Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAGTTCGAGCGGCAATTCGACGACGAGCAGTCAACTTCAGAACTCAGGATCTGAAGGAGACTTACAGGTAATGATGGTGGATGATAGGAAAAGGAAAAGAATGGCATCAAACAGAGAATCAGCAAGAAGATCAAGGATGAGAAAACAGAAACACATTGAAGATCTGATGGCTCAAGCTGATCAATTGAAGAGAGAGAATAATCAGATCCTTCAAACTACAAACGTGACTACTCAACAATTTGTCAATGTCGAAGCTGAAAACTCTATTTTGAAAGCTCAAATGAACGAGCTTAGCCAAAGGCTTCAATCCCTCAATGATATCCTCAATTACATAAATACCCTCAATGCTGGGGTTAACAGTGTTGTCGGGGCCACCAACAGTTTTGAGTTGGAGGATGATTCTTTGGACATTATGGGTGATTTTGGATTTATGAATGGGTATTATGGGAATTTTACTCATAACAATAACCATAATAATCCTTGGAACTTGGTTTATCTCAACCAACCTATCATGGCTTCGGCTGATGTCCTCCAATACTAA ATGGCGAGTTCGAGCGGCAATTCGACGACGAGCAGTCAACTTCAGAACTCAGGATCTGAAGGAGACTTACAGGTAATGATGGTGGATGATAGGAAAAGGAAAAGAATGGCATCAAACAGAGAATCAGCAAGAAGATCAAGGATGAGAAAACAGAAACACATTGAAGATCTGATGGCTCAAGCTGATCAATTGAAGAGAGAGAATAATCAGATCCTTCAAACTACAAACGTGACTACTCAACAATTTGTCAATGTCGAAGCTGAAAACTCTATTTTGAAAGCTCAAATGAACGAGCTTAGCCAAAGGCTTCAATCCCTCAATGATATCCTCAATTACATAAATACCCTCAATGCTGGGGTTAACAGTGTTGTCGGGGCCACCAACAGTTTTGAGTTGGAGGATGATTCTTTGGACATTATGGGTGATTTTGGATTTATGAATGGGTATTATGGGAATTTTACTCATAACAATAACCATAATAATCCTTGGAACTTGGTTTATCTCAACCAACCTATCATGGCTTCGGCTGATGTCCTCCAATACTAA ATGGCGAGTTCGAGCGGCAATTCGACGACGAGCAGTCAACTTCAGAACTCAGGATCTGAAGGAGACTTACAGGTAATGATGGTGGATGATAGGAAAAGGAAAAGAATGGCATCAAACAGAGAATCAGCAAGAAGATCAAGGATGAGAAAACAGAAACACATTGAAGATCTGATGGCTCAAGCTGATCAATTGAAGAGAGAGAATAATCAGATCCTTCAAACTACAAACGTGACTACTCAACAATTTGTCAATGTCGAAGCTGAAAACTCTATTTTGAAAGCTCAAATGAACGAGCTTAGCCAAAGGCTTCAATCCCTCAATGATATCCTCAATTACATAAATACCCTCAATGCTGGGGTTAACAGTGTTGTCGGGGCCACCAACAGTTTTGAGTTGGAGGATGATTCTTTGGACATTATGGGTGATTTTGGATTTATGAATGGGTATTATGGGAATTTTACTCATAACAATAACCATAATAATCCTTGGAACTTGGTTTATCTCAACCAACCTATCATGGCTTCGGCTGATGTCCTCCAATACTAA MASSSGNSTTSSQLQNSGSEGDLQVMMVDDRKRKRMASNRESARRSRMRKQKHIEDLMAQADQLKRENNQILQTTNVTTQQFVNVEAENSILKAQMNELSQRLQSLNDILNYINTLNAGVNSVVGATNSFELEDDSLDIMGDFGFMNGYYGNFTHNNNHNNPWNLVYLNQPIMASADVLQY Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo25828.1 vs. NCBI nr
Match: gi|902217947|gb|KNA17918.1| (hypothetical protein SOVF_075240 [Spinacia oleracea]) HSP 1 Score: 338.6 bits (867), Expect = 6.800e-90 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1
BLAST of Spo25828.1 vs. NCBI nr
Match: gi|731312174|ref|XP_010672920.1| (PREDICTED: ocs element-binding factor 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 248.1 bits (632), Expect = 1.200e-62 Identity = 147/196 (75.00%), Postives = 166/196 (84.69%), Query Frame = 1
BLAST of Spo25828.1 vs. NCBI nr
Match: gi|870869971|gb|KMT20716.1| (hypothetical protein BVRB_1g006910 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 218.4 bits (555), Expect = 1.000e-53 Identity = 125/164 (76.22%), Postives = 142/164 (86.59%), Query Frame = 1
BLAST of Spo25828.1 vs. NCBI nr
Match: gi|661889033|emb|CDP07476.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 180.6 bits (457), Expect = 2.400e-42 Identity = 111/183 (60.66%), Postives = 133/183 (72.68%), Query Frame = 1
BLAST of Spo25828.1 vs. NCBI nr
Match: gi|697129596|ref|XP_009618859.1| (PREDICTED: ocs element-binding factor 1-like [Nicotiana tomentosiformis]) HSP 1 Score: 178.7 bits (452), Expect = 9.000e-42 Identity = 107/179 (59.78%), Postives = 129/179 (72.07%), Query Frame = 1
BLAST of Spo25828.1 vs. UniProtKB/TrEMBL
Match: A0A0K9REL1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_075240 PE=4 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 4.800e-90 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1
BLAST of Spo25828.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FYL2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g006910 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 7.200e-54 Identity = 125/164 (76.22%), Postives = 142/164 (86.59%), Query Frame = 1
BLAST of Spo25828.1 vs. UniProtKB/TrEMBL
Match: A0A068UG63_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00024749001 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.700e-42 Identity = 111/183 (60.66%), Postives = 133/183 (72.68%), Query Frame = 1
BLAST of Spo25828.1 vs. UniProtKB/TrEMBL
Match: B9R7Z2_RICCO (Ocs element-binding factor, putative OS=Ricinus communis GN=RCOM_1595650 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 7.000e-41 Identity = 108/181 (59.67%), Postives = 131/181 (72.38%), Query Frame = 1
BLAST of Spo25828.1 vs. UniProtKB/TrEMBL
Match: M5XZQ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012507mg PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 2.600e-40 Identity = 108/182 (59.34%), Postives = 136/182 (74.73%), Query Frame = 1
BLAST of Spo25828.1 vs. ExPASy Swiss-Prot
Match: BZIP2_ARATH (bZIP transcription factor 2 OS=Arabidopsis thaliana GN=BZIP2 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 8.200e-27 Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 1
BLAST of Spo25828.1 vs. ExPASy Swiss-Prot
Match: BZP44_ARATH (bZIP transcription factor 44 OS=Arabidopsis thaliana GN=BZIP44 PE=1 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.400e-26 Identity = 84/178 (47.19%), Postives = 113/178 (63.48%), Query Frame = 1
BLAST of Spo25828.1 vs. ExPASy Swiss-Prot
Match: BZP11_ARATH (bZIP transcription factor 11 OS=Arabidopsis thaliana GN=BZIP11 PE=1 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 9.100e-26 Identity = 80/184 (43.48%), Postives = 117/184 (63.59%), Query Frame = 1
BLAST of Spo25828.1 vs. ExPASy Swiss-Prot
Match: BZP53_ARATH (bZIP transcription factor 53 OS=Arabidopsis thaliana GN=BZIP53 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.100e-14 Identity = 62/170 (36.47%), Postives = 94/170 (55.29%), Query Frame = 1
BLAST of Spo25828.1 vs. ExPASy Swiss-Prot
Match: OCS1_MAIZE (Ocs element-binding factor 1 OS=Zea mays GN=OBF1 PE=2 SV=2) HSP 1 Score: 63.9 bits (154), Expect = 2.000e-9 Identity = 44/111 (39.64%), Postives = 70/111 (63.06%), Query Frame = 1
BLAST of Spo25828.1 vs. TAIR (Arabidopsis)
Match: AT2G18160.1 (basic leucine-zipper 2) HSP 1 Score: 121.7 bits (304), Expect = 4.600e-28 Identity = 83/181 (45.86%), Postives = 113/181 (62.43%), Query Frame = 1
BLAST of Spo25828.1 vs. TAIR (Arabidopsis)
Match: AT1G75390.1 (basic leucine-zipper 44) HSP 1 Score: 120.2 bits (300), Expect = 1.300e-27 Identity = 84/178 (47.19%), Postives = 113/178 (63.48%), Query Frame = 1
BLAST of Spo25828.1 vs. TAIR (Arabidopsis)
Match: AT4G34590.1 (G-box binding factor 6) HSP 1 Score: 118.2 bits (295), Expect = 5.100e-27 Identity = 80/184 (43.48%), Postives = 117/184 (63.59%), Query Frame = 1
BLAST of Spo25828.1 vs. TAIR (Arabidopsis)
Match: AT3G62420.1 (basic region/leucine zipper motif 53) HSP 1 Score: 80.5 bits (197), Expect = 1.200e-15 Identity = 62/170 (36.47%), Postives = 94/170 (55.29%), Query Frame = 1
BLAST of Spo25828.1 vs. TAIR (Arabidopsis)
Match: AT5G15830.1 (basic leucine-zipper 3) HSP 1 Score: 65.1 bits (157), Expect = 5.100e-11 Identity = 50/139 (35.97%), Postives = 77/139 (55.40%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo25828.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo25828.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo25828.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo25828.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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