity = 256/306 (83.66%), Postives = 273/306 (89.22%), Query Frame = 1
BLAST of Spo26147.1 vs. UniProtKB/TrEMBL
Match: E7BQV7_PHYAN (NAC-like protein 1 OS=Phytolacca acinosa GN=NAC1 PE=2 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 8.700e-129 Identity = 230/301 (76.41%), Postives = 249/301 (82.72%), Query Frame = 1
BLAST of Spo26147.1 vs. UniProtKB/TrEMBL
Match: A0A0B5GZP9_DIOKA (NAC transcription factor OS=Diospyros kaki GN=NAC1 PE=2 SV=1) HSP 1 Score: 424.1 bits (1089), Expect = 1.400e-115 Identity = 209/301 (69.44%), Postives = 236/301 (78.41%), Query Frame = 1
BLAST of Spo26147.1 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2) HSP 1 Score: 357.5 bits (916), Expect = 1.500e-97 Identity = 187/311 (60.13%), Postives = 220/311 (70.74%), Query Frame = 1
BLAST of Spo26147.1 vs. ExPASy Swiss-Prot
Match: NAC81_ARATH (Protein ATAF2 OS=Arabidopsis thaliana GN=NAC081 PE=1 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 6.100e-91 Identity = 184/307 (59.93%), Postives = 208/307 (67.75%), Query Frame = 1
BLAST of Spo26147.1 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 7.400e-89 Identity = 171/274 (62.41%), Postives = 197/274 (71.90%), Query Frame = 1
BLAST of Spo26147.1 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=1 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 5.100e-82 Identity = 144/174 (82.76%), Postives = 153/174 (87.93%), Query Frame = 1
BLAST of Spo26147.1 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 5.300e-79 Identity = 153/263 (58.17%), Postives = 179/263 (68.06%), Query Frame = 1
BLAST of Spo26147.1 vs. TAIR (Arabidopsis)
Match: AT1G01720.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 357.5 bits (916), Expect = 8.400e-99 Identity = 187/311 (60.13%), Postives = 220/311 (70.74%), Query Frame = 1
BLAST of Spo26147.1 vs. TAIR (Arabidopsis)
Match: AT5G08790.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 335.5 bits (859), Expect = 3.400e-92 Identity = 184/307 (59.93%), Postives = 208/307 (67.75%), Query Frame = 1
BLAST of Spo26147.1 vs. TAIR (Arabidopsis)
Match: AT5G63790.1 (NAC domain containing protein 102) HSP 1 Score: 305.8 bits (782), Expect = 2.900e-83 Identity = 144/174 (82.76%), Postives = 153/174 (87.93%), Query Frame = 1
BLAST of Spo26147.1 vs. TAIR (Arabidopsis)
Match: AT1G77450.1 (NAC domain containing protein 32) HSP 1 Score: 297.4 bits (760), Expect = 1.000e-80 Identity = 133/160 (83.12%), Postives = 144/160 (90.00%), Query Frame = 1
BLAST of Spo26147.1 vs. TAIR (Arabidopsis)
Match: AT1G52890.1 (NAC domain containing protein 19) HSP 1 Score: 242.7 bits (618), Expect = 3.000e-64 Identity = 114/165 (69.09%), Postives = 128/165 (77.58%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo26147.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo26147.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo26147.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo26147.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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