Spo25466 (gene)

Overview
NameSpo25466
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionCholine monooxygenase
LocationSpoScf_00825 : 229863 .. 237843 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGACAACTTAAGAAAATAGGCTGAAAATAATGAGCAAGCAAGAACTCAAATTCTCGCTCTCTTAATCTTGATGTCAATTACTCATAGTATTACCCAAAACCCACTTACTAATCATGTCACCTTGCAATCCTTTGGAAACAATTTCATTCCCAAAATAGAAAGATTTCCCAATCGAATTCATCAAGCACCCATTAAACTCACAAAATGTCTCTCGAATTCATCATCAATCCAATCAACCCACAAAATTGCCCATGAATTTGATCCCAATATTCCAATTGAAGAGGCTCAAACTCCACCCTGTTCATGGTATTCTGATCCCGAATTTTATTCCCATGAGATTGATCGTGTTTTCTACAGTGGATGGCGAGTTGTAGGTAATTTCTCCCACAATTTCTATCTTCTTTTTTAATACCCTTTCAATTTCTTCAATAATTGTTGCCGTTAAAAAAAATACAATAGTGATTTAGGATTGATGTTTGTCTTATTGATCATTCATGTGAAGAATAATATTTAGGATTGATTTTTGTCTTAAAATAATAATTTAGGATTGATGTTTGTGTTATTGATCATTCATAGTGAAAAATAATAATTAAGGATTGATGTTTGTCTCAAAATAATAATATTACTGTTGGTAAGAAAAATTTAAATTAAAGGGGAGAGATTACATGTAATGTGATGGTGTTTTATGGGTTTTACATGGGTGATGGGTGTTCTTATGAATTACCCAACTCTAGTTTGTATGTGGTTATATAAGGAGCCACAAGGGTGATGATTTAGATGGGATTCCATCCTAGGTTATAGGTACCACCTCCACAATCACACATTCACACATGACCGTACCAACTACACATGACCGTACCAACTAAGCTAGTTGACATCTACACCCAACTCTAGTTTATAGGTTACAGTTACTCATTTGTATTTTCCTAAAGCATGTTGTGAATTGTTGAACATATCATGACTTTCATGAGGGTGTTTTGGATGATGTCTAGGCCAAAGAGGCAAAGATGATCGATTTTTAGAACAAGGAGATTAATGCATTTGGATATTGATGAATATAATGTAAGAGAATACAAAGATGAGGAAAGTTATGTATATTCTCATTAACTTAAGCAACATTTATACAAGAAAATTACATTAACCTAATTAGGTTTAGCTAACAAACTAAGAGGATAAATAGGAAGATAAAGTAAAGACGGAAGACTAGGTAAAAGATTCCTAACAGTAAGCTACTTGAAGAAACTAAATACAAGTAGAAAATATCTAAACAATAAGCATAAGCTTTGACTTGTTATACTTTTTCTATCATGACCCGTCAAGACGGACGGTGGAAGAGAAAGTCCGATTTTGGCTAGTAGCATCTTTAGACGGCATCTAGGTAGTGGCTTAGTTAAGGCGTCAACCAACTGATCATCATTAGCGACGACTGTGACTCGTAAAATTCCGGCTTGGACTCGTTCTCTAATAAAATGACAGTCCACACCAAGATGCTTCATACGAGATTGAAGTACTGGATTTGCACTTATTTTTGTAGCACCAATATTATCGCAATATATGACAGGCATATTTGGACTTGGTAATTTTAATTCATGCATAAGATGACTGCCCCAATCTAGTACGGCTGCAGTTTGTGCAACACACCTATATTCGGCCTCGGTGGATGATCTTGCTACTTATTTTTGTTTCTTGGAACTCCATGAGATAGGATTTTTACCTAAGTAAACAATATAGCCACCAGTAGAAACACAATCATCTCGATCACCCGCCCAATCGACATCGGAGAAGGCATGAAGATGAAGAGGGGAGGCAGAGTATATGTTAAGGCCGACTGGCCGAGATCAATTGAGCCATGGAGATATCGGAGGAGATGCTTCAAGGCTTGGTAATGCACGGTGGTCGGTTTGTGCATGAATTGAGATAGCTTGTTGACTGCAAAAGCAACATCATTGCGAGTAAGAGATAAATATTGGAGGCCACCAACCAACATTCAATATTCAATTGGATTATCAAGAGTAGTTCCTGCACCCAAAGTCAATTTGACGTTGAGATCAAGAGGAGAGCTAACAGGCTTGCAGTAGACATTTGTGCTCTATCAAGGAGGTCCATTATGTATTTCCTTTGAGATAGTAGGAATAAACCATGGGAGCACGGTTGGACTTCAACACTCAAGAAACAATCAAGGTCACCAAGGTCTTTGAGTGAGAACCTATTTGCAAGCCCAATGATAAAGTCGGATACACTTAAAGAATATGGCCCTGTAATTATTATGTCATCAACATAAACAAGTACAGATACGCTTAAAGAACATGGCCCTGTAATTATTATGTCATCAACATAAACAAGTACATAAATAGGAGAATTAGTGCCATGTGTAAAGAATAAAGATGTATCCATAACTGAATTTGTGAAGCCAACTTCGAGAAGGTAAGTGCGGAATTCGGTATACCAAGCACAAGGTGCTTGTTTTAGACCATAGATGGCCTTTCGAAGGTGACATACATGATGAGGATTTTGTGCATCGACAAATCCGTGGGGTTGAACCATAAAAACATCTTCGGTGAGTGTGCCTTGGAGGAAAACGTCATTAATGTCGAGTTATCGCAATCACCATCCATTTGTGGTTGCAAGAAATAGTATTAGATAAAAGGTTGATGGTTTAATTACTGGGCTGAATGTCTCGAAATAATCAAGTCCGGGACGTTGATGAAATCCTTTTGCAACAGACGGGCTTTTGCCGTTCAACTTTTTCATCTTTTGTGTATTTAACACGAAAGACCTACGTTACTCCGACACTATATCGGACGACTGGTGTCGGTGTCGACACGACCCGACCCGCGACACGACACACGACCCGACCCGCGACACGACACACGACACGTGTCCGGGGAGGTGTCGACACCGGTGTCGGAAAAGAGTCCGAAATGCAGTGTCGAAATCGGAAGTAGAAAAAAAAAATTGAGTAAAAAAATTCAAATTCGAAACCCTAGATCTAGAAATTGAAGGCCGGGGAAGACGAGAGAAGAAAAAACACATTGGGGCTTTTATTGTAGATGAAAAATCGTGCGTACTATACTCTTCAATCTTTGATTTCACTCATGTTTCAGAATCATCCATGGTTTCCGGCGGTCTTCATCCTCTGTTTTGCGTTGAAGGAGTTTTCTGTTTAGTGTTGGTGGAGTGGTGGGCGTGGTTTACTGACTTATTGGGCTTTGCTCCTTTTTCTTTTCTTTTTTACCTTTAATAAAAATAAAGACCTAAGGTGTGGGTCTGTCAGGAGTATGTGGGAAGAGGGAACAGAATAACAAACCCACGTGATATCATTTATTCATTTCAGCTTTTTTATATTTATTTATTTATTATATGTTTACTTTTTGAGGGATTATATAATGACTTTTCAACTCTTTCACGACCTTTTATCTTATTTTGTTATTTTTATTTTAATTTTATTATTTATTAATATTTTAATCTTTATTTTATTATTAATTTAATAATTATTTTAAAACTTTTACAAAAAGTGTCGCTATTTTTTATCGACACTTTGTCTAAGAGCCGTGTCTAAAACACAAGTCAAGACACTCCTTTGACCGTGTCGGAGTGTCTGCAAATATTTGGATCGGGGTGTCGGATACTCCGACACCTTGTCGGACACGACACCGACACTCGTGTTTGAGTAACATAGCGAAAGACCCATTTGCAACCAACCGAAGTTTGAGCTGAAGAAGGTGGAACAAGCTCCCACGTACCATTGTCAATGAGAGACTGGTATTGCATTTCCATAGCAGCTTTCCAAGATGTGTCAAATAAAGCTTGTTTGACAGTTTTTGGTTTCAGTTGGTTGAACTTGGGATTAAGGTTCAGTTTGTTAATTGGCTTAAAGATATTATTCGTCGCTCCTGTAGTTATGGTGCGAGGTGGAGGAGGTGGTGGGGTTGGTATAGGTGTTTCTGGATGTGGCGTAGGTGTAGGGGATGTTTGTGGGGATGGGGCTGCTGCAGTTTGTGTAAGTGGCTGCTGGAAGACAATTGGTGATGGGGGAGTGATGGGAGGTTGCTGCATTGGTTGAGGAGTTTGTGTTACAGTAGTAGCAAGTTCAAATGAACACCATTCATCTAAAGTGTCATCAGTAACGGGGGCGGAAGCATGAGTTTTAGAAAATGGATATGTGTCTTCCACAAACCTTACATGCCTAGAAGAGTAAATGCAGTGAGAAGATGGATCAAGACATAAATAAGCATGCTGTGTAGGTGAATAGCCAAGAAAAATGCAAGCAATGGACTTAGGTGCAAGCTTATGAGGAGTGTATGGCCTTAGCTGAGGGTAGCATAGACAACCAAAATTGTGAAGGTGAGTGTACTTAGAAGGTGTCCCAAATAACTTATGATACGGAGATTGATTATGTATAGTTGGAGTAGGCATCCTATTAATTAGATAAAAAGAAGTAAGAATGGCATGAAAGCAATACTTAAGGGGTATTGATGCATGAGCGAGGAGTGCCAAACTTGTTTTGACAATGTGTCTATGACGACGCTCGGCAAACCCGTTGTGTTCGGGTGTGTGGGGCGGCGACGTCAGATGAGTAATGCCATTAGAAGCAAGATATGCAACAAGTTTTTCATATTCACCACCATTGTCTTTAAACTTAGGAAAGATTATAGCAAGTTTTCCAAGGCTTTAAGCTTAGGAAAGATTATAGCAGTGTCCGATCTATTTTTAATAGGATATAGCCACACATAGTTGGTGAAATGATCTACAAGTACCACATAATATTTAAAGTTATCAAATGAATAAATTGGGGAGCACCAAACATCATTGTAAATATCTTCAAGAGGGGAGGAAGTGGCAAGAGTAGATAAACAAAATGGGAGTTTGTGCCTTTTATTAATCAAACATGAATTACAATGCGAATCGGGAAAATGGGTAACTGCAAAGCTAGATAATAACTGTTTTAAATTTGAAGTGGAAGGATGACCAAAATGATGGTGCCAATCAACGTTCATGGTGATGTTGTAGATCCTAGGTTAAAAAGAAAAAAGATTGTGGCCACTCATATACTCCATCTTTAGTTGGTCCTTGGAAGAGAGTCTCCTTGTGTTAGGTTTCTTGACATAGAAGAAAGAAGATGAGAATTCAATATTGATATTATTATGATGACAAAATTGACGAATTGAAATGATATTTCTATGCATTGAGGGGACACAAAGGACATTAGATAATTTAAAAGCATGAGAGGATGTAGGGAGAAGAGTAGAACAAGTGTGTGAAATCGGAAGATCGAAGCCGTCGCCAATCATTATTTCATCTGTACCATCATACGGAAAATGGTGAGAGAGGTTTGTCAAGTCGGTAGTGACATGATGACTCGCACCACTATCTATCTACCATGCCGGATTTGCTTGAGAGGAGGAGGCTGCCTAGGCATCGACAACATGAGCATGAGGTTGGCCATTGTTGCCAGTTCCACGTGGTGGGAGATTGCAGTAGGATGAAGCTCTTTAAAGGTGGGACAATAGGCAAGTACATGACCCCTCACATTGCACCACTGACATTTACCTTCAAAGGGTTTAAAGTTCTTGGGAGGGTGTGTCGAGTTAGGAGTTGCAGTTGTTGGAGATGGGGTGTTGTGTTTGTTGTTCCAGCGAGTGTTAGTGTAGTTTTCCGTTTCCAGAAAGGTGTAGTTTTCCGTTGCTGGGTGTAGTTTTCCGTTGCCGGAAAAGTCACAGATTTCTTACGAGCAACAATCATAAGTTCCTTGTTGATAAGCTTCTCATTAAGCTCTTCAAAGGATATTGGAGGGTCCCGATGACATAATCAATGACAGATTGATAGTTTTCATCGAGCCCCTCAAGAACACGATCAGTGACTGTTAGCTATAAAATTAGAACAAATTATCTGGATATTACGTAAATATAAACTGAATAATTTGTCGCGCCTTGGTCGAACCACTGCTTTAAAAGACAATTCCGCGCTACCTCCGATGCAGTAGAACACTTGCGGTTGCCCTCCAGGGTTAACACGACACCAAGGTTTGTGTGCACTCACAAACCTCGATTGNAGCCCCTCAAGAACACGATCAGTGACTGTTAGCTATAAAATTAGAACAAATTATCTGGATATTACGTAAATATAAACTGAATAATTTGTCACGCCTTGGTCGAACCACTGCTTTAAAAGACAATTCCGCGCTACCTCCGATGCAGTAGAACACTTGCGGTTGCCCTCCAGGGTTAACACGACACCAAGGTTTGTGTGCACTCACAAACCTCGATTGGAGACCAGAATANCTTGCGGTTGCCCTCCAGGGTTAACACGACACCAAGGTTTGTGTGCACTCACAAACCTCGATTGGAGACCAGAATACTTGCCTAGAACAGAAGAGTGTTTGAGAGTTTGAGAGAGAATTGAGAGAACAATTTTTGTGATGTGTGTGTATGAAATACGAAAGAGGAAGTATTTATTAAGAAAAGTGTAACAATCATAAACAGCTAGTAGTGGAAGTAGTGGGCAGTTACAACGTTTAGTGGGTTGATTAATTGGGTAGTTACAACATTTAGTGGGTTGATTAATTCTTGTGACTGTTAGAATTAATCAAAACCACTTCTGACCAAAAAGAATAACCCGGCCCAAAAAACCCACCCTACGCCCGCGAACCGCATTCGCCAAGTACCAAGGCCCACGGCCCGAGCCCGCCCCGGCCGGCCAGCGCGCTCGCGCGTGTGTTTGTTTTGTGTCCACCCATGCCACTCTCATGCTTTCTTAAACAAGTGTTTCACTCAAGTCCCCAAATATAAAAAATAAATGAAGTTGGTGTTTTTCCAATGTAGGACTTTTCACATTCTCACTTTTTCTACTTTTTTCTTTTGCACTTTCACTAGGACTTCCAACAATCCCCCACAGGTCCGAAGATGAGAAGAAAAAAGAAAGAAATGAAGGAATTGAATTTTTGGGCAAAATAAACAATTGAATAAGTGTCAATGTCTTGCGACTTGAATTAACACTTAGTGACATTCAAGCTAGGATCTCTTTCCTACCAAGTGACTTTCGTTTTGAACTTAATAGGAGGTATGGAGTTGACTTCATCATTTCCGGATACCCAGTTGGCATCACAAAATCCCTCCAACGCTCCTGGAAACTTGGAGTAGTGCAATCCCTAATCCATGGTACCCCTTGGATACCTAAGCAACCGCCTCAAAGCACCCCAATGCTCATTGCTTGGGTTATGAGTGTACCTGCTCAACCTACTTACAGAATAGGCAATAGGCAATTGCAGGTCTAGTATAGTTCATAAGAAACATGACACTATCAATAATTTTAGCATACTCGCATTGACAAACAGGATCACCTTTATTTTTCTTTAAATGGATGCTTATATCATAGGGGGTCTTGATTGGATCGACATTGAATGAATCAAACTTTTTAAGAAGTTTTTCAACATAGTGAGCTTGACTAAGACATATGCCATTTGGAGTTCTAATAATTTTTACTCCCAAAATAACATCTGCCTCACCCATGTCTTTCATTTCAAAATTTGTACTCAAAAGTTCTTTTGTTTCATTCACTCGATCCAAATCAGTACCAAAAATTAGAATATCATCCACATAAAGAAAAATAATCACACAACCAAAAGAATCATGTTTAGAATAAACGCAAGAGTCACCTTCATTTACATGATAGCCATTACCAGTCATTGTCTTGTCAAACTTGTCATGCCACTGCTTAGGGGCTTGCTTAAGCCCATACAATGACTTGACCAGTTTACAAACTTTGTTCTCTTGACCTGGGAGTCTGGGACAACAAAACCTTCAGGTTGAACCATATAAATTTCTTCATCTAAATCACCATTCAAAAATGCAGTTTTCACATCCATTTGATGCACAACAAGATCATGAATGCATTGTTAAGATAAAAATAGTAAAGCCATATTTAAAGAAGAGTATTTTAAGGAAAACTTATTTTAATGTTTTGTTGTTTGTTAAAGATTTAG

mRNA sequence

TGACAACTTAAGAAAATAGGCTGAAAATAATGAGCAAGCAAGAACTCAAATTCTCGCTCTCTTAATCTTGATGTCAATTACTCATAGTATTACCCAAAACCCACTTACTAATCATGTCACCTTGCAATCCTTTGGAAACAATTTCATTCCCAAAATAGAAAGATTTCCCAATCGAATTCATCAAGCACCCATTAAACTCACAAAATGTCTCTCGAATTCATCATCAATCCAATCAACCCACAAAATTGCCCATGAATTTGATCCCAATATTCCAATTGAAGAGGCTCAAACTCCACCCTGTTCATGGTATTCTGATCCCGAATTTTATTCCCATGAGATTGATCGTGTTTTCTACAGTGGATGGCGAGTTGTAGTTATGGTGCGAGGTGGAGGAGGTGGTGGGGTTGGTATAGGTGTTTCTGGATGTGGCGTAGGTGTAGGGGATGTTTGTGGGGATGGGGCTGCTGCAGTTTGTATTTAG

Coding sequence (CDS)

ATGTCAATTACTCATAGTATTACCCAAAACCCACTTACTAATCATGTCACCTTGCAATCCTTTGGAAACAATTTCATTCCCAAAATAGAAAGATTTCCCAATCGAATTCATCAAGCACCCATTAAACTCACAAAATGTCTCTCGAATTCATCATCAATCCAATCAACCCACAAAATTGCCCATGAATTTGATCCCAATATTCCAATTGAAGAGGCTCAAACTCCACCCTGTTCATGGTATTCTGATCCCGAATTTTATTCCCATGAGATTGATCGTGTTTTCTACAGTGGATGGCGAGTTGTAGTTATGGTGCGAGGTGGAGGAGGTGGTGGGGTTGGTATAGGTGTTTCTGGATGTGGCGTAGGTGTAGGGGATGTTTGTGGGGATGGGGCTGCTGCAGTTTGTATTTAG

Protein sequence

MSITHSITQNPLTNHVTLQSFGNNFIPKIERFPNRIHQAPIKLTKCLSNSSSIQSTHKIAHEFDPNIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRVVVMVRGGGGGGVGIGVSGCGVGVGDVCGDGAAAVCI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo25466.1Spo25466.1mRNA


Homology
[Close]
BLAST of Spo25466.1 vs. NCBI nr
Match: gi|731377707|ref|XP_010667951.1| (PREDICTED: choline monooxygenase, chloroplastic-like isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 120.2 bits (300), Expect = 2.900e-24
Identity = 64/96 (66.67%), Postives = 68/96 (70.83%), Query Frame = 1 

		  

Query: 10  NPLTNHVTLQSFGNNFIPKIERFP----NRIHQAPIKLTKCLSNSSSIQSTHKIAHEFDP 69
           N LT+HVT   F NN   K +RFP    N   Q PIKL  CLS+S+  QSTHKI HEFDP
Sbjct: 7   NRLTHHVTFHLFDNNL--KRQRFPFNFPNYKIQTPIKLNICLSSSN--QSTHKIVHEFDP 66

Query: 70  NIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRVV 102
           NIPIEEA TPP SWY DP FYS EID VFYSGWRVV
Sbjct: 67  NIPIEEAVTPPSSWYFDPSFYSFEIDHVFYSGWRVV 98
[Close]
BLAST of Spo25466.1 vs. NCBI nr
Match: gi|731377711|ref|XP_010667952.1| (PREDICTED: choline monooxygenase, chloroplastic-like isoform X3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 120.2 bits (300), Expect = 2.900e-24
Identity = 64/96 (66.67%), Postives = 68/96 (70.83%), Query Frame = 1 

		  

Query: 10  NPLTNHVTLQSFGNNFIPKIERFP----NRIHQAPIKLTKCLSNSSSIQSTHKIAHEFDP 69
           N LT+HVT   F NN   K +RFP    N   Q PIKL  CLS+S+  QSTHKI HEFDP
Sbjct: 7   NRLTHHVTFHLFDNNL--KRQRFPFNFPNYKIQTPIKLNICLSSSN--QSTHKIVHEFDP 66

Query: 70  NIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRVV 102
           NIPIEEA TPP SWY DP FYS EID VFYSGWRVV
Sbjct: 67  NIPIEEAVTPPSSWYFDPSFYSFEIDHVFYSGWRVV 98
[Close]
BLAST of Spo25466.1 vs. NCBI nr
Match: gi|731377704|ref|XP_010667950.1| (PREDICTED: choline monooxygenase, chloroplastic-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 120.2 bits (300), Expect = 2.900e-24
Identity = 64/96 (66.67%), Postives = 68/96 (70.83%), Query Frame = 1 

		  

Query: 10  NPLTNHVTLQSFGNNFIPKIERFP----NRIHQAPIKLTKCLSNSSSIQSTHKIAHEFDP 69
           N LT+HVT   F NN   K +RFP    N   Q PIKL  CLS+S+  QSTHKI HEFDP
Sbjct: 7   NRLTHHVTFHLFDNNL--KRQRFPFNFPNYKIQTPIKLNICLSSSN--QSTHKIVHEFDP 66

Query: 70  NIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRVV 102
           NIPIEEA TPP SWY DP FYS EID VFYSGWRVV
Sbjct: 67  NIPIEEAVTPPSSWYFDPSFYSFEIDHVFYSGWRVV 98
[Close]
BLAST of Spo25466.1 vs. NCBI nr
Match: gi|411107498|gb|AFW04225.1| (choline monooxygenase [Suaeda maritima])

HSP 1 Score: 82.8 bits (203), Expect = 5.100e-13
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 1 

		  

Query: 10  NPLTNH--VTLQSFGNNFIPKIERFP-----NRIHQAPIKLTKCLSNSSSIQSTHKIAHE 69
           +P  NH  V+ Q   NN + K    P     N +       +   ++S S  S +++ HE
Sbjct: 29  SPKDNHLNVSQQQNNNNPLLKFRTQPTKLVANAVASPVFPASSTTTSSPSSSSINQLVHE 88

Query: 70  FDPNIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRV 101
           FDP IP E+A TPP SWY++P FYSHE+DR+FY GW+V
Sbjct: 89  FDPKIPPEDAFTPPSSWYTEPAFYSHELDRIFYKGWQV 126
[Close]
BLAST of Spo25466.1 vs. NCBI nr
Match: gi|21217447|gb|AAM43920.1| (choline monooxygenase [Suaeda liaotungensis])

HSP 1 Score: 82.8 bits (203), Expect = 5.100e-13
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 1 

		  

Query: 10  NPLTNH--VTLQSFGNNFIPKIERFP-----NRIHQAPIKLTKCLSNSSSIQSTHKIAHE 69
           +P  NH  V+ Q   NN + K    P     N +       +   ++S S  S +++ HE
Sbjct: 29  SPKDNHLNVSQQQNNNNPLLKFRTQPTKLVANAVASPVFPASSTTTSSPSSSSINQLVHE 88

Query: 70  FDPNIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRV 101
           FDP IP E+A TPP SWY++P FYSHE+DR+FY GW+V
Sbjct: 89  FDPKIPPEDAFTPPSSWYTEPAFYSHELDRIFYKGWQV 126
[Close]
BLAST of Spo25466.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B582_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_013240 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.000e-24
Identity = 64/96 (66.67%), Postives = 68/96 (70.83%), Query Frame = 1 

		  

Query: 10  NPLTNHVTLQSFGNNFIPKIERFP----NRIHQAPIKLTKCLSNSSSIQSTHKIAHEFDP 69
           N LT+HVT   F NN   K +RFP    N   Q PIKL  CLS+S+  QSTHKI HEFDP
Sbjct: 7   NRLTHHVTFHLFDNNL--KRQRFPFNFPNYKIQTPIKLNICLSSSN--QSTHKIVHEFDP 66

Query: 70  NIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRVV 102
           NIPIEEA TPP SWY DP FYS EID VFYSGWRVV
Sbjct: 67  NIPIEEAVTPPSSWYFDPSFYSFEIDHVFYSGWRVV 98
[Close]
BLAST of Spo25466.1 vs. UniProtKB/TrEMBL
Match: Q0Z9W7_SUASA (Choline monooxygenase OS=Suaeda salsa PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.500e-13
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 1 

		  

Query: 10  NPLTNH--VTLQSFGNNFIPKIERFP-----NRIHQAPIKLTKCLSNSSSIQSTHKIAHE 69
           +P  NH  V+ Q   NN + K    P     N +       +   ++S S  S +++ HE
Sbjct: 29  SPKDNHLNVSQQQNNNNPLLKFRTQPTKLVANAVASPVFPASSTTTSSPSSSSINQLVHE 88

Query: 70  FDPNIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRV 101
           FDP IP E+A TPP SWY++P FYSHE+DR+FY GW+V
Sbjct: 89  FDPKIPPEDAFTPPSSWYTEPAFYSHELDRIFYKGWQV 126
[Close]
BLAST of Spo25466.1 vs. UniProtKB/TrEMBL
Match: K7SRM7_SUAMA (Choline monooxygenase OS=Suaeda maritima PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.500e-13
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 1 

		  

Query: 10  NPLTNH--VTLQSFGNNFIPKIERFP-----NRIHQAPIKLTKCLSNSSSIQSTHKIAHE 69
           +P  NH  V+ Q   NN + K    P     N +       +   ++S S  S +++ HE
Sbjct: 29  SPKDNHLNVSQQQNNNNPLLKFRTQPTKLVANAVASPVFPASSTTTSSPSSSSINQLVHE 88

Query: 70  FDPNIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRV 101
           FDP IP E+A TPP SWY++P FYSHE+DR+FY GW+V
Sbjct: 89  FDPKIPPEDAFTPPSSWYTEPAFYSHELDRIFYKGWQV 126
[Close]
BLAST of Spo25466.1 vs. UniProtKB/TrEMBL
Match: Q8LLR4_9CARY (Choline monooxygenase OS=Suaeda liaotungensis GN=CMO PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.500e-13
Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 1 

		  

Query: 10  NPLTNH--VTLQSFGNNFIPKIERFP-----NRIHQAPIKLTKCLSNSSSIQSTHKIAHE 69
           +P  NH  V+ Q   NN + K    P     N +       +   ++S S  S +++ HE
Sbjct: 29  SPKDNHLNVSQQQNNNNPLLKFRTQPTKLVANAVASPVFPASSTTTSSPSSSSINQLVHE 88

Query: 70  FDPNIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRV 101
           FDP IP E+A TPP SWY++P FYSHE+DR+FY GW+V
Sbjct: 89  FDPKIPPEDAFTPPSSWYTEPAFYSHELDRIFYKGWQV 126
[Close]
BLAST of Spo25466.1 vs. UniProtKB/TrEMBL
Match: A0A0B5J4L5_SALBI (Choline monooxygenase OS=Salicornia bigelovii GN=CMO PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.600e-13
Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 1 

		  

Query: 46  CLSNSSSIQSTHKIAHEFDPNIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRV 101
           CL+ +++  S  ++ HEFDP IP E+A TPP SWY++P FYSHE+DR+FY GW+V
Sbjct: 69  CLTTTTTPSSVKQLVHEFDPKIPAEDALTPPSSWYTEPAFYSHELDRIFYKGWQV 123
[Close]
BLAST of Spo25466.1 vs. ExPASy Swiss-Prot
Match: CHMO_SPIOL (Choline monooxygenase, chloroplastic OS=Spinacia oleracea GN=CMO PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.000e-14
Identity = 46/99 (46.46%), Postives = 59/99 (59.60%), Query Frame = 1 

		  

Query: 6   SITQNPLTNHVTLQSFGNNFIPKIERFPNRIHQ----APIKLTKCLSNSSSIQSTHKIAH 65
           SI QN  T + TL+S          R PN+I      AP   +   +  SSIQS   + H
Sbjct: 39  SIPQN--TTNPTLKS----------RTPNKITTNAVAAPSFPSLTTTTPSSIQS---LVH 98

Query: 66  EFDPNIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRV 101
           EFDP IP E+A TPP SWY++P FYSHE++R+FY GW+V
Sbjct: 99  EFDPQIPPEDAHTPPSSWYTEPAFYSHELERIFYKGWQV 122
[Close]
BLAST of Spo25466.1 vs. ExPASy Swiss-Prot
Match: CHMO_BETVU (Choline monooxygenase, chloroplastic OS=Beta vulgaris GN=CMO PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.000e-14
Identity = 44/100 (44.00%), Postives = 59/100 (59.00%), Query Frame = 1 

		  

Query: 8   TQNPLTNHVTLQSFGNNFI--PKIERFPNRIHQ----APIKLT-KCLSNSSSIQSTHKIA 67
           T  PL N+  L S  N  +  P I    N+I      +P+  T K  SN+ S  S   + 
Sbjct: 32  TSIPLNNNNNLLSNKNKILQTPNINTSTNKIITKAVASPVFPTLKTTSNTPS--SIRSLV 91

Query: 68  HEFDPNIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRV 101
           HEFDP IP E+A TPP +WY++P FYSHE++R+FY GW+V
Sbjct: 92  HEFDPEIPPEDALTPPSTWYTEPAFYSHELERIFYKGWQV 129
[Close]
BLAST of Spo25466.1 vs. ExPASy Swiss-Prot
Match: CHMO_ARATH (Choline monooxygenase, chloroplastic OS=Arabidopsis thaliana GN=At4g29890 PE=2 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 8.600e-13
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 1 

		  

Query: 52  SIQSTHKIAHEFDPNIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRVV 102
           ++    K+  EFDP IP+E A TPP SWY+DP+FYS E+DRVFY GW+ V
Sbjct: 50  AVSDISKLVTEFDPKIPLERASTPPSSWYTDPQFYSFELDRVFYGGWQAV 99
[Close]
BLAST of Spo25466.1 vs. ExPASy Swiss-Prot
Match: CHMO_ATRHO (Choline monooxygenase, chloroplastic OS=Atriplex hortensis GN=CMO PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.600e-12
Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 1 

		  

Query: 40  PIKLTKCLSNSSSIQSTHKIAHEFDPNIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWR 99
           P   T   +  SSIQS  K   +FDP +P E+A TPP SWY++P FY+HE+DR+FY GW+
Sbjct: 66  PSVTTTTTTTPSSIQSLVK---DFDPLVPAEDALTPPSSWYTEPAFYAHELDRIFYKGWQ 123

Query: 100 V 101
           V
Sbjct: 126 V 123
[Close]
BLAST of Spo25466.1 vs. ExPASy Swiss-Prot
Match: CHMO_AMATR (Choline monooxygenase, chloroplastic OS=Amaranthus tricolor GN=CMO PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 9.600e-12
Identity = 36/100 (36.00%), Postives = 57/100 (57.00%), Query Frame = 1 

		  

Query: 1   MSITHSITQNPLTNHVTLQSFGNNFIPKIERFPNRIHQAPIKLTKCLSNSSSIQSTHKIA 60
           ++I  S+  N   + +T ++  N  IPK    P  +  + I      + + +I+   +I 
Sbjct: 33  INIPSSLNNNINISKITSKT--NKIIPKAVASP--VIPSSINSNNITTTTPNIK---RII 92

Query: 61  HEFDPNIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRV 101
           HEFDP +P E+  TPP +WY+DP  YSHE+DR+F  GW+V
Sbjct: 93  HEFDPKVPAEDGFTPPSTWYTDPSLYSHELDRIFSKGWQV 125
[Close]
BLAST of Spo25466.1 vs. TAIR (Arabidopsis)
Match: AT4G29890.1 (choline monooxygenase, putative (CMO-like))

HSP 1 Score: 74.7 bits (182), Expect = 4.900e-14
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 1 

		  

Query: 52  SIQSTHKIAHEFDPNIPIEEAQTPPCSWYSDPEFYSHEIDRVFYSGWRVV 102
           ++    K+  EFDP IP+E A TPP SWY+DP+FYS E+DRVFY GW+ V
Sbjct: 50  AVSDISKLVTEFDPKIPLERASTPPSSWYTDPQFYSFELDRVFYGGWQAV 99
The following BLAST results are available for this feature:
BLAST of Spo25466.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|731377707|ref|XP_010667951.1|2.9e-2466.6PREDICTED: choline monooxygena... [more]
gi|731377711|ref|XP_010667952.1|2.9e-2466.6PREDICTED: choline monooxygena... [more]
gi|731377704|ref|XP_010667950.1|2.9e-2466.6PREDICTED: choline monooxygena... [more]
gi|411107498|gb|AFW04225.1|5.1e-1341.8choline monooxygenase [Suaeda ... [more]
gi|21217447|gb|AAM43920.1|5.1e-1341.8choline monooxygenase [Suaeda ... [more]
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BLAST of Spo25466.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8B582_BETVU2.0e-2466.6Uncharacterized protein OS=Bet... [more]
Q0Z9W7_SUASA3.5e-1341.8Choline monooxygenase OS=Suaed... [more]
K7SRM7_SUAMA3.5e-1341.8Choline monooxygenase OS=Suaed... [more]
Q8LLR4_9CARY3.5e-1341.8Choline monooxygenase OS=Suaed... [more]
A0A0B5J4L5_SALBI4.6e-1356.3Choline monooxygenase OS=Salic... [more]
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BLAST of Spo25466.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CHMO_SPIOL6.0e-1446.4Choline monooxygenase, chlorop... [more]
CHMO_BETVU6.0e-1444.0Choline monooxygenase, chlorop... [more]
CHMO_ARATH8.6e-1358.0Choline monooxygenase, chlorop... [more]
CHMO_ATRHO5.6e-1252.4Choline monooxygenase, chlorop... [more]
CHMO_AMATR9.6e-1236.0Choline monooxygenase, chlorop... [more]
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BLAST of Spo25466.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G29890.14.9e-1458.0choline monooxygenase, putativ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017941Rieske [2Fe-2S] iron-sulphur domainunknownSSF50022ISP domaincoord: 60..104
score: 3.0

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006725 cellular aromatic compound metabolic process
biological_process GO:0010190 cytochrome b6f complex assembly
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0045454 cell redox homeostasis
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009507 chloroplast
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function GO:0004497 monooxygenase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0016491 oxidoreductase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo019280.71Barchart | Table
Spo144050.69Barchart | Table
Spo126820.68Barchart | Table
Spo123320.67Barchart | Table
Spo219560.67Barchart | Table
Spo095190.66Barchart | Table