Spo25758 (gene)

Overview
NameSpo25758
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 39271295 .. 39275176 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTGAAGTCATTTGATGTATAAGAAGGTGACCTCCTTACTATTTTTTCCTTTTGATTGTTTAATGACGAGGCCAACTGCATTTCTTGCTATATCTATTATGGAGTACTATATCTATTACTATTGATTATAATCTCATTTGCAATTTACGATTTGGTGGTTAACGAAGAGTTAAATTGAAATTTGCAACTCTTGTTGTATATTTTACCGATGATGATAAACAGATTTACAATCTGCCAAAGAAAAGAAAAACAAGTCTGGAAAGATAGAAGTCACATACAAATTTCAGTTGATGATCCAATGAGATCTGACTGGAGTGGTATTTGCAGTTATGACCATGAGTCTCCTTTACCTGATTTATTTTATTTTTCTTAGGCTGTAGGTCTTATGTGCTCGTAGCAAGCTTGGAAGTAAATTACTCCTATTTCTTAGGCATAAAGCGTAGTATGTCTTGAAACCCTGGTAAATGCAGAAGCAAAGTTCGCCAAGATTGGAATACAAACTTCCCCTTTGGGTGGAAAATAAATTTATAATCCCCCATTTTTAGACTTGCATCAGTGTAAAATGATGTCTTTTTTAGAGGCAATATTGCTCCCAATATCTGCTTGTCTTGTTTACTTCATAAAACTAGAGTTCCGTTTTCCCAGTACTTTGATGATAATGGATAAACTAGTGTCCCCTTTTGATATTGTGGGTCATTGCCGTCATTATAACACGTTATGCAGCTAATCTTGTTAACTATAGGATATAGGACAATGGTATGTTTAGGCTGATGAGTCCATTATGTTATTGTGCTGCTGGTTTATTTTCTTTGTTTTATGTTTAGAAATTTGTTCTTTAGTGTTTAATCTAAGTACCTTTGCTTTGATTTATGGAATTCTCCCGTTTGATGTACTTGTTCAGTAGTTGTTCTGTGTAATGAATTAATGATATTTGAAATCACTAACTCAATCTATTGTCTGAAAACAACTGAATTTACATGGTATTTGAAAGACTTAAATATGTTGTATTTACATTTCAGGCTCGTGATTCATTCTTTTACTTTCGCTTGCCCTTTTACAGGGCCAAACAACAACTGTCCAATTTCAACCCTTAGCAAGACAAAATCCGTGGAAGTTCAATGTAAGCACCCTTACTTTTAAGTGTTATATTTATGTGTGATAAACCTTTCTCCATTCGCTCAAGATGGAAGTTCAGGAAGTTTCAGATTGTGTAGCCTTACCCTTTTCTTTTTTATTTGGTTAAAAGGTAAGCTTAGAGTAATTTAAATTGTCTTGTCCATGGACATACAACACATAAGATCATGAGGATCCTTTAGAGAGAGACAAAAGTACTTAGTTAATACAGACCAGGGAAGGGGAAGTCATAAAATTTACAAATAATTAACTAATTAGGGTCGGGGGTGTAAGAAACCTCAAAGGTTAGAGGTGACAATGTGGCCGCCCCAGTTATAGGCTGGCAAAATTAAGCTAGATGTTCGATAGGTAACATTTAGCCATCTAGAATTTGAGTTTACGAAAGGTTTTTCTCATCATCTCATGACTTGATAATTTAGCCTCACCGCTTATACAAATATGAGTATGTAGAAGTAGTTGGCTATATCTAGAATTCGGGTTTTTGAAAGGTTGTTCTCATTATCATATCAGACTTGACAATGTTGTCTCCTTCTTATAATGTGGTAATTTGTAGTATCAAAAAAATCCATAACTCTTATTCGACCCTTGATTATGTTGGTTTAATTAGTTACTCGATCCCTACTTTGGTGCAGAATTATTGTTTGAAGCATTGGATAAAATTGTTGTATTCATGTCTAGTATGTCATGGTTAGCTCTTCCTTTGGTGTGTCCTGTTTCGTAGAAGAAGGAAATTTTCTGTGAACTATAAGAAAGGCTGACTATGCTAGTGGATGGTTGAGTTTATGAGGCCGGAAACTGAGAAAATATCTATGTTAAATGATGCAGGATGGGAAAGGTTAAGCTGGATATAATGAAAGTAGAGAATGCAAGCAGCCGTCAAGCCACTTATTCAAAACGGAAACATTGGAATCTTGAAAAAGGCAAGAGCTATCTATATTGTGTGATATAGACCTAGCCCTTGTCATGTTCTCACCAGGTGGCAAACCTAGTTTATGTTGTGGAAAGCACAGGTATTACAGCTTCTGTCATTTTGATGTATGCATAACTTGATGCAGTTTCACAACCATTACTTACTTTAGGCTGTTGTTAATATTCACAGCTACATTTGTTCATTTCCTCTTGCTTAAATTATTCACCAGTTATGGCGATATCTTGAGTTTTATGTTGGCTTGAAGCCTTGAAGAACCCCTGCATGGAGGTTCTATTTTATCCAGAAAATTTTATTTACTGGGATTACATAATCTTTCAGCACCGTATAAACGTGAAATGTGCAGTTTGATCCTGTGGCAGTCCTGTAGAAACTAAAATTTCTTCAGAACAAAGTCTGTGTTTAGGATTTCGTCAGAATGCATATTTTTTATCCTTCAAAGACCAGATGAGATTCGTATCTGTAATATTTTTTTTTTCCGCCAAAATGTCTGCGCCTCTAGCTGCCCTTCCCTCGAAGGCGTCTTTAATACCTGGTTCTTGTTGAAGATAGTCCCTGCCTCAAGATATTAGATTAGATACTCTGGTGTGAATCTCATCCTGATTTTGAATGAGGTCCATGGCACAATTGCAATCTGTAGTAATAACCCCTCCCTCTAGTTTCAGTCCACTGCCCATTTAATGCCCTCAAAAATTGCAGTAACCTCTGCTTCCAATGCACTGGAGCAGTAGAAACTGAAGGTAATCCAAACACCGTGACTATTCCTACAAACACCAGAAATTCCCGATGCTTTTGACTGATTGATGAATGAGGAACCTTGATCTATTTATTCTCCAAAATCACAAGATTCAATGACCTCTGGCTTTGTTGTTTATAGAATATTTTATTGGTGTACCCCAGACATCAGAATAATAATACCGAGTTCCTGAAATTTGCTGTTAACAAACCCTCCAATTAAAGTGTGTTGTACCACATTGACAATAAACAACCAGGTTACTGTAACTACATGATATAAAAGGCAAGAATTGAGGCTAAACAAATCATACCTTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCTTATCAGTTTAATATCTGATACGTGGGCCAATGGCCCACAACGATATTAAATTTATTTTTTAAGGGGGAAGTCCCATCACAGTAGCTTGCTGCTGGGGTCTTCAAGCGTCGCCTATGCGTTGCACTACTGCACAGGCCTGGCGCACCCCACTAATTCCTAGTTTAAAAGTAAGGGCTATGGATAAAATTATAAATTGGTCTCACTTGTTTGTAAAGATAAAACTATAAATTGGATCTTTGTGTACTGCAGGTTCTAAAAAAATGGAATTTCTCTGCCAAATAAAGCTGATGTTTTCTTTTGCTGGTGTCTTCGGATCATAGGCTTGGCACCCCACTAATTCCTAGTTTAAAATTAAGAATTATGCCTTTTGTTCATTTTAAATTCCGCATAAAGATAAAATTATTACAATTGGCACCACAAAACTATTTGGTATCTTAGCTCCTCAGCTGTATCTGGGTAATGATTAATAGTAATTTCTCCCAAATTCTGCCTGTCATGTTTACTTCCACTGATGTTTTCTTTTGCTAGTCTCATCGGATCATTATTTGTTGTTTGTGTAATGGTGATTTGTTTATGTACACATTATTTTCCTTGCTTGGGTTGGTTCTTGTTTCATGCTTTGAAAACCATTATAACATTGTTTGTGATTTTGGTTCACCATGAACAGGACTTGTAATGGAATCTGCCACAGTTATTCTGATTTCTTTGTCTGTAAACAGGCCAAATGGTGA

mRNA sequence

GCTGAAGTCATTTGATGTATAAGAAGGGCCAAACAACAACTGTCCAATTTCAACCCTTAGCAAGACAAAATCCGTGGAAGTTCAATGATGGGAAAGACCTAGCCCTTGTCATGTTCTCACCAGGTGGCAAACCTAGTTTATGTTGTGGAAAGCACAGGACTTGTAATGGAATCTGCCACAGTTATTCTGATTTCTTTGTCTGTAAACAGGCCAAATGGTGA

Coding sequence (CDS)

ATGTATAAGAAGGGCCAAACAACAACTGTCCAATTTCAACCCTTAGCAAGACAAAATCCGTGGAAGTTCAATGATGGGAAAGACCTAGCCCTTGTCATGTTCTCACCAGGTGGCAAACCTAGTTTATGTTGTGGAAAGCACAGGACTTGTAATGGAATCTGCCACAGTTATTCTGATTTCTTTGTCTGTAAACAGGCCAAATGGTGA

Protein sequence

MYKKGQTTTVQFQPLARQNPWKFNDGKDLALVMFSPGGKPSLCCGKHRTCNGICHSYSDFFVCKQAKW
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo25758.1Spo25758.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo25758.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo25758.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo25758.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo25758.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006164 purine nucleotide biosynthetic process
biological_process GO:0006464 cellular protein modification process
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0007017 microtubule-based process
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006979 response to oxidative stress
biological_process GO:0008152 metabolic process
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0000105 histidine biosynthetic process
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0030091 protein repair
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006560 proline metabolic process
biological_process GO:0050896 response to stimulus
biological_process GO:0006591 ornithine metabolic process
biological_process GO:0009987 cellular process
biological_process GO:0006526 arginine biosynthetic process
biological_process GO:0016311 dephosphorylation
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0048481 plant ovule development
biological_process GO:0019497 hexachlorocyclohexane metabolic process
cellular_component GO:0005875 microtubule associated complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0044425 membrane part
cellular_component GO:0005840 ribosome
cellular_component GO:0009348 ornithine carbamoyltransferase complex
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0004424 imidazoleglycerol-phosphate dehydratase activity
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0016829 lyase activity
molecular_function GO:0004585 ornithine carbamoyltransferase activity
molecular_function GO:0016597 amino acid binding
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0005515 protein binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0003993 acid phosphatase activity
RNA-Seq Expression