Spo25844 (gene)

Overview
NameSpo25844
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide repeat-containing protein
Locationchr1 : 13241033 .. 13242481 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATCAAACTCCTGCGCGATTATGCAACAATCTTCAACGTATCACTCGCAATCTTTCTCTTCCCCCAACAATCTGCTTCCACTCTTCTTCAATCCATCCAGAAAATCACCACCATGATAAACCGCCACCACTACCACCACCATTATCACACCAAACAAGATATAACCCAGAATCCCAAAATGATTTACAATCATTCTCAAGAACCCTAATTGCTTCCCCAAATCGAATCCACAAGCTGATTTCCTCTCAATCAGACCCTCTTTTAGCCAAAGAAATCTTTGATTTAGCCTCTCGCCAACCCAATTTCCGCCATTCTTACCCCACTTTCCACACTCTGATCATCAAATTGGGAAATGCTCGTCAATTCTCGCTCATGGAGAAGCTTCTTTCTCAGCTCAAACGCCTTCGTTACCCTACAACTCCAGGTCTGTTTTCTCGCTTAATTTGCATTTACGGCGATGCCCATATGCCTGAAAAGGCCCTTAAGATGTTCTATAGCATCGTTGAGTTTAACTGTAATCCCACCTCGAAACACCTGAATCATGTTCTTTCTATTCTCGTGGCTCAGCGGAGCTTTCTTCGGCCTGCTTTTGATCTTTTTAGGATTGCACATAAGTATGCAGTGGACCCAAATGTGAAATCTTACAACATTTTGATGAGGGCTTTCTGTGGTAATGATGAACTTAGTGTTGCCTATAAGCTGTTCAACGATATGCTTAAGAGAGAGATTTTGCCTGATGTTGAATCTTATAGAATTTTGATGCAGGCATTGTGTAGGAAGAGTCAAGTGACTAAAGCTATGGATTTGTTAGATGATATGTTTAATAAGGGTTTCGTGCCAGATACATTGAGCTATACCAGTTTGTTGAATAGTTTATGTAGGAAGAAGAAGCTTAGGGAGGCTTATAAGTTGTTATGCAGGATGAAAGTTAAGGGTTGTAACCCTAATCTCATACATTATAATACAGTTATGTTGGGTGTATGTCGAGAGGGGCGAGCACACCAGGCCATCAAGATTTTGGATGATATGTATTTGAATGGATGTTTGCCAAATTTGGTGTCTTATCGAACATTGGTTGGTGGTTTGGTTGATCAAGGGATGTATGATGAAGCGAGGAAGTACATGGAGGAAATGATTTCAAAAGGTTGTTCTCCTCATTTTTCAATAACTCATTCCTTGATCAAGGGTTTGTGTACTGTTGGTAGAACCGAGGAAGCTTCTGAGGTGCTAGGGGAGCTTTTAAAACACGGTGAAGTACCATATATTGGTACATGGCAAGAAGTCATACCCAGGATTTGCGAGGTAGAGGAGATGGAAGGCTTGGATGGGTTTTTGGATGAGGTGATTAAGGTTGACATAAAACCTTATACAAGGATAATTGAGGCAGGAGCTGCTTTAGAGGAATATTTGATCAAGAAGATACGAGCAAATTCTGGGAAATTTTGA

mRNA sequence

ATGCATCAAACTCCTGCGCGATTATGCAACAATCTTCAACGTATCACTCGCAATCTTTCTCTTCCCCCAACAATCTGCTTCCACTCTTCTTCAATCCATCCAGAAAATCACCACCATGATAAACCGCCACCACTACCACCACCATTATCACACCAAACAAGATATAACCCAGAATCCCAAAATGATTTACAATCATTCTCAAGAACCCTAATTGCTTCCCCAAATCGAATCCACAAGCTGATTTCCTCTCAATCAGACCCTCTTTTAGCCAAAGAAATCTTTGATTTAGCCTCTCGCCAACCCAATTTCCGCCATTCTTACCCCACTTTCCACACTCTGATCATCAAATTGGGAAATGCTCGTCAATTCTCGCTCATGGAGAAGCTTCTTTCTCAGCTCAAACGCCTTCGTTACCCTACAACTCCAGGTCTGTTTTCTCGCTTAATTTGCATTTACGGCGATGCCCATATGCCTGAAAAGGCCCTTAAGATGTTCTATAGCATCGTTGAGTTTAACTGTAATCCCACCTCGAAACACCTGAATCATGTTCTTTCTATTCTCGTGGCTCAGCGGAGCTTTCTTCGGCCTGCTTTTGATCTTTTTAGGATTGCACATAAGTATGCAGTGGACCCAAATGTGAAATCTTACAACATTTTGATGAGGGCTTTCTGTGGTAATGATGAACTTAGTGTTGCCTATAAGCTGTTCAACGATATGCTTAAGAGAGAGATTTTGCCTGATGTTGAATCTTATAGAATTTTGATGCAGGCATTGTGTAGGAAGAGTCAAGTGACTAAAGCTATGGATTTGTTAGATGATATGTTTAATAAGGGTTTCGTGCCAGATACATTGAGCTATACCAGTTTGTTGAATAGTTTATGTAGGAAGAAGAAGCTTAGGGAGGCTTATAAGTTGTTATGCAGGATGAAAGTTAAGGGTTGTAACCCTAATCTCATACATTATAATACAGTTATGTTGGGTGTATGTCGAGAGGGGCGAGCACACCAGGCCATCAAGATTTTGGATGATATGTATTTGAATGGATGTTTGCCAAATTTGGTGTCTTATCGAACATTGGTTGGTGGTTTGGTTGATCAAGGGATGTATGATGAAGCGAGGAAGTACATGGAGGAAATGATTTCAAAAGGTTGTTCTCCTCATTTTTCAATAACTCATTCCTTGATCAAGGGTTTGTGTACTGTTGGTAGAACCGAGGAAGCTTCTGAGGTGCTAGGGGAGCTTTTAAAACACGGTGAAGTACCATATATTGGTACATGGCAAGAAGTCATACCCAGGATTTGCGAGGTAGAGGAGATGGAAGGCTTGGATGGGTTTTTGGATGAGGTGATTAAGGTTGACATAAAACCTTATACAAGGATAATTGAGGCAGGAGCTGCTTTAGAGGAATATTTGATCAAGAAGATACGAGCAAATTCTGGGAAATTTTGA

Coding sequence (CDS)

ATGCATCAAACTCCTGCGCGATTATGCAACAATCTTCAACGTATCACTCGCAATCTTTCTCTTCCCCCAACAATCTGCTTCCACTCTTCTTCAATCCATCCAGAAAATCACCACCATGATAAACCGCCACCACTACCACCACCATTATCACACCAAACAAGATATAACCCAGAATCCCAAAATGATTTACAATCATTCTCAAGAACCCTAATTGCTTCCCCAAATCGAATCCACAAGCTGATTTCCTCTCAATCAGACCCTCTTTTAGCCAAAGAAATCTTTGATTTAGCCTCTCGCCAACCCAATTTCCGCCATTCTTACCCCACTTTCCACACTCTGATCATCAAATTGGGAAATGCTCGTCAATTCTCGCTCATGGAGAAGCTTCTTTCTCAGCTCAAACGCCTTCGTTACCCTACAACTCCAGGTCTGTTTTCTCGCTTAATTTGCATTTACGGCGATGCCCATATGCCTGAAAAGGCCCTTAAGATGTTCTATAGCATCGTTGAGTTTAACTGTAATCCCACCTCGAAACACCTGAATCATGTTCTTTCTATTCTCGTGGCTCAGCGGAGCTTTCTTCGGCCTGCTTTTGATCTTTTTAGGATTGCACATAAGTATGCAGTGGACCCAAATGTGAAATCTTACAACATTTTGATGAGGGCTTTCTGTGGTAATGATGAACTTAGTGTTGCCTATAAGCTGTTCAACGATATGCTTAAGAGAGAGATTTTGCCTGATGTTGAATCTTATAGAATTTTGATGCAGGCATTGTGTAGGAAGAGTCAAGTGACTAAAGCTATGGATTTGTTAGATGATATGTTTAATAAGGGTTTCGTGCCAGATACATTGAGCTATACCAGTTTGTTGAATAGTTTATGTAGGAAGAAGAAGCTTAGGGAGGCTTATAAGTTGTTATGCAGGATGAAAGTTAAGGGTTGTAACCCTAATCTCATACATTATAATACAGTTATGTTGGGTGTATGTCGAGAGGGGCGAGCACACCAGGCCATCAAGATTTTGGATGATATGTATTTGAATGGATGTTTGCCAAATTTGGTGTCTTATCGAACATTGGTTGGTGGTTTGGTTGATCAAGGGATGTATGATGAAGCGAGGAAGTACATGGAGGAAATGATTTCAAAAGGTTGTTCTCCTCATTTTTCAATAACTCATTCCTTGATCAAGGGTTTGTGTACTGTTGGTAGAACCGAGGAAGCTTCTGAGGTGCTAGGGGAGCTTTTAAAACACGGTGAAGTACCATATATTGGTACATGGCAAGAAGTCATACCCAGGATTTGCGAGGTAGAGGAGATGGAAGGCTTGGATGGGTTTTTGGATGAGGTGATTAAGGTTGACATAAAACCTTATACAAGGATAATTGAGGCAGGAGCTGCTTTAGAGGAATATTTGATCAAGAAGATACGAGCAAATTCTGGGAAATTTTGA

Protein sequence

MHQTPARLCNNLQRITRNLSLPPTICFHSSSIHPENHHHDKPPPLPPPLSHQTRYNPESQNDLQSFSRTLIASPNRIHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNARQFSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHLNHVLSILVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDMLKREILPDVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLREAYKLLCRMKVKGCNPNLIHYNTVMLGVCREGRAHQAIKILDDMYLNGCLPNLVSYRTLVGGLVDQGMYDEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEVPYIGTWQEVIPRICEVEEMEGLDGFLDEVIKVDIKPYTRIIEAGAALEEYLIKKIRANSGKF
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo25844.1Spo25844.1mRNA


Homology
BLAST of Spo25844.1 vs. NCBI nr
Match: gi|902156416|gb|KNA06011.1| (hypothetical protein SOVF_185020 [Spinacia oleracea])

HSP 1 Score: 981.9 bits (2537), Expect = 4.100e-283
Identity = 481/482 (99.79%), Postives = 482/482 (100.00%), Query Frame = 1

		  

Query: 1   MHQTPARLCNNLQRITRNLSLPPTICFHSSSIHPENHHHDKPPPLPPPLSHQTRYNPESQ 60
           MHQTPARLCNNLQRITRNLSLPPTICFHSSSIHPENHHHDKPPPLPPPLSHQTRYNPESQ
Sbjct: 1   MHQTPARLCNNLQRITRNLSLPPTICFHSSSIHPENHHHDKPPPLPPPLSHQTRYNPESQ 60

Query: 61  NDLQSFSRTLIASPNRIHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNA 120
           NDLQSFSRTLIASPNRIHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNA
Sbjct: 61  NDLQSFSRTLIASPNRIHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNA 120

Query: 121 RQFSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHL 180
           RQFSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHL
Sbjct: 121 RQFSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHL 180

Query: 181 NHVLSILVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDML 240
           NHVLSILVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDML
Sbjct: 181 NHVLSILVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDML 240

Query: 241 KREILPDVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLR 300
           KREILPDVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLR
Sbjct: 241 KREILPDVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLR 300

Query: 301 EAYKLLCRMKVKGCNPNLIHYNTVMLGVCREGRAHQAIKILDDMYLNGCLPNLVSYRTLV 360
           EAYKLLCRMKVKGCNPNLIHYNTVMLG+CREGRAHQAIKILDDMYLNGCLPNLVSYRTLV
Sbjct: 301 EAYKLLCRMKVKGCNPNLIHYNTVMLGLCREGRAHQAIKILDDMYLNGCLPNLVSYRTLV 360

Query: 361 GGLVDQGMYDEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEV 420
           GGLVDQGMYDEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEV
Sbjct: 361 GGLVDQGMYDEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEV 420

Query: 421 PYIGTWQEVIPRICEVEEMEGLDGFLDEVIKVDIKPYTRIIEAGAALEEYLIKKIRANSG 480
           PYIGTWQEVIPRICEVEEMEGLDGFLDEVIKVDIKPYTRIIEAGAALEEYLIKKIRANSG
Sbjct: 421 PYIGTWQEVIPRICEVEEMEGLDGFLDEVIKVDIKPYTRIIEAGAALEEYLIKKIRANSG 480

Query: 481 KF 483
           KF
Sbjct: 481 KF 482

BLAST of Spo25844.1 vs. NCBI nr
Match: gi|731311092|ref|XP_010689086.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g01400, mitochondrial-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 778.1 bits (2008), Expect = 9.000e-222
Identity = 384/475 (80.84%), Postives = 423/475 (89.05%), Query Frame = 1

		  

Query: 7   RLCNNLQRITRNLSLPPTICFHSSSIHPENHHHDKPPPLPPPLSHQTRYNPESQNDLQSF 66
           R  N+L R TR+ SLP ++  HSS I+P+ +HH+K  P     S +TR NPESQNDL  F
Sbjct: 3   RSYNSLLRNTRHFSLPQSLFLHSS-INPQYYHHEKEKPS----SQETRKNPESQNDLDFF 62

Query: 67  SRTLIASPNRIHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNARQFSLM 126
           S+TLIASP +IHKLISSQSDPLLAKEIFDLASRQPNFRHSY TFHTLI+KLGNARQFSLM
Sbjct: 63  SKTLIASPTQIHKLISSQSDPLLAKEIFDLASRQPNFRHSYSTFHTLILKLGNARQFSLM 122

Query: 127 EKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHLNHVLSI 186
           E LLSQLKRLR+ TTPGLFSR+ICIYGDAH+PEKALK FYSI+E+NCNPTSKHLNHVL I
Sbjct: 123 ENLLSQLKRLRFDTTPGLFSRVICIYGDAHLPEKALKTFYSIIEYNCNPTSKHLNHVLKI 182

Query: 187 LVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDMLKREILP 246
           LVAQR+F+RPAFDLFR+AHK+ + PNV+SYNILMRAFC NDELSVAYKLFN+MLKR+ILP
Sbjct: 183 LVAQRNFIRPAFDLFRVAHKFEITPNVESYNILMRAFCYNDELSVAYKLFNEMLKRDILP 242

Query: 247 DVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLREAYKLL 306
           DVESYRILMQALCRKSQVTKAMDLL DM NKGFVPDTLSYTSLLNSLCRKKKL+EAYKLL
Sbjct: 243 DVESYRILMQALCRKSQVTKAMDLLGDMLNKGFVPDTLSYTSLLNSLCRKKKLKEAYKLL 302

Query: 307 CRMKVKGCNPNLIHYNTVMLGVCREGRAHQAIKILDDMYLNGCLPNLVSYRTLVGGLVDQ 366
           CRMKVKGCNPN+ HYNTV+LG+CREGRA  AIK+LDDMY NGCLPNLVSYRTLVGGL+DQ
Sbjct: 303 CRMKVKGCNPNITHYNTVILGLCREGRASDAIKVLDDMYSNGCLPNLVSYRTLVGGLIDQ 362

Query: 367 GMYDEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEVPYIGTW 426
           GMYDEA+KYMEEMI KG SPHFSIT +LIKGLC VGR EEAS +LGELLKHGE P+ GTW
Sbjct: 363 GMYDEAKKYMEEMILKGFSPHFSITQTLIKGLCNVGRIEEASALLGELLKHGEAPHAGTW 422

Query: 427 QEVIPRICEVEEMEGLDGFLDEVIKVDIKPYTRIIEAGAALEEYLIKKIRANSGK 482
           QEVI +ICE EEME LD  LDEVIKVD+KP+TRI+EAG ALEEYLIKKI ANS K
Sbjct: 423 QEVISKICEAEEMERLDRLLDEVIKVDLKPHTRIVEAGVALEEYLIKKIHANSWK 472

BLAST of Spo25844.1 vs. NCBI nr
Match: gi|720046138|ref|XP_010270410.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g01400, mitochondrial-like [Nelumbo nucifera])

HSP 1 Score: 590.1 bits (1520), Expect = 3.500e-165
Identity = 288/455 (63.30%), Postives = 353/455 (77.58%), Query Frame = 1

		  

Query: 27  FHSSSIHPENHHHDKPPPLPPPLSHQTRYNPESQNDLQSFSRTLIASPNRIHKLISSQSD 86
           FHSSS   + H H +PPP            P S+      S T I SP RI KLI+SQ+D
Sbjct: 27  FHSSSSAFQLHQHQEPPP------------PSSK------SPTSIGSPARIQKLIASQTD 86

Query: 87  PLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNARQFSLMEKLLSQLKRLRYPTTPGLFS 146
           PL+AKEIFDLASRQ NFRHSY +FHTLI KLG A  FSLM+ L+ +LK   Y  TPGLFS
Sbjct: 87  PLVAKEIFDLASRQSNFRHSYSSFHTLICKLGRAHYFSLMDNLMRRLKSDGYSVTPGLFS 146

Query: 147 RLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHLNHVLSILVAQRSFLRPAFDLFRIAHK 206
            +I IYGDA MP+KALK FY+++EF+C P ++H NH++ +LV+ R++LR AF LFR + +
Sbjct: 147 DVIQIYGDAKMPDKALKTFYTMLEFDCKPLARHFNHLIQVLVSHRTYLRTAFHLFRDSGR 206

Query: 207 YAVDPNVKSYNILMRAFCGNDELSVAYKLFNDMLKREILPDVESYRILMQALCRKSQVTK 266
             +  N K+YNILMRAFC NDELS+AY LFN M KR+I+PDVESYRILMQ LCRKSQVT+
Sbjct: 207 LGISTNTKTYNILMRAFCFNDELSIAYSLFNQMFKRDIVPDVESYRILMQGLCRKSQVTR 266

Query: 267 AMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLREAYKLLCRMKVKGCNPNLIHYNTVML 326
           A+DLLDDM NKGFVPDTL+YT+LLNSLCRKKKLREAYKLLCRMKVKGCNP+++HYNTV+L
Sbjct: 267 AVDLLDDMLNKGFVPDTLTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVIL 326

Query: 327 GVCREGRAHQAIKILDDMYLNGCLPNLVSYRTLVGGLVDQGMYDEARKYMEEMISKGCSP 386
           G CREGRA  A K+L+DM  NGC+PNLVSYRTLVGGL + GM DEA+KYM EMISKG SP
Sbjct: 327 GFCREGRALDACKVLEDMPSNGCIPNLVSYRTLVGGLCNMGMLDEAKKYMYEMISKGFSP 386

Query: 387 HFSITHSLIKGLCTVGRTEEASEVLGELLKHGEVPYIGTWQEVIPRICEVEEMEGLDGFL 446
           HFS+ H+L+KG C VG+ EEA EVLGE+L+HGE P+  TW E++PRIC+ +E+  +   L
Sbjct: 387 HFSVFHALVKGFCIVGKMEEACEVLGEMLRHGEAPHTDTWVEIVPRICDTDEIMRMGDVL 446

Query: 447 DEVIKVDIKPYTRIIEAGAALEEYLIKKIRANSGK 482
            +++KV+IK  TRI+EAG  LEEY+++K R  S K
Sbjct: 447 GKIMKVEIKRDTRIVEAGPLLEEYMVRKTRHKSWK 463

BLAST of Spo25844.1 vs. NCBI nr
Match: gi|698461242|ref|XP_009781730.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g01400, mitochondrial-like [Nicotiana sylvestris])

HSP 1 Score: 580.1 bits (1494), Expect = 3.600e-162
Identity = 285/445 (64.04%), Postives = 348/445 (78.20%), Query Frame = 1

		  

Query: 37  HHHDKPPPLPPPLSHQTRYNPESQNDLQSFSRTLIASPNRIHKLISSQSDPLLAKEIFDL 96
           H+H + P        Q + + + QN  Q  S   I SP RI KLI+SQSDPLLAKEIFDL
Sbjct: 39  HYHTRQPEQD---RKQIQTDEQKQNKKQGPS---IGSPARIQKLIASQSDPLLAKEIFDL 98

Query: 97  ASRQPNFRHSYPTFHTLIIKLGNARQFSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAH 156
           ASR+P+FRHSY TFHTLI+KLG + QFSLM+ +LS LK  +Y  +P LFS +I IYGDA 
Sbjct: 99  ASREPDFRHSYATFHTLILKLGRSHQFSLMQSVLSSLKSQQYSVSPSLFSHIIQIYGDAG 158

Query: 157 MPEKALKMFYSIVEFNCNPTSKHLNHVLSILVAQRSFLRPAFDLFRIAHKYAVDPNVKSY 216
           +P+KALK FY+I+EFN  P  KHLN +L ILV+ R+FLRPAFDLF+ AHKY V  N  SY
Sbjct: 159 LPDKALKTFYTILEFNMKPLPKHLNLILEILVSHRNFLRPAFDLFKSAHKYGVLANTTSY 218

Query: 217 NILMRAFCGNDELSVAYKLFNDMLKREILPDVESYRILMQALCRKSQVTKAMDLLDDMFN 276
           NILMRAFC ND+LS+AY LFN M KR+I PDVESYRILMQ LCRKSQV KA+DLL+DM N
Sbjct: 219 NILMRAFCLNDDLSIAYSLFNQMFKRDIAPDVESYRILMQGLCRKSQVNKAVDLLEDMLN 278

Query: 277 KGFVPDTLSYTSLLNSLCRKKKLREAYKLLCRMKVKGCNPNLIHYNTVMLGVCREGRAHQ 336
           KGFVPD LSY++LLNSLCRKKKL+EAYK+LCRMKVKGCNP+++HYNTV+LG CREGRA  
Sbjct: 279 KGFVPDALSYSTLLNSLCRKKKLKEAYKILCRMKVKGCNPDIVHYNTVILGFCREGRAAD 338

Query: 337 AIKILDDMYLNGCLPNLVSYRTLVGGLVDQGMYDEARKYMEEMISKGCSPHFSITHSLIK 396
           A K+L+DM  NGCLPNLVSYRTLVGGL DQGMYDEA+ YMEEM+SKG SPHFS+ H+++K
Sbjct: 339 ACKVLEDMPSNGCLPNLVSYRTLVGGLSDQGMYDEAKNYMEEMMSKGFSPHFSVVHAVVK 398

Query: 397 GLCTVGRTEEASEVLGELLKHGEVPYIGTWQEVIPRICEVEEMEGLDGFLDEVIKVDIKP 456
           G C +G+ EEA  V+G++L HGE  +  TW E++ RI E ++ E +   L+E+I+ +IKP
Sbjct: 399 GFCNIGKLEEACGVVGDILSHGEALHTETWGEIVSRISEWDDAE-IGNILEEIIRAEIKP 458

Query: 457 YTRIIEAGAALEEYLIKKIRANSGK 482
            TRI+E GA L EYL+ KI++ S K
Sbjct: 459 ETRIVEVGARLGEYLMNKIKSKSRK 476

BLAST of Spo25844.1 vs. NCBI nr
Match: gi|590720792|ref|XP_007051427.1| (Pentatricopeptide repeat-containing protein, mitochondrial [Theobroma cacao])

HSP 1 Score: 577.8 bits (1488), Expect = 1.800e-161
Identity = 288/475 (60.63%), Postives = 359/475 (75.58%), Query Frame = 1

		  

Query: 8   LCNNLQRITRNLSLPPT---ICFHSSSIHPENHHHDKPPPLPPPLSHQTRYNPESQNDLQ 67
           L ++ + ++R+L+ PP    + F SSS  P   H  +PP                     
Sbjct: 5   LFSSSKTVSRSLTFPPKPPFLFFRSSSSSPGPPHKQQPPRT------------------- 64

Query: 68  SFSRTLIASPNRIHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNARQFS 127
               + I SP R+ KLIS+QSDPLLAKEIFD AS Q  FRHSY +F  LI+KLG ++ FS
Sbjct: 65  --CTSAIGSPARVPKLISAQSDPLLAKEIFDYASNQLGFRHSYSSFLVLILKLGRSKHFS 124

Query: 128 LMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHLNHVL 187
           L++ LL +LK  RYP TP LFS LI IY +A++PE+ALK FY ++EFN  P  KHLN +L
Sbjct: 125 LVDDLLIRLKTDRYPVTPTLFSYLIKIYAEANLPERALKTFYKMLEFNIKPLPKHLNRIL 184

Query: 188 SILVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDMLKREI 247
            +LV+ R+FL PAFDLF+ AHK+ V PN KSYNILM AFC N +LSVAYKLFN M +R++
Sbjct: 185 ELLVSHRNFLMPAFDLFKNAHKHGVLPNTKSYNILMGAFCLNGDLSVAYKLFNKMFERDV 244

Query: 248 LPDVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLREAYK 307
           +PDVESYRILMQ LCRKSQV  A+DLL+D+ NKGF+PD+LSYT+LLNSLCRKKKLREAYK
Sbjct: 245 VPDVESYRILMQGLCRKSQVNTAVDLLEDILNKGFIPDSLSYTTLLNSLCRKKKLREAYK 304

Query: 308 LLCRMKVKGCNPNLIHYNTVMLGVCREGRAHQAIKILDDMYLNGCLPNLVSYRTLVGGLV 367
           LLCRMKVKGCNP+L+HYNTV+LG CREGRA  A+K+L+DM  NGCLPNLVSYRTL+GGL 
Sbjct: 305 LLCRMKVKGCNPDLVHYNTVILGFCREGRALDAVKVLEDMPSNGCLPNLVSYRTLIGGLC 364

Query: 368 DQGMYDEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEVPYIG 427
           DQGM+DEA+KYMEEM+ KG SPHFS++H+L+KG C VG+ EEA  V GE+LK+GEVP++ 
Sbjct: 365 DQGMFDEAKKYMEEMLIKGFSPHFSVSHTLVKGFCNVGKIEEAIGVFGEMLKYGEVPHMD 424

Query: 428 TWQEVIPRICEVEEMEGLDGFLDEVIKVDIKPYTRIIEAGAALEEYLIKKIRANS 480
           TW  +IPRICE  E E +   L+EV+KV+IK  TRI++AG  LE+YLI+KIR+ S
Sbjct: 425 TWVLIIPRICEDYETERMGEILEEVMKVEIKRDTRIVDAGTGLEDYLIRKIRSRS 458

BLAST of Spo25844.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHB9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_185020 PE=4 SV=1)

HSP 1 Score: 981.9 bits (2537), Expect = 2.900e-283
Identity = 481/482 (99.79%), Postives = 482/482 (100.00%), Query Frame = 1

		  

Query: 1   MHQTPARLCNNLQRITRNLSLPPTICFHSSSIHPENHHHDKPPPLPPPLSHQTRYNPESQ 60
           MHQTPARLCNNLQRITRNLSLPPTICFHSSSIHPENHHHDKPPPLPPPLSHQTRYNPESQ
Sbjct: 1   MHQTPARLCNNLQRITRNLSLPPTICFHSSSIHPENHHHDKPPPLPPPLSHQTRYNPESQ 60

Query: 61  NDLQSFSRTLIASPNRIHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNA 120
           NDLQSFSRTLIASPNRIHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNA
Sbjct: 61  NDLQSFSRTLIASPNRIHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNA 120

Query: 121 RQFSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHL 180
           RQFSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHL
Sbjct: 121 RQFSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHL 180

Query: 181 NHVLSILVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDML 240
           NHVLSILVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDML
Sbjct: 181 NHVLSILVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDML 240

Query: 241 KREILPDVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLR 300
           KREILPDVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLR
Sbjct: 241 KREILPDVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLR 300

Query: 301 EAYKLLCRMKVKGCNPNLIHYNTVMLGVCREGRAHQAIKILDDMYLNGCLPNLVSYRTLV 360
           EAYKLLCRMKVKGCNPNLIHYNTVMLG+CREGRAHQAIKILDDMYLNGCLPNLVSYRTLV
Sbjct: 301 EAYKLLCRMKVKGCNPNLIHYNTVMLGLCREGRAHQAIKILDDMYLNGCLPNLVSYRTLV 360

Query: 361 GGLVDQGMYDEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEV 420
           GGLVDQGMYDEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEV
Sbjct: 361 GGLVDQGMYDEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEV 420

Query: 421 PYIGTWQEVIPRICEVEEMEGLDGFLDEVIKVDIKPYTRIIEAGAALEEYLIKKIRANSG 480
           PYIGTWQEVIPRICEVEEMEGLDGFLDEVIKVDIKPYTRIIEAGAALEEYLIKKIRANSG
Sbjct: 421 PYIGTWQEVIPRICEVEEMEGLDGFLDEVIKVDIKPYTRIIEAGAALEEYLIKKIRANSG 480

Query: 481 KF 483
           KF
Sbjct: 481 KF 482

BLAST of Spo25844.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D354_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g002130 PE=4 SV=1)

HSP 1 Score: 778.1 bits (2008), Expect = 6.300e-222
Identity = 384/475 (80.84%), Postives = 423/475 (89.05%), Query Frame = 1

		  

Query: 7   RLCNNLQRITRNLSLPPTICFHSSSIHPENHHHDKPPPLPPPLSHQTRYNPESQNDLQSF 66
           R  N+L R TR+ SLP ++  HSS I+P+ +HH+K  P     S +TR NPESQNDL  F
Sbjct: 3   RSYNSLLRNTRHFSLPQSLFLHSS-INPQYYHHEKEKPS----SQETRKNPESQNDLDFF 62

Query: 67  SRTLIASPNRIHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNARQFSLM 126
           S+TLIASP +IHKLISSQSDPLLAKEIFDLASRQPNFRHSY TFHTLI+KLGNARQFSLM
Sbjct: 63  SKTLIASPTQIHKLISSQSDPLLAKEIFDLASRQPNFRHSYSTFHTLILKLGNARQFSLM 122

Query: 127 EKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHLNHVLSI 186
           E LLSQLKRLR+ TTPGLFSR+ICIYGDAH+PEKALK FYSI+E+NCNPTSKHLNHVL I
Sbjct: 123 ENLLSQLKRLRFDTTPGLFSRVICIYGDAHLPEKALKTFYSIIEYNCNPTSKHLNHVLKI 182

Query: 187 LVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDMLKREILP 246
           LVAQR+F+RPAFDLFR+AHK+ + PNV+SYNILMRAFC NDELSVAYKLFN+MLKR+ILP
Sbjct: 183 LVAQRNFIRPAFDLFRVAHKFEITPNVESYNILMRAFCYNDELSVAYKLFNEMLKRDILP 242

Query: 247 DVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLREAYKLL 306
           DVESYRILMQALCRKSQVTKAMDLL DM NKGFVPDTLSYTSLLNSLCRKKKL+EAYKLL
Sbjct: 243 DVESYRILMQALCRKSQVTKAMDLLGDMLNKGFVPDTLSYTSLLNSLCRKKKLKEAYKLL 302

Query: 307 CRMKVKGCNPNLIHYNTVMLGVCREGRAHQAIKILDDMYLNGCLPNLVSYRTLVGGLVDQ 366
           CRMKVKGCNPN+ HYNTV+LG+CREGRA  AIK+LDDMY NGCLPNLVSYRTLVGGL+DQ
Sbjct: 303 CRMKVKGCNPNITHYNTVILGLCREGRASDAIKVLDDMYSNGCLPNLVSYRTLVGGLIDQ 362

Query: 367 GMYDEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEVPYIGTW 426
           GMYDEA+KYMEEMI KG SPHFSIT +LIKGLC VGR EEAS +LGELLKHGE P+ GTW
Sbjct: 363 GMYDEAKKYMEEMILKGFSPHFSITQTLIKGLCNVGRIEEASALLGELLKHGEAPHAGTW 422

Query: 427 QEVIPRICEVEEMEGLDGFLDEVIKVDIKPYTRIIEAGAALEEYLIKKIRANSGK 482
           QEVI +ICE EEME LD  LDEVIKVD+KP+TRI+EAG ALEEYLIKKI ANS K
Sbjct: 423 QEVISKICEAEEMERLDRLLDEVIKVDLKPHTRIVEAGVALEEYLIKKIHANSWK 472

BLAST of Spo25844.1 vs. UniProtKB/TrEMBL
Match: A0A061DS01_THECC (Pentatricopeptide repeat-containing protein, mitochondrial OS=Theobroma cacao GN=TCM_005036 PE=4 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 1.200e-161
Identity = 288/475 (60.63%), Postives = 359/475 (75.58%), Query Frame = 1

		  

Query: 8   LCNNLQRITRNLSLPPT---ICFHSSSIHPENHHHDKPPPLPPPLSHQTRYNPESQNDLQ 67
           L ++ + ++R+L+ PP    + F SSS  P   H  +PP                     
Sbjct: 5   LFSSSKTVSRSLTFPPKPPFLFFRSSSSSPGPPHKQQPPRT------------------- 64

Query: 68  SFSRTLIASPNRIHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNARQFS 127
               + I SP R+ KLIS+QSDPLLAKEIFD AS Q  FRHSY +F  LI+KLG ++ FS
Sbjct: 65  --CTSAIGSPARVPKLISAQSDPLLAKEIFDYASNQLGFRHSYSSFLVLILKLGRSKHFS 124

Query: 128 LMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHLNHVL 187
           L++ LL +LK  RYP TP LFS LI IY +A++PE+ALK FY ++EFN  P  KHLN +L
Sbjct: 125 LVDDLLIRLKTDRYPVTPTLFSYLIKIYAEANLPERALKTFYKMLEFNIKPLPKHLNRIL 184

Query: 188 SILVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDMLKREI 247
            +LV+ R+FL PAFDLF+ AHK+ V PN KSYNILM AFC N +LSVAYKLFN M +R++
Sbjct: 185 ELLVSHRNFLMPAFDLFKNAHKHGVLPNTKSYNILMGAFCLNGDLSVAYKLFNKMFERDV 244

Query: 248 LPDVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLREAYK 307
           +PDVESYRILMQ LCRKSQV  A+DLL+D+ NKGF+PD+LSYT+LLNSLCRKKKLREAYK
Sbjct: 245 VPDVESYRILMQGLCRKSQVNTAVDLLEDILNKGFIPDSLSYTTLLNSLCRKKKLREAYK 304

Query: 308 LLCRMKVKGCNPNLIHYNTVMLGVCREGRAHQAIKILDDMYLNGCLPNLVSYRTLVGGLV 367
           LLCRMKVKGCNP+L+HYNTV+LG CREGRA  A+K+L+DM  NGCLPNLVSYRTL+GGL 
Sbjct: 305 LLCRMKVKGCNPDLVHYNTVILGFCREGRALDAVKVLEDMPSNGCLPNLVSYRTLIGGLC 364

Query: 368 DQGMYDEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEVPYIG 427
           DQGM+DEA+KYMEEM+ KG SPHFS++H+L+KG C VG+ EEA  V GE+LK+GEVP++ 
Sbjct: 365 DQGMFDEAKKYMEEMLIKGFSPHFSVSHTLVKGFCNVGKIEEAIGVFGEMLKYGEVPHMD 424

Query: 428 TWQEVIPRICEVEEMEGLDGFLDEVIKVDIKPYTRIIEAGAALEEYLIKKIRANS 480
           TW  +IPRICE  E E +   L+EV+KV+IK  TRI++AG  LE+YLI+KIR+ S
Sbjct: 425 TWVLIIPRICEDYETERMGEILEEVMKVEIKRDTRIVDAGTGLEDYLIRKIRSRS 458

BLAST of Spo25844.1 vs. UniProtKB/TrEMBL
Match: M5XNI8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021922mg PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 1.100e-160
Identity = 279/436 (63.99%), Postives = 345/436 (79.13%), Query Frame = 1

		  

Query: 43  PPLPPPLSHQTR-YNPESQNDLQSFSRTLIASPNRIHKLISSQSDPLLAKEIFDLASRQP 102
           PP PP  S  +  +   SQ   Q+     I SP+RI  LI+SQSDPLLAKEIFDLA+RQP
Sbjct: 24  PPKPPSSSSSSSVFFLSSQPHNQNHEIGSIGSPSRIQNLIASQSDPLLAKEIFDLAARQP 83

Query: 103 NFRHSYPTFHTLIIKLGNARQFSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKA 162
           +FRHSY +F TLI+KLG ++ FSL++ LL +LK   Y  +P LF+ LI IYG+A++P+KA
Sbjct: 84  HFRHSYSSFFTLILKLGRSKYFSLVDDLLIRLKTQNYSVSPALFAHLIKIYGEANLPQKA 143

Query: 163 LKMFYSIVEFNCNPTSKHLNHVLSILVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNILMR 222
           L+ FY++VEF+C P+ KHLN +L ILV+ R+FLRPAFD+F+ AH++ V PN +SYNILMR
Sbjct: 144 LRTFYTMVEFDCRPSVKHLNRILQILVSHRNFLRPAFDVFKDAHRHGVMPNTQSYNILMR 203

Query: 223 AFCGNDELSVAYKLFNDMLKREILPDVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVP 282
           AFC N +LS+AY+LFN M +R+++PDV+SYRILMQ LCRK QV  A+D L+DM NKGFVP
Sbjct: 204 AFCLNGDLSIAYQLFNKMFERDLVPDVQSYRILMQGLCRKGQVNTAVDFLEDMLNKGFVP 263

Query: 283 DTLSYTSLLNSLCRKKKLREAYKLLCRMKVKGCNPNLIHYNTVMLGVCREGRAHQAIKIL 342
           D+LSYTSLLNSLCRKKKLREAYKLLCRMKVKGCNP+++HYNTV+LG CREGR   A K+L
Sbjct: 264 DSLSYTSLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRPVDACKVL 323

Query: 343 DDMYLNGCLPNLVSYRTLVGGLVDQGMYDEARKYMEEMISKGCSPHFSITHSLIKGLCTV 402
           +DM  NGCLPNLVSYRTLV GL D GM DEA+ YME MIS+G SPHFS+ H+L+KG C V
Sbjct: 324 EDMASNGCLPNLVSYRTLVSGLCDHGMLDEAKSYMETMISRGFSPHFSVVHALVKGFCNV 383

Query: 403 GRTEEASEVLGELLKHGEVPYIGTWQEVIPRICEVEEMEGLDGFLDEVIKVDIKPYTRII 462
           GR EEA  VL E+LKHGEVP+  TW  ++P ICE  E+E L+  L EV+KV+I+P TRI+
Sbjct: 384 GRVEEAFAVLEEVLKHGEVPHTDTWLTIVPGICEEIELERLEEILREVMKVEIRPNTRIV 443

Query: 463 EAGAALEEYLIKKIRA 478
           EA   LE+YLIKKIRA
Sbjct: 444 EAAIGLEDYLIKKIRA 459

BLAST of Spo25844.1 vs. UniProtKB/TrEMBL
Match: A0A166EQQ7_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007693 PE=4 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 3.100e-160
Identity = 274/421 (65.08%), Postives = 340/421 (80.76%), Query Frame = 1

		  

Query: 63  LQSFSRTLIASPNRIHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNARQ 122
           L S   T I S NR+ KLISSQSDPLLAKEIFDLAS QPNF  SY TFH+LI+KL + R 
Sbjct: 23  LHSSKPTSILSQNRVEKLISSQSDPLLAKEIFDLASIQPNFHPSYSTFHSLILKLAHTRH 82

Query: 123 FSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHLNH 182
           FS +  LL+QLK   YP +P LFSRLI +YG+ + PEKALKMF++I+EFN  P  +HLN 
Sbjct: 83  FSHVNSLLAQLKSRNYPISPSLFSRLIRVYGETNHPEKALKMFHTILEFNTKPLPRHLNA 142

Query: 183 VLSILVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDMLKR 242
           +L +LVA+R FLRPA DLFR AH+Y V  NV+SYN+LM AFC N +LS+AYKLFN+M KR
Sbjct: 143 ILRVLVARRGFLRPALDLFRSAHRYGVLANVESYNVLMSAFCLNGDLSIAYKLFNEMFKR 202

Query: 243 EILPDVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLREA 302
           +++PDVESYRI+MQ LCR+SQV+KA DLL+DM NKGFVPD LSYT+LLNSLCRKKKLREA
Sbjct: 203 DLVPDVESYRIVMQGLCRRSQVSKAADLLEDMLNKGFVPDALSYTTLLNSLCRKKKLREA 262

Query: 303 YKLLCRMKVKGCNPNLIHYNTVMLGVCREGRAHQAIKILDDMYLNGCLPNLVSYRTLVGG 362
           YKLLCRMKVKGCNP+++HYNT++ G CRE +A  AIK+L+DMY NGCLPNLVSYRTLVGG
Sbjct: 263 YKLLCRMKVKGCNPDIVHYNTLIFGFCRENKAVHAIKVLEDMYRNGCLPNLVSYRTLVGG 322

Query: 363 LVDQGMYDEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEVPY 422
           L +QG+YD+A KY +EMI KG SPHFS+ H LIKGLC VG+ EEA E+L E+LK GE P+
Sbjct: 323 LCNQGLYDDANKYTKEMIRKGFSPHFSVFHVLIKGLCNVGKIEEACELLVEMLKFGEAPH 382

Query: 423 IGTWQEVIPRICEVE-EMEGLDGFLDEVIKVDIKPYTRIIEAGAALEEYLIKKIRANSGK 482
           + TW E++ +IC+ E E+  ++  L +++KV+IKP+T+I+EAGA LEEY+ +KI+    K
Sbjct: 383 VDTWAEIVAQICDAEDEVLRVEDTLKKLLKVEIKPHTKIVEAGAGLEEYMNRKIQTRRKK 442

BLAST of Spo25844.1 vs. ExPASy Swiss-Prot
Match: PP298_ARATH (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana GN=At4g01400 PE=2 SV=2)

HSP 1 Score: 498.4 bits (1282), Expect = 8.600e-140
Identity = 239/438 (54.57%), Postives = 323/438 (73.74%), Query Frame = 1

		  

Query: 45  LPPPLSHQTRY------NPESQNDLQSFSRTLIASPNRIHKLISSQSDPLLAKEIFDLAS 104
           L  PLS  +R+        E++  + S  ++ I SP R+ KLI+SQSDPLLAKEIFD AS
Sbjct: 16  LTSPLSTSSRFLFYSSSEHEARKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYAS 75

Query: 105 RQPNFRHSYPTFHTLIIKLGNARQFSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMP 164
           +QPNFRHS  +   LI+KLG  R F+L++ +L++ +   YP T  +F+ LI +Y +A +P
Sbjct: 76  QQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLP 135

Query: 165 EKALKMFYSIVEFNCNPTSKHLNHVLSILVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNI 224
           EK L  FY ++EFN  P  KHLN +L +LV+ R +L+ AF+LF+ +  + V PN +SYN+
Sbjct: 136 EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNL 195

Query: 225 LMRAFCGNDELSVAYKLFNDMLKREILPDVESYRILMQALCRKSQVTKAMDLLDDMFNKG 284
           LM+AFC ND+LS+AY+LF  ML+R+++PDV+SY+IL+Q  CRK QV  AM+LLDDM NKG
Sbjct: 196 LMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG 255

Query: 285 FVPDTLSYTSLLNSLCRKKKLREAYKLLCRMKVKGCNPNLIHYNTVMLGVCREGRAHQAI 344
           FVPD LSYT+LLNSLCRK +LREAYKLLCRMK+KGCNP+L+HYNT++LG CRE RA  A 
Sbjct: 256 FVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDAR 315

Query: 345 KILDDMYLNGCLPNLVSYRTLVGGLVDQGMYDEARKYMEEMISKGCSPHFSITHSLIKGL 404
           K+LDDM  NGC PN VSYRTL+GGL DQGM+DE +KY+EEMISKG SPHFS+++ L+KG 
Sbjct: 316 KVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 375

Query: 405 CTVGRTEEASEVLGELLKHGEVPYIGTWQEVIPRICEVEEMEGLDGFLDEVIKVDIKPYT 464
           C+ G+ EEA +V+  ++K+GE  +  TW+ VIP IC  +E E +  FL++ +K +I   T
Sbjct: 376 CSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDT 435

Query: 465 RIIEAGAALEEYLIKKIR 477
           RI++ G  L  YL  K++
Sbjct: 436 RIVDVGIGLGSYLSSKLQ 453

BLAST of Spo25844.1 vs. ExPASy Swiss-Prot
Match: PP418_ARATH (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.400e-52
Identity = 114/372 (30.65%), Postives = 200/372 (53.76%), Query Frame = 1

		  

Query: 73  SPNRIHKLISSQSDPLLAKEIFDLASRQ--PNFRHSYPTFHTLIIKLGNARQFSLMEKLL 132
           +P+++ KL+ ++ D   +  +FD A+ +    + H   +F  ++++L +A +F   E L+
Sbjct: 15  TPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLI 74

Query: 133 SQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHLNHVLSILVAQ 192
            ++K      +  +   +   YG  H P  +L++F+ + +F+C+P+ K    VL+ILV +
Sbjct: 75  VRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEE 134

Query: 193 RSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGND-ELSVAYKLFNDMLKREILPDVE 252
              L  AF  ++   +  + P V S N+L++A C ND  +    K+F +M KR   PD  
Sbjct: 135 NQ-LNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSY 194

Query: 253 SYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLREAYKLLCRM 312
           +Y  L+  LCR  ++ +A  L  +M  K   P  ++YTSL+N LC  K + EA + L  M
Sbjct: 195 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 254

Query: 313 KVKGCNPNLIHYNTVMLGVCREGRAHQAIKILDDMYLNGCLPNLVSYRTLVGGLVDQGMY 372
           K KG  PN+  Y+++M G+C++GR+ QA+++ + M   GC PN+V+Y TL+ GL  +   
Sbjct: 255 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 314

Query: 373 DEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEVPYIGTW--- 432
            EA + ++ M  +G  P   +   +I G C + +  EA+  L E++  G  P   TW   
Sbjct: 315 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIH 374

Query: 433 ----QEVIPRIC 435
                EV+  +C
Sbjct: 375 VKTSNEVVRGLC 385

BLAST of Spo25844.1 vs. ExPASy Swiss-Prot
Match: PP327_ARATH (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.900e-48
Identity = 112/383 (29.24%), Postives = 207/383 (54.05%), Query Frame = 1

		  

Query: 56  NPESQNDLQSFSRTLIASPNRIHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLII 115
           NP + +    FS ++  SPN   +++ +  +  +++++F  A +  +F+    T  ++I 
Sbjct: 26  NPVNFSIHLRFSSSVSVSPNPSMEVVENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIE 85

Query: 116 KLGNARQFSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIV-EFNCN 175
              N+  F  +EKLLS+++          F  +   YG AH+P+KA+ +F+ +V EF C 
Sbjct: 86  SYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCK 145

Query: 176 PTSKHLNHVLSILVAQRSFLRPAFDLFRIAHKYA---VDPNVKSYNILMRAFCGNDELSV 235
            + K  N VL++++ +  + R       + +      + PN  S+N++++A C    +  
Sbjct: 146 RSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDR 205

Query: 236 AYKLFNDMLKREILPDVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLN 295
           A ++F  M +R+ LPD  +Y  LM  LC++ ++ +A+ LLD+M ++G  P  + Y  L++
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265

Query: 296 SLCRKKKLREAYKLLCRMKVKGCNPNLIHYNTVMLGVCREGRAHQAIKILDDMYLNGCLP 355
            LC+K  L    KL+  M +KGC PN + YNT++ G+C +G+  +A+ +L+ M  + C+P
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325

Query: 356 NLVSYRTLVGGLVDQGMYDEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVL 415
           N V+Y TL+ GLV Q    +A + +  M  +G   +  I   LI GL   G+ EEA  + 
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385

Query: 416 GELLKHGEVPYIGTWQEVIPRIC 435
            ++ + G  P I  +  ++  +C
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGLC 408

BLAST of Spo25844.1 vs. ExPASy Swiss-Prot
Match: PPR20_ARATH (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana GN=At1g07740 PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.400e-46
Identity = 108/341 (31.67%), Postives = 174/341 (51.03%), Query Frame = 1

		  

Query: 86  DPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNARQFSLMEKLLSQLKRLRYPTTPGLF 145
           DP  A  +F    ++  FRH YP++ +LI KL  +R F  ++++L  ++         LF
Sbjct: 61  DPEEALSLFH-QYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLF 120

Query: 146 SRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHLNHVLSILVAQRSFLRPAFDLFRIAH 205
             LI  YG A   +KA+ +F+ I  F+C  T + LN ++++LV     L  A   F  A 
Sbjct: 121 MGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLV-DNGELEKAKSFFDGAK 180

Query: 206 KYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDMLKREILPDVESYRILMQALCRKSQVT 265
              + PN  S+NIL++ F    +   A K+F++ML+ E+ P V +Y  L+  LCR   + 
Sbjct: 181 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 240

Query: 266 KAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLREAYKLLCRMKVKGCNPNLIHYNTVM 325
           KA  LL+DM  K   P+ +++  L+  LC K +  EA KL+  M+ +GC P L++Y  +M
Sbjct: 241 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILM 300

Query: 326 LGVCREGRAHQAIKILDDMYLNGCLPNLVSYRTLVGGLVDQGMYDEARKYMEEMISKGCS 385
             + + GR  +A  +L +M      P++V Y  LV  L  +    EA + + EM  KGC 
Sbjct: 301 SDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCK 360

Query: 386 PHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEVPYIGTW 427
           P+ +    +I G C +   +    VL  +L     P   T+
Sbjct: 361 PNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATF 399

BLAST of Spo25844.1 vs. ExPASy Swiss-Prot
Match: PP270_ARATH (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.200e-43
Identity = 114/406 (28.08%), Postives = 200/406 (49.26%), Query Frame = 1

		  

Query: 70  LIASPNR-------IHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNARQ 129
           L  SPN        + K +  +S   LA   F   +    F+H+  TF  +I KL    Q
Sbjct: 32  LTESPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQ 91

Query: 130 FSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHLNH 189
              ++ LL Q+K   +  +  LF  +I +Y    + E+A++MFY I EF C+P+ K  NH
Sbjct: 92  VDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNH 151

Query: 190 VLSILVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDMLKR 249
           VL  L+ +   ++  + ++R   +   +PNV +YN+L++A C N+++  A KL  +M  +
Sbjct: 152 VLDTLLGENR-IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 211

Query: 250 EILPDVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLREA 309
              PD  SY  ++ ++C    V +  +L +      F P    Y +L+N LC++   + A
Sbjct: 212 GCCPDAVSYTTVISSMCEVGLVKEGRELAE-----RFEPVVSVYNALINGLCKEHDYKGA 271

Query: 310 YKLLCRMKVKGCNPNLIHYNTVMLGVCREGRAHQAIKILDDMYLNGCLPNLVSYRTLVGG 369
           ++L+  M  KG +PN+I Y+T++  +C  G+   A   L  M   GC PN+ +  +LV G
Sbjct: 272 FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG 331

Query: 370 LVDQGMYDEARKYMEEMI-SKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEVP 429
              +G   +A     +MI   G  P+    ++L++G C+ G   +A  V   + + G  P
Sbjct: 332 CFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSP 391

Query: 430 YIGTWQEVIPRICEVEEMEGLDGFLDEVIKVDIKP----YTRIIEA 464
            I T+  +I    +   ++G     ++++     P    YT ++EA
Sbjct: 392 NIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431

BLAST of Spo25844.1 vs. TAIR (Arabidopsis)
Match: AT4G01400.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 278.5 bits (711), Expect = 7.900e-75
Identity = 143/344 (41.57%), Postives = 221/344 (64.24%), Query Frame = 1

		  

Query: 45  LPPPLSHQTRY------NPESQNDLQSFSRTLIASPNRIHKLISSQSDPLLAKEIFDLAS 104
           L  PLS  +R+        E++  + S  ++ I SP R+ KLI+SQSDPLLAKEIFD AS
Sbjct: 16  LTSPLSTSSRFLFYSSSEHEARKPIVSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYAS 75

Query: 105 RQPNFRHSYPTFHTLIIKLGNARQFSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMP 164
           +QPNFRHS  +   LI+KLG  R F+L++ +L++ +   YP T  +F+ LI +Y +A +P
Sbjct: 76  QQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLP 135

Query: 165 EKALKMFYSIVEFNCNPTSKHLNHVLSILVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNI 224
           EK L  FY ++EFN  P  KHLN +L +LV+ R +L+ AF+LF+ +  + V PN +SYN+
Sbjct: 136 EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNL 195

Query: 225 LMRAFCGNDELSVAYKLFNDMLKREILPDVESYRILMQALCRKSQVTKAMDLLDDMFNKG 284
           LM+AFC ND+LS+AY+LF  ML+R+++PDV+SY+IL+Q  CRK QV  AM+LLDDM NKG
Sbjct: 196 LMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG 255

Query: 285 FVPDTLSYTSLLNSLCRKKKLREAYKLLCRMKVKGCNPNLIHYNTVMLGVCREGRAHQAI 344
           FVPD     +L+  LC +    E  K L  M  KG +P+    N ++ G C  G+  +A 
Sbjct: 256 FVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEAC 315

Query: 345 KILDDMYLNGCLPNLVSYRTLVGGLVDQGMYDEARKYMEEMISK 383
            +++ +  NG   +  ++  ++  + ++   ++ + ++E+ + +
Sbjct: 316 DVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKE 355

BLAST of Spo25844.1 vs. TAIR (Arabidopsis)
Match: AT5G46100.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 208.8 bits (530), Expect = 7.700e-54
Identity = 114/372 (30.65%), Postives = 200/372 (53.76%), Query Frame = 1

		  

Query: 73  SPNRIHKLISSQSDPLLAKEIFDLASRQ--PNFRHSYPTFHTLIIKLGNARQFSLMEKLL 132
           +P+++ KL+ ++ D   +  +FD A+ +    + H   +F  ++++L +A +F   E L+
Sbjct: 15  TPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLI 74

Query: 133 SQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHLNHVLSILVAQ 192
            ++K      +  +   +   YG  H P  +L++F+ + +F+C+P+ K    VL+ILV +
Sbjct: 75  VRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEE 134

Query: 193 RSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGND-ELSVAYKLFNDMLKREILPDVE 252
              L  AF  ++   +  + P V S N+L++A C ND  +    K+F +M KR   PD  
Sbjct: 135 NQ-LNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSY 194

Query: 253 SYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLREAYKLLCRM 312
           +Y  L+  LCR  ++ +A  L  +M  K   P  ++YTSL+N LC  K + EA + L  M
Sbjct: 195 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM 254

Query: 313 KVKGCNPNLIHYNTVMLGVCREGRAHQAIKILDDMYLNGCLPNLVSYRTLVGGLVDQGMY 372
           K KG  PN+  Y+++M G+C++GR+ QA+++ + M   GC PN+V+Y TL+ GL  +   
Sbjct: 255 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 314

Query: 373 DEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEVPYIGTW--- 432
            EA + ++ M  +G  P   +   +I G C + +  EA+  L E++  G  P   TW   
Sbjct: 315 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIH 374

Query: 433 ----QEVIPRIC 435
                EV+  +C
Sbjct: 375 VKTSNEVVRGLC 385

BLAST of Spo25844.1 vs. TAIR (Arabidopsis)
Match: AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 193.4 bits (490), Expect = 3.300e-49
Identity = 112/383 (29.24%), Postives = 207/383 (54.05%), Query Frame = 1

		  

Query: 56  NPESQNDLQSFSRTLIASPNRIHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLII 115
           NP + +    FS ++  SPN   +++ +  +  +++++F  A +  +F+    T  ++I 
Sbjct: 26  NPVNFSIHLRFSSSVSVSPNPSMEVVENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIE 85

Query: 116 KLGNARQFSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIV-EFNCN 175
              N+  F  +EKLLS+++          F  +   YG AH+P+KA+ +F+ +V EF C 
Sbjct: 86  SYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCK 145

Query: 176 PTSKHLNHVLSILVAQRSFLRPAFDLFRIAHKYA---VDPNVKSYNILMRAFCGNDELSV 235
            + K  N VL++++ +  + R       + +      + PN  S+N++++A C    +  
Sbjct: 146 RSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDR 205

Query: 236 AYKLFNDMLKREILPDVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLN 295
           A ++F  M +R+ LPD  +Y  LM  LC++ ++ +A+ LLD+M ++G  P  + Y  L++
Sbjct: 206 AIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLID 265

Query: 296 SLCRKKKLREAYKLLCRMKVKGCNPNLIHYNTVMLGVCREGRAHQAIKILDDMYLNGCLP 355
            LC+K  L    KL+  M +KGC PN + YNT++ G+C +G+  +A+ +L+ M  + C+P
Sbjct: 266 GLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIP 325

Query: 356 NLVSYRTLVGGLVDQGMYDEARKYMEEMISKGCSPHFSITHSLIKGLCTVGRTEEASEVL 415
           N V+Y TL+ GLV Q    +A + +  M  +G   +  I   LI GL   G+ EEA  + 
Sbjct: 326 NDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLW 385

Query: 416 GELLKHGEVPYIGTWQEVIPRIC 435
            ++ + G  P I  +  ++  +C
Sbjct: 386 RKMAEKGCKPNIVVYSVLVDGLC 408

BLAST of Spo25844.1 vs. TAIR (Arabidopsis)
Match: AT1G07740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 186.0 bits (471), Expect = 5.300e-47
Identity = 108/341 (31.67%), Postives = 174/341 (51.03%), Query Frame = 1

		  

Query: 86  DPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNARQFSLMEKLLSQLKRLRYPTTPGLF 145
           DP  A  +F    ++  FRH YP++ +LI KL  +R F  ++++L  ++         LF
Sbjct: 61  DPEEALSLFH-QYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLF 120

Query: 146 SRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHLNHVLSILVAQRSFLRPAFDLFRIAH 205
             LI  YG A   +KA+ +F+ I  F+C  T + LN ++++LV     L  A   F  A 
Sbjct: 121 MGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLV-DNGELEKAKSFFDGAK 180

Query: 206 KYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDMLKREILPDVESYRILMQALCRKSQVT 265
              + PN  S+NIL++ F    +   A K+F++ML+ E+ P V +Y  L+  LCR   + 
Sbjct: 181 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 240

Query: 266 KAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLREAYKLLCRMKVKGCNPNLIHYNTVM 325
           KA  LL+DM  K   P+ +++  L+  LC K +  EA KL+  M+ +GC P L++Y  +M
Sbjct: 241 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILM 300

Query: 326 LGVCREGRAHQAIKILDDMYLNGCLPNLVSYRTLVGGLVDQGMYDEARKYMEEMISKGCS 385
             + + GR  +A  +L +M      P++V Y  LV  L  +    EA + + EM  KGC 
Sbjct: 301 SDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCK 360

Query: 386 PHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEVPYIGTW 427
           P+ +    +I G C +   +    VL  +L     P   T+
Sbjct: 361 PNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATF 399

BLAST of Spo25844.1 vs. TAIR (Arabidopsis)
Match: AT3G48810.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 179.1 bits (453), Expect = 6.500e-45
Identity = 114/406 (28.08%), Postives = 200/406 (49.26%), Query Frame = 1

		  

Query: 70  LIASPNR-------IHKLISSQSDPLLAKEIFDLASRQPNFRHSYPTFHTLIIKLGNARQ 129
           L  SPN        + K +  +S   LA   F   +    F+H+  TF  +I KL    Q
Sbjct: 32  LTESPNHAEIKELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQ 91

Query: 130 FSLMEKLLSQLKRLRYPTTPGLFSRLICIYGDAHMPEKALKMFYSIVEFNCNPTSKHLNH 189
              ++ LL Q+K   +  +  LF  +I +Y    + E+A++MFY I EF C+P+ K  NH
Sbjct: 92  VDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNH 151

Query: 190 VLSILVAQRSFLRPAFDLFRIAHKYAVDPNVKSYNILMRAFCGNDELSVAYKLFNDMLKR 249
           VL  L+ +   ++  + ++R   +   +PNV +YN+L++A C N+++  A KL  +M  +
Sbjct: 152 VLDTLLGENR-IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 211

Query: 250 EILPDVESYRILMQALCRKSQVTKAMDLLDDMFNKGFVPDTLSYTSLLNSLCRKKKLREA 309
              PD  SY  ++ ++C    V +  +L +      F P    Y +L+N LC++   + A
Sbjct: 212 GCCPDAVSYTTVISSMCEVGLVKEGRELAE-----RFEPVVSVYNALINGLCKEHDYKGA 271

Query: 310 YKLLCRMKVKGCNPNLIHYNTVMLGVCREGRAHQAIKILDDMYLNGCLPNLVSYRTLVGG 369
           ++L+  M  KG +PN+I Y+T++  +C  G+   A   L  M   GC PN+ +  +LV G
Sbjct: 272 FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG 331

Query: 370 LVDQGMYDEARKYMEEMI-SKGCSPHFSITHSLIKGLCTVGRTEEASEVLGELLKHGEVP 429
              +G   +A     +MI   G  P+    ++L++G C+ G   +A  V   + + G  P
Sbjct: 332 CFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSP 391

Query: 430 YIGTWQEVIPRICEVEEMEGLDGFLDEVIKVDIKP----YTRIIEA 464
            I T+  +I    +   ++G     ++++     P    YT ++EA
Sbjct: 392 NIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431

The following BLAST results are available for this feature:
BLAST of Spo25844.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902156416|gb|KNA06011.1|4.1e-28399.7hypothetical protein SOVF_1850... [more]
gi|731311092|ref|XP_010689086.1|9.0e-22280.8PREDICTED: pentatricopeptide r... [more]
gi|720046138|ref|XP_010270410.1|3.5e-16563.3PREDICTED: pentatricopeptide r... [more]
gi|698461242|ref|XP_009781730.1|3.6e-16264.0PREDICTED: pentatricopeptide r... [more]
gi|590720792|ref|XP_007051427.1|1.8e-16160.6Pentatricopeptide repeat-conta... [more]
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BLAST of Spo25844.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QHB9_SPIOL2.9e-28399.7Uncharacterized protein OS=Spi... [more]
A0A0J8D354_BETVU6.3e-22280.8Uncharacterized protein OS=Bet... [more]
A0A061DS01_THECC1.2e-16160.6Pentatricopeptide repeat-conta... [more]
M5XNI8_PRUPE1.1e-16063.9Uncharacterized protein OS=Pru... [more]
A0A166EQQ7_DAUCA3.1e-16065.0Uncharacterized protein OS=Dau... [more]
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BLAST of Spo25844.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PP298_ARATH8.6e-14054.5Pentatricopeptide repeat-conta... [more]
PP418_ARATH1.4e-5230.6Pentatricopeptide repeat-conta... [more]
PP327_ARATH5.9e-4829.2Pentatricopeptide repeat-conta... [more]
PPR20_ARATH9.4e-4631.6Pentatricopeptide repeat-conta... [more]
PP270_ARATH1.2e-4328.0Pentatricopeptide repeat-conta... [more]
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BLAST of Spo25844.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G01400.17.9e-7541.5FUNCTIONS IN: molecular_functi... [more]
AT5G46100.17.7e-5430.6Pentatricopeptide repeat (PPR)... [more]
AT4G20090.13.3e-4929.2Pentatricopeptide repeat (PPR)... [more]
AT1G07740.15.3e-4731.6Tetratricopeptide repeat (TPR)... [more]
AT3G48810.16.5e-4528.0Pentatricopeptide repeat (PPR)... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 354..384
score: 1.1E-5coord: 145..173
score: 0.25coord: 393..418
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 211..260
score: 2.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 270..329
score: 3.9
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 145..176
score: 0.0021coord: 393..421
score: 8.3E-4coord: 285..317
score: 1.5E-8coord: 321..352
score: 5.2E-6coord: 250..283
score: 1.0E-7coord: 354..386
score: 6.7E-8coord: 215..248
score: 8.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 106..140
score: 5.952coord: 247..281
score: 11.86coord: 352..386
score: 12.167coord: 422..456
score: 5.086coord: 282..316
score: 12.518coord: 317..351
score: 10.874coord: 141..175
score: 7.837coord: 212..246
score: 11.29coord: 387..421
score: 9
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 111..329
score: 5.4E-7coord: 363..411
score: 5.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 331..380
score: 3.49E-6coord: 139..302
score: 3.4
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 19..478
score: 9.3E
NoneNo IPR availablePANTHERPTHR24015:SF501SUBFAMILY NOT NAMEDcoord: 19..478
score: 9.3E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0048102 autophagic cell death
biological_process GO:0016197 endosomal transport
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0007020 microtubule nucleation
biological_process GO:0009414 response to water deprivation
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:0010150 leaf senescence
biological_process GO:0042742 defense response to bacterium
biological_process GO:0044265 cellular macromolecule catabolic process
biological_process GO:0006914 autophagy
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0009870 defense response signaling pathway, resistance gene-dependent
biological_process GO:0009657 plastid organization
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048767 root hair elongation
cellular_component GO:0009295 nucleoid
cellular_component GO:0009507 chloroplast
cellular_component GO:0016020 membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0034045 phagophore assembly site membrane
cellular_component GO:0005829 cytosol
cellular_component GO:0044425 membrane part
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005774 vacuolar membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005484 SNAP receptor activity
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0046872 metal ion binding
RNA-Seq Expression