Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGGACTGATACCATTTATTGTCCGTGCGATGAAGAAGCAAAACATACACAAGCATAGCTTCCGATGCGTTTCAGATGGGTCGAGACGAAGCTATCAGTTGTTAGGAAGTGCCGGTGACTCATTCAACGGGTCGTCTCATCGGCGTACGCAGTCGGAGTTTCAAGCCCCTATTGGACTGCAGGATTTCCAGCAGCCTCAAGTAGTTGATCACTTTATACGTTCACGTAGTATCAACACTAACAATATCAATAATGATGCTGCTACCAAAGGGACAAGGCAAATACATCAAAATCATGCTCATGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTGCTTATAATTATAATTTTGATTATGGTGATAAGCATGCTTCTAACACGATCAACAAGTTTCATCACTATTAG ATGGAGGGACTGATACCATTTATTGTCCGTGCGATGAAGAAGCAAAACATACACAAGCATAGCTTCCGATGCGTTTCAGATGGGTCGAGACGAAGCTATCAGTTGTTAGGAAGTGCCGGTGACTCATTCAACGGGTCGTCTCATCGGCGTACGCAGTCGGAGTTTCAAGCCCCTATTGGACTGCAGGATTTCCAGCAGCCTCAAGTAGTTGATCACTTTATACGTTCACGTAGTATCAACACTAACAATATCAATAATGATGCTGCTACCAAAGGGACAAGGCAAATACATCAAAATCATGCTCATGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTGCTTATAATTATAATTTTGATTATGGTGATAAGCATGCTTCTAACACGATCAACAAGTTTCATCACTATTAG ATGGAGGGACTGATACCATTTATTGTCCGTGCGATGAAGAAGCAAAACATACACAAGCATAGCTTCCGATGCGTTTCAGATGGGTCGAGACGAAGCTATCAGTTGTTAGGAAGTGCCGGTGACTCATTCAACGGGTCGTCTCATCGGCGTACGCAGTCGGAGTTTCAAGCCCCTATTGGACTGCAGGATTTCCAGCAGCCTCAAGTAGTTGATCACTTTATACGTTCACGTAGTATCAACACTAACAATATCAATAATGATGCTGCTACCAAAGGGACAAGGCAAATACATCAAAATCATGCTCATGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTGCTTATAATTATAATTTTGATTATGGTGATAAGCATGCTTCTAACACGATCAACAAGTTTCATCACTATTAG MEGLIPFIVRAMKKQNIHKHSFRCVSDGSRRSYQLLGSAGDSFNGSSHRRTQSEFQAPIGLQDFQQPQVVDHFIRSRSINTNNINNDAATKGTRQIHQNHAHAPAPAPAPAPAPAPAAYNYNFDYGDKHASNTINKFHHY Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo25145.1 vs. NCBI nr
Match: gi|902147038|gb|KNA05125.1| (hypothetical protein SOVF_193290 [Spinacia oleracea]) HSP 1 Score: 270.8 bits (691), Expect = 1.400e-69 Identity = 136/140 (97.14%), Postives = 136/140 (97.14%), Query Frame = 1
BLAST of Spo25145.1 vs. NCBI nr
Match: gi|731352067|ref|XP_010687346.1| (PREDICTED: uncharacterized protein LOC104901457 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 155.2 bits (391), Expect = 8.300e-35 Identity = 87/141 (61.70%), Postives = 101/141 (71.63%), Query Frame = 1
BLAST of Spo25145.1 vs. NCBI nr
Match: gi|359475444|ref|XP_003631687.1| (PREDICTED: uncharacterized protein LOC100854891 [Vitis vinifera]) HSP 1 Score: 80.1 bits (196), Expect = 3.400e-12 Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 1
BLAST of Spo25145.1 vs. NCBI nr
Match: gi|970000015|ref|XP_015085950.1| (PREDICTED: uncharacterized protein LOC107029134 [Solanum pennellii]) HSP 1 Score: 78.6 bits (192), Expect = 9.800e-12 Identity = 41/64 (64.06%), Postives = 48/64 (75.00%), Query Frame = 1
BLAST of Spo25145.1 vs. NCBI nr
Match: gi|723664977|ref|XP_010315179.1| (PREDICTED: uncharacterized protein LOC104645408 [Solanum lycopersicum]) HSP 1 Score: 78.6 bits (192), Expect = 9.800e-12 Identity = 41/64 (64.06%), Postives = 48/64 (75.00%), Query Frame = 1
BLAST of Spo25145.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QD12_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193290 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 9.400e-70 Identity = 136/140 (97.14%), Postives = 136/140 (97.14%), Query Frame = 1
BLAST of Spo25145.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BV59_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g189570 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 5.800e-35 Identity = 87/141 (61.70%), Postives = 101/141 (71.63%), Query Frame = 1
BLAST of Spo25145.1 vs. UniProtKB/TrEMBL
Match: K4B2S7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 4.000e-12 Identity = 48/91 (52.75%), Postives = 61/91 (67.03%), Query Frame = 1
BLAST of Spo25145.1 vs. UniProtKB/TrEMBL
Match: K4B2S6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 6.900e-12 Identity = 41/64 (64.06%), Postives = 48/64 (75.00%), Query Frame = 1
BLAST of Spo25145.1 vs. UniProtKB/TrEMBL
Match: B9SNE4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0175580 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.600e-11 Identity = 41/86 (47.67%), Postives = 62/86 (72.09%), Query Frame = 1
BLAST of Spo25145.1 vs. TAIR (Arabidopsis)
Match: AT3G19615.1 (unknown protein) HSP 1 Score: 53.1 bits (126), Expect = 1.600e-7 Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo25145.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo25145.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo25145.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo25145.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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