Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTAACATCGATTTTATTAGACAAACAGTAAAACATAAGAAGTCAAACAAAAAAATCAATGTAAATAACAAGTCAACCGAACAAGTAAATCGGCCAATAACCAATCCTCCGCCCCATGTCCGGTCCCCCACCAGAATACCCCCACCAAATTACCACTGGCAATCAAAATCAAAATACCTTTCCAAAATTATCACTGATAACGGTGAGAAGTGAGAACTTCTTCCAAATCTTGAAAAACCCCAGAAATTCCACTCATCAATGGCGTCCAGTATCCCAGCAAGCAACGCCCTTACCTTCTCTTTCCTCCATAAACGAACCCAATTCCTCACGCCCTCAATAACCCACTACAAACTTCACACCCCTAACCCACTCCCTCCTCTAACCCTCCAAAAGGGCACTCCCCATTTCTCCCTTAACCCTCTTTTTCTCTCTCCTCCCTCCACCCTAAGGGCACCCGCAACAAAGAATTCAGAAAATACACTAATAAACAACGAATTAAATGTCACAAATATTGGGGAAAAACCCTTAAAAACAGTTTTGTGGGTGTTGTTTTGGACATCCGTTTCTCTTGCTGTTTTCGCCTTCTCTAAAGATGCCAAGGCAGCTGTTGTTTCCGTTGTTGCCAGTGATTCTTCCATTAAAGCTTCGAGCTTTGGTGTTAAAGTTGCGAGCTTTATGAGGGGTTCTGGTTGGGCTGATGAAGTGATTGTTTTTGCTCTTGCTACTCTTCCTGTGATTGAGCTTCGTGGGGCTATTCCTGTTGGTTATTGGATGCAACTTAAACCTACTTCGCTCACTGTCTTATCCATTTTGGGGTGAGTTATTGTTGATTTGTGTGCTTAATTTTATGTTAATTGTGTGATTGTTGTTTTTAATTTGTAATGTTTTCGCTTAATTGGTGAATTATCTTTCAATTTATGAGTAGTAGTATCATTTTGGCTAGTTGTGTGCATTGTGATTTCTGTGATGCAATTGCTGAGTTTTAGTGTAAGGTTGTCCAATTCTTTGATGCAATTGCTGTGTTTTAGTGTAAGGTTGTCCACTTCTTTGATGCAATTGCTGAGTTTCATGGTTCTCCAGTACCTGAAATAGTGTCCATAGGTTTGAGTGTGGAATTGAGAGAATTGCTTAGTTTGGGTACTACCTGTGGCTGCAAGTTAACTAAGATTGGCTAGGAGTTTGGAAGAGGTATTCCGAGACTCGGAATTGAATTCTTGTTTGCATCGTTTCCCTTTCGGGACTCGGTATGTAGTGATACGCACATTCCCACAACAGCAAGTCAGCAACAAGAACAGAAGACTTGGTTTAGATTGAGAAATTGTTTAGTTAGGGCAATGCAGAAGTTCAAGAATAGAAAAATAATTGTGTAAATTTTGGTGATTGAACCATTTTTTAGGATGACAATGGTGTGGGATTGGTAATACTTTTGTGTTTAGATAGAGGCACATCAGAGAACTTTTATCAATAGCTACCATATTCGACTGAGTTATTCATGACCTGATCTATCATGTGGTAATTTTAATTATATTAATGAGGACATCCAGGTAATACCTATATGTTTTTAGAGGTTGATCTTGCTACATTTTGAGTGAGCTTCTTATTTGTGATGTAGAAACATGCATCTTTTGCTGTCCACTATAATTAGCACATGAAAGTTTGTAATTGGAAGGAATTAAATTCAAGCCATCAATGTGGTTCATGCAAGTGTTCTGAAATGTATTGGGGAAAATTTGGCTAGTTGATAGTTGACTGATCTTATTTATGTCGTAATTGTAGGAACATGGTCCCGGTTCCTTTCATTCTACTTTACTTGAAGAAGTTTGCGAATTTTCTTGCTGGGAAGAACCGCACAGCATCAAGATTTCTGGACATGTTATTCGAGAGAGCCAAGGAGAAGGCTGGCCCGGTGGAAGAGTTCCAATGGCTGGGTTTGATGTTATTTGTTGCAGTGCCTTTTCCTGGTACTGGAGCGTGGACTGGTGCTATCATTGCTTCAGTGCTGGACATGCCATTCTGGCCTGCTATAACAGCAAATTTCTTCGGTGTGGTTGGTGCTGGACTTCTTGTCAATTTGCTAGTGAACCTTGGTCTCAAGTATGCTATTATAACCGGTGTTATCCTATTTATTGTTTCAACATTTATGTGGAATGTGCTTCGGAGTCTTAAAAAGTCTCTGAACTAAGTAACCTAACTGTTTTCAAATTCTATCATCTATGCCCACTCATCTTTCTTGTATGGCATCTTTGCTGACCTTTCCTTCAACCCTACAAAAGTACAGACAGTAGCAGATCAATTCTTTCTCGGTTTCATCCTACCTTGTGAATGTTTTCTGAAATTATGAGATGATGAGAAACAAATTGGTCTTGTTTTTGCCATTCAACAACTATCTTCAAAGTTGTTGTCCTTATAACAGATAGAGCTTCAAACTACTTTTGCAAAACGATCCTGGATCTTGTTCAAGAACTGTGTTTCTGATCAGTCGAGTAAATGTATGTTCTGAGTTTTTCGAACAATGTATAGGTGATAATCAGTAAATAGTTATGTATGTCACCTGATGTTGTTTTTCTTCTGTGAGAGGCACAAACCATACAATGTGTGATTTTCTCTTTGTGAGATAGATACAGCGTATTGGACCTTGTTATGTTGTAGTTTCGTGCCTATCGCCTTTTGCAGATACAGACTAATGGTTGTCAAATCTATGGGGTTTGAGCTGGGTTCCCCATAA TTAACATCGATTTTATTAGACAAACAGTAAAACATAAGAAGTCAAACAAAAAAATCAATGTAAATAACAAGTCAACCGAACAAGTAAATCGGCCAATAACCAATCCTCCGCCCCATGTCCGGTCCCCCACCAGAATACCCCCACCAAATTACCACTGGCAATCAAAATCAAAATACCTTTCCAAAATTATCACTGATAACGGTGAGAAGTGAGAACTTCTTCCAAATCTTGAAAAACCCCAGAAATTCCACTCATCAATGGCGTCCAGTATCCCAGCAAGCAACGCCCTTACCTTCTCTTTCCTCCATAAACGAACCCAATTCCTCACGCCCTCAATAACCCACTACAAACTTCACACCCCTAACCCACTCCCTCCTCTAACCCTCCAAAAGGGCACTCCCCATTTCTCCCTTAACCCTCTTTTTCTCTCTCCTCCCTCCACCCTAAGGGCACCCGCAACAAAGAATTCAGAAAATACACTAATAAACAACGAATTAAATGTCACAAATATTGGGGAAAAACCCTTAAAAACAGTTTTGTGGGTGTTGTTTTGGACATCCGTTTCTCTTGCTGTTTTCGCCTTCTCTAAAGATGCCAAGGCAGCTGTTGTTTCCGTTGTTGCCAGTGATTCTTCCATTAAAGCTTCGAGCTTTGGTGTTAAAGTTGCGAGCTTTATGAGGGGTTCTGGTTGGGCTGATGAAGTGATTGTTTTTGCTCTTGCTACTCTTCCTGTGATTGAGCTTCGTGGGGCTATTCCTGTTGGTTATTGGATGCAACTTAAACCTACTTCGCTCACTGTCTTATCCATTTTGGGGAACATGGTCCCGGTTCCTTTCATTCTACTTTACTTGAAGAAGTTTGCGAATTTTCTTGCTGGGAAGAACCGCACAGCATCAAGATTTCTGGACATGTTATTCGAGAGAGCCAAGGAGAAGGCTGGCCCGGTGGAAGAGTTCCAATGGCTGGGTTTGATGTTATTTGTTGCAGTGCCTTTTCCTGGTACTGGAGCGTGGACTGGTGCTATCATTGCTTCAGTGCTGGACATGCCATTCTGGCCTGCTATAACAGCAAATTTCTTCGGTGTGGTTGGTGCTGGACTTCTTGTCAATTTGCTAGTGAACCTTGGTCTCAAATACAGACTAATGGTTGTCAAATCTATGGGGTTTGAGCTGGGTTCCCCATAA ATGGCGTCCAGTATCCCAGCAAGCAACGCCCTTACCTTCTCTTTCCTCCATAAACGAACCCAATTCCTCACGCCCTCAATAACCCACTACAAACTTCACACCCCTAACCCACTCCCTCCTCTAACCCTCCAAAAGGGCACTCCCCATTTCTCCCTTAACCCTCTTTTTCTCTCTCCTCCCTCCACCCTAAGGGCACCCGCAACAAAGAATTCAGAAAATACACTAATAAACAACGAATTAAATGTCACAAATATTGGGGAAAAACCCTTAAAAACAGTTTTGTGGGTGTTGTTTTGGACATCCGTTTCTCTTGCTGTTTTCGCCTTCTCTAAAGATGCCAAGGCAGCTGTTGTTTCCGTTGTTGCCAGTGATTCTTCCATTAAAGCTTCGAGCTTTGGTGTTAAAGTTGCGAGCTTTATGAGGGGTTCTGGTTGGGCTGATGAAGTGATTGTTTTTGCTCTTGCTACTCTTCCTGTGATTGAGCTTCGTGGGGCTATTCCTGTTGGTTATTGGATGCAACTTAAACCTACTTCGCTCACTGTCTTATCCATTTTGGGGAACATGGTCCCGGTTCCTTTCATTCTACTTTACTTGAAGAAGTTTGCGAATTTTCTTGCTGGGAAGAACCGCACAGCATCAAGATTTCTGGACATGTTATTCGAGAGAGCCAAGGAGAAGGCTGGCCCGGTGGAAGAGTTCCAATGGCTGGGTTTGATGTTATTTGTTGCAGTGCCTTTTCCTGGTACTGGAGCGTGGACTGGTGCTATCATTGCTTCAGTGCTGGACATGCCATTCTGGCCTGCTATAACAGCAAATTTCTTCGGTGTGGTTGGTGCTGGACTTCTTGTCAATTTGCTAGTGAACCTTGGTCTCAAATACAGACTAATGGTTGTCAAATCTATGGGGTTTGAGCTGGGTTCCCCATAA MASSIPASNALTFSFLHKRTQFLTPSITHYKLHTPNPLPPLTLQKGTPHFSLNPLFLSPPSTLRAPATKNSENTLINNELNVTNIGEKPLKTVLWVLFWTSVSLAVFAFSKDAKAAVVSVVASDSSIKASSFGVKVASFMRGSGWADEVIVFALATLPVIELRGAIPVGYWMQLKPTSLTVLSILGNMVPVPFILLYLKKFANFLAGKNRTASRFLDMLFERAKEKAGPVEEFQWLGLMLFVAVPFPGTGAWTGAIIASVLDMPFWPAITANFFGVVGAGLLVNLLVNLGLKYRLMVVKSMGFELGSP Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo25783.1 vs. NCBI nr
Match: gi|902036362|gb|KNA02646.1| (hypothetical protein SOVF_216710 [Spinacia oleracea]) HSP 1 Score: 567.8 bits (1462), Expect = 1.200e-158 Identity = 293/296 (98.99%), Postives = 295/296 (99.66%), Query Frame = 1
BLAST of Spo25783.1 vs. NCBI nr
Match: gi|731344177|ref|XP_010683272.1| (PREDICTED: uncharacterized protein LOC104897985 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 429.1 bits (1102), Expect = 6.500e-117 Identity = 232/301 (77.08%), Postives = 254/301 (84.39%), Query Frame = 1
BLAST of Spo25783.1 vs. NCBI nr
Match: gi|1000964189|ref|XP_015575266.1| (PREDICTED: uncharacterized protein LOC8287027 isoform X1 [Ricinus communis]) HSP 1 Score: 331.3 bits (848), Expect = 1.900e-87 Identity = 183/281 (65.12%), Postives = 217/281 (77.22%), Query Frame = 1
BLAST of Spo25783.1 vs. NCBI nr
Match: gi|747049960|ref|XP_011071035.1| (PREDICTED: uncharacterized protein LOC105156565 [Sesamum indicum]) HSP 1 Score: 328.6 bits (841), Expect = 1.200e-86 Identity = 182/287 (63.41%), Postives = 214/287 (74.56%), Query Frame = 1
BLAST of Spo25783.1 vs. NCBI nr
Match: gi|596224101|ref|XP_007224123.1| (hypothetical protein PRUPE_ppa015818mg [Prunus persica]) HSP 1 Score: 325.5 bits (833), Expect = 1.000e-85 Identity = 181/275 (65.82%), Postives = 211/275 (76.73%), Query Frame = 1
BLAST of Spo25783.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q808_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_216710 PE=4 SV=1) HSP 1 Score: 567.8 bits (1462), Expect = 8.200e-159 Identity = 293/296 (98.99%), Postives = 295/296 (99.66%), Query Frame = 1
BLAST of Spo25783.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C527_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g154710 PE=4 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 4.600e-117 Identity = 232/301 (77.08%), Postives = 254/301 (84.39%), Query Frame = 1
BLAST of Spo25783.1 vs. UniProtKB/TrEMBL
Match: M5XGS5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015818mg PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 7.100e-86 Identity = 181/275 (65.82%), Postives = 211/275 (76.73%), Query Frame = 1
BLAST of Spo25783.1 vs. UniProtKB/TrEMBL
Match: D7TNF2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01540 PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 7.100e-86 Identity = 182/301 (60.47%), Postives = 220/301 (73.09%), Query Frame = 1
BLAST of Spo25783.1 vs. UniProtKB/TrEMBL
Match: A0A068TWG1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032168001 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 1.300e-84 Identity = 183/293 (62.46%), Postives = 211/293 (72.01%), Query Frame = 1
BLAST of Spo25783.1 vs. TAIR (Arabidopsis)
Match: AT2G02590.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 291.2 bits (744), Expect = 7.500e-79 Identity = 158/239 (66.11%), Postives = 187/239 (78.24%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo25783.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo25783.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo25783.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo25783.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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