Spo25393 (gene) | SpinachBase

Overview


Name	Spo25393
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Elongation factor 1 beta
Location	chr1 : 3794025 .. 3796521 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTCATAGTCGGTTGATGATTTAACCCGGAATTGTTCTCGGAACTCGGGTTACGCAATCGGCCCGAAACCAAATAAATAAGACAAAATCGGTGCTCTCAAAACCCCCCTCCTCCTCTCAAAACCCTACAAGAAAAGCAGCATCTTGTCGTTGTAGTCGGAGGCGCCTCACCTCTCTTTCTCTGTTGCTGCTATTCTCGGTAATTTATCTACAATCGACATTTCTGTTGTTTTTATTTGTATTTTTATTGATTCAAATCTAGATTGTTAAGCCTGTATTCTGTTCATTTAGGGGATTTTGTTGTTTAGGGTTTTTCGTTTTAATTGACAATTTAAAGCCAAGATTTGAACATTTTAACAAGCTTGGCTTGTTTTTAGACATTAGATTTGATTGAGTAATTTAATGTATGCTGTAATCAATAGTTTACTGTGTTTCTCAACATAAATTTGATTAAAGATCCGAACCTGCAGTTTCTGCATCAATGGCTGTCACATTTTACGATCTGAGCTCCGATGCTGGTTTGAAAAAGCTCGACGAGTACCTCCTTAGCAGGAGTTACATCACTGGGTGAGCCTGATCATTTTAATTGCGTAGTTTTTTTGAAATTCCAATTACATATTGATCTGTAGTCTGATTGTGGTGCTTTTCTGTATGTCTGATATGCTAGTTACCAAGCCTCCAAGGATGATCTCACCGTGTATTCTTCCGTCCCAAAGAAATCTTTGGATGCGTATGTGAATGTATCCAGGTGGTACAAACACATCGATGCGCTATTGAGGATCTCGTAAGATTACAATTTACTGCTATGAGCTTTAGTTTGATGTTCTTCTGATTTGGTTCAGTTATTGTTTATGAATTCCAGGGTTTTCTTTTTGTTAAGATGGTTGAATGTTGTCTTGTTGTTTTTTCCATTAGTGGCGTGTCTGGTGAGGGATCAGGTGTTACAGTTGAGGGTAATGCTCCCGCTTCTGACGTCGCCACTCCCCCTGCTGCTGACTCTAAGGTGGAGTTATCTTTAAGTTGTGTTATTGGGTTCTATTTGGTTATAATGCTGTGCAATTCTGAAAAACTTTCTGCATTGTGCTTTTCTGCTATCTGATCCATGTGATTGAAATATTTTCAGGCTTCAGCTGCCGATGAGGAAGATGACGACGATGTTGATCTCTTTGGTGAAGAGACTGAAGAGGAGAAGAAGGCTGCTGAAGAACGTTCTGCAGCTGCAAAGTCATCCATTAAAAAGAAAGAGTGTGAGTATAAAATTCCTGTCTGTTAAATGCTAAGTTCATACTTCTTCTGTTGAATGGACGTATTTAGTTTGAGTTTGGAGTGAAATTGTACAAGAAACATGAAAATTATACACATGACACCCAATCCTATATACCGATTTGCGTATGAGCCCTCCTACGTTTCGTAACCAAGCTCTTCATATAGCACATCCTTTCTTTGTAGCGTTGTTTTGATGTTTTGTTTTCTCATTTGTTGTGCAGCTGGAAAGTCATCAGTCTTGTTGGATGTGAAGCCATGGGATGATGAAACTGACATGAAGAAGCTTGAGGAAGCTGTCAGGAGTGTCGAGAAGGAGGGTTTGCTATGGGGAGCATGTATGTTTGTTTACAACTATGTTGATTACATTTTGTTTCGATTTCCATTTTAATTTACTGAACTGAGTTCATTTTGTTTGACAGCCAAACTCGTGCCAGTTGGGTATGGTATCAAGAAAATGACAATCATGATGACAATCGTGGATGACTTGGTCTCCGTTGATGATTTGATCGAGGATCATTTGACAGCTGAGCCGATCAATGAGTATGTGCAGAGTTGTGATATTGTGGCCTTCAACAAGATTTGAGAGGGATGATGCGCTTTCTGCATCTCCAATCTAAATGTTATCATGCTACTATTTTGTTAGAAAAACTGGCTTTGTGCCCATGTTGAGTTGCTTGTTTCAAGACCATTAAGAAGTAGCAATAATATTGTGTTTTTTTGCCGCCTTGTCTTCCTTTTGTGAAATTTATTTATGCTGCCTACTGTGGCCTGTGGGTAGGTTGTATTGTTTTGGTGTGAAGTTGTAATTCACTGAAATTAGGTTAGGAGAAGAGTTGAATTAAATCGGGTCTTGCGTAAAACAGGGCCAAGGAAAAGACAATTGATGCTCTTGAGCAAATTGCAATAACACGGTCTGTAGATCTTTGGCGATGAAATTTGTGATGATTATGTCAGGACGAGGAAAGGATGACATTCTGTTTTTATGTTGGGAGCATAAACTGGATGGATTACATATGCAGTATCCAAATTTCAGGTCCAAGGAAGCATGCCATGAAGGGAAGAGGGCAGGGCAGCTAACTTGTAATCCCTCCGTTCCCAAATAAGTGTTATTTTTCTATAAATGACGTTCCTTATAAGTGTCAACTTTTCATTTTTAAACATACAATTTTCTCACTTTTCCTTGTACTTTTCCTTTTTTTTTTCTTTCTTAAAAAAAACATTTCCATTCATT

mRNA sequence

AGCTCATAGTCGGTTGATGATTTAACCCGGAATTGTTCTCGGAACTCGGGTTACGCAATCGGCCCGAAACCAAATAAATAAGACAAAATCGGTGCTCTCAAAACCCCCCTCCTCCTCTCAAAACCCTACAAGAAAAGCAGCATCTTGTCGTTGTAGTCGGAGGCGCCTCACCTCTCTTTCTCTGTTGCTGCTATTCTCGTTTCTGCATCAATGGCTGTCACATTTTACGATCTGAGCTCCGATGCTGGTTTGAAAAAGCTCGACGAGTACCTCCTTAGCAGGAGTTACATCACTGGTTACCAAGCCTCCAAGGATGATCTCACCGTGTATTCTTCCGTCCCAAAGAAATCTTTGGATGCGTATGTGAATGTATCCAGGTGGTACAAACACATCGATGCGCTATTGAGGATCTCTGGCGTGTCTGGTGAGGGATCAGGTGTTACAGTTGAGGGTAATGCTCCCGCTTCTGACGTCGCCACTCCCCCTGCTGCTGACTCTAAGGCTTCAGCTGCCGATGAGGAAGATGACGACGATGTTGATCTCTTTGGTGAAGAGACTGAAGAGGAGAAGAAGGCTGCTGAAGAACGTTCTGCAGCTGCAAAGTCATCCATTAAAAAGAAAGAGTCTGGAAAGTCATCAGTCTTGTTGGATGTGAAGCCATGGGATGATGAAACTGACATGAAGAAGCTTGAGGAAGCTGTCAGGAGTGTCGAGAAGGAGGCCAAACTCGTGCCAGTTGGGTATGGTATCAAGAAAATGACAATCATGATGACAATCGTGGATGACTTGGTCTCCGTTGATGATTTGATCGAGGATCATTTGACAGCTGAGCCGATCAATGAGTATGTGCAGAGTTGTGATATTGTGGCCTTCAACAAGATTTGAGAGGGATGATGCGCTTTCTGCATCTCCAATCTAAATGTTATCATGCTACTATTTTGTTAGAAAAACTGGCTTTGTGCCCATGTTGAGTTGCTTGTTTCAAGACCATTAAGAAGTAGCAATAATATTGTGTTTTTTTGCCGCCTTGTCTTCCTTTTGTGAAATTTATTTATGCTGCCTACTGTGGCCTGTGGGTAGGTTGTATTGTTTTGGTGTGAAGTTGTAATTCACTGAAATTAGGTTAGGAGAAGAGTTGAATTAAATCGGGTCTTGCGTAAAACAGGGCCAAGGAAAAGACAATTGATGCTCTTGAGCAAATTGCAATAACACGGTCTGTAGATCTTTGGCGATGAAATTTGTGATGATTATGTCAGGACGAGGAAAGGATGACATTCTGTTTTTATGTTGGGAGCATAAACTGGATGGATTACATATGCAGTATCCAAATTTCAGGTCCAAGGAAGCATGCCATGAAGGGAAGAGGGCAGGGCAGCTAACTTGTAATCCCTCCGTTCCCAAATAAGTGTTATTTTTCTATAAATGACGTTCCTTATAAGTGTCAACTTTTCATTTTTAAACATACAATTTTCTCACTTTTCCTTGTACTTTTCCTTTTTTTTTTCTTTCTTAAAAAAAACATTTCCATTCATT

Coding sequence (CDS)

ATGGCTGTCACATTTTACGATCTGAGCTCCGATGCTGGTTTGAAAAAGCTCGACGAGTACCTCCTTAGCAGGAGTTACATCACTGGTTACCAAGCCTCCAAGGATGATCTCACCGTGTATTCTTCCGTCCCAAAGAAATCTTTGGATGCGTATGTGAATGTATCCAGGTGGTACAAACACATCGATGCGCTATTGAGGATCTCTGGCGTGTCTGGTGAGGGATCAGGTGTTACAGTTGAGGGTAATGCTCCCGCTTCTGACGTCGCCACTCCCCCTGCTGCTGACTCTAAGGCTTCAGCTGCCGATGAGGAAGATGACGACGATGTTGATCTCTTTGGTGAAGAGACTGAAGAGGAGAAGAAGGCTGCTGAAGAACGTTCTGCAGCTGCAAAGTCATCCATTAAAAAGAAAGAGTCTGGAAAGTCATCAGTCTTGTTGGATGTGAAGCCATGGGATGATGAAACTGACATGAAGAAGCTTGAGGAAGCTGTCAGGAGTGTCGAGAAGGAGGCCAAACTCGTGCCAGTTGGGTATGGTATCAAGAAAATGACAATCATGATGACAATCGTGGATGACTTGGTCTCCGTTGATGATTTGATCGAGGATCATTTGACAGCTGAGCCGATCAATGAGTATGTGCAGAGTTGTGATATTGTGGCCTTCAACAAGATTTGA

Protein sequence

MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKHIDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEKKAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKEAKLVPVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo25393.1	Spo25393.1	mRNA

Homology

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BLAST of Spo25393.1 vs. NCBI nr
Match: gi|902206403|gb|KNA15452.1| (hypothetical protein SOVF_097960 [Spinacia oleracea])

HSP 1 Score: 409.5 bits (1051), Expect = 3.900e-111
Identity = 223/230 (96.96%), Postives = 224/230 (97.39%), Query Frame = 1


		  
Query: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60
           MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH
Sbjct: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60

Query: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEK 120
           IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEK
Sbjct: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEK 120

Query: 121 KAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AKLV 180
           KAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE      +KLV
Sbjct: 121 KAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKEGLLWGASKLV 180

Query: 181 PVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           PVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI
Sbjct: 181 PVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 230

[Close]

BLAST of Spo25393.1 vs. NCBI nr
Match: gi|902230318|gb|KNA21806.1| (hypothetical protein SOVF_039790 [Spinacia oleracea])

HSP 1 Score: 381.3 bits (978), Expect = 1.100e-102
Identity = 209/232 (90.09%), Postives = 219/232 (94.40%), Query Frame = 1


		  
Query: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60
           MAVTFYDLS+DAGLKKLDEYLLSRSYITGYQASKDDL VYSSV KKSLDAYVNVSRWYKH
Sbjct: 1   MAVTFYDLSTDAGLKKLDEYLLSRSYITGYQASKDDLAVYSSVSKKSLDAYVNVSRWYKH 60

Query: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAAD--EEDDDDVDLFGEETEE 120
           IDALLRISGVS EGSGVTVEG APAS+VATPPAADSKASAAD  +EDDDDVDLFGEETEE
Sbjct: 61  IDALLRISGVSAEGSGVTVEGYAPASEVATPPAADSKASAADDEDEDDDDVDLFGEETEE 120

Query: 121 EKKAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AK 180
           EKKAAEERSAA K+SIKKKESGKSS+LLDVKPWDDETDMKKLEEAVRSV+KE      +K
Sbjct: 121 EKKAAEERSAATKASIKKKESGKSSILLDVKPWDDETDMKKLEEAVRSVQKEGLLWGSSK 180

Query: 181 LVPVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           LVPVG+GIKK+TIMMTIVDDLVSVDDLIEDHLTAEPINE+VQSCDIVAFNKI
Sbjct: 181 LVPVGFGIKKLTIMMTIVDDLVSVDDLIEDHLTAEPINEHVQSCDIVAFNKI 232

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BLAST of Spo25393.1 vs. NCBI nr
Match: gi|870859820|gb|KMT11208.1| (hypothetical protein BVRB_5g110420 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 362.8 bits (930), Expect = 4.200e-97
Identity = 200/231 (86.58%), Postives = 213/231 (92.21%), Query Frame = 1


		  
Query: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60
           MAVTF DLSS AGL  LD YLLSRSYITGYQASKDDLTV+S+VPK SL +YVNVSRWYKH
Sbjct: 1   MAVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKH 60

Query: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEK 120
           IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAAD++DDDDVDLFGEETEEEK
Sbjct: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADDDDDDDVDLFGEETEEEK 120

Query: 121 KAAEERSAAAKSS-IKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AKL 180
           KAAEER+AAA +   KKKESGKSSVLLDVKPWDDETDMKKLEEAVRSV++E      +KL
Sbjct: 121 KAAEERAAAAAAKPAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQQEGLLWGASKL 180

Query: 181 VPVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           VPVGYGIKK+TIMMTIVDDLVSVD+LIED+LT EPINEYVQSCDIVAFNKI
Sbjct: 181 VPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of Spo25393.1 vs. NCBI nr
Match: gi|733214909|ref|NP_001289996.1| (elongation factor 1-delta [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 362.8 bits (930), Expect = 4.200e-97
Identity = 200/231 (86.58%), Postives = 213/231 (92.21%), Query Frame = 1


		  
Query: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60
           MAVTF DLSS AGL  LD YLLSRSYITGYQASKDDLTV+S+VPK SL +YVNVSRWYKH
Sbjct: 1   MAVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKH 60

Query: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEK 120
           IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAAD++DDDDVDLFGEETEEEK
Sbjct: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADDDDDDDVDLFGEETEEEK 120

Query: 121 KAAEERSAAAKSS-IKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AKL 180
           KAAEER+AAA +   KKKESGKSSVLLDVKPWDDETDMKKLEEAVRSV++E      +KL
Sbjct: 121 KAAEERAAAAAAKPAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKL 180

Query: 181 VPVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           VPVGYGIKK+TIMMTIVDDLVSVD+LIED+LT EPINEYVQSCDIVAFNKI
Sbjct: 181 VPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of Spo25393.1 vs. NCBI nr
Match: gi|951068895|ref|XP_014489939.1| (PREDICTED: elongation factor 1-delta-like [Vigna radiata var. radiata])

HSP 1 Score: 345.5 bits (885), Expect = 6.900e-92
Identity = 187/230 (81.30%), Postives = 206/230 (89.57%), Query Frame = 1


		  
Query: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60
           MAVTFYDLSS +GLKKLDEYLLSRSYITGYQASKDDLTVY+++P      YVNVSRW+KH
Sbjct: 1   MAVTFYDLSSASGLKKLDEYLLSRSYITGYQASKDDLTVYAALPTAPSTEYVNVSRWFKH 60

Query: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEK 120
           IDALLRISGVSGEGSGVT++G+  A  VATPPAAD+KA+AA+++DDDDVDLFGEETEEEK
Sbjct: 61  IDALLRISGVSGEGSGVTIKGSLVAEPVATPPAADTKAAAAEDDDDDDVDLFGEETEEEK 120

Query: 121 KAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AKLV 180
           KAAEER+AA K+S KKKESGKSSVLLDVKPWDDETDMKKLEEAVRSV  E      +KLV
Sbjct: 121 KAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVSMEGLLWGASKLV 180

Query: 181 PVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           PVGYGIKK+ IM+TIVDDLVSVD LIE+HLT EPINEYVQSCDIVAFNKI
Sbjct: 181 PVGYGIKKLQIMLTIVDDLVSVDTLIEEHLTVEPINEYVQSCDIVAFNKI 230

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BLAST of Spo25393.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R9I2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_097960 PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 2.700e-111
Identity = 223/230 (96.96%), Postives = 224/230 (97.39%), Query Frame = 1


		  
Query: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60
           MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH
Sbjct: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60

Query: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEK 120
           IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEK
Sbjct: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEK 120

Query: 121 KAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AKLV 180
           KAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE      +KLV
Sbjct: 121 KAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKEGLLWGASKLV 180

Query: 181 PVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           PVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI
Sbjct: 181 PVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 230

[Close]

BLAST of Spo25393.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQJ0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_039790 PE=3 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 7.900e-103
Identity = 209/232 (90.09%), Postives = 219/232 (94.40%), Query Frame = 1


		  
Query: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60
           MAVTFYDLS+DAGLKKLDEYLLSRSYITGYQASKDDL VYSSV KKSLDAYVNVSRWYKH
Sbjct: 1   MAVTFYDLSTDAGLKKLDEYLLSRSYITGYQASKDDLAVYSSVSKKSLDAYVNVSRWYKH 60

Query: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAAD--EEDDDDVDLFGEETEE 120
           IDALLRISGVS EGSGVTVEG APAS+VATPPAADSKASAAD  +EDDDDVDLFGEETEE
Sbjct: 61  IDALLRISGVSAEGSGVTVEGYAPASEVATPPAADSKASAADDEDEDDDDVDLFGEETEE 120

Query: 121 EKKAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AK 180
           EKKAAEERSAA K+SIKKKESGKSS+LLDVKPWDDETDMKKLEEAVRSV+KE      +K
Sbjct: 121 EKKAAEERSAATKASIKKKESGKSSILLDVKPWDDETDMKKLEEAVRSVQKEGLLWGSSK 180

Query: 181 LVPVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           LVPVG+GIKK+TIMMTIVDDLVSVDDLIEDHLTAEPINE+VQSCDIVAFNKI
Sbjct: 181 LVPVGFGIKKLTIMMTIVDDLVSVDDLIEDHLTAEPINEHVQSCDIVAFNKI 232

[Close]

BLAST of Spo25393.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CGQ0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g110420 PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 2.900e-97
Identity = 200/231 (86.58%), Postives = 213/231 (92.21%), Query Frame = 1


		  
Query: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60
           MAVTF DLSS AGL  LD YLLSRSYITGYQASKDDLTV+S+VPK SL +YVNVSRWYKH
Sbjct: 1   MAVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKH 60

Query: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEK 120
           IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAAD++DDDDVDLFGEETEEEK
Sbjct: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADDDDDDDVDLFGEETEEEK 120

Query: 121 KAAEERSAAAKSS-IKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AKL 180
           KAAEER+AAA +   KKKESGKSSVLLDVKPWDDETDMKKLEEAVRSV++E      +KL
Sbjct: 121 KAAEERAAAAAAKPAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQQEGLLWGASKL 180

Query: 181 VPVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           VPVGYGIKK+TIMMTIVDDLVSVD+LIED+LT EPINEYVQSCDIVAFNKI
Sbjct: 181 VPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of Spo25393.1 vs. UniProtKB/TrEMBL
Match: E1CKY6_VIGUN (Elongation factor 1 beta OS=Vigna unguiculata GN=VuEF1b PE=2 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 8.200e-92
Identity = 187/230 (81.30%), Postives = 206/230 (89.57%), Query Frame = 1


		  
Query: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60
           MAVTFYDLSS +GLKKLDEYLLSRSYITGYQASKDDLTVY+++P      YVNVSRW+KH
Sbjct: 1   MAVTFYDLSSASGLKKLDEYLLSRSYITGYQASKDDLTVYAALPTAPSAEYVNVSRWFKH 60

Query: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEK 120
           IDALLRISGVSGEGSGVTV+G+  A  VATPPAAD+KA+AA+++DDDDVDLFGEETEEEK
Sbjct: 61  IDALLRISGVSGEGSGVTVKGSFVAEPVATPPAADTKAAAAEDDDDDDVDLFGEETEEEK 120

Query: 121 KAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AKLV 180
           KAAEER+AA K+S KKKESGKSSVLLDVKPWDDETDMKKLEEAVRSV  E      +KLV
Sbjct: 121 KAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVSMEGLLWGASKLV 180

Query: 181 PVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           PVGYGIKK+ +M+TIVDDLVSVD LIE+HLT EPINEYVQSCDIVAFNKI
Sbjct: 181 PVGYGIKKLQVMLTIVDDLVSVDTLIEEHLTVEPINEYVQSCDIVAFNKI 230

[Close]

BLAST of Spo25393.1 vs. UniProtKB/TrEMBL
Match: A0A0S3RFU3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G223300 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.400e-91
Identity = 189/232 (81.47%), Postives = 207/232 (89.22%), Query Frame = 1


		  
Query: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60
           MAVTFYDLSS +GLKKLDEYLLSRSYITGYQASKDDLTVY+++P      YVNVSRW+KH
Sbjct: 1   MAVTFYDLSSASGLKKLDEYLLSRSYITGYQASKDDLTVYAALPTAPSTEYVNVSRWFKH 60

Query: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAA--DEEDDDDVDLFGEETEE 120
           IDALLRISGVSGEGSGVTV+G+  A  VATPPAAD+KA+AA  D++DDDDVDLFGEETEE
Sbjct: 61  IDALLRISGVSGEGSGVTVKGSLVAEPVATPPAADTKAAAAEDDDDDDDDVDLFGEETEE 120

Query: 121 EKKAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AK 180
           EKKAAEER+AAAK+S KKKESGKSSVL+DVKPWDDETDMKKLEEAVRSV  E      +K
Sbjct: 121 EKKAAEERAAAAKASGKKKESGKSSVLMDVKPWDDETDMKKLEEAVRSVSMEGLLWGASK 180

Query: 181 LVPVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           LVPVGYGIKK+ IM+TIVDDLVSVD LIE+HLT EPINEYVQSCDIVAFNKI
Sbjct: 181 LVPVGYGIKKLQIMLTIVDDLVSVDTLIEEHLTVEPINEYVQSCDIVAFNKI 232

[Close]

BLAST of Spo25393.1 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3)

HSP 1 Score: 362.8 bits (930), Expect = 2.600e-99
Identity = 200/231 (86.58%), Postives = 213/231 (92.21%), Query Frame = 1


		  
Query: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60
           MAVTF DLSS AGL  LD YLLSRSYITGYQASKDDLTV+S+VPK SL +YVNVSRWYKH
Sbjct: 1   MAVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKH 60

Query: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEK 120
           IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAAD++DDDDVDLFGEETEEEK
Sbjct: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADDDDDDDVDLFGEETEEEK 120

Query: 121 KAAEERSAAAKSS-IKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AKL 180
           KAAEER+AAA +   KKKESGKSSVLLDVKPWDDETDMKKLEEAVRSV++E      +KL
Sbjct: 121 KAAEERAAAAAAKPAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKL 180

Query: 181 VPVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           VPVGYGIKK+TIMMTIVDDLVSVD+LIED+LT EPINEYVQSCDIVAFNKI
Sbjct: 181 VPVGYGIKKLTIMMTIVDDLVSVDNLIEDYLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of Spo25393.1 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3)

HSP 1 Score: 325.1 bits (832), Expect = 6.100e-88
Identity = 176/230 (76.52%), Postives = 201/230 (87.39%), Query Frame = 1


		  
Query: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60
           MAVTFYDLSS+AGL+KLDEYLLSRSYI+GYQASKDDL V++++ K     YVNVSRWY H
Sbjct: 1   MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNH 60

Query: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEK 120
           ++ALLRISGVS EG GVTVEG    S VATPP AD+KASAA+++DDDDVDLFGEETEEEK
Sbjct: 61  VEALLRISGVSAEGCGVTVEG----SSVATPPVADTKASAAEDDDDDDVDLFGEETEEEK 120

Query: 121 KAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AKLV 180
           KA+EER+AA K+S KKKESGKSSVLLDVKPWDDETDM KLEEAVRS++ +      +KLV
Sbjct: 121 KASEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLV 180

Query: 181 PVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
            VGYGIKK+ IM+TIVDDLVSVDDL+ED+LTAEP NEY+QSCDIVAFNKI
Sbjct: 181 AVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI 226

[Close]

BLAST of Spo25393.1 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=1 SV=2)

HSP 1 Score: 319.7 bits (818), Expect = 2.500e-86
Identity = 172/228 (75.44%), Postives = 199/228 (87.28%), Query Frame = 1


		  
Query: 5   FYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKHIDAL 64
           F +L+SDAGLKKLDE+LL+RSYITGYQASKDD+TV++++ K     YVN SRWY HIDAL
Sbjct: 4   FPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDAL 63

Query: 65  LRISGVSGEGSGVTVEGNAPASD--VATPPAADSKASAADEEDDDDVDLFGEETEEEKKA 124
           LRISGVS EGSGV VEG+AP ++  VATPPAADSK +AADEEDDDDVDLFGEETEEEKKA
Sbjct: 64  LRISGVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKKA 123

Query: 125 AEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AKLVPV 184
           AEER+A+ K+S KKKESGKSSVL+D+KPWDDETDMKKLEEAV+S++ E      +KLVPV
Sbjct: 124 AEERAASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPV 183

Query: 185 GYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           GYGIKK+ I+ TIVDDLVS+D +IE+ LT EPINEYVQSCDIVAFNKI
Sbjct: 184 GYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of Spo25393.1 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=1 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.800e-84
Identity = 169/228 (74.12%), Postives = 199/228 (87.28%), Query Frame = 1


		  
Query: 5   FYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKHIDAL 64
           F +L+S +GLKKLDE+LL+RSYITGYQASKDD+TV++++ K     +VNVSRW+ HIDAL
Sbjct: 4   FPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDAL 63

Query: 65  LRISGVSGEGSGVTVEGNAPASD--VATPPAADSKASAADEEDDDDVDLFGEETEEEKKA 124
           LRISGVS EGSGV VEG++P ++  VATPPAADSK +AA+EEDDDDVDLFGEETEEEKKA
Sbjct: 64  LRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDTAAEEEDDDDVDLFGEETEEEKKA 123

Query: 125 AEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AKLVPV 184
           AEER+A+ K+S KKKESGKSSVL+D+KPWDDETDMKKLEEAVRS++ E      +KLVPV
Sbjct: 124 AEERAASVKASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPV 183

Query: 185 GYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           GYGIKK+ IM TIVDDLVS+D +IE+ LT EPINEYVQSCDIVAFNKI
Sbjct: 184 GYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of Spo25393.1 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3)

HSP 1 Score: 299.3 bits (765), Expect = 3.600e-80
Identity = 165/230 (71.74%), Postives = 190/230 (82.61%), Query Frame = 1


		  
Query: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60
           MAV+F ++SS+AGLKKLDEYLL+RSYI+GYQAS DDL VYS+       +Y NV+RW+ H
Sbjct: 1   MAVSFTNVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTH 60

Query: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEK 120
           IDALLR+SGV+ +G GV VE  A  S  +TP  AD+KA AAD++DDDDVDLFGEETEEEK
Sbjct: 61  IDALLRLSGVTADGQGVKVESTAVPS-ASTPDVADAKAPAADDDDDDDVDLFGEETEEEK 120

Query: 121 KAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AKLV 180
           KAAEER+AA K+S KKKESGKSSVLLDVKPWDDETDM KLEEAVR+V+ E      +KLV
Sbjct: 121 KAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLV 180

Query: 181 PVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           PVGYGIKK+ IMMTIVDDLVSVD LIED+   EP NEY+QSCDIVAFNKI
Sbjct: 181 PVGYGIKKLQIMMTIVDDLVSVDSLIEDYFYTEPANEYIQSCDIVAFNKI 229

[Close]

BLAST of Spo25393.1 vs. TAIR (Arabidopsis)
Match: AT1G30230.2 (Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6)

HSP 1 Score: 319.7 bits (818), Expect = 1.400e-87
Identity = 172/228 (75.44%), Postives = 199/228 (87.28%), Query Frame = 1


		  
Query: 5   FYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKHIDAL 64
           F +L+SDAGLKKLDE+LL+RSYITGYQASKDD+TV++++ K     YVN SRWY HIDAL
Sbjct: 4   FPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDAL 63

Query: 65  LRISGVSGEGSGVTVEGNAPASD--VATPPAADSKASAADEEDDDDVDLFGEETEEEKKA 124
           LRISGVS EGSGV VEG+AP ++  VATPPAADSK +AADEEDDDDVDLFGEETEEEKKA
Sbjct: 64  LRISGVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKKA 123

Query: 125 AEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AKLVPV 184
           AEER+A+ K+S KKKESGKSSVL+D+KPWDDETDMKKLEEAV+S++ E      +KLVPV
Sbjct: 124 AEERAASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPV 183

Query: 185 GYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           GYGIKK+ I+ TIVDDLVS+D +IE+ LT EPINEYVQSCDIVAFNKI
Sbjct: 184 GYGIKKLQILCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of Spo25393.1 vs. TAIR (Arabidopsis)
Match: AT2G18110.1 (Translation elongation factor EF1B/ribosomal protein S6 family protein)

HSP 1 Score: 313.5 bits (802), Expect = 1.000e-85
Identity = 169/228 (74.12%), Postives = 199/228 (87.28%), Query Frame = 1


		  
Query: 5   FYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKHIDAL 64
           F +L+S +GLKKLDE+LL+RSYITGYQASKDD+TV++++ K     +VNVSRW+ HIDAL
Sbjct: 4   FPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDAL 63

Query: 65  LRISGVSGEGSGVTVEGNAPASD--VATPPAADSKASAADEEDDDDVDLFGEETEEEKKA 124
           LRISGVS EGSGV VEG++P ++  VATPPAADSK +AA+EEDDDDVDLFGEETEEEKKA
Sbjct: 64  LRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDTAAEEEDDDDVDLFGEETEEEKKA 123

Query: 125 AEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEKE------AKLVPV 184
           AEER+A+ K+S KKKESGKSSVL+D+KPWDDETDMKKLEEAVRS++ E      +KLVPV
Sbjct: 124 AEERAASVKASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPV 183

Query: 185 GYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           GYGIKK+ IM TIVDDLVS+D +IE+ LT EPINEYVQSCDIVAFNKI
Sbjct: 184 GYGIKKLHIMCTIVDDLVSIDTMIEEQLTVEPINEYVQSCDIVAFNKI 231

[Close]

BLAST of Spo25393.1 vs. TAIR (Arabidopsis)
Match: AT5G19510.1 (Translation elongation factor EF1B/ribosomal protein S6 family protein)

HSP 1 Score: 244.6 bits (623), Expect = 5.900e-65
Identity = 141/230 (61.30%), Postives = 174/230 (75.65%), Query Frame = 1


		  
Query: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60
           MAVTF DL ++ G+K ++E+L  ++YI+G Q S DD+ VY++VP K  DA+ N S+WY+ 
Sbjct: 1   MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYES 60

Query: 61  IDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADEEDDDDVDLFGEETEEEK 120
           + + L  S   G+  GV   G+A A+     PA +++A AA  +DDDD+DLFG+ETEEEK
Sbjct: 61  VASQLAKS-FPGKAVGVQFGGSAAAA-----PAVEAEAPAAAADDDDDMDLFGDETEEEK 120

Query: 121 KAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEK------EAKLV 180
           KAAEER AA K + K KESGKSSVL+DVKPWDDETDMKKLEEAVR VE        +KLV
Sbjct: 121 KAAEEREAAKKDTKKPKESGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLV 180

Query: 181 PVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           PVGYGIKK+TIM TIVDDLVS D+LIED LT+EP NEY+QSCDIVAFNKI
Sbjct: 181 PVGYGIKKLTIMFTIVDDLVSPDNLIEDFLTSEPNNEYIQSCDIVAFNKI 224

[Close]

BLAST of Spo25393.1 vs. TAIR (Arabidopsis)
Match: AT5G12110.1 (Glutathione S-transferase, C-terminal-like;Translation elongation factor EF1B/ribosomal protein S6)

HSP 1 Score: 236.1 bits (601), Expect = 2.100e-62
Identity = 140/231 (60.61%), Postives = 171/231 (74.03%), Query Frame = 1


		  
Query: 1   MAVTFYDLSSDAGLKKLDEYLLSRSYITGYQASKDDLTVYSSVPKKSLDAYVNVSRWYKH 60
           MAVTF DL ++ GLK L+E+L  ++YI+G Q S DD+ VY++V +   D + N S+WY  
Sbjct: 1   MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDS 60

Query: 61  IDALLRISGVSGEGSGVTVEGN-APASDVATPPAADSKASAADEEDDDDVDLFGEETEEE 120
           + + L  S   G+  GV V G  AP S+    P  +  A+  D +DDDD+DLF +ETE+E
Sbjct: 61  VASHLAKS-FPGKADGVRVGGGVAPPSEAH--PHTEEPAADGDGDDDDDIDLFADETEDE 120

Query: 121 KKAAEERSAAAKSSIKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVEK------EAKL 180
           KKAAEER AA K + K KESGKSSVLL+VKPWDDETDMKKLEEAVRSV+        +KL
Sbjct: 121 KKAAEEREAAKKDTKKTKESGKSSVLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKL 180

Query: 181 VPVGYGIKKMTIMMTIVDDLVSVDDLIEDHLTAEPINEYVQSCDIVAFNKI 225
           VPVGYGIKK+TIMMTIVDDLVSVD+LIEDHLT+EP NEY+QS DIVAFNKI
Sbjct: 181 VPVGYGIKKLTIMMTIVDDLVSVDNLIEDHLTSEPNNEYIQSVDIVAFNKI 228

The following BLAST results are available for this feature:

BLAST of Spo25393.1 vs. NCBI nr
BLAST of Spo25393.1 vs. UniProtKB/TrEMBL
BLAST of Spo25393.1 vs. ExPASy Swiss-Prot
BLAST of Spo25393.1 vs. TAIR (Arabidopsis)

BLAST of Spo25393.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902206403\|gb\|KNA15452.1\|	3.9e-111	96.9	hypothetical protein SOVF_0979...	[more]
gi\|902230318\|gb\|KNA21806.1\|	1.1e-102	90.0	hypothetical protein SOVF_0397...	[more]
gi\|870859820\|gb\|KMT11208.1\|	4.2e-97	86.5	hypothetical protein BVRB_5g11...	[more]
gi\|733214909\|ref\|NP_001289996.1\|	4.2e-97	86.5	elongation factor 1-delta [Bet...	[more]
gi\|951068895\|ref\|XP_014489939.1\|	6.9e-92	81.3	PREDICTED: elongation factor 1...	[more]

BLAST of Spo25393.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R9I2_SPIOL	2.7e-111	96.9	Uncharacterized protein OS=Spi...	[more]
A0A0K9RQJ0_SPIOL	7.9e-103	90.0	Uncharacterized protein OS=Spi...	[more]
A0A0J8CGQ0_BETVU	2.9e-97	86.5	Uncharacterized protein OS=Bet...	[more]
E1CKY6_VIGUN	8.2e-92	81.3	Elongation factor 1 beta OS=Vi...	[more]
A0A0S3RFU3_PHAAN	2.4e-91	81.4	Uncharacterized protein OS=Vig...	[more]

BLAST of Spo25393.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
EF1D_BETVU	2.6e-99	86.5	Elongation factor 1-delta OS=B...	[more]
EF1D_PIMBR	6.1e-88	76.5	Elongation factor 1-delta OS=P...	[more]
EF1D1_ARATH	2.5e-86	75.4	Elongation factor 1-delta 1 OS...	[more]
EF1D2_ARATH	1.8e-84	74.1	Elongation factor 1-delta 2 OS...	[more]
EF1D1_ORYSJ	3.6e-80	71.7	Elongation factor 1-delta 1 OS...	[more]

BLAST of Spo25393.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G30230.2	1.4e-87	75.4	Glutathione S-transferase, C-t...	[more]
AT2G18110.1	1.0e-85	74.1	Translation elongation factor...	[more]
AT5G19510.1	5.9e-65	61.3	Translation elongation factor...	[more]
AT5G12110.1	2.1e-62	60.6	Glutathione S-transferase, C-t...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001326	Translation elongation factor EF1B, beta/delta chains, conserved site	PROSITE	PS00824	EF1BD_1	coord: 105..113 scor
IPR001326	Translation elongation factor EF1B, beta/delta chains, conserved site	PROSITE	PS00825	EF1BD_2	coord: 213..224 scor
IPR010987	Glutathione S-transferase, C-terminal-like	unknown	SSF47616	GST C-terminal domain-like	coord: 12..67 score: 1.68
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	PFAM	PF00736	EF1_GNE	coord: 143..224 score: 5.4
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	SMART	SM00888	EF1_GNE_2	coord: 141..224 score: 9.5
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	unknown	SSF54984	eEF-1beta-like	coord: 138..224 score: 2.62
IPR014717	Translation elongation factor EF1B/ribosomal protein S6	GENE3D	3.30.70.60		coord: 135..224 score: 9.0
None	No IPR available	unknown	Coil	Coil	coord: 113..133 scor
None	No IPR available	PANTHER	PTHR11595	ELONGATION FACTOR 1-BETA	coord: 1..224 score: 3.7E
None	No IPR available	PANTHER	PTHR11595:SF27	SUBFAMILY NOT NAMED	coord: 1..224 score: 3.7E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0016132	brassinosteroid biosynthetic process
biological_process	GO:0006414	translational elongation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0032259	methylation
biological_process	GO:0006084	acetyl-CoA metabolic process
cellular_component	GO:0005840	ribosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005853	eukaryotic translation elongation factor 1 complex
molecular_function	GO:0030797	24-methylenesterol C-methyltransferase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0019904	protein domain specific binding
molecular_function	GO:0003746	translation elongation factor activity
molecular_function	GO:0003838	sterol 24-C-methyltransferase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo08334	0.72	Barchart \| Table
Spo24106	0.70	Barchart \| Table
Spo00257	0.67	Barchart \| Table
Spo12152	0.66	Barchart \| Table
Spo21768	0.66	Barchart \| Table