Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATAAAATGAAGGGTATTAAGGTCAATCAGCAAAACAACAGTGTCTTCTTTTGAGAAACCAATCTGTCCAATCGCTGGCACGCACAGCAAAACTTCTCCCTCCTAAATTCCTTTGTTATAAAATTGAAAGGGTTGCAAATACGAGAGGATCGAGTGAAGAATATCTAGACAGTTCAAAAAACAGAGAGAGAAAATGTTGAATTCAAAGTGTCTGTTCCTCTATACTTTCCTGCTTCTGATTGTATTGCAAGCCAAAGTGTTCTGTTTTCAGCACAAAGTTGGAGACTTGAATTCATGGACAATCCCAACTGCAACTAATCACGATATCTACGCCAAATGGTCCAACAAAACCACTTTCAAAGTTGGAGATTCTCTTTGTAAGCCATTTTTCCTTTTGGTATTATTCAACTTGTTCTAAAATGTATAACATTATCATGTAGAATCTTGTTAGATTAGTCGCAATGATGTAGGATTTTGTGATCAATGTGAACTAATTATGTTATGATTAATTGGGATTTGATGCAGTGTTTTTGTACCCACCAAGCCAAGATTCAGTAATACAAGTAACACCACAAGCTTACAAATCATGCAAGCTTAAAGATCCAATCTTGTACATGAATGATGGAAACTCTCTGTTCAACATAACTCAACCAGGAAATTTCTACTTCACTAGTGGAGAAACAGGGCATTGCCAAAAAGGCCAAAAGCTTCAAATTTCTATTTCTGGAGATGGAGCTGTTGTTTATGCACCAGCAGAAAGTCCAGGTGCAATGTCAGAAACTGCTGATGCACCTTCTTATCATCAAAATTTTGGGTCAATCCCAACTCCATCTACTTCATCTCCAATCCTTAGATTTTCTGCATTTTTGGGTTCTTTGATTGTTTCTGCAATCTGGGTTCTTGCCTGATTGCTGTAATCAAAGCCATATCATGTGTTCAACTTTATTATTTATTATTTTTTTCAATTTTTTGTCGGTGAAAGTTTATAGTATAATTGAGATGAGATCCAATTACGAAAGGGCAAATGTGTAAAATTGATTGCCTCCCATTTTTTTGATAAAAAATCTGAAGTCTTTGGGGTCCTAATTTATTATTCTTTTTATAATTTATTACAGTGATTACTGATTAGTGCATAAACATGCATTGGTTTTGTGTCTGTCGGTCTAATGTCTATTGCTTTTATAACAACAATTACAAAATGTGCAACAATGTCGTAGAAATATAACAATATTAAAAAAAAAATCAAAGATTGTTTTAATGTGTACCAAG AATAAAATGAAGGGTATTAAGGTCAATCAGCAAAACAACAGTGTCTTCTTTTGAGAAACCAATCTGTCCAATCGCTGGCACGCACAGCAAAACTTCTCCCTCCTAAATTCCTTTGTTATAAAATTGAAAGGGTTGCAAATACGAGAGGATCGAGTGAAGAATATCTAGACAGTTCAAAAAACAGAGAGAGAAAATGTTGAATTCAAAGTGTCTGTTCCTCTATACTTTCCTGCTTCTGATTGTATTGCAAGCCAAAGTGTTCTGTTTTCAGCACAAAGTTGGAGACTTGAATTCATGGACAATCCCAACTGCAACTAATCACGATATCTACGCCAAATGGTCCAACAAAACCACTTTCAAAGTTGGAGATTCTCTTTTGTTTTTGTACCCACCAAGCCAAGATTCAGTAATACAAGTAACACCACAAGCTTACAAATCATGCAAGCTTAAAGATCCAATCTTGTACATGAATGATGGAAACTCTCTGTTCAACATAACTCAACCAGGAAATTTCTACTTCACTAGTGGAGAAACAGGGCATTGCCAAAAAGGCCAAAAGCTTCAAATTTCTATTTCTGGAGATGGAGCTGTTGTTTATGCACCAGCAGAAAGTCCAGGTGCAATGTCAGAAACTGCTGATGCACCTTCTTATCATCAAAATTTTGGGTCAATCCCAACTCCATCTACTTCATCTCCAATCCTTAGATTTTCTGCATTTTTGGGTTCTTTGATTGTTTCTGCAATCTGGGTTCTTGCCTGATTGCTGTAATCAAAGCCATATCATGTGTTCAACTTTATTATTTATTATTTTTTTCAATTTTTTGTCGGTGAAAGTTTATAGTATAATTGAGATGAGATCCAATTACGAAAGGGCAAATGTGTAAAATTGATTGCCTCCCATTTTTTTGATAAAAAATCTGAAGTCTTTGGGGTCCTAATTTATTATTCTTTTTATAATTTATTACAGTGATTACTGATTAGTGCATAAACATGCATTGGTTTTGTGTCTGTCGGTCTAATGTCTATTGCTTTTATAACAACAATTACAAAATGTGCAACAATGTCGTAGAAATATAACAATATTAAAAAAAAAATCAAAGATTGTTTTAATGTGTACCAAG ATGTTGAATTCAAAGTGTCTGTTCCTCTATACTTTCCTGCTTCTGATTGTATTGCAAGCCAAAGTGTTCTGTTTTCAGCACAAAGTTGGAGACTTGAATTCATGGACAATCCCAACTGCAACTAATCACGATATCTACGCCAAATGGTCCAACAAAACCACTTTCAAAGTTGGAGATTCTCTTTTGTTTTTGTACCCACCAAGCCAAGATTCAGTAATACAAGTAACACCACAAGCTTACAAATCATGCAAGCTTAAAGATCCAATCTTGTACATGAATGATGGAAACTCTCTGTTCAACATAACTCAACCAGGAAATTTCTACTTCACTAGTGGAGAAACAGGGCATTGCCAAAAAGGCCAAAAGCTTCAAATTTCTATTTCTGGAGATGGAGCTGTTGTTTATGCACCAGCAGAAAGTCCAGGTGCAATGTCAGAAACTGCTGATGCACCTTCTTATCATCAAAATTTTGGGTCAATCCCAACTCCATCTACTTCATCTCCAATCCTTAGATTTTCTGCATTTTTGGGTTCTTTGATTGTTTCTGCAATCTGGGTTCTTGCCTGA MLNSKCLFLYTFLLLIVLQAKVFCFQHKVGDLNSWTIPTATNHDIYAKWSNKTTFKVGDSLLFLYPPSQDSVIQVTPQAYKSCKLKDPILYMNDGNSLFNITQPGNFYFTSGETGHCQKGQKLQISISGDGAVVYAPAESPGAMSETADAPSYHQNFGSIPTPSTSSPILRFSAFLGSLIVSAIWVLA Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo25944.1 vs. NCBI nr
Match: gi|902201793|gb|KNA14081.1| (hypothetical protein SOVF_110790 [Spinacia oleracea]) HSP 1 Score: 379.8 bits (974), Expect = 2.800e-102 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1
BLAST of Spo25944.1 vs. NCBI nr
Match: gi|731331855|ref|XP_010676883.1| (PREDICTED: mavicyanin [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 294.7 bits (753), Expect = 1.200e-76 Identity = 144/184 (78.26%), Postives = 154/184 (83.70%), Query Frame = 1
BLAST of Spo25944.1 vs. NCBI nr
Match: gi|590675343|ref|XP_007039421.1| (Stellacyanin, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 228.0 bits (580), Expect = 1.300e-56 Identity = 108/180 (60.00%), Postives = 135/180 (75.00%), Query Frame = 1
BLAST of Spo25944.1 vs. NCBI nr
Match: gi|728848729|gb|KHG28172.1| (hypothetical protein F383_08075 [Gossypium arboreum]) HSP 1 Score: 226.5 bits (576), Expect = 3.900e-56 Identity = 112/189 (59.26%), Postives = 143/189 (75.66%), Query Frame = 1
BLAST of Spo25944.1 vs. NCBI nr
Match: gi|823141143|ref|XP_012470393.1| (PREDICTED: mavicyanin [Gossypium raimondii]) HSP 1 Score: 219.5 bits (558), Expect = 4.800e-54 Identity = 107/179 (59.78%), Postives = 136/179 (75.98%), Query Frame = 1
BLAST of Spo25944.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R3J1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_110790 PE=4 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 1.900e-102 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1
BLAST of Spo25944.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CF63_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g103740 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 8.200e-77 Identity = 144/184 (78.26%), Postives = 154/184 (83.70%), Query Frame = 1
BLAST of Spo25944.1 vs. UniProtKB/TrEMBL
Match: A0A061G400_THECC (Stellacyanin, putative isoform 1 OS=Theobroma cacao GN=TCM_015667 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 9.400e-57 Identity = 108/180 (60.00%), Postives = 135/180 (75.00%), Query Frame = 1
BLAST of Spo25944.1 vs. UniProtKB/TrEMBL
Match: A0A0B0PTI7_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_08075 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 2.700e-56 Identity = 112/189 (59.26%), Postives = 143/189 (75.66%), Query Frame = 1
BLAST of Spo25944.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QGZ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G075500 PE=4 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 3.300e-54 Identity = 107/179 (59.78%), Postives = 136/179 (75.98%), Query Frame = 1
BLAST of Spo25944.1 vs. ExPASy Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2) HSP 1 Score: 98.2 bits (243), Expect = 1.000e-19 Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 1
BLAST of Spo25944.1 vs. ExPASy Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 6.100e-17 Identity = 44/101 (43.56%), Postives = 56/101 (55.45%), Query Frame = 1
BLAST of Spo25944.1 vs. ExPASy Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.500e-15 Identity = 55/167 (32.93%), Postives = 83/167 (49.70%), Query Frame = 1
BLAST of Spo25944.1 vs. ExPASy Swiss-Prot
Match: ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2) HSP 1 Score: 75.9 bits (185), Expect = 5.400e-13 Identity = 51/182 (28.02%), Postives = 91/182 (50.00%), Query Frame = 1
BLAST of Spo25944.1 vs. ExPASy Swiss-Prot
Match: STEL_TOXVR (Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.000e-12 Identity = 35/102 (34.31%), Postives = 53/102 (51.96%), Query Frame = 1
BLAST of Spo25944.1 vs. TAIR (Arabidopsis)
Match: AT1G64640.1 (early nodulin-like protein 8) HSP 1 Score: 158.3 bits (399), Expect = 4.600e-39 Identity = 94/188 (50.00%), Postives = 117/188 (62.23%), Query Frame = 1
BLAST of Spo25944.1 vs. TAIR (Arabidopsis)
Match: AT3G20570.1 (early nodulin-like protein 9) HSP 1 Score: 99.0 bits (245), Expect = 3.300e-21 Identity = 57/200 (28.50%), Postives = 98/200 (49.00%), Query Frame = 1
BLAST of Spo25944.1 vs. TAIR (Arabidopsis)
Match: AT2G25060.1 (early nodulin-like protein 14) HSP 1 Score: 98.2 bits (243), Expect = 5.700e-21 Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 1
BLAST of Spo25944.1 vs. TAIR (Arabidopsis)
Match: AT1G48940.1 (early nodulin-like protein 6) HSP 1 Score: 98.2 bits (243), Expect = 5.700e-21 Identity = 57/151 (37.75%), Postives = 83/151 (54.97%), Query Frame = 1
BLAST of Spo25944.1 vs. TAIR (Arabidopsis)
Match: AT4G31840.1 (early nodulin-like protein 15) HSP 1 Score: 96.7 bits (239), Expect = 1.700e-20 Identity = 47/123 (38.21%), Postives = 67/123 (54.47%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo25944.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo25944.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo25944.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo25944.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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