Spo25370 (gene)

Overview
NameSpo25370
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr1 : 23634645 .. 23636195 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGATTCTCCCCGCATCTCCGCCGTCTTCTCCACCTCCGCCACTTCTCCACTCCATCATTTCGCCCTCCTCCACCCTCTCTCACTGCCCTAAAACCCCATTTCACACCCCCATCAAAACCCCACCACCTCCCTTCACTCCTCCCTTTTCCCCTCAGATCGTTCACCACCCAACCTTCTCAAACGTCCCAGGACAATGACCAAATTTCCCTTTCTCTCTCCTCCGAACTCCTTAAACCCTCCGACCAACCCGACTCCCTCTCCCTCTCGCAACGCTTAGACCTCTCATTCTCTCACATTACTCTCTCTCCTTCCCTGATTCTTCAAACGCTCAACAAATCATCCGACGCCGGTCGCAATGCTTTCGATTTCTTCAAATGGGTATCCTCTAAATCCCCCGATTTCCAGCTCACTGATGAGGTATACTCTTTATTCGTTGATTATTTTGGTCGTAGGAAGGATTTTAAGATCATTCATGATATTCTTGTTGGTGGGAAAGGTGTCATTGGGTCTAAAACTTTCGCTGCGTCGATCGACCGCCTCGTTCGAGCCGGTAGAGCGACGCAGGCAGTCTCGTTTTTTGATAGGATGGAGAATGAATACGGCATAGTTAGGGATAGGAAATCGTTAGATTATATTGTTACTAAACTTTGTGAACACAAGTATCCTAATTATGCTGAGAAAATGGTTAAGAACCTTGCTAATGAGTTTTTCCCTAATGAGTATGTGTGTGATGTGTTGATCAAAGGGTGGTGTGTTGATGGGAAACTTGAGGAGGCTAGAAGGTTAGCCAGGGAGATGTACAGGGGTGGGTTCGAGCTAGGAACAGTGGCTTATAATTCAATCCTTAATTGTATTTGTAAGCTTTGTAGGGAGAAGGACCCTTCTCGGCTTCAGTCTGAAGCTGATGATGTTTTAGTTGATATGGATGCGGCTGGTGTGCCGCGAAACACTGAGACCTTTAATGTGCTGTTGTCGAATTTGTGTAAGATTCGTAAAACTGAGGATGCTATGAAGTTGTTTCATAGGATGGGTGAGTGGGGGTGCTACCCTAATGCCACCACGTTTCTTATACTCACTAGGAGTTTGTATCAGGCTGCTAGGATTGGGGAGGGAGATGAGATGATTGATAGGATGAAATCAGCTGGATTTGGTGATTCTCTTGATAAAAAGGCTTACTTTGGTTTTTTGAAGATCCTTTGTGGAATTGAGAGGATTAATCCTGCTTTAAATGTGTTTGCTAAGATGAAAGCGGATGGATGTAAACCGGGGGTCCAGACTTATGACTTATTGGTTAGAAAGTTGTATGCTCATGGTCGTGTTGAAAAGGCTAAGGCTCTTTTCAGTGAAGCTGTTTGTAATGAGGTTCCAGTCCAGTCTAAGGATTATAAGGTAGATCCTAGATTTGTAAAGAAGACGAAGGTTGTCAAGAAGAAGGGTAAGAAGCGGCTCACATTGCCTGAGAAGACGGTGTTGAAAAGGAAAAACCTCAGGAAGCACAATTTGAGTTTTGTAAAGAAGCCAAAAAAGATGATGCAGAGGATGCAATGA

mRNA sequence

ATGCGATTCTCCCCGCATCTCCGCCGTCTTCTCCACCTCCGCCACTTCTCCACTCCATCATTTCGCCCTCCTCCACCCTCTCTCACTGCCCTAAAACCCCATTTCACACCCCCATCAAAACCCCACCACCTCCCTTCACTCCTCCCTTTTCCCCTCAGATCGTTCACCACCCAACCTTCTCAAACGTCCCAGGACAATGACCAAATTTCCCTTTCTCTCTCCTCCGAACTCCTTAAACCCTCCGACCAACCCGACTCCCTCTCCCTCTCGCAACGCTTAGACCTCTCATTCTCTCACATTACTCTCTCTCCTTCCCTGATTCTTCAAACGCTCAACAAATCATCCGACGCCGGTCGCAATGCTTTCGATTTCTTCAAATGGGTATCCTCTAAATCCCCCGATTTCCAGCTCACTGATGAGGTATACTCTTTATTCGTTGATTATTTTGGTCGTAGGAAGGATTTTAAGATCATTCATGATATTCTTGTTGGTGGGAAAGGTGTCATTGGGTCTAAAACTTTCGCTGCGTCGATCGACCGCCTCGTTCGAGCCGGTAGAGCGACGCAGGCAGTCTCGTTTTTTGATAGGATGGAGAATGAATACGGCATAGTTAGGGATAGGAAATCGTTAGATTATATTGTTACTAAACTTTGTGAACACAAGTATCCTAATTATGCTGAGAAAATGGTTAAGAACCTTGCTAATGAGTTTTTCCCTAATGAGTATGTGTGTGATGTGTTGATCAAAGGGTGGTGTGTTGATGGGAAACTTGAGGAGGCTAGAAGGTTAGCCAGGGAGATGTACAGGGGTGGGTTCGAGCTAGGAACAGTGGCTTATAATTCAATCCTTAATTGTATTTGTAAGCTTTGTAGGGAGAAGGACCCTTCTCGGCTTCAGTCTGAAGCTGATGATGTTTTAGTTGATATGGATGCGGCTGGTGTGCCGCGAAACACTGAGACCTTTAATGTGCTGTTGTCGAATTTGTGTAAGATTCGTAAAACTGAGGATGCTATGAAGTTGTTTCATAGGATGGGTGAGTGGGGGTGCTACCCTAATGCCACCACGTTTCTTATACTCACTAGGAGTTTGTATCAGGCTGCTAGGATTGGGGAGGGAGATGAGATGATTGATAGGATGAAATCAGCTGGATTTGGTGATTCTCTTGATAAAAAGGCTTACTTTGGTTTTTTGAAGATCCTTTGTGGAATTGAGAGGATTAATCCTGCTTTAAATGTGTTTGCTAAGATGAAAGCGGATGGATGTAAACCGGGGGTCCAGACTTATGACTTATTGGTTAGAAAGTTGTATGCTCATGGTCGTGTTGAAAAGGCTAAGGCTCTTTTCAGTGAAGCTGTTTGTAATGAGGTTCCAGTCCAGTCTAAGGATTATAAGGTAGATCCTAGATTTGTAAAGAAGACGAAGGTTGTCAAGAAGAAGGGTAAGAAGCGGCTCACATTGCCTGAGAAGACGGTGTTGAAAAGGAAAAACCTCAGGAAGCACAATTTGAGTTTTGTAAAGAAGCCAAAAAAGATGATGCAGAGGATGCAATGA

Coding sequence (CDS)

ATGCGATTCTCCCCGCATCTCCGCCGTCTTCTCCACCTCCGCCACTTCTCCACTCCATCATTTCGCCCTCCTCCACCCTCTCTCACTGCCCTAAAACCCCATTTCACACCCCCATCAAAACCCCACCACCTCCCTTCACTCCTCCCTTTTCCCCTCAGATCGTTCACCACCCAACCTTCTCAAACGTCCCAGGACAATGACCAAATTTCCCTTTCTCTCTCCTCCGAACTCCTTAAACCCTCCGACCAACCCGACTCCCTCTCCCTCTCGCAACGCTTAGACCTCTCATTCTCTCACATTACTCTCTCTCCTTCCCTGATTCTTCAAACGCTCAACAAATCATCCGACGCCGGTCGCAATGCTTTCGATTTCTTCAAATGGGTATCCTCTAAATCCCCCGATTTCCAGCTCACTGATGAGGTATACTCTTTATTCGTTGATTATTTTGGTCGTAGGAAGGATTTTAAGATCATTCATGATATTCTTGTTGGTGGGAAAGGTGTCATTGGGTCTAAAACTTTCGCTGCGTCGATCGACCGCCTCGTTCGAGCCGGTAGAGCGACGCAGGCAGTCTCGTTTTTTGATAGGATGGAGAATGAATACGGCATAGTTAGGGATAGGAAATCGTTAGATTATATTGTTACTAAACTTTGTGAACACAAGTATCCTAATTATGCTGAGAAAATGGTTAAGAACCTTGCTAATGAGTTTTTCCCTAATGAGTATGTGTGTGATGTGTTGATCAAAGGGTGGTGTGTTGATGGGAAACTTGAGGAGGCTAGAAGGTTAGCCAGGGAGATGTACAGGGGTGGGTTCGAGCTAGGAACAGTGGCTTATAATTCAATCCTTAATTGTATTTGTAAGCTTTGTAGGGAGAAGGACCCTTCTCGGCTTCAGTCTGAAGCTGATGATGTTTTAGTTGATATGGATGCGGCTGGTGTGCCGCGAAACACTGAGACCTTTAATGTGCTGTTGTCGAATTTGTGTAAGATTCGTAAAACTGAGGATGCTATGAAGTTGTTTCATAGGATGGGTGAGTGGGGGTGCTACCCTAATGCCACCACGTTTCTTATACTCACTAGGAGTTTGTATCAGGCTGCTAGGATTGGGGAGGGAGATGAGATGATTGATAGGATGAAATCAGCTGGATTTGGTGATTCTCTTGATAAAAAGGCTTACTTTGGTTTTTTGAAGATCCTTTGTGGAATTGAGAGGATTAATCCTGCTTTAAATGTGTTTGCTAAGATGAAAGCGGATGGATGTAAACCGGGGGTCCAGACTTATGACTTATTGGTTAGAAAGTTGTATGCTCATGGTCGTGTTGAAAAGGCTAAGGCTCTTTTCAGTGAAGCTGTTTGTAATGAGGTTCCAGTCCAGTCTAAGGATTATAAGGTAGATCCTAGATTTGTAAAGAAGACGAAGGTTGTCAAGAAGAAGGGTAAGAAGCGGCTCACATTGCCTGAGAAGACGGTGTTGAAAAGGAAAAACCTCAGGAAGCACAATTTGAGTTTTGTAAAGAAGCCAAAAAAGATGATGCAGAGGATGCAATGA

Protein sequence

MRFSPHLRRLLHLRHFSTPSFRPPPPSLTALKPHFTPPSKPHHLPSLLPFPLRSFTTQPSQTSQDNDQISLSLSSELLKPSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKSSDAGRNAFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTFAASIDRLVRAGRATQAVSFFDRMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPNEYVCDVLIKGWCVDGKLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRLQSEADDVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILTRSLYQAARIGEGDEMIDRMKSAGFGDSLDKKAYFGFLKILCGIERINPALNVFAKMKADGCKPGVQTYDLLVRKLYAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFVKKTKVVKKKGKKRLTLPEKTVLKRKNLRKHNLSFVKKPKKMMQRMQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo25370.1Spo25370.1mRNA


Homology
BLAST of Spo25370.1 vs. NCBI nr
Match: gi|902227822|gb|KNA20846.1| (hypothetical protein SOVF_048540 [Spinacia oleracea])

HSP 1 Score: 1024.2 bits (2647), Expect = 7.700e-296
Identity = 515/516 (99.81%), Postives = 515/516 (99.81%), Query Frame = 1

		  

Query: 1   MRFSPHLRRLLHLRHFSTPSFRPPPPSLTALKPHFTPPSKPHHLPSLLPFPLRSFTTQPS 60
           MRFSPHLRRLLHLRHFSTPSFRPPPPSLTALKPHFTPPSKPHHLPSLLPFPLRSFTTQPS
Sbjct: 1   MRFSPHLRRLLHLRHFSTPSFRPPPPSLTALKPHFTPPSKPHHLPSLLPFPLRSFTTQPS 60

Query: 61  QTSQDNDQISLSLSSELLKPSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKSSDAGRN 120
           QTSQDNDQISLSLSSELLKPSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKSSDAGRN
Sbjct: 61  QTSQDNDQISLSLSSELLKPSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKSSDAGRN 120

Query: 121 AFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTFAASIDR 180
           AFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTFAASIDR
Sbjct: 121 AFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTFAASIDR 180

Query: 181 LVRAGRATQAVSFFDRMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPN 240
           LVRAGRATQAVSFFDRMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPN
Sbjct: 181 LVRAGRATQAVSFFDRMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPN 240

Query: 241 EYVCDVLIKGWCVDGKLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRLQS 300
           EYVCDVLIKGWCVDGKLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRLQS
Sbjct: 241 EYVCDVLIKGWCVDGKLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRLQS 300

Query: 301 EADDVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILT 360
           EADDVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILT
Sbjct: 301 EADDVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILT 360

Query: 361 RSLYQAARIGEGDEMIDRMKSAGFGDSLDKKAYFGFLKILCGIERINPALNVFAKMKADG 420
           RSLYQAARIGEGDEMIDRMKSAGFGD LDKKAYFGFLKILCGIERINPALNVFAKMKADG
Sbjct: 361 RSLYQAARIGEGDEMIDRMKSAGFGDCLDKKAYFGFLKILCGIERINPALNVFAKMKADG 420

Query: 421 CKPGVQTYDLLVRKLYAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFVKKTKVVKKKG 480
           CKPGVQTYDLLVRKLYAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFVKKTKVVKKKG
Sbjct: 421 CKPGVQTYDLLVRKLYAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFVKKTKVVKKKG 480

Query: 481 KKRLTLPEKTVLKRKNLRKHNLSFVKKPKKMMQRMQ 517
           KKRLTLPEKTVLKRKNLRKHNLSFVKKPKKMMQRMQ
Sbjct: 481 KKRLTLPEKTVLKRKNLRKHNLSFVKKPKKMMQRMQ 516

BLAST of Spo25370.1 vs. NCBI nr
Match: gi|731367388|ref|XP_010695584.1| (PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 816.2 bits (2107), Expect = 3.200e-233
Identity = 414/515 (80.39%), Postives = 460/515 (89.32%), Query Frame = 1

		  

Query: 1   MRFSPHLRRLLHLRHFSTPSFRPPPPSLTALKPHFTPPSKPHHLPSLLPFPLRSFTTQPS 60
           MR SPHLRRLL LRH S+P    P PSLT+LKPHF+  +KP++LP  L   LRSF++ PS
Sbjct: 1   MRISPHLRRLLLLRHLSSPPHHLPSPSLTSLKPHFSTLTKPYNLPIFLSPLLRSFSSNPS 60

Query: 61  QTSQDNDQISLSLSSELLKPSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKSSDAGRN 120
             +QDN Q +LSLSSELL  S+ PDSLSLSQRLDLSFSHITLSP+LILQTLN S  A R+
Sbjct: 61  NPTQDNYQTALSLSSELLTLSETPDSLSLSQRLDLSFSHITLSPNLILQTLNNSPHAARS 120

Query: 121 AFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTFAASIDR 180
           AFDFFKWVSSKSP FQLTDEV S FVDYFGRRKDFKIIHD+LVGG GVIG KTFA+SIDR
Sbjct: 121 AFDFFKWVSSKSPQFQLTDEVLSFFVDYFGRRKDFKIIHDVLVGGNGVIGFKTFASSIDR 180

Query: 181 LVRAGRATQAVSFFDRMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPN 240
           LVRAGRATQAVSFFDRME +YGIVRDR+  +YIV+KLCEH Y NYAEK+VKN+ANEFFP+
Sbjct: 181 LVRAGRATQAVSFFDRMEKDYGIVRDREKFNYIVSKLCEHGYANYAEKLVKNVANEFFPD 240

Query: 241 EYVCDVLIKGWCVDGKLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRLQS 300
           EYVCDVLI+GWCVDGKLEEARRLAREMYRGGFELGTVA+NSIL+CICKLCR+KDPSRLQ+
Sbjct: 241 EYVCDVLIRGWCVDGKLEEARRLAREMYRGGFELGTVAFNSILDCICKLCRKKDPSRLQA 300

Query: 301 EADDVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILT 360
           EA  VLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDA+KLF RMGEWGC+P+ATTFL+L 
Sbjct: 301 EAQTVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAVKLFSRMGEWGCHPDATTFLVLI 360

Query: 361 RSLYQAARIGEGDEMIDRMKSAGFGDSLDKKAYFGFLKILCGIERINPALNVFAKMKADG 420
           RSLYQA R+GEGDEMIDRM+SAG+GD+LDKKAY+GFLKILCGIERI  A +VFAKMKADG
Sbjct: 361 RSLYQAGRVGEGDEMIDRMRSAGYGDALDKKAYYGFLKILCGIERIEHASSVFAKMKADG 420

Query: 421 CKPGVQTYDLLVRKLYAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFVKKTKVVKKKG 480
           CKPGV+TYDLL+ K YAHGRVEKAKAL SEAV N VP+++K+YK+D RF+KK KVV KKG
Sbjct: 421 CKPGVKTYDLLIGKWYAHGRVEKAKALSSEAVRNNVPIEAKEYKLDTRFMKKPKVV-KKG 480

Query: 481 KKRLTLPEKTVLKRKNLRKHNLSFVKKPKKMMQRM 516
           KKRLTLPEKTVLKRK LRKHNLSFVKKP+K MQRM
Sbjct: 481 KKRLTLPEKTVLKRKTLRKHNLSFVKKPRKTMQRM 514

BLAST of Spo25370.1 vs. NCBI nr
Match: gi|731426036|ref|XP_010663464.1| (PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Vitis vinifera])

HSP 1 Score: 643.7 bits (1659), Expect = 2.800e-181
Identity = 332/496 (66.94%), Postives = 401/496 (80.85%), Query Frame = 1

		  

Query: 18  TPSFRPPPPSLTALKPHFTPPSKPHHLPSLLPFPL-RSFTTQPSQTSQDN-DQISLSLSS 77
           +P+    P  L + + HF  PS          FPL R F++QP+ ++ D+  QI+ SLSS
Sbjct: 46  SPTLSLDPYCLCSSQRHFVSPS----------FPLSRRFSSQPNNSADDDHSQIAQSLSS 105

Query: 78  ELLKPSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKSSDAGRNAFDFFKWVSSKSPDF 137
           ELLK  D  + + + QRL LSFSHIT SP LILQTLN S DAGR    F+KW+SS +P F
Sbjct: 106 ELLKDPDS-EPVPIIQRLQLSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLSS-NPKF 165

Query: 138 QLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTFAASIDRLVRAGRATQAVSFFD 197
             +DE  S FVDYFGRRKDFK IH++L+ G+   G+KT  ++IDRLVRAGRATQ VSFFD
Sbjct: 166 VHSDETISFFVDYFGRRKDFKAIHEVLMDGRNFAGAKTLESAIDRLVRAGRATQVVSFFD 225

Query: 198 RMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPNEYVCDVLIKGWCVDG 257
           RME +YG  RDR+SL  +V+KLCEH + ++AEK+VKN+ANE FPNE +CD+LIKGWCVDG
Sbjct: 226 RMEVDYGFRRDRESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVDG 285

Query: 258 KLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRLQSEADDVLVDMDAAGVP 317
           KL+EARRLA EM+RGGFE+GT+AYNSIL+CICKLCR+KDP RL+SEA+ +LVDMD AGVP
Sbjct: 286 KLDEARRLAEEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGVP 345

Query: 318 RNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILTRSLYQAARIGEGDEM 377
           RN ETFNVL++NLCKIRKTEDAMKLF+RMGEWGCYPN TTFL+LTRSLYQAAR+GEGDEM
Sbjct: 346 RNVETFNVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEM 405

Query: 378 IDRMKSAGFGDSLDKKAYFGFLKILCGIERINPALNVFAKMKADGCKPGVQTYDLLVRKL 437
           IDRMKSAGFG++LDKKAY+ F+KILCGIERI+ A+++F+KMK DGCKPG++TYDLL+ KL
Sbjct: 406 IDRMKSAGFGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKL 465

Query: 438 YAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFVKKTKVVKKKGKKRLTLPEKTVLKRK 497
            AHGR++KA ALFSEAV   VPV+SK YK+DPRFVKK  V KK+ KKR TLPEK   KR+
Sbjct: 466 CAHGRLDKANALFSEAVNRGVPVESKAYKLDPRFVKKPTVAKKE-KKRETLPEKMARKRR 525

Query: 498 NLRKHNLSFVKKPKKM 512
            LRK  LSFVKKPK+M
Sbjct: 526 RLRKIRLSFVKKPKRM 528

BLAST of Spo25370.1 vs. NCBI nr
Match: gi|976912826|gb|KVH99290.1| (Pentatricopeptide repeat-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 623.2 bits (1606), Expect = 4.000e-175
Identity = 334/520 (64.23%), Postives = 400/520 (76.92%), Query Frame = 1

		  

Query: 7   LRRLLHLRHFSTPSFRPPPPSLTALKPH--FTPPSKPHHLPS----LLPFPLR-----SF 66
           LR LL  R+FS+P   PPPP L ++  H  F  P KP  +P      +PF L      S 
Sbjct: 13  LRILLRRRYFSSPP--PPPPPLQSIYRHQRFLNPQKPS-IPKPYSLFIPFSLSFSKFFSS 72

Query: 67  TTQPSQTSQDNDQISLSLSSELLK-PSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKS 126
            TQ   + QD+  I+ +LS ELLK P+DQ  SL L+QRLDLSFSHITL+ +LIL TLN S
Sbjct: 73  QTQIETSLQDSLDIAQTLSYELLKDPNDQ--SLPLNQRLDLSFSHITLTSTLILNTLNLS 132

Query: 127 SDAGRNAFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTF 186
           S +GR A DF KWVS ++ DF LTDE  + F+DYFGRR DFK  H++LV  KGV G KTF
Sbjct: 133 SKSGRTALDFHKWVSERT-DFNLTDESLAHFIDYFGRRNDFKATHEVLVASKGVSGVKTF 192

Query: 187 AASIDRLVRAGRATQAVSFFDRMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLA 246
            +SIDRLVRAGR TQ V+FFD+ME++YG VR+  SL  IV+KLCEH + +YAEKMV N+A
Sbjct: 193 ESSIDRLVRAGRPTQVVAFFDKMESDYGFVRNMDSLKLIVSKLCEHGFASYAEKMVTNVA 252

Query: 247 NEFFPNEYVCDVLIKGWCVDGKLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKD 306
           NEFFP+E++CD LIKGWCVDGKL+EARRL++EMYRGGFE+G VAYN+IL+C+CKLCR+KD
Sbjct: 253 NEFFPDEFICDTLIKGWCVDGKLDEARRLSQEMYRGGFEIGPVAYNAILDCVCKLCRKKD 312

Query: 307 PSRLQSEADDVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNAT 366
           P RLQSEA+ VL+DMD AGVPRN ETFNVL++NLCKIRKTE+AM LF RMGEWGC+PN  
Sbjct: 313 PFRLQSEAEKVLIDMDVAGVPRNVETFNVLITNLCKIRKTEEAMNLFDRMGEWGCHPNEE 372

Query: 367 TFLILTRSLYQAARIGEGDEMIDRMKSAGFGDSLDKKAYFGFLKILCGIERINPALNVFA 426
           TFLIL +SLYQAARIGEGDEMIDRMKSAGFG +L+KK Y+ FLKILCGIERI+ AL VF 
Sbjct: 373 TFLILIKSLYQAARIGEGDEMIDRMKSAGFGGALNKKVYYEFLKILCGIERIDHALTVFV 432

Query: 427 KMKADGCKPGVQTYDLLVRKLYAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFVKKTK 486
           KMK DGC+PG++TYDLL+ KL  HGRV+KA  LF EA    + V+ K YK+DPRF+KK  
Sbjct: 433 KMKKDGCEPGIKTYDLLMGKLCGHGRVDKANLLFKEAEKRGLAVEPKAYKLDPRFIKKPA 492

Query: 487 VVKKKGKKRLTLPEKTVLKRKNLRKHNLSFVKKPKKMMQR 515
            VK+  KKR TLPEK   KR+ L+K  LSFVKKPKK  +R
Sbjct: 493 AVKE--KKRETLPEKMARKRRRLKKIRLSFVKKPKKAQRR 524

BLAST of Spo25370.1 vs. NCBI nr
Match: gi|719966986|ref|XP_010260497.1| (PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Nelumbo nucifera])

HSP 1 Score: 621.3 bits (1601), Expect = 1.500e-174
Identity = 323/501 (64.47%), Postives = 394/501 (78.64%), Query Frame = 1

		  

Query: 23  PPPP-----SLTALKPHFTPPSKPHHLPSLLPFPLRSFTTQP---SQTSQDNDQISLSLS 82
           PP P     S ++L+ H  P + P H   L P   R+F+++P    +  Q+ +QI+ S+S
Sbjct: 35  PPSPVLVQSSFSSLQYHRHPSTPPSH--PLFPSS-RAFSSRPRFRGKDVQNLEQIAQSIS 94

Query: 83  SELLKPSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKSSDAGRNAFDFFKWVSSKSPD 142
            ELLK ++  +S+SL QRL L FSHI  +P LILQ LN+S DAGR+  DF +WVSS+ P 
Sbjct: 95  EELLKDANA-ESISLKQRLHLHFSHIRPTPELILQVLNRSPDAGRSVLDFHQWVSSQ-PG 154

Query: 143 FQLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTFAASIDRLVRAGRATQAVSFF 202
           F+  DE +S  VDY GRRKDFK IHD+LV G+GV G KT A+SIDRLVRAGR TQAV+FF
Sbjct: 155 FKHDDETFSYLVDYLGRRKDFKAIHDVLVDGRGVTGRKTLASSIDRLVRAGRDTQAVAFF 214

Query: 203 DRMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPNEYVCDVLIKGWCVD 262
           ++ME +Y  VRDR+SL  +V+ LCEH Y   AEKMVKNLA+EFFP+E +CD+LIKGWC D
Sbjct: 215 EKMEKDYNFVRDRESLKMVVSALCEHGYAGSAEKMVKNLAHEFFPDESICDLLIKGWCSD 274

Query: 263 GKLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRLQSEADDVLVDMDAAGV 322
           GKL+EARRLA EMYRGGFELG +AYNSIL+C+CKLCR KDP  LQSEA+ +L+DMD AGV
Sbjct: 275 GKLDEARRLAGEMYRGGFELGVMAYNSILDCVCKLCRRKDPFSLQSEAEKILMDMDVAGV 334

Query: 323 PRNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILTRSLYQAARIGEGDE 382
           PRN ETFNVL+SNLCKIRKTEDA+KLF RMGEWGCYP++TTFL+LTRS+YQAARIGEGDE
Sbjct: 335 PRNVETFNVLISNLCKIRKTEDALKLFERMGEWGCYPDSTTFLVLTRSVYQAARIGEGDE 394

Query: 383 MIDRMKSAGFGDSLDKKAYFGFLKILCGIERINPALNVFAKMKADGCKPGVQTYDLLVRK 442
           MIDRMKSAGFGD+LDKKAY+GFLKILCGIER+  A+ VFA+MK DGC+PG++TYDLL+ K
Sbjct: 395 MIDRMKSAGFGDALDKKAYYGFLKILCGIERVEHAMKVFARMKKDGCQPGIKTYDLLMEK 454

Query: 443 LYAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFVKKTKVVKKKGK-KRLTLPEKTVLK 502
           L AHG+V++A AL+ EA    +P+  K YK+DPRF KK   VK+  K KR TLPEK   K
Sbjct: 455 LCAHGQVDRANALYREATKRGLPMTPKVYKLDPRFAKKKPKVKRSEKPKRETLPEKMARK 514

Query: 503 RKNLRKHNLSFVKKPKKMMQR 515
           R+ LRK  LSFVKKPK+MM+R
Sbjct: 515 RRRLRKLRLSFVKKPKRMMRR 530

BLAST of Spo25370.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMU1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_048540 PE=4 SV=1)

HSP 1 Score: 1024.2 bits (2647), Expect = 5.400e-296
Identity = 515/516 (99.81%), Postives = 515/516 (99.81%), Query Frame = 1

		  

Query: 1   MRFSPHLRRLLHLRHFSTPSFRPPPPSLTALKPHFTPPSKPHHLPSLLPFPLRSFTTQPS 60
           MRFSPHLRRLLHLRHFSTPSFRPPPPSLTALKPHFTPPSKPHHLPSLLPFPLRSFTTQPS
Sbjct: 1   MRFSPHLRRLLHLRHFSTPSFRPPPPSLTALKPHFTPPSKPHHLPSLLPFPLRSFTTQPS 60

Query: 61  QTSQDNDQISLSLSSELLKPSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKSSDAGRN 120
           QTSQDNDQISLSLSSELLKPSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKSSDAGRN
Sbjct: 61  QTSQDNDQISLSLSSELLKPSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKSSDAGRN 120

Query: 121 AFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTFAASIDR 180
           AFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTFAASIDR
Sbjct: 121 AFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTFAASIDR 180

Query: 181 LVRAGRATQAVSFFDRMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPN 240
           LVRAGRATQAVSFFDRMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPN
Sbjct: 181 LVRAGRATQAVSFFDRMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPN 240

Query: 241 EYVCDVLIKGWCVDGKLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRLQS 300
           EYVCDVLIKGWCVDGKLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRLQS
Sbjct: 241 EYVCDVLIKGWCVDGKLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRLQS 300

Query: 301 EADDVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILT 360
           EADDVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILT
Sbjct: 301 EADDVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILT 360

Query: 361 RSLYQAARIGEGDEMIDRMKSAGFGDSLDKKAYFGFLKILCGIERINPALNVFAKMKADG 420
           RSLYQAARIGEGDEMIDRMKSAGFGD LDKKAYFGFLKILCGIERINPALNVFAKMKADG
Sbjct: 361 RSLYQAARIGEGDEMIDRMKSAGFGDCLDKKAYFGFLKILCGIERINPALNVFAKMKADG 420

Query: 421 CKPGVQTYDLLVRKLYAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFVKKTKVVKKKG 480
           CKPGVQTYDLLVRKLYAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFVKKTKVVKKKG
Sbjct: 421 CKPGVQTYDLLVRKLYAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFVKKTKVVKKKG 480

Query: 481 KKRLTLPEKTVLKRKNLRKHNLSFVKKPKKMMQRMQ 517
           KKRLTLPEKTVLKRKNLRKHNLSFVKKPKKMMQRMQ
Sbjct: 481 KKRLTLPEKTVLKRKNLRKHNLSFVKKPKKMMQRMQ 516

BLAST of Spo25370.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BC87_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g125810 PE=4 SV=1)

HSP 1 Score: 816.2 bits (2107), Expect = 2.200e-233
Identity = 414/515 (80.39%), Postives = 460/515 (89.32%), Query Frame = 1

		  

Query: 1   MRFSPHLRRLLHLRHFSTPSFRPPPPSLTALKPHFTPPSKPHHLPSLLPFPLRSFTTQPS 60
           MR SPHLRRLL LRH S+P    P PSLT+LKPHF+  +KP++LP  L   LRSF++ PS
Sbjct: 1   MRISPHLRRLLLLRHLSSPPHHLPSPSLTSLKPHFSTLTKPYNLPIFLSPLLRSFSSNPS 60

Query: 61  QTSQDNDQISLSLSSELLKPSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKSSDAGRN 120
             +QDN Q +LSLSSELL  S+ PDSLSLSQRLDLSFSHITLSP+LILQTLN S  A R+
Sbjct: 61  NPTQDNYQTALSLSSELLTLSETPDSLSLSQRLDLSFSHITLSPNLILQTLNNSPHAARS 120

Query: 121 AFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTFAASIDR 180
           AFDFFKWVSSKSP FQLTDEV S FVDYFGRRKDFKIIHD+LVGG GVIG KTFA+SIDR
Sbjct: 121 AFDFFKWVSSKSPQFQLTDEVLSFFVDYFGRRKDFKIIHDVLVGGNGVIGFKTFASSIDR 180

Query: 181 LVRAGRATQAVSFFDRMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPN 240
           LVRAGRATQAVSFFDRME +YGIVRDR+  +YIV+KLCEH Y NYAEK+VKN+ANEFFP+
Sbjct: 181 LVRAGRATQAVSFFDRMEKDYGIVRDREKFNYIVSKLCEHGYANYAEKLVKNVANEFFPD 240

Query: 241 EYVCDVLIKGWCVDGKLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRLQS 300
           EYVCDVLI+GWCVDGKLEEARRLAREMYRGGFELGTVA+NSIL+CICKLCR+KDPSRLQ+
Sbjct: 241 EYVCDVLIRGWCVDGKLEEARRLAREMYRGGFELGTVAFNSILDCICKLCRKKDPSRLQA 300

Query: 301 EADDVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILT 360
           EA  VLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDA+KLF RMGEWGC+P+ATTFL+L 
Sbjct: 301 EAQTVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAVKLFSRMGEWGCHPDATTFLVLI 360

Query: 361 RSLYQAARIGEGDEMIDRMKSAGFGDSLDKKAYFGFLKILCGIERINPALNVFAKMKADG 420
           RSLYQA R+GEGDEMIDRM+SAG+GD+LDKKAY+GFLKILCGIERI  A +VFAKMKADG
Sbjct: 361 RSLYQAGRVGEGDEMIDRMRSAGYGDALDKKAYYGFLKILCGIERIEHASSVFAKMKADG 420

Query: 421 CKPGVQTYDLLVRKLYAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFVKKTKVVKKKG 480
           CKPGV+TYDLL+ K YAHGRVEKAKAL SEAV N VP+++K+YK+D RF+KK KVV KKG
Sbjct: 421 CKPGVKTYDLLIGKWYAHGRVEKAKALSSEAVRNNVPIEAKEYKLDTRFMKKPKVV-KKG 480

Query: 481 KKRLTLPEKTVLKRKNLRKHNLSFVKKPKKMMQRM 516
           KKRLTLPEKTVLKRK LRKHNLSFVKKP+K MQRM
Sbjct: 481 KKRLTLPEKTVLKRKTLRKHNLSFVKKPRKTMQRM 514

BLAST of Spo25370.1 vs. UniProtKB/TrEMBL
Match: D7SIL7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g05090 PE=4 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 2.000e-181
Identity = 332/496 (66.94%), Postives = 401/496 (80.85%), Query Frame = 1

		  

Query: 18  TPSFRPPPPSLTALKPHFTPPSKPHHLPSLLPFPL-RSFTTQPSQTSQDN-DQISLSLSS 77
           +P+    P  L + + HF  PS          FPL R F++QP+ ++ D+  QI+ SLSS
Sbjct: 46  SPTLSLDPYCLCSSQRHFVSPS----------FPLSRRFSSQPNNSADDDHSQIAQSLSS 105

Query: 78  ELLKPSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKSSDAGRNAFDFFKWVSSKSPDF 137
           ELLK  D  + + + QRL LSFSHIT SP LILQTLN S DAGR    F+KW+SS +P F
Sbjct: 106 ELLKDPDS-EPVPIIQRLQLSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLSS-NPKF 165

Query: 138 QLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTFAASIDRLVRAGRATQAVSFFD 197
             +DE  S FVDYFGRRKDFK IH++L+ G+   G+KT  ++IDRLVRAGRATQ VSFFD
Sbjct: 166 VHSDETISFFVDYFGRRKDFKAIHEVLMDGRNFAGAKTLESAIDRLVRAGRATQVVSFFD 225

Query: 198 RMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPNEYVCDVLIKGWCVDG 257
           RME +YG  RDR+SL  +V+KLCEH + ++AEK+VKN+ANE FPNE +CD+LIKGWCVDG
Sbjct: 226 RMEVDYGFRRDRESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVDG 285

Query: 258 KLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRLQSEADDVLVDMDAAGVP 317
           KL+EARRLA EM+RGGFE+GT+AYNSIL+CICKLCR+KDP RL+SEA+ +LVDMD AGVP
Sbjct: 286 KLDEARRLAEEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGVP 345

Query: 318 RNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILTRSLYQAARIGEGDEM 377
           RN ETFNVL++NLCKIRKTEDAMKLF+RMGEWGCYPN TTFL+LTRSLYQAAR+GEGDEM
Sbjct: 346 RNVETFNVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEM 405

Query: 378 IDRMKSAGFGDSLDKKAYFGFLKILCGIERINPALNVFAKMKADGCKPGVQTYDLLVRKL 437
           IDRMKSAGFG++LDKKAY+ F+KILCGIERI+ A+++F+KMK DGCKPG++TYDLL+ KL
Sbjct: 406 IDRMKSAGFGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKL 465

Query: 438 YAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFVKKTKVVKKKGKKRLTLPEKTVLKRK 497
            AHGR++KA ALFSEAV   VPV+SK YK+DPRFVKK  V KK+ KKR TLPEK   KR+
Sbjct: 466 CAHGRLDKANALFSEAVNRGVPVESKAYKLDPRFVKKPTVAKKE-KKRETLPEKMARKRR 525

Query: 498 NLRKHNLSFVKKPKKM 512
            LRK  LSFVKKPK+M
Sbjct: 526 RLRKIRLSFVKKPKRM 528

BLAST of Spo25370.1 vs. UniProtKB/TrEMBL
Match: A0A103XYI7_CYNCS (Pentatricopeptide repeat-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_022480 PE=4 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 2.800e-175
Identity = 334/520 (64.23%), Postives = 400/520 (76.92%), Query Frame = 1

		  

Query: 7   LRRLLHLRHFSTPSFRPPPPSLTALKPH--FTPPSKPHHLPS----LLPFPLR-----SF 66
           LR LL  R+FS+P   PPPP L ++  H  F  P KP  +P      +PF L      S 
Sbjct: 13  LRILLRRRYFSSPP--PPPPPLQSIYRHQRFLNPQKPS-IPKPYSLFIPFSLSFSKFFSS 72

Query: 67  TTQPSQTSQDNDQISLSLSSELLK-PSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKS 126
            TQ   + QD+  I+ +LS ELLK P+DQ  SL L+QRLDLSFSHITL+ +LIL TLN S
Sbjct: 73  QTQIETSLQDSLDIAQTLSYELLKDPNDQ--SLPLNQRLDLSFSHITLTSTLILNTLNLS 132

Query: 127 SDAGRNAFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTF 186
           S +GR A DF KWVS ++ DF LTDE  + F+DYFGRR DFK  H++LV  KGV G KTF
Sbjct: 133 SKSGRTALDFHKWVSERT-DFNLTDESLAHFIDYFGRRNDFKATHEVLVASKGVSGVKTF 192

Query: 187 AASIDRLVRAGRATQAVSFFDRMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLA 246
            +SIDRLVRAGR TQ V+FFD+ME++YG VR+  SL  IV+KLCEH + +YAEKMV N+A
Sbjct: 193 ESSIDRLVRAGRPTQVVAFFDKMESDYGFVRNMDSLKLIVSKLCEHGFASYAEKMVTNVA 252

Query: 247 NEFFPNEYVCDVLIKGWCVDGKLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKD 306
           NEFFP+E++CD LIKGWCVDGKL+EARRL++EMYRGGFE+G VAYN+IL+C+CKLCR+KD
Sbjct: 253 NEFFPDEFICDTLIKGWCVDGKLDEARRLSQEMYRGGFEIGPVAYNAILDCVCKLCRKKD 312

Query: 307 PSRLQSEADDVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNAT 366
           P RLQSEA+ VL+DMD AGVPRN ETFNVL++NLCKIRKTE+AM LF RMGEWGC+PN  
Sbjct: 313 PFRLQSEAEKVLIDMDVAGVPRNVETFNVLITNLCKIRKTEEAMNLFDRMGEWGCHPNEE 372

Query: 367 TFLILTRSLYQAARIGEGDEMIDRMKSAGFGDSLDKKAYFGFLKILCGIERINPALNVFA 426
           TFLIL +SLYQAARIGEGDEMIDRMKSAGFG +L+KK Y+ FLKILCGIERI+ AL VF 
Sbjct: 373 TFLILIKSLYQAARIGEGDEMIDRMKSAGFGGALNKKVYYEFLKILCGIERIDHALTVFV 432

Query: 427 KMKADGCKPGVQTYDLLVRKLYAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFVKKTK 486
           KMK DGC+PG++TYDLL+ KL  HGRV+KA  LF EA    + V+ K YK+DPRF+KK  
Sbjct: 433 KMKKDGCEPGIKTYDLLMGKLCGHGRVDKANLLFKEAEKRGLAVEPKAYKLDPRFIKKPA 492

Query: 487 VVKKKGKKRLTLPEKTVLKRKNLRKHNLSFVKKPKKMMQR 515
            VK+  KKR TLPEK   KR+ L+K  LSFVKKPKK  +R
Sbjct: 493 AVKE--KKRETLPEKMARKRRRLKKIRLSFVKKPKKAQRR 524

BLAST of Spo25370.1 vs. UniProtKB/TrEMBL
Match: A0A068V3A6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00042898001 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 1.600e-170
Identity = 321/536 (59.89%), Postives = 393/536 (73.32%), Query Frame = 1

		  

Query: 6   HLRRLLHLRHFS---------TP-----SFRPPPPSLTALKP-HFTPPSKPHHLPSLLPF 65
           HLR+LL  R FS         TP     S  PPP       P   T  +   H     PF
Sbjct: 12  HLRKLL--RSFSSSVIVTRQRTPKHLFLSQSPPPLHHPFSHPITITGAANASHFLLHHPF 71

Query: 66  PLRSFTTQPSQTSQDN------------DQISLSLSSELLKPSDQPDSLSLSQRLDLSFS 125
            LR F    S  + D+            + ++ SL+ ELLK  D  +SLSLSQRLDLSF+
Sbjct: 72  SLRRFCASSSSPTDDDLSATERDPFVEEETLAQSLAYELLKDPDL-ESLSLSQRLDLSFA 131

Query: 126 HITLSPSLILQTLNKSSDAGRNAFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKDFKII 185
           H+TL+PSL+  TL+ S DAGR   DF KWVSS+   F + DE++S FVDYFGRRKDFK  
Sbjct: 132 HVTLTPSLVFNTLSLSLDAGRTVIDFLKWVSSRPNAFDVDDELFSYFVDYFGRRKDFKAA 191

Query: 186 HDILVGGKGVIGSKTFAASIDRLVRAGRATQAVSFFDRMENEYGIVRDRKSLDYIVTKLC 245
           HD+LV G G  G K+F + +DRLVRAGR TQAV+ F++ME EYG+ R+   L  IV+KLC
Sbjct: 192 HDVLVDGIGKTGWKSFESLVDRLVRAGRPTQAVALFEKMETEYGLKRNLDYLKLIVSKLC 251

Query: 246 EHKYPNYAEKMVKNLANEFFPNEYVCDVLIKGWCVDGKLEEARRLAREMYRGGFELGTVA 305
           EH + +YAEKMVK+LANEFFP+EY+CD LI+GWCVD KL+EA+RLA EMYRGGFE+ T+A
Sbjct: 252 EHGFASYAEKMVKSLANEFFPDEYICDALIRGWCVDEKLDEAKRLAGEMYRGGFEISTLA 311

Query: 306 YNSILNCICKLCREKDPSRLQSEADDVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAM 365
           YN+IL+C+C+LCR+KDP RLQSEA  VLV+M+  G+PR+ ETFNVL++NLCKIRKTEDAM
Sbjct: 312 YNAILDCVCRLCRKKDPFRLQSEAQKVLVEMEEIGIPRDVETFNVLINNLCKIRKTEDAM 371

Query: 366 KLFHRMGEWGCYPNATTFLILTRSLYQAARIGEGDEMIDRMKSAGFGDSLDKKAYFGFLK 425
           KLF+RMGEWGCYPN TTF++L RSLYQAAR+GEGDEMIDRMKSAG+GD+LDKK Y+G LK
Sbjct: 372 KLFYRMGEWGCYPNETTFILLIRSLYQAARVGEGDEMIDRMKSAGYGDALDKKEYYGLLK 431

Query: 426 ILCGIERINPALNVFAKMKADGCKPGVQTYDLLVRKLYAHGRVEKAKALFSEAVCNEVPV 485
           ILCGIER++ A+ VF KMK  GCKPG++TYDLL+ KL AHGR++KA  L+ EA  N VPV
Sbjct: 432 ILCGIERVDHAMTVFVKMKEGGCKPGIKTYDLLMGKLCAHGRLDKANVLYKEAESNGVPV 491

Query: 486 QSKDYKVDPRFVKKTKVVKKKGKKRLTLPEKTVLKRKNLRKHNLSFVKKPKKMMQR 515
           + K YK+DPRFVKK     KK KKR TLPEK   KR+ L+K  LS+VKKPK+MM+R
Sbjct: 492 EPKAYKLDPRFVKKKPTAVKKEKKRETLPEKMARKRRTLKKLRLSYVKKPKRMMRR 544

BLAST of Spo25370.1 vs. ExPASy Swiss-Prot
Match: PP438_ARATH (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana GN=PNM1 PE=1 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 7.300e-153
Identity = 291/517 (56.29%), Postives = 378/517 (73.11%), Query Frame = 1

		  

Query: 4   SPHLRRLLHLRHF---STPSFRPPPPSLTALKPHFTPPSKPHHLPSLLPFPLRSFTTQPS 63
           S  LRRLL LR F   S+ +     P + + KP F+P   P        FP R F+++ +
Sbjct: 7   SLQLRRLL-LRSFISSSSVNTLQSQPRIISSKPLFSP-LPPSRSSIFSTFPSRFFSSETN 66

Query: 64  QTSQ--DNDQISLSLSSELLKPSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKSSDAG 123
             S+  D+++I+LS S EL    D  +S ++SQR +LSFSHIT +P LILQTLN S +AG
Sbjct: 67  AESESLDSNEIALSFSKELTGNPDA-ESQTISQRFNLSFSHITPNPDLILQTLNLSPEAG 126

Query: 124 RNAFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTFAASI 183
           R A  F +W+ S S +F  TDE  S FVDYFGRRKDFK + +I+   KG+ G KT  ++I
Sbjct: 127 RAALGFNEWLDSNS-NFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGGKTLESAI 186

Query: 184 DRLVRAGRATQAVSFFDRMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFF 243
           DRLVRAGR  Q   FF++MEN+YG+ RD++SL  +V KLCE  + + AEKMVKN ANE F
Sbjct: 187 DRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIF 246

Query: 244 PNEYVCDVLIKGWCVDGKLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRL 303
           P+E +CD+LI GWC+  KL+EA RLA EM RGGFE+GT AYN +L+C+CKLCR+KDP +L
Sbjct: 247 PDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKL 306

Query: 304 QSEADDVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLI 363
           Q E + VL++M+  GVPRNTETFNVL++NLCKIR+TE+AM LF RMGEWGC P+A T+L+
Sbjct: 307 QPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLV 366

Query: 364 LTRSLYQAARIGEGDEMIDRMKSAGFGDSLDKKAYFGFLKILCGIERINPALNVFAKMKA 423
           L RSLYQAARIGEGDEMID+MKSAG+G+ L+KK Y+GFLKILCGIER+  A++VF  MKA
Sbjct: 367 LIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKA 426

Query: 424 DGCKPGVQTYDLLVRKLYAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFV-KKTKVVK 483
           +GCKPG++TYDLL+ K+ A+ ++ +A  L+ EA    + V  K+Y+VDPRF+ KKTK V 
Sbjct: 427 NGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMKKKTKEVD 486

Query: 484 KKGKKRLTLPEKTVLKRKNLRKHNLSFVKKPKKMMQR 515
              KKR TLPEKT  K+K L++ N+SFVKKP   M+R
Sbjct: 487 SNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

BLAST of Spo25370.1 vs. ExPASy Swiss-Prot
Match: PP439_ARATH (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana GN=At5g61370 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.800e-40
Identity = 117/427 (27.40%), Postives = 216/427 (50.59%), Query Frame = 1

		  

Query: 93  LDLSFSHITLSPS--LILQTLN--KSSDAGRNAFDFFKWVSSKSPDFQLTDEVYSLFVDY 152
           L+ + + +++SPS  L+ Q +   K+  + R    FF W S KS    L D+ ++  +  
Sbjct: 54  LEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSW-SCKSLGSSLHDKEFNYVLRV 113

Query: 153 FGRRKD---FKIIHDILVGGKGVIGSKTFAASIDRLVRAGRATQAVSFFDRMENEYGIVR 212
              +KD    +I+   L      +  +TF+   + LV+ G+   A+  F ++ +++   +
Sbjct: 114 LAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIF-KILDKFSCPQ 173

Query: 213 DRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPNEY-VCDVLIKGWCVDGKLEEARRLA 272
           D  ++  I++ LC   +   A  ++ +  +    NE  V   L+ GW V   ++EARR+ 
Sbjct: 174 DGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVI 233

Query: 273 REMYRGGFELGTVAYNSILNCICKLCREKDPSRLQSEADDVLVDMDAAGVPRNTETFNVL 332
           ++M   G       +NS+L C+C+    ++PS L  EA +++++M +  +   + ++N+L
Sbjct: 234 QDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNIL 293

Query: 333 LSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILTRSLYQAARIGEGDEMIDRMKSAGF 392
           LS L + R+  ++ ++  +M   GC P+  ++  + R LY   R G+G++++D M   GF
Sbjct: 294 LSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGF 353

Query: 393 GDSLDKKAYFGFLKILCGIERINPALNVFAKMKADGCKPGVQTYDLLVRKLYAHGRVEKA 452
               ++K Y+  + +LCG+ER+N AL +F KMK        Q YDLL+ KL   G  EK 
Sbjct: 354 RP--ERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKG 413

Query: 453 KALFSEAVCNEVPVQSKDYKVDPRFVKKTKVVKKKGKKRLTLPEKTVLKRK--NLRKHNL 510
           + L+ EA+  +V +      +DP   +  K +K K        E  ++ R+  NL+ H  
Sbjct: 414 RELWEEALSIDVTLSCSISLLDPSVTEVFKPMKMK-------EEAAMVDRRALNLKIHAR 469

BLAST of Spo25370.1 vs. ExPASy Swiss-Prot
Match: PP150_ARATH (Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.700e-35
Identity = 103/369 (27.91%), Postives = 173/369 (46.88%), Query Frame = 1

		  

Query: 95  LSFSHITLSPSLILQTLNKSSDAGRNAFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKD 154
           L  + I+L+P+LI QTL +     + A  FF+++ S  P    T   ++L +D  GR + 
Sbjct: 62  LQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYLRSL-PSPSTTPTSFNLIIDILGRVRQ 121

Query: 155 FKIIHDILVGGKGVIGSKTFAASIDRLVRAGRATQAVSFFDR----MENE-YGIVRDRKS 214
           F ++  ++V        +TF   + RL+ AG   QAV  FD     +EN  + +V     
Sbjct: 122 FDVVRQLIVE-MDQTSPETFLILVKRLIAAGLTRQAVRAFDDAPCFLENRRFRLVE---- 181

Query: 215 LDYIVTKLCEHKYPNYAEKMVKNLANEFFPNEYVCDVLIKGWCVDGKLEEARRLAREMYR 274
             +++  LC++ Y   A  +      EF  +E V  +LI GWC   +++ A +   EM  
Sbjct: 182 FGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIE 241

Query: 275 GGFELGTVAYNSILNCICK---LCREKDPSRLQSEADDVLVDMDAAGVPRNTETFNVLLS 334
            G E   V YN +LN IC+   L  E+   R    A+ V  +M   G+  +  +F+++L 
Sbjct: 242 SGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSIVLH 301

Query: 335 NLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILTRSLYQAARIGEGDEMIDRMKSAGFGD 394
              +  K E  +     M   G  P   T+  + + L    R+ E +E+++ M  +G   
Sbjct: 302 MYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISP 361

Query: 395 SLDKKAYFGFLKILCGIERINPALNVFAKMKADGCKPGVQTYDLLVRKLYAHGRVEKAKA 454
           S     Y  F K   G +  N A+N++ KMK   CKP  QTY++L+      G++E  K 
Sbjct: 362 S--SATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKE 421

Query: 455 LFSEAVCNE 456
           ++ +   +E
Sbjct: 422 IWDDLKASE 422

BLAST of Spo25370.1 vs. ExPASy Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 7.000e-31
Identity = 96/367 (26.16%), Postives = 168/367 (45.78%), Query Frame = 1

		  

Query: 93  LDLSFSHITLSPSLILQTLNKSSDAGRNAFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRR 152
           L L+ S I L P LI++ L++  DAG   + FF W ++K P +  + EV    V    + 
Sbjct: 86  LALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLW-ATKQPGYFHSYEVCKSMVMILSKM 145

Query: 153 KDFK----IIHDILVGGKGVIGSKTFAASIDRLVRAGRATQAVSFFDRMENEYGIVRDRK 212
           + F     +I ++      +I  + F   + R   A    +AV   D M  +YG+  D  
Sbjct: 146 RQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMP-KYGLEPDEY 205

Query: 213 SLDYIVTKLCEHKYPNYAEKMVKNLANEFFPNEYVCDVLIKGWCVDGKLEEARRLAREMY 272
               ++  LC++     A K+ +++  +F PN      L+ GWC +GKL EA+ +  +M 
Sbjct: 206 VFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMK 265

Query: 273 RGGFELGTVAYNSILNCICKLCREKDPSRLQSEADDVLVDMDAAGVPRNTETFNVLLSNL 332
             G E   V + ++L+      +        ++A D++ DM   G   N   + VL+  L
Sbjct: 266 EAGLEPDIVVFTNLLSGYAHAGK-------MADAYDLMNDMRKRGFEPNVNCYTVLIQAL 325

Query: 333 CKIRK-TEDAMKLFHRMGEWGCYPNATTFLILTRSLYQAARIGEGDEMIDRMKSAGFGDS 392
           C+  K  ++AM++F  M  +GC  +  T+  L     +   I +G  ++D M+  G   S
Sbjct: 326 CRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS 385

Query: 393 LDKKAYFGFLKILCGIERINPALNVFAKMKADGCKPGVQTYDLLVRKLYAHGRVEKAKAL 452
             +  Y   +      E+    L +  KMK  GC P +  Y++++R     G V++A  L
Sbjct: 386 --QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRL 441

Query: 453 FSEAVCN 455
           ++E   N
Sbjct: 446 WNEMEAN 441

BLAST of Spo25370.1 vs. ExPASy Swiss-Prot
Match: PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 9.200e-31
Identity = 100/390 (25.64%), Postives = 179/390 (45.90%), Query Frame = 1

		  

Query: 93  LDLSFSHIT---LSPSLILQTLNKSSDAGRN-----AFDFFKWVSSKSPDFQLTDEVYSL 152
           L L FS I    +SPS++   + K            +  FF W +S+      +   Y+ 
Sbjct: 97  LSLDFSQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNE 156

Query: 153 FVDYFGRRKDFKI---IHDILVGGKGVIGSKTFAASIDRLVRAGRATQAVSFFDRMENEY 212
            +D  G+ + F +   + D++      I  +TF   I R VRAG A++AV  F+RME +Y
Sbjct: 157 MIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME-DY 216

Query: 213 GIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPNEYVCDVLIKGWCVDGKLEEAR 272
           G V D+ +   +++ L   +  + A+    +L + F P+  V   L++GWC  G++ EA 
Sbjct: 217 GCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAE 276

Query: 273 RLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRLQSEADDVLVDMDAAGVPRNTETF 332
           ++ +EM   G E     Y+ +++ +C+ C +       S A DV  DM  +G   N  TF
Sbjct: 277 KVFKEMKLAGIEPNVYTYSIVIDALCR-CGQ------ISRAHDVFADMLDSGCAPNAITF 336

Query: 333 NVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILTRSLYQAARIGEGDEMIDRMKS 392
           N L+    K  +TE  ++++++M + GC P+  T+  L  +  +   +    ++++ M  
Sbjct: 337 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTM-- 396

Query: 393 AGFGDSLDKKAYFG---FLKILCGIER---INPALNVFAKMKADGCKPGVQTYDLLVRKL 452
                 + KK       F  I   IE+   +N A  +++KM    C+P   TY++L+R  
Sbjct: 397 ------IKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMF 456

Query: 453 YAHGRVEKAKALFSEAVCNEVPVQSKDYKV 466
                 +    +  E    EV      Y++
Sbjct: 457 VGSKSTDMVLKMKKEMDDKEVEPNVNTYRL 470

BLAST of Spo25370.1 vs. TAIR (Arabidopsis)
Match: AT5G60960.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 542.0 bits (1395), Expect = 4.100e-154
Identity = 291/517 (56.29%), Postives = 378/517 (73.11%), Query Frame = 1

		  

Query: 4   SPHLRRLLHLRHF---STPSFRPPPPSLTALKPHFTPPSKPHHLPSLLPFPLRSFTTQPS 63
           S  LRRLL LR F   S+ +     P + + KP F+P   P        FP R F+++ +
Sbjct: 7   SLQLRRLL-LRSFISSSSVNTLQSQPRIISSKPLFSP-LPPSRSSIFSTFPSRFFSSETN 66

Query: 64  QTSQ--DNDQISLSLSSELLKPSDQPDSLSLSQRLDLSFSHITLSPSLILQTLNKSSDAG 123
             S+  D+++I+LS S EL    D  +S ++SQR +LSFSHIT +P LILQTLN S +AG
Sbjct: 67  AESESLDSNEIALSFSKELTGNPDA-ESQTISQRFNLSFSHITPNPDLILQTLNLSPEAG 126

Query: 124 RNAFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKDFKIIHDILVGGKGVIGSKTFAASI 183
           R A  F +W+ S S +F  TDE  S FVDYFGRRKDFK + +I+   KG+ G KT  ++I
Sbjct: 127 RAALGFNEWLDSNS-NFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGIAGGKTLESAI 186

Query: 184 DRLVRAGRATQAVSFFDRMENEYGIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFF 243
           DRLVRAGR  Q   FF++MEN+YG+ RD++SL  +V KLCE  + + AEKMVKN ANE F
Sbjct: 187 DRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIF 246

Query: 244 PNEYVCDVLIKGWCVDGKLEEARRLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRL 303
           P+E +CD+LI GWC+  KL+EA RLA EM RGGFE+GT AYN +L+C+CKLCR+KDP +L
Sbjct: 247 PDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKL 306

Query: 304 QSEADDVLVDMDAAGVPRNTETFNVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLI 363
           Q E + VL++M+  GVPRNTETFNVL++NLCKIR+TE+AM LF RMGEWGC P+A T+L+
Sbjct: 307 QPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLV 366

Query: 364 LTRSLYQAARIGEGDEMIDRMKSAGFGDSLDKKAYFGFLKILCGIERINPALNVFAKMKA 423
           L RSLYQAARIGEGDEMID+MKSAG+G+ L+KK Y+GFLKILCGIER+  A++VF  MKA
Sbjct: 367 LIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKA 426

Query: 424 DGCKPGVQTYDLLVRKLYAHGRVEKAKALFSEAVCNEVPVQSKDYKVDPRFV-KKTKVVK 483
           +GCKPG++TYDLL+ K+ A+ ++ +A  L+ EA    + V  K+Y+VDPRF+ KKTK V 
Sbjct: 427 NGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRVDPRFMKKKTKEVD 486

Query: 484 KKGKKRLTLPEKTVLKRKNLRKHNLSFVKKPKKMMQR 515
              KKR TLPEKT  K+K L++ N+SFVKKP   M+R
Sbjct: 487 SNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

BLAST of Spo25370.1 vs. TAIR (Arabidopsis)
Match: AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 167.9 bits (424), Expect = 1.600e-41
Identity = 117/427 (27.40%), Postives = 216/427 (50.59%), Query Frame = 1

		  

Query: 93  LDLSFSHITLSPS--LILQTLN--KSSDAGRNAFDFFKWVSSKSPDFQLTDEVYSLFVDY 152
           L+ + + +++SPS  L+ Q +   K+  + R    FF W S KS    L D+ ++  +  
Sbjct: 54  LEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSW-SCKSLGSSLHDKEFNYVLRV 113

Query: 153 FGRRKD---FKIIHDILVGGKGVIGSKTFAASIDRLVRAGRATQAVSFFDRMENEYGIVR 212
              +KD    +I+   L      +  +TF+   + LV+ G+   A+  F ++ +++   +
Sbjct: 114 LAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIF-KILDKFSCPQ 173

Query: 213 DRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPNEY-VCDVLIKGWCVDGKLEEARRLA 272
           D  ++  I++ LC   +   A  ++ +  +    NE  V   L+ GW V   ++EARR+ 
Sbjct: 174 DGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVI 233

Query: 273 REMYRGGFELGTVAYNSILNCICKLCREKDPSRLQSEADDVLVDMDAAGVPRNTETFNVL 332
           ++M   G       +NS+L C+C+    ++PS L  EA +++++M +  +   + ++N+L
Sbjct: 234 QDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNIL 293

Query: 333 LSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILTRSLYQAARIGEGDEMIDRMKSAGF 392
           LS L + R+  ++ ++  +M   GC P+  ++  + R LY   R G+G++++D M   GF
Sbjct: 294 LSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGF 353

Query: 393 GDSLDKKAYFGFLKILCGIERINPALNVFAKMKADGCKPGVQTYDLLVRKLYAHGRVEKA 452
               ++K Y+  + +LCG+ER+N AL +F KMK        Q YDLL+ KL   G  EK 
Sbjct: 354 RP--ERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKG 413

Query: 453 KALFSEAVCNEVPVQSKDYKVDPRFVKKTKVVKKKGKKRLTLPEKTVLKRK--NLRKHNL 510
           + L+ EA+  +V +      +DP   +  K +K K        E  ++ R+  NL+ H  
Sbjct: 414 RELWEEALSIDVTLSCSISLLDPSVTEVFKPMKMK-------EEAAMVDRRALNLKIHAR 469

BLAST of Spo25370.1 vs. TAIR (Arabidopsis)
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 4.000e-32
Identity = 96/367 (26.16%), Postives = 168/367 (45.78%), Query Frame = 1

		  

Query: 93  LDLSFSHITLSPSLILQTLNKSSDAGRNAFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRR 152
           L L+ S I L P LI++ L++  DAG   + FF W ++K P +  + EV    V    + 
Sbjct: 86  LALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLW-ATKQPGYFHSYEVCKSMVMILSKM 145

Query: 153 KDFK----IIHDILVGGKGVIGSKTFAASIDRLVRAGRATQAVSFFDRMENEYGIVRDRK 212
           + F     +I ++      +I  + F   + R   A    +AV   D M  +YG+  D  
Sbjct: 146 RQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMP-KYGLEPDEY 205

Query: 213 SLDYIVTKLCEHKYPNYAEKMVKNLANEFFPNEYVCDVLIKGWCVDGKLEEARRLAREMY 272
               ++  LC++     A K+ +++  +F PN      L+ GWC +GKL EA+ +  +M 
Sbjct: 206 VFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMK 265

Query: 273 RGGFELGTVAYNSILNCICKLCREKDPSRLQSEADDVLVDMDAAGVPRNTETFNVLLSNL 332
             G E   V + ++L+      +        ++A D++ DM   G   N   + VL+  L
Sbjct: 266 EAGLEPDIVVFTNLLSGYAHAGK-------MADAYDLMNDMRKRGFEPNVNCYTVLIQAL 325

Query: 333 CKIRK-TEDAMKLFHRMGEWGCYPNATTFLILTRSLYQAARIGEGDEMIDRMKSAGFGDS 392
           C+  K  ++AM++F  M  +GC  +  T+  L     +   I +G  ++D M+  G   S
Sbjct: 326 CRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS 385

Query: 393 LDKKAYFGFLKILCGIERINPALNVFAKMKADGCKPGVQTYDLLVRKLYAHGRVEKAKAL 452
             +  Y   +      E+    L +  KMK  GC P +  Y++++R     G V++A  L
Sbjct: 386 --QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRL 441

Query: 453 FSEAVCN 455
           ++E   N
Sbjct: 446 WNEMEAN 441

BLAST of Spo25370.1 vs. TAIR (Arabidopsis)
Match: AT1G20300.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 136.3 bits (342), Expect = 5.200e-32
Identity = 100/390 (25.64%), Postives = 179/390 (45.90%), Query Frame = 1

		  

Query: 93  LDLSFSHIT---LSPSLILQTLNKSSDAGRN-----AFDFFKWVSSKSPDFQLTDEVYSL 152
           L L FS I    +SPS++   + K            +  FF W +S+      +   Y+ 
Sbjct: 97  LSLDFSQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNE 156

Query: 153 FVDYFGRRKDFKI---IHDILVGGKGVIGSKTFAASIDRLVRAGRATQAVSFFDRMENEY 212
            +D  G+ + F +   + D++      I  +TF   I R VRAG A++AV  F+RME +Y
Sbjct: 157 MIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME-DY 216

Query: 213 GIVRDRKSLDYIVTKLCEHKYPNYAEKMVKNLANEFFPNEYVCDVLIKGWCVDGKLEEAR 272
           G V D+ +   +++ L   +  + A+    +L + F P+  V   L++GWC  G++ EA 
Sbjct: 217 GCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAE 276

Query: 273 RLAREMYRGGFELGTVAYNSILNCICKLCREKDPSRLQSEADDVLVDMDAAGVPRNTETF 332
           ++ +EM   G E     Y+ +++ +C+ C +       S A DV  DM  +G   N  TF
Sbjct: 277 KVFKEMKLAGIEPNVYTYSIVIDALCR-CGQ------ISRAHDVFADMLDSGCAPNAITF 336

Query: 333 NVLLSNLCKIRKTEDAMKLFHRMGEWGCYPNATTFLILTRSLYQAARIGEGDEMIDRMKS 392
           N L+    K  +TE  ++++++M + GC P+  T+  L  +  +   +    ++++ M  
Sbjct: 337 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTM-- 396

Query: 393 AGFGDSLDKKAYFG---FLKILCGIER---INPALNVFAKMKADGCKPGVQTYDLLVRKL 452
                 + KK       F  I   IE+   +N A  +++KM    C+P   TY++L+R  
Sbjct: 397 ------IKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMF 456

Query: 453 YAHGRVEKAKALFSEAVCNEVPVQSKDYKV 466
                 +    +  E    EV      Y++
Sbjct: 457 VGSKSTDMVLKMKKEMDDKEVEPNVNTYRL 470

BLAST of Spo25370.1 vs. TAIR (Arabidopsis)
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 127.9 bits (320), Expect = 1.800e-29
Identity = 95/359 (26.46%), Postives = 169/359 (47.08%), Query Frame = 1

		  

Query: 95  LSFSHITLSPSLILQTLNKSSDAGRNAFDFFKWVSSKSPDFQLTDEVYSLFVDYFGRRKD 154
           L+ + + LSP+LI + L K S+AG  A   FKW  ++   F+ T   Y+  ++  G+ K 
Sbjct: 85  LNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQK-GFKHTTSNYNALIESLGKIKQ 144

Query: 155 FKIIHDIL--VGGKGVIGSKTFAASIDRLVRAGRATQAVSFFDRMENEYGIVRDRKSLDY 214
           FK+I  ++  +  K ++  +TFA    R  RA +  +A+  F +ME E+G   +    + 
Sbjct: 145 FKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKME-EFGFKMESSDFNR 204

Query: 215 IVTKLCEHKYPNYAEKMVKNLANE-FFPNEYVCDVLIKGWCVDGKLEEARRLAREMYRGG 274
           ++  L + +    A+K+   +  + F P+     +L++GW  +  L     + REM   G
Sbjct: 205 MLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEG 264

Query: 275 FELGTVAYNSILNCICKLCREKDPSRLQSEADDVLVDMDAAGVPRNTETFNVLLSNLCKI 334
           FE   VAY  I+N  CK  + ++  R  +E       M+      +   F  L++ L   
Sbjct: 265 FEPDVVAYGIIINAHCKAKKYEEAIRFFNE-------MEQRNCKPSPHIFCSLINGLGSE 324

Query: 335 RKTEDAMKLFHRMGEWGCYPNATTFLILTRSLYQAARIGEGDEMIDRMKSAGFGDSLDKK 394
           +K  DA++ F R    G    A T+  L  +   + R+ +  + +D M+  G G   + +
Sbjct: 325 KKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGP--NAR 384

Query: 395 AYFGFLKILCGIERINPALNVFAKMKADGCKPGVQTYDLLVRKLYAHGRVEKAKALFSE 451
            Y   L  L  ++R   A  V+  M    C+P V TY+++VR      R++ A  ++ E
Sbjct: 385 TYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDE 429

The following BLAST results are available for this feature:
BLAST of Spo25370.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902227822|gb|KNA20846.1|7.7e-29699.8hypothetical protein SOVF_0485... [more]
gi|731367388|ref|XP_010695584.1|3.2e-23380.3PREDICTED: pentatricopeptide r... [more]
gi|731426036|ref|XP_010663464.1|2.8e-18166.9PREDICTED: pentatricopeptide r... [more]
gi|976912826|gb|KVH99290.1|4.0e-17564.2Pentatricopeptide repeat-conta... [more]
gi|719966986|ref|XP_010260497.1|1.5e-17464.4PREDICTED: pentatricopeptide r... [more]
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BLAST of Spo25370.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RMU1_SPIOL5.4e-29699.8Uncharacterized protein OS=Spi... [more]
A0A0J8BC87_BETVU2.2e-23380.3Uncharacterized protein OS=Bet... [more]
D7SIL7_VITVI2.0e-18166.9Putative uncharacterized prote... [more]
A0A103XYI7_CYNCS2.8e-17564.2Pentatricopeptide repeat-conta... [more]
A0A068V3A6_COFCA1.6e-17059.8Uncharacterized protein OS=Cof... [more]
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BLAST of Spo25370.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PP438_ARATH7.3e-15356.2Pentatricopeptide repeat-conta... [more]
PP439_ARATH2.8e-4027.4Pentatricopeptide repeat-conta... [more]
PP150_ARATH4.7e-3527.9Pentatricopeptide repeat-conta... [more]
PP275_ARATH7.0e-3126.1Pentatricopeptide repeat-conta... [more]
PPR54_ARATH9.2e-3125.6Pentatricopeptide repeat-conta... [more]
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BLAST of Spo25370.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT5G60960.14.1e-15456.2Pentatricopeptide repeat (PPR)... [more]
AT5G61370.11.6e-4127.4Pentatricopeptide repeat (PPR)... [more]
AT3G49730.14.0e-3226.1Tetratricopeptide repeat (TPR)... [more]
AT1G20300.15.2e-3225.6Pentatricopeptide repeat (PPR)... [more]
AT1G71060.11.8e-2926.4Tetratricopeptide repeat (TPR)... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 239..288
score: 1.2E-7coord: 317..363
score: 9.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 409..432
score: 0
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 320..353
score: 4.6E-9coord: 242..274
score: 0
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 170..200
score: 7.224coord: 424..458
score: 7.618coord: 389..423
score: 8.802coord: 317..351
score: 12.299coord: 352..386
score: 7.432coord: 240..274
score: 10.238coord: 275..316
score: 5
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 41..457
score: 2.1E
NoneNo IPR availablePANTHERPTHR24015:SF831PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PNM1, MITOCHONDRIALcoord: 41..457
score: 2.1E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009640 photomorphogenesis
biological_process GO:0000096 sulfur amino acid metabolic process
biological_process GO:0016132 brassinosteroid biosynthetic process
biological_process GO:0008652 cellular amino acid biosynthetic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006546 glycine catabolic process
biological_process GO:0006096 glycolytic process
biological_process GO:0000338 protein deneddylation
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0007020 microtubule nucleation
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0019748 secondary metabolic process
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006086 acetyl-CoA biosynthetic process from pyruvate
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0042742 defense response to bacterium
biological_process GO:0009735 response to cytokinin
biological_process GO:0006544 glycine metabolic process
biological_process GO:0006564 L-serine biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006566 threonine metabolic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0000478 endonucleolytic cleavage involved in rRNA processing
biological_process GO:0006979 response to oxidative stress
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0009072 aromatic amino acid family metabolic process
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0015774 polysaccharide transport
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006412 translation
biological_process GO:0010020 chloroplast fission
biological_process GO:0000918 division septum site selection
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006353 DNA-templated transcription, termination
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005730 nucleolus
cellular_component GO:0005618 cell wall
cellular_component GO:0005654 nucleoplasm
cellular_component GO:0022626 cytosolic ribosome
cellular_component GO:0005634 nucleus
cellular_component GO:0016020 membrane
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0000311 plastid large ribosomal subunit
cellular_component GO:0009579 thylakoid
cellular_component GO:0005829 cytosol
cellular_component GO:0005768 endosome
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009706 chloroplast inner membrane
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0005488 binding
molecular_function GO:0051920 peroxiredoxin activity
molecular_function GO:0045430 chalcone isomerase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0030899 calcium-dependent ATPase activity
molecular_function GO:0004617 phosphoglycerate dehydrogenase activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0016597 amino acid binding
molecular_function GO:0008693 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity
molecular_function GO:0043754 dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity
molecular_function GO:0008266 poly(U) RNA binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0005515 protein binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0005504 fatty acid binding
RNA-Seq Expression