Spo25118 (gene)

Overview
NameSpo25118
Typegene
OrganismSpinacia oleracea (Spinach)
Descriptionchloroplast RNA binding
Locationchr4 : 11494307 .. 11499701 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGTAGTGTCAAGCCGTGTCGGATATTCGTGTCTAAGTGTAATTTCACTCCATTTAGTGTGCATTGTCAGAACGTGACATGCCTTATTGTGCTTTTTCCCAACAAACGTGGCCCAATTGCAGCCCAGGACCAATGGCTTTGTGCCTTTGTGTCCATGCCGGGCCATACTTTTATCCTATTGGTCCGGCTTGTCCGCGGCCCAACCCGGCCCAATGCTATATTTAAGTGCAGCCAGAGAGTGTGGACGTTATAAACCGAGGTGTGATGTGGGGTCATCGTCTTATCCTAACCGTTATTGAATGGTGAAAACAGAGAAGAAACCAACTGAAAGAATACCACAAACTACTACAAAGAAAGAAAAAGATGGGATTGATCAATATTATTAAGACCAAACTTATCCCCTTCAATTTACAGCCATTGTCAAATACCCAGAAACTGCTTAGCCAATTACCCAGTAAGAAGCAGGAAAGATGGCAAGCAGATTGGTGGTTGTTCAACAACATCAACCTTCTTCTTTGGCATTCCTTCATTCTTCTCTCTCCTCTGACTTTAATGGCTGCAGACTCACTCACTCTGTTCAGGTATCACTTTAATTCCTCTCCCATTTTTCTATTTGTTTTGGGTATTGATCGAGTTTAAGTTCGGAGTAGTACATTTGTCGGGATTAATAGTCACACGTACTATTTAGGTTGTTCTGAATTAACAATCACGTATACGATTGATTATTGTTTGAATTAATAGTCACGTGTACTATTTAGGTTATTCAGAGTTAATAATCACGTATACCCTTGATTATTGTTGCCTTGTTGAGGGTTTTTGTAAAATCGTGGGATTGAGACAATGTAACAACTATTTTCCCGGCCTTGGGATGGATGGATGGGAATGTTTGCTATTGTAAGTTCATTTGGTTATAATTGGGAAAGAGATTGCCTCATGCCCATTAATCCTTATCAATTCGAAAAATGTACTAGTCTTCACTAGATAAGGATAAGGTTGCGTACATTTGGACTTGTCAACAACGAGAAAATTGATGTGTTGTTGGTGTTTTCTATGTCATGTTTTGAGTGTTTTTGCAAACATTTAGCTTGTACATTAGTGTCCTACTATGTTGGTGATTGGTTATGATAGGTTTGGAGAAGAAAAAAAAGCTTTTTGAAATGAAATTATAGATTTGACAATTTCAAAAAGCTAATGTGAGTATTTGTTTAGGAGGGGTTTGGATGAGAGTTTTGGGATGAAAAAATTCAATGTAAGAGTTTTTTGCATTAGAGGTTTGAAGAATTAAGTAGGTGTAAAATGACAACTTTATCCTAATATATCTAGAATTACAACTTTTAACAACTTACTTCACTTTATGTCAATAAACATTACTAGTCATTTACCCATCAAACAACTAACAACCAATTTGCCAAACACTATACATAAACAACAACTTCAAATTGTCGGTCAAACCAGCTAGTACTGAGAGGTAACAGTTAGTCAAACCAGCTAACAACTAATTGCCAAACATGGCCATGGCATCAGAATTTCGAATTATACTTCATAATCAATAATTAATTTTACTTGATGTTGGTTATTGTTGCAGTTCAAGAGAAATGTAGTGCAACCAAAAGGAGCATTACATGTTACAGCATCAAGTGCCAAGAAAATCCTTATTATGGGAGGCACCCGATTCATTGGTTTATTCTTGTCAAGACTCCTTGTCAAGGAAGGACATCAGGTAATCGCGTTGATTCCAAATCTTTTATCCCACATTTTGTGTGCCACTCGTATTTAGTACTGTATTTTATTAGTTGGTACTAGGAATATGGCTCGACCCTTTGCAAGAACCAATCAAAATAAAAATGAGACACTAACTTTTCGTGTTAACAATAAGTTTGTGGTTGTGCTTGACATTAGGTGACTCTATTTACAAGAGGAAAAGCACCAATTGCCCAACAGTTGCCTGGTGAATCAGAAGCTGAATTTGCTGATTTTTCATCCAAGGTAAATATGCTGATAGCTAAAAATGGAGATGATTTCATCAACATAATTTTAGTTGTATATATAATCAGGAGTAATATGGTTAGTGTACTAATCAGTAATCACTTTTCCTGATTCATAGATCCAGCACTTGAAAGGTGACAGACAGGATTTTGATTTCGTCAAAAGCAGCCTGTCTGCTGAAGGCTATGATGTTGTTTACGACATAAATGGTGGGTTTACATTGTTAATGGATTTCTTTAGAAGGCTCCTAATGAGTTTGTGTTTGGAAATTTGACCTTATATATATACCTCGTCACATTTCAGGGAGAGAGGCAGTTGAGGTAGAACCAATATTGGACGCGCTTCCAAAGCTAGAACAGTAAGACCCATTTCTTTTTGGTTGAATTTCAGGATTTCTGATTTCAGTTCAGTTCAGTTCAGTTCAGTAGCATTCAATTCAGTTCAGTTCAGTAGCATTCAGTTCAGTTCAGTTCAGTAGCATTCAATTTAGTTCAGTTCAGTAGCATTCAATTTAGTCAATTCAGTTCAGTAAAGTTCTGCTCAAAATAACAACGCCTAAACCTTGTCTTCTATAGTACTGATTTTCTCATGGATTCAGGCAGATTAAGGTTCAGAATTGTTCTGAATATGAAGATCACACTTTTTCGCAGTTGTTTTGTAGTAACTTATATAATATGTTCCTTTTCTTACCAGATATATTTACTGCTCCTCGGCTGGTGTCTACCTTAAATCAGACCTCATGCCACATTGTGAGGTAATCTGTAATCCTTTACATTTCCAAATTTAAGAGTTGAATACTGCCTTAAAGCATGGATTCAGAAGTTGACACAGTTGTAGCATTGAAATCTCATGTTTTCCTAACATTACTGATTACTGATTACACTATATTTTTCAGGTAGATGCTGTTGATCCGAAGAGTAGGCACAAGGGAAAGCTTGACACAGAGAGCTTGCTTCAGACAAGGGGGGTAAATTGGACTGCTTTAAGACCTGTATACATCTATGGTCCATTGAACTACAACCCTGTCGAAGAATGGTTCTTCCACCGACTCAAAGCTGGCCGCCCAATTCCTATCCCTGGTTCAGGAATTCAAATTACCAGTCTTGGTCATGTTAAGGTGAGCAACAAATAACTCAGTCTTACCTGTTTTTAAATCCATTTGTGCCATCAGAAAGTAGTAATACATTAGTGCAGTTTCTTGTGAACAAACCGCACTTCCTAGAGAAACAATATGAGAAAAGAGCTGAGCTTGAGGCCTTGTTCTGTTCAACTTATATAAGAAAAATCAGTTCAAATGATTAAAAATGAGTTTTAATTTATAATAAGCAAAAATCAGTTTTAGTCGGTAATAATCAGTTCAGTTCTGTTAAGATCAATCAAAGATGTTAGAACATGCCTTGAATCAGTCTACTCCGCTTTCTGTTTTGGCCTATTTTCTTGGAAAATCCGCATCTGTCTACAGATTTCTATATTAACTTTTTAGGTCATAACCTAGTTGTATTGTGTAATATGTACTCCTCAAGATCAATAAAACTTCCCTCTGCTCTGCATGTGATCCACGTTAAATCTCTATGTTCTTTATTACGTCGTTTATTGTCTTTATCGCTTCTGTTATAACAGATGATAATATTGCATGTAGTTGTATGCATGAGTATGTACTTGCATGATGGCAAGATTTGCAGATTAATTAAATAGTCTAATATTGAGATCATTATTCTAGGATTTGGCAGATGCTTTCGTACGTGTTCTTGGAAACGACGTAGCAAGCGGGCAAGTCTACAACATTTCTGGAGACAAGTATGTAACCTTTGATGGACTAGCAAAGGCGTGTGCTAAGGTAATGTAGCTAAAATTTTGAACTTGTTAAAGATAAGACAAAGGCCTAAATTATATGTACTCGAAACCAACTGTTAATTTTCTGATTATTGTGTTGATTTATTGCATTCGTTGTTCAGGCTGGTGGATTTCCAGAACCTGAGATAATCCATTACAACCAAAAGGAGTATGATTTTGGCAAAAAGAAGGCTTTCCCCTTCCGTGACCAGGTATGTACGATCAATAAACTCGATTAATGCTTGACAGTTTTTATCAGTAGTTCTTCTACATCTTCCTGTAGTAGTTTTATCAGTATGATTTTAGACAAGTCTTTCTCAATGCAACTCTATGCTCATTTGCTCATGAGTCATGAATCATGATCAGTTAGACAAACACATAGGAAATTCCCAAGTAGGTTCCCGTTAAAGTTTCAAGGCCTTAGGAGGTGTTTGGTTATGAGAGATTTGGGAGAAATGATGGCTTTTTGAGGTGCATTTGTGGTTTGAGCATTTCAAAAAGCTAATAGGAGTGTTTGATGAGGAGAGGTTTGGGATGAAAAGGCTCAACATAGGAGATTTTGGCATTGGAGGTTTGAAAAAATGATTTTTAAATGATAACTTTGTCTTAATATTGTCTAAAGATTACAACACTTACCAACTTACATCACTGTATGTAAATGACCTTAATGGTAAATTTACACATTAAAAAGCTACCAACTACGCAGTAACAGCTAATTTATCAAACACTTAATACAACCAGCTAATTCAAACAGCTAACAACTAGTCAAACCTAACAACTAAGTTAAAGTGTTTGCACAACCAGCTAATTCAAACAACTAACAACTAGTCAAACCATCTAACAGTTAATTGGCAAACAGCGTTATTGCATAAATGCTTAAATTTACCCCTTATGAGTTATGACCAGCTTTTTCTTCCAAACTAAAACCATGCAAACTGCTATTTTTTCACCAGACACATGATATATAACTGAATACTCTTGCTTGAAGTCCTTGAACTAGTCCTAATCATAAGGTTGTTTAATTTCTTAAATGCAGCATTTCTTTGCATCAATCGAAAAGGCGAAGAAAGAACTTGGATGGAAACCAGAGTTCGACTTGGTGGAAGGTCTTACAGACTCATACAACCTTGACTTTGGAAGGGGAACATTCAGGAAAGCAGCTGATTTCTCTACAGATGACATGATTTTGGGCAAGACCCTTGCTACTGTCTAGAACAAGAACAACTATCTCTTGTTGTAACCTACAATTTTCGTCTTCTTTAAGAATATTTTGATTACAATATGAGATTAGTGTCTGTAAAATGAATGAATTATGCAAATATTATACCGCGAATTCCAATTTGTATTGGCTTGTTTCTTGAAGTAGCTCTTGATAATACGGAGTATTAGTTACCACTTACGAGTACGTAGTACTCGTACGTAGTAGTTGGTAATTCTTACTCCGTATAGGTTGCTATCAATTGGTAGAAGGTACAACCGGTTACATGTAGAACTACACGCAACTGGTTCATTTTATACAATAAACCTCTCGAAAAACATAAATCTACAAATTAAAAACACTTTTAACAGTTTTTA

mRNA sequence

TATGTAGTGTCAAGCCGTGTCGGATATTCGTGTCTAAGTGTAATTTCACTCCATTTAGTGTGCATTGTCAGAACGTGACATGCCTTATTGTGCTTTTTCCCAACAAACGTGGCCCAATTGCAGCCCAGGACCAATGGCTTTGTGCCTTTGTGTCCATGCCGGGCCATACTTTTATCCTATTGGTCCGGCTTGTCCGCGGCCCAACCCGGCCCAATGCTATATTTAAGTGCAGCCAGAGAGTGTGGACGTTATAAACCGAGGTGTGATGTGGGGTCATCGTCTTATCCTAACCGTTATTGAATGGTGAAAACAGAGAAGAAACCAACTGAAAGAATACCACAAACTACTACAAAGAAAGAAAAAGATGGGATTGATCAATATTATTAAGACCAAACTTATCCCCTTCAATTTACAGCCATTGTCAAATACCCAGAAACTGCTTAGCCAATTACCCAGTAAGAAGCAGGAAAGATGGCAAGCAGATTGGTGGTTGTTCAACAACATCAACCTTCTTCTTTGGCATTCCTTCATTCTTCTCTCTCCTCTGACTTTAATGGCTGCAGACTCACTCACTCTGTTCAGTTCAAGAGAAATGTAGTGCAACCAAAAGGAGCATTACATGTTACAGCATCAAGTGCCAAGAAAATCCTTATTATGGGAGGCACCCGATTCATTGGTTTATTCTTGTCAAGACTCCTTGTCAAGGAAGGACATCAGGTGACTCTATTTACAAGAGGAAAAGCACCAATTGCCCAACAGTTGCCTGGTGAATCAGAAGCTGAATTTGCTGATTTTTCATCCAAGATCCAGCACTTGAAAGGTGACAGACAGGATTTTGATTTCGTCAAAAGCAGCCTGTCTGCTGAAGGCTATGATGTTGTTTACGACATAAATGGGAGAGAGGCAGTTGAGGTAGAACCAATATTGGACGCGCTTCCAAAGCTAGAACAATATATTTACTGCTCCTCGGCTGGTGTCTACCTTAAATCAGACCTCATGCCACATTGTGAGGTAGATGCTGTTGATCCGAAGAGTAGGCACAAGGGAAAGCTTGACACAGAGAGCTTGCTTCAGACAAGGGGGGTAAATTGGACTGCTTTAAGACCTGTATACATCTATGGTCCATTGAACTACAACCCTGTCGAAGAATGGTTCTTCCACCGACTCAAAGCTGGCCGCCCAATTCCTATCCCTGGTTCAGGAATTCAAATTACCAGTCTTGGTCATGTTAAGGATTTGGCAGATGCTTTCGTACGTGTTCTTGGAAACGACGTAGCAAGCGGGCAAGTCTACAACATTTCTGGAGACAAGTATGTAACCTTTGATGGACTAGCAAAGGCGTGTGCTAAGGCTGGTGGATTTCCAGAACCTGAGATAATCCATTACAACCAAAAGGAGTATGATTTTGGCAAAAAGAAGGCTTTCCCCTTCCGTGACCAGCATTTCTTTGCATCAATCGAAAAGGCGAAGAAAGAACTTGGATGGAAACCAGAGTTCGACTTGGTGGAAGGTCTTACAGACTCATACAACCTTGACTTTGGAAGGGGAACATTCAGGAAAGCAGCTGATTTCTCTACAGATGACATGATTTTGGGCAAGACCCTTGCTACTGTCTAGAACAAGAACAACTATCTCTTGTTGTAACCTACAATTTTCGTCTTCTTTAAGAATATTTTGATTACAATATGAGATTAGTGTCTGTAAAATGAATGAATTATGCAAATATTATACCGCGAATTCCAATTTGTATTGGCTTGTTTCTTGAAGTAGCTCTTGATAATACGGAGTATTAGTTACCACTTACGAGTACGTAGTACTCGTACGTAGTAGTTGGTAATTCTTACTCCGTATAGGTTGCTATCAATTGGTAGAAGGTACAACCGGTTACATGTAGAACTACACGCAACTGGTTCATTTTATACAATAAACCTCTCGAAAAACATAAATCTACAAATTAAAAACACTTTTAACAGTTTTTA

Coding sequence (CDS)

ATGGCAAGCAGATTGGTGGTTGTTCAACAACATCAACCTTCTTCTTTGGCATTCCTTCATTCTTCTCTCTCCTCTGACTTTAATGGCTGCAGACTCACTCACTCTGTTCAGTTCAAGAGAAATGTAGTGCAACCAAAAGGAGCATTACATGTTACAGCATCAAGTGCCAAGAAAATCCTTATTATGGGAGGCACCCGATTCATTGGTTTATTCTTGTCAAGACTCCTTGTCAAGGAAGGACATCAGGTGACTCTATTTACAAGAGGAAAAGCACCAATTGCCCAACAGTTGCCTGGTGAATCAGAAGCTGAATTTGCTGATTTTTCATCCAAGATCCAGCACTTGAAAGGTGACAGACAGGATTTTGATTTCGTCAAAAGCAGCCTGTCTGCTGAAGGCTATGATGTTGTTTACGACATAAATGGGAGAGAGGCAGTTGAGGTAGAACCAATATTGGACGCGCTTCCAAAGCTAGAACAATATATTTACTGCTCCTCGGCTGGTGTCTACCTTAAATCAGACCTCATGCCACATTGTGAGGTAGATGCTGTTGATCCGAAGAGTAGGCACAAGGGAAAGCTTGACACAGAGAGCTTGCTTCAGACAAGGGGGGTAAATTGGACTGCTTTAAGACCTGTATACATCTATGGTCCATTGAACTACAACCCTGTCGAAGAATGGTTCTTCCACCGACTCAAAGCTGGCCGCCCAATTCCTATCCCTGGTTCAGGAATTCAAATTACCAGTCTTGGTCATGTTAAGGATTTGGCAGATGCTTTCGTACGTGTTCTTGGAAACGACGTAGCAAGCGGGCAAGTCTACAACATTTCTGGAGACAAGTATGTAACCTTTGATGGACTAGCAAAGGCGTGTGCTAAGGCTGGTGGATTTCCAGAACCTGAGATAATCCATTACAACCAAAAGGAGTATGATTTTGGCAAAAAGAAGGCTTTCCCCTTCCGTGACCAGCATTTCTTTGCATCAATCGAAAAGGCGAAGAAAGAACTTGGATGGAAACCAGAGTTCGACTTGGTGGAAGGTCTTACAGACTCATACAACCTTGACTTTGGAAGGGGAACATTCAGGAAAGCAGCTGATTTCTCTACAGATGACATGATTTTGGGCAAGACCCTTGCTACTGTCTAG

Protein sequence

MASRLVVVQQHQPSSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKILIMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDRQDFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHCEVDAVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPEPEIIHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILGKTLATV
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo25118.1Spo25118.1mRNA


Homology
[Close]
BLAST of Spo25118.1 vs. NCBI nr
Match: gi|902202236|gb|KNA14214.1| (hypothetical protein SOVF_109010 [Spinacia oleracea])

HSP 1 Score: 776.2 bits (2003), Expect = 2.700e-221
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 1 

		  

Query: 1   MASRLVVVQQHQPSSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKIL 60
           MASRLVVVQQHQPSSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKIL
Sbjct: 1   MASRLVVVQQHQPSSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKIL 60

Query: 61  IMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDRQ 120
           IMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDRQ
Sbjct: 61  IMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDRQ 120

Query: 121 DFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHCE 180
           DFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHCE
Sbjct: 121 DFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHCE 180

Query: 181 VDAVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 240
           VDAVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI
Sbjct: 181 VDAVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 240

Query: 241 PGSGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPEP 300
           PGSGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPEP
Sbjct: 241 PGSGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPEP 300

Query: 301 EIIHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGT 360
           EIIHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGT
Sbjct: 301 EIIHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGT 360

Query: 361 FRKAADFSTDDMILGKTLATV 382
           FRKAADFSTDDMILGKTLATV
Sbjct: 361 FRKAADFSTDDMILGKTLATV 381
[Close]
BLAST of Spo25118.1 vs. NCBI nr
Match: gi|731327506|ref|XP_010674555.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 718.0 bits (1852), Expect = 8.700e-204
Identity = 351/382 (91.88%), Postives = 364/382 (95.29%), Query Frame = 1 

		  

Query: 1   MASRLVVVQQHQP-SSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKI 60
           MA RL+ VQQ+QP SSLA  HSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASS KKI
Sbjct: 1   MACRLMAVQQNQPASSLALFHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSGKKI 60

Query: 61  LIMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDR 120
           LIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPIAQQLPGE++A+FADFSSKI HLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGEADADFADFSSKILHLKGDR 120

Query: 121 QDFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHC 180
           QDFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDL+PHC
Sbjct: 121 QDFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHC 180

Query: 181 EVDAVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           E DAVDPKSRHKGKLDTESLL +RGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EADAVDPKSRHKGKLDTESLLASRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPGSGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPE 300
           IPGSGIQITSLGHVKDLA AF+ VLGND ASG+V+NISGDKYVTFDGLA+ACAKAGGFPE
Sbjct: 241 IPGSGIQITSLGHVKDLAKAFLLVLGNDKASGEVFNISGDKYVTFDGLARACAKAGGFPE 300

Query: 301 PEIIHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRG 360
           PEIIHYN KEYDFGKKK FPFRDQHFFASIEK K  LGWKPEFDLVEGLTDSYNLDFGRG
Sbjct: 301 PEIIHYNPKEYDFGKKKPFPFRDQHFFASIEKPKNLLGWKPEFDLVEGLTDSYNLDFGRG 360

Query: 361 TFRKAADFSTDDMILGKTLATV 382
           TFRKAADFSTDD+ILGKTLA V
Sbjct: 361 TFRKAADFSTDDIILGKTLAAV 382
[Close]
BLAST of Spo25118.1 vs. NCBI nr
Match: gi|747089109|ref|XP_011092178.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Sesamum indicum])

HSP 1 Score: 653.7 bits (1685), Expect = 2.000e-184
Identity = 317/378 (83.86%), Postives = 346/378 (91.53%), Query Frame = 1 

		  

Query: 1   MASRLVVVQQHQPSSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKIL 60
           MAS +VVV   QPSS + L SS  SDFNG RLT SVQ+KR + QPKGAL VTASS KKIL
Sbjct: 1   MAS-MVVVHHKQPSSTSILLSSSLSDFNGARLTASVQYKRKLWQPKGALRVTASSTKKIL 60

Query: 61  IMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDRQ 120
           IMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEA+FADFSSKI HLKGDR+
Sbjct: 61  IMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFADFSSKILHLKGDRK 120

Query: 121 DFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHCE 180
           DF+FVKSSL+AEG+DVVYDINGREAVEVEPIL+ALP LEQYIYCSSAGVYLKSD  PH E
Sbjct: 121 DFEFVKSSLAAEGFDVVYDINGREAVEVEPILEALPNLEQYIYCSSAGVYLKSDYPPHFE 180

Query: 181 VDAVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 240
           +DAVDPKSRHKGKL+TESLLQ+RGVNWT++RPVYIYGPLNYNPVEEWFFHRLKAGRPIPI
Sbjct: 181 IDAVDPKSRHKGKLETESLLQSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 240

Query: 241 PGSGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPEP 300
           P SG+Q+T LGHVKDLA AF++VLGN+ AS +V+NISG+KYVTFDGLAKACAKA GFPEP
Sbjct: 241 PNSGMQVTQLGHVKDLATAFIKVLGNEKASREVFNISGEKYVTFDGLAKACAKAAGFPEP 300

Query: 301 EIIHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGT 360
           EI+HYN KE+DFGKKK FPFRDQHFFAS+EKAK  LGWKPEFDLVEGL DSYNLDFGRGT
Sbjct: 301 EIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNLDFGRGT 360

Query: 361 FRKAADFSTDDMILGKTL 379
           FRK ADFSTDD+ILGK+L
Sbjct: 361 FRKEADFSTDDIILGKSL 377
[Close]
BLAST of Spo25118.1 vs. NCBI nr
Match: gi|727605393|ref|XP_010475766.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Camelina sativa])

HSP 1 Score: 649.8 bits (1675), Expect = 2.900e-183
Identity = 310/376 (82.45%), Postives = 349/376 (92.82%), Query Frame = 1 

		  

Query: 3   SRLVVVQQHQPSSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKILIM 62
           ++++++QQHQPS  + L SSLS DFNG ++   VQ+KR V QPKGAL+V+ASS KKILIM
Sbjct: 2   AKMMMLQQHQPS-FSLLTSSLS-DFNGAKIHLQVQYKRKVHQPKGALYVSASSEKKILIM 61

Query: 63  GGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDRQDF 122
           GGTRFIG+FLSRLLVKEGHQVTLFTRGK+PIA+QLPGES+ +FADFSSKI HLKGDR+D+
Sbjct: 62  GGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDY 121

Query: 123 DFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHCEVD 182
           DFVKSSLSAEG+DVVYDINGREA EVEPI+DALPKLEQYIYCSSAGVYLKSD++PHCE D
Sbjct: 122 DFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEED 181

Query: 183 AVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 242
           AVDPKSRHKGKL+TESLLQT+GVNWT++RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P 
Sbjct: 182 AVDPKSRHKGKLETESLLQTKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPN 241

Query: 243 SGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPEPEI 302
           SGIQI+ LGHVKDLA AF+ VLGN+ AS +++NISGDKYVTFDGLAKACAKAGGFPEPEI
Sbjct: 242 SGIQISQLGHVKDLATAFLNVLGNEKASKEIFNISGDKYVTFDGLAKACAKAGGFPEPEI 301

Query: 303 IHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGTFR 362
           +HYN KE+DFGKKKAFPFRDQHFFAS+EKAK+ LGWKPEFDLVEGLTDSYNLDFGRGTFR
Sbjct: 302 VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKRVLGWKPEFDLVEGLTDSYNLDFGRGTFR 361

Query: 363 KAADFSTDDMILGKTL 379
           K ADF+TDDMIL K L
Sbjct: 362 KEADFTTDDMILSKKL 375
[Close]
BLAST of Spo25118.1 vs. NCBI nr
Match: gi|727571341|ref|XP_010458216.1| (PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic-like [Camelina sativa])

HSP 1 Score: 647.9 bits (1670), Expect = 1.100e-182
Identity = 309/376 (82.18%), Postives = 348/376 (92.55%), Query Frame = 1 

		  

Query: 3   SRLVVVQQHQPSSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKILIM 62
           ++++++QQHQPS  + L SSLS DFNG +L   VQ+KR V QPKG L+V+ASS KKILIM
Sbjct: 2   AKMMMLQQHQPS-FSLLTSSLS-DFNGAKLHLQVQYKRKVHQPKGGLYVSASSEKKILIM 61

Query: 63  GGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDRQDF 122
           GGTRFIG+FLSRLLVKEGHQVTLFTRGK+PIA+QLPGES+ +FADFSSKI HLKGDR+D+
Sbjct: 62  GGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDY 121

Query: 123 DFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHCEVD 182
           DFVKSSLSAEG+DVVYDINGREA EVEPI+DALPKLEQYIYCSSAGVYLKSD++PHCE D
Sbjct: 122 DFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEED 181

Query: 183 AVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 242
           AVDPKSRHKGKL+TESLLQT+GVNWT++RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P 
Sbjct: 182 AVDPKSRHKGKLETESLLQTKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPN 241

Query: 243 SGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPEPEI 302
           SGIQI+ LGHVKDLA AF+ VLGN+ AS +++NISGDKYVTFDGLA+ACAKAGGFPEPEI
Sbjct: 242 SGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGDKYVTFDGLARACAKAGGFPEPEI 301

Query: 303 IHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGTFR 362
           +HYN KE+DFGKKKAFPFRDQHFFAS+EKAK+ LGWKPEFDLVEGLTDSYNLDFGRGTFR
Sbjct: 302 VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKRVLGWKPEFDLVEGLTDSYNLDFGRGTFR 361

Query: 363 KAADFSTDDMILGKTL 379
           K ADF+TDDMIL K L
Sbjct: 362 KEADFTTDDMILSKKL 375
[Close]
BLAST of Spo25118.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5K6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_109010 PE=4 SV=1)

HSP 1 Score: 776.2 bits (2003), Expect = 1.900e-221
Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 1 

		  

Query: 1   MASRLVVVQQHQPSSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKIL 60
           MASRLVVVQQHQPSSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKIL
Sbjct: 1   MASRLVVVQQHQPSSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKIL 60

Query: 61  IMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDRQ 120
           IMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDRQ
Sbjct: 61  IMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDRQ 120

Query: 121 DFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHCE 180
           DFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHCE
Sbjct: 121 DFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHCE 180

Query: 181 VDAVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 240
           VDAVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI
Sbjct: 181 VDAVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPI 240

Query: 241 PGSGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPEP 300
           PGSGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPEP
Sbjct: 241 PGSGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPEP 300

Query: 301 EIIHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGT 360
           EIIHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGT
Sbjct: 301 EIIHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGT 360

Query: 361 FRKAADFSTDDMILGKTLATV 382
           FRKAADFSTDDMILGKTLATV
Sbjct: 361 FRKAADFSTDDMILGKTLATV 381
[Close]
BLAST of Spo25118.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQA7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g080010 PE=4 SV=1)

HSP 1 Score: 718.0 bits (1852), Expect = 6.100e-204
Identity = 351/382 (91.88%), Postives = 364/382 (95.29%), Query Frame = 1 

		  

Query: 1   MASRLVVVQQHQP-SSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKI 60
           MA RL+ VQQ+QP SSLA  HSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASS KKI
Sbjct: 1   MACRLMAVQQNQPASSLALFHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSGKKI 60

Query: 61  LIMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDR 120
           LIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPIAQQLPGE++A+FADFSSKI HLKGDR
Sbjct: 61  LIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGEADADFADFSSKILHLKGDR 120

Query: 121 QDFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHC 180
           QDFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDL+PHC
Sbjct: 121 QDFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLLPHC 180

Query: 181 EVDAVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240
           E DAVDPKSRHKGKLDTESLL +RGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIP
Sbjct: 181 EADAVDPKSRHKGKLDTESLLASRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIP 240

Query: 241 IPGSGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPE 300
           IPGSGIQITSLGHVKDLA AF+ VLGND ASG+V+NISGDKYVTFDGLA+ACAKAGGFPE
Sbjct: 241 IPGSGIQITSLGHVKDLAKAFLLVLGNDKASGEVFNISGDKYVTFDGLARACAKAGGFPE 300

Query: 301 PEIIHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRG 360
           PEIIHYN KEYDFGKKK FPFRDQHFFASIEK K  LGWKPEFDLVEGLTDSYNLDFGRG
Sbjct: 301 PEIIHYNPKEYDFGKKKPFPFRDQHFFASIEKPKNLLGWKPEFDLVEGLTDSYNLDFGRG 360

Query: 361 TFRKAADFSTDDMILGKTLATV 382
           TFRKAADFSTDD+ILGKTLA V
Sbjct: 361 TFRKAADFSTDDIILGKTLAAV 382
[Close]
BLAST of Spo25118.1 vs. UniProtKB/TrEMBL
Match: A0A0D3C8Q5_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 647.1 bits (1668), Expect = 1.300e-182
Identity = 310/376 (82.45%), Postives = 349/376 (92.82%), Query Frame = 1 

		  

Query: 3   SRLVVVQQHQPSSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKILIM 62
           ++++++QQ QPS L+ L SSLS DFNG +L   VQ+KR V QPKGAL+V+ASS KKILIM
Sbjct: 2   AKMMMLQQSQPS-LSLLTSSLS-DFNGAKLHSQVQYKRKVQQPKGALYVSASSEKKILIM 61

Query: 63  GGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDRQDF 122
           GGTRFIG+FLSRLLVKEGHQVTLFTRGK+PIA+QLPGES+ +FADFSSKI HLKGDR+D+
Sbjct: 62  GGTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDY 121

Query: 123 DFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHCEVD 182
           DFVKSSLSAEG+DVVYDINGREA EVEPILDALPKLEQYIYCSSAGVYLKSD++PHCEVD
Sbjct: 122 DFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDVLPHCEVD 181

Query: 183 AVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 242
           AVDPKSRHKGKL+TESLLQ++GVNWT++RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P 
Sbjct: 182 AVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPN 241

Query: 243 SGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPEPEI 302
           SGIQI+ LGHVKDLA AF+ VLGN+ AS +++NISG+KYVTFDGLA+ACAKAGGFPEPEI
Sbjct: 242 SGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEI 301

Query: 303 IHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGTFR 362
           +HYN KE+DFGKKKAFPFRDQHFFAS+EKAK  LGWKPEFDLVEGLTDSYNLDFGRGTFR
Sbjct: 302 VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFR 361

Query: 363 KAADFSTDDMILGKTL 379
           K ADF+TDDMIL K L
Sbjct: 362 KEADFTTDDMILSKKL 375
[Close]
BLAST of Spo25118.1 vs. UniProtKB/TrEMBL
Match: A0A078E310_BRANA (BnaC05g06870D protein OS=Brassica napus GN=BnaC05g06870D PE=4 SV=1)

HSP 1 Score: 647.1 bits (1668), Expect = 1.300e-182
Identity = 310/376 (82.45%), Postives = 349/376 (92.82%), Query Frame = 1 

		  

Query: 3   SRLVVVQQHQPSSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKILIM 62
           ++++++QQ QPS L+ L SSLS DFNG +L   VQ+KR V QPKGAL+V+ASS KKILIM
Sbjct: 2   AKMMMLQQSQPS-LSLLTSSLS-DFNGAKLHSQVQYKRKVQQPKGALYVSASSEKKILIM 61

Query: 63  GGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDRQDF 122
           GGTRFIG+FLSRLLVKEGHQVTLFTRGK+PIA+QLPGES+ +FADFSSKI HLKGDR+D+
Sbjct: 62  GGTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDY 121

Query: 123 DFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHCEVD 182
           DFVKSSLSAEG+DVVYDINGREA EVEPILDALPKLEQYIYCSSAGVYLKSD++PHCEVD
Sbjct: 122 DFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSDVLPHCEVD 181

Query: 183 AVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 242
           AVDPKSRHKGKL+TESLLQ++GVNWT++RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P 
Sbjct: 182 AVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPN 241

Query: 243 SGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPEPEI 302
           SGIQI+ LGHVKDLA AF+ VLGN+ AS +++NISG+KYVTFDGLA+ACAKAGGFPEPEI
Sbjct: 242 SGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEI 301

Query: 303 IHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGTFR 362
           +HYN KE+DFGKKKAFPFRDQHFFAS+EKAK  LGWKPEFDLVEGLTDSYNLDFGRGTFR
Sbjct: 302 VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFR 361

Query: 363 KAADFSTDDMILGKTL 379
           K ADF+TDDMIL K L
Sbjct: 362 KEADFTTDDMILSKKL 375
[Close]
BLAST of Spo25118.1 vs. UniProtKB/TrEMBL
Match: R0GQE3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10009455mg PE=4 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 5.000e-182
Identity = 307/376 (81.65%), Postives = 349/376 (92.82%), Query Frame = 1 

		  

Query: 3   SRLVVVQQHQPSSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKILIM 62
           ++++++QQHQPS  + L+SSLS DFNG +L   VQ+KR V QPKGAL+V+ASS KKILIM
Sbjct: 2   AKMMMLQQHQPS-FSLLNSSLS-DFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIM 61

Query: 63  GGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDRQDF 122
           GGTRFIG+FLSRLLVKEGHQVTLFTRGK PIA+QLPGES+ +FADFSSKI HLKGDR+D+
Sbjct: 62  GGTRFIGVFLSRLLVKEGHQVTLFTRGKTPIAKQLPGESDQDFADFSSKILHLKGDRKDY 121

Query: 123 DFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHCEVD 182
           DFVKSSLSAEG+DVVYDINGREA EVEPI++ALPKLEQYIYCSSAGVYLKSD++PHCE D
Sbjct: 122 DFVKSSLSAEGFDVVYDINGREAEEVEPIIEALPKLEQYIYCSSAGVYLKSDILPHCEED 181

Query: 183 AVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 242
           AVDPKSRHKGKL+TESLLQ++GVNWT++RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P 
Sbjct: 182 AVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPN 241

Query: 243 SGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPEPEI 302
           SGIQI+ LGHVKDLA AF++VLGN+ AS +++NISG+KYVTFDGLA+ACAKAGGFPEPEI
Sbjct: 242 SGIQISQLGHVKDLATAFLKVLGNEKASREIFNISGEKYVTFDGLARACAKAGGFPEPEI 301

Query: 303 IHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGTFR 362
           +HYN KE+DFGKKKAFPFRDQHFFAS+EKAK  LGWKPEFDLVEGLTDSYNLDFGRGTFR
Sbjct: 302 VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFR 361

Query: 363 KAADFSTDDMILGKTL 379
           K ADF+TDDMIL K L
Sbjct: 362 KEADFTTDDMILSKKL 375
[Close]
BLAST of Spo25118.1 vs. ExPASy Swiss-Prot
Match: CP41B_ARATH (Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic OS=Arabidopsis thaliana GN=CSP41B PE=1 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 2.600e-184
Identity = 309/376 (82.18%), Postives = 348/376 (92.55%), Query Frame = 1 

		  

Query: 3   SRLVVVQQHQPSSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKILIM 62
           ++++++QQHQPS  + L SSLS DFNG +L   VQ+KR V QPKGAL+V+ASS KKILIM
Sbjct: 2   AKMMMLQQHQPS-FSLLTSSLS-DFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIM 61

Query: 63  GGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDRQDF 122
           GGTRFIGLFLSR+LVKEGHQVTLFTRGK+PIA+QLPGES+ +FADFSSKI HLKGDR+D+
Sbjct: 62  GGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDY 121

Query: 123 DFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHCEVD 182
           DFVKSSLSAEG+DVVYDINGREA EVEPIL+ALPKLEQYIYCSSAGVYLKSD++PHCE D
Sbjct: 122 DFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEED 181

Query: 183 AVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 242
           AVDPKSRHKGKL+TESLLQ++GVNWT++RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P 
Sbjct: 182 AVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPN 241

Query: 243 SGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPEPEI 302
           SGIQI+ LGHVKDLA AF+ VLGN+ AS +++NISG+KYVTFDGLAKACAKAGGFPEPEI
Sbjct: 242 SGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEI 301

Query: 303 IHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGTFR 362
           +HYN KE+DFGKKKAFPFRDQHFFAS+EKAK  LGWKPEFDLVEGLTDSYNLDFGRGTFR
Sbjct: 302 VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFR 361

Query: 363 KAADFSTDDMILGKTL 379
           K ADF+TDDMIL K L
Sbjct: 362 KEADFTTDDMILSKKL 375
[Close]
BLAST of Spo25118.1 vs. ExPASy Swiss-Prot
Match: CP41A_ARATH (Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic OS=Arabidopsis thaliana GN=CSP41A PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 8.500e-50
Identity = 125/371 (33.69%), Postives = 191/371 (51.48%), Query Frame = 1 

		  

Query: 14  SSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKILIM-----GGTRFI 73
           SS +F   S SS  +   LT S++  R +   K  +  ++   KK +++     GG   I
Sbjct: 36  SSSSFSSLSSSSSSSSSLLTFSLRTSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVI 95

Query: 74  GLFLSRLLVKEGHQVTLFTRG--KAPIAQQLPGESEAEFADFSSKIQHLKGDRQDFDFVK 133
           G + ++ L+  GH VT+ T G   +   ++ P    +E      K   + G+  +   V 
Sbjct: 96  GFYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGGGKT--VWGNPAN---VA 155

Query: 134 SSLSAEGYDVVYDINGREAVEVEPILDALPK--LEQYIYCSSAGVYLKSDLMPHCEVDAV 193
           + +  E +DVV D NG++   V P++D      ++Q+++ SSAG+Y  ++  PH E DAV
Sbjct: 156 NVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAV 215

Query: 194 DPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSG 253
              + H   +  E  L     NW + RP Y+ G  N    EEWFF R+   R +PIPGSG
Sbjct: 216 KADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSG 275

Query: 254 IQITSLGHVKDLADAFVRVLGN-DVASGQVYNISGDKYVTFDGLAKACAKAGGFPEPEII 313
           +Q+T++ HV+DL+      + N + ASG ++N   D+ VT DG+AK CA A G    EI+
Sbjct: 276 LQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-KTVEIV 335

Query: 314 HYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGTFRK 373
           HY+ K      KKAF FR+ HF+A    AK  LGW+ + +L E L + +      G  +K
Sbjct: 336 HYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPEDLKERFEEYVKIGRDKK 395

Query: 374 AADFSTDDMIL 375
              F  DD IL
Sbjct: 396 EIKFELDDKIL 397
[Close]
BLAST of Spo25118.1 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.600e-11
Identity = 79/347 (22.77%), Postives = 146/347 (42.07%), Query Frame = 1 

		  

Query: 57  KKILIMGGTRFIGLFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESEAEFADFS---- 116
           K+ILI GG  F+G  L+  L+ +GH+VT+   F  G+    +   G    E  +      
Sbjct: 89  KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148

Query: 117 -----SKIQHLKGDRQDFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKL-EQYIY 176
                 +I HL       +++ + +     + +  +N         +L    ++  + + 
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARLLL 208

Query: 177 CSSAGVYLKSDLMPHCE-----VDAVDPKSRH-KGKLDTESL----LQTRGVNWTALRPV 236
            S++ VY   ++ P  E     V+ + P++ + +GK   E++    ++  GV     R  
Sbjct: 209 ASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIF 268

Query: 237 YIYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQITSLGHVKDLADAFVRVLGNDVAS 296
             +GP   +N   V   F  +   G P+ + GSG Q  +  +V DL +  V ++ ++V+S
Sbjct: 269 NTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSS 328

Query: 297 G-QVYNISGDKYVTFDGLAKACAKAGGFPEPEIIHYNQKEYDFGKKKAFPFRDQHFFASI 356
              + N      + F  L K    +G     EI   ++ + D  K+K            I
Sbjct: 329 PVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRK----------PDI 388

Query: 357 EKAKKELGWKPEFDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILGK 377
           +KAK  LGW+P   L EGL  + +       FRK  ++  ++  + K
Sbjct: 389 KKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406
[Close]
BLAST of Spo25118.1 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.600e-11
Identity = 79/347 (22.77%), Postives = 146/347 (42.07%), Query Frame = 1 

		  

Query: 57  KKILIMGGTRFIGLFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESEAEFADFS---- 116
           K+ILI GG  F+G  L+  L+ +GH+VT+   F  G+    +   G    E  +      
Sbjct: 89  KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148

Query: 117 -----SKIQHLKGDRQDFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKL-EQYIY 176
                 +I HL       +++ + +     + +  +N         +L    ++  + + 
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARLLL 208

Query: 177 CSSAGVYLKSDLMPHCE-----VDAVDPKSRH-KGKLDTESL----LQTRGVNWTALRPV 236
            S++ VY   ++ P  E     V+ + P++ + +GK   E++    ++  GV     R  
Sbjct: 209 ASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIF 268

Query: 237 YIYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQITSLGHVKDLADAFVRVLGNDVAS 296
             +GP   +N   V   F  +   G P+ + GSG Q  +  +V DL +  V ++ ++V+S
Sbjct: 269 NTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSS 328

Query: 297 G-QVYNISGDKYVTFDGLAKACAKAGGFPEPEIIHYNQKEYDFGKKKAFPFRDQHFFASI 356
              + N      + F  L K    +G     EI   ++ + D  K+K            I
Sbjct: 329 PVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRK----------PDI 388

Query: 357 EKAKKELGWKPEFDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILGK 377
           +KAK  LGW+P   L EGL  + +       FRK  ++  ++  + K
Sbjct: 389 KKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406
[Close]
BLAST of Spo25118.1 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.600e-11
Identity = 79/347 (22.77%), Postives = 146/347 (42.07%), Query Frame = 1 

		  

Query: 57  KKILIMGGTRFIGLFLSRLLVKEGHQVTL---FTRGKAPIAQQLPGESEAEFADFS---- 116
           K+ILI GG  F+G  L+  L+ +GH+VT+   F  G+    +   G    E  +      
Sbjct: 89  KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148

Query: 117 -----SKIQHLKGDRQDFDFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKL-EQYIY 176
                 +I HL       +++ + +     + +  +N         +L    ++  + + 
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLN---------MLGLAKRVGARLLL 208

Query: 177 CSSAGVYLKSDLMPHCE-----VDAVDPKSRH-KGKLDTESL----LQTRGVNWTALRPV 236
            S++ VY   ++ P  E     V+ + P++ + +GK   E++    ++  GV     R  
Sbjct: 209 ASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIF 268

Query: 237 YIYGP---LNYNPVEEWFFHRLKAGRPIPIPGSGIQITSLGHVKDLADAFVRVLGNDVAS 296
             +GP   +N   V   F  +   G P+ + GSG Q  +  +V DL +  V ++ ++V+S
Sbjct: 269 NTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSS 328

Query: 297 G-QVYNISGDKYVTFDGLAKACAKAGGFPEPEIIHYNQKEYDFGKKKAFPFRDQHFFASI 356
              + N      + F  L K    +G     EI   ++ + D  K+K            I
Sbjct: 329 PVNLGNPEEHTILEFAQLIKNLVGSGS----EIQFLSEAQDDPQKRK----------PDI 388

Query: 357 EKAKKELGWKPEFDLVEGLTDSYNLDFGRGTFRKAADFSTDDMILGK 377
           +KAK  LGW+P   L EGL  + +       FRK  ++  ++  + K
Sbjct: 389 KKAKLMLGWEPVVPLEEGLNKAIHY------FRKELEYQANNQYIPK 406
[Close]
BLAST of Spo25118.1 vs. TAIR (Arabidopsis)
Match: AT1G09340.1 (chloroplast RNA binding)

HSP 1 Score: 646.0 bits (1665), Expect = 1.500e-185
Identity = 309/376 (82.18%), Postives = 348/376 (92.55%), Query Frame = 1 

		  

Query: 3   SRLVVVQQHQPSSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKILIM 62
           ++++++QQHQPS  + L SSLS DFNG +L   VQ+KR V QPKGAL+V+ASS KKILIM
Sbjct: 2   AKMMMLQQHQPS-FSLLTSSLS-DFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIM 61

Query: 63  GGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLKGDRQDF 122
           GGTRFIGLFLSR+LVKEGHQVTLFTRGK+PIA+QLPGES+ +FADFSSKI HLKGDR+D+
Sbjct: 62  GGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDY 121

Query: 123 DFVKSSLSAEGYDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSDLMPHCEVD 182
           DFVKSSLSAEG+DVVYDINGREA EVEPIL+ALPKLEQYIYCSSAGVYLKSD++PHCE D
Sbjct: 122 DFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSDILPHCEED 181

Query: 183 AVDPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPG 242
           AVDPKSRHKGKL+TESLLQ++GVNWT++RPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P 
Sbjct: 182 AVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPN 241

Query: 243 SGIQITSLGHVKDLADAFVRVLGNDVASGQVYNISGDKYVTFDGLAKACAKAGGFPEPEI 302
           SGIQI+ LGHVKDLA AF+ VLGN+ AS +++NISG+KYVTFDGLAKACAKAGGFPEPEI
Sbjct: 242 SGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKAGGFPEPEI 301

Query: 303 IHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGTFR 362
           +HYN KE+DFGKKKAFPFRDQHFFAS+EKAK  LGWKPEFDLVEGLTDSYNLDFGRGTFR
Sbjct: 302 VHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFR 361

Query: 363 KAADFSTDDMILGKTL 379
           K ADF+TDDMIL K L
Sbjct: 362 KEADFTTDDMILSKKL 375
[Close]
BLAST of Spo25118.1 vs. TAIR (Arabidopsis)
Match: AT3G63140.1 (chloroplast stem-loop binding protein of 41 kDa)

HSP 1 Score: 199.1 bits (505), Expect = 4.800e-51
Identity = 125/371 (33.69%), Postives = 191/371 (51.48%), Query Frame = 1 

		  

Query: 14  SSLAFLHSSLSSDFNGCRLTHSVQFKRNVVQPKGALHVTASSAKKILIM-----GGTRFI 73
           SS +F   S SS  +   LT S++  R +   K  +  ++   KK +++     GG   I
Sbjct: 36  SSSSFSSLSSSSSSSSSLLTFSLRTSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVI 95

Query: 74  GLFLSRLLVKEGHQVTLFTRG--KAPIAQQLPGESEAEFADFSSKIQHLKGDRQDFDFVK 133
           G + ++ L+  GH VT+ T G   +   ++ P    +E      K   + G+  +   V 
Sbjct: 96  GFYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGGGKT--VWGNPAN---VA 155

Query: 134 SSLSAEGYDVVYDINGREAVEVEPILDALPK--LEQYIYCSSAGVYLKSDLMPHCEVDAV 193
           + +  E +DVV D NG++   V P++D      ++Q+++ SSAG+Y  ++  PH E DAV
Sbjct: 156 NVVGGETFDVVLDNNGKDLDTVRPVVDWAKSSGVKQFLFISSAGIYKSTEQPPHVEGDAV 215

Query: 194 DPKSRHKGKLDTESLLQTRGVNWTALRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSG 253
              + H   +  E  L     NW + RP Y+ G  N    EEWFF R+   R +PIPGSG
Sbjct: 216 KADAGH---VVVEKYLAETFGNWASFRPQYMIGSGNNKDCEEWFFDRIVRDRAVPIPGSG 275

Query: 254 IQITSLGHVKDLADAFVRVLGN-DVASGQVYNISGDKYVTFDGLAKACAKAGGFPEPEII 313
           +Q+T++ HV+DL+      + N + ASG ++N   D+ VT DG+AK CA A G    EI+
Sbjct: 276 LQLTNISHVRDLSSMLTSAVANPEAASGNIFNCVSDRAVTLDGMAKLCAAAAG-KTVEIV 335

Query: 314 HYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYNLDFGRGTFRK 373
           HY+ K      KKAF FR+ HF+A    AK  LGW+ + +L E L + +      G  +K
Sbjct: 336 HYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLLGWESKTNLPEDLKERFEEYVKIGRDKK 395

Query: 374 AADFSTDDMIL 375
              F  DD IL
Sbjct: 396 EIKFELDDKIL 397
[Close]
BLAST of Spo25118.1 vs. TAIR (Arabidopsis)
Match: AT1G53500.1 (NAD-dependent epimerase/dehydratase family protein)

HSP 1 Score: 64.3 bits (155), Expect = 1.800e-10
Identity = 76/327 (23.24%), Postives = 127/327 (38.84%), Query Frame = 1 

		  

Query: 52  TASSAKKILIMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSS- 111
           T    K ILI G   FI   ++  L++      +    K      L     +    FSS 
Sbjct: 4   TTYKPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPS----FSSP 63

Query: 112 KIQHLKGDRQDFDFVKSSLSAEGYDVV----------------YDINGREAVEVEPILDA 171
             + +KGD    D V   L  E  D +                ++           +L+A
Sbjct: 64  NFKFVKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEA 123

Query: 172 LP---KLEQYIYCSSAGVYLKSD---LMPHCEVDAVDPKSRHKG-KLDTESLLQTRGVNW 231
                ++ ++I+ S+  VY ++D    + + E   + P + +   K   E L+   G ++
Sbjct: 124 CKVTGQIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY 183

Query: 232 ----TALRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQITSLGHVKDLADAFVR 291
                  R   +YGP  +   +   F     +G+P+PI G G  + S  + +D+A+AF  
Sbjct: 184 GLPVITTRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNVRSYLYCEDVAEAFEV 243

Query: 292 VLGNDVASGQVYNISGDKYVTFDGLAK-ACAKAGGFPEPEIIHYNQKEYDFGKKKAFPFR 349
           VL +    G VYN+   +      +A+  C   G  PE  I     +          PF 
Sbjct: 244 VL-HKGEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENR----------PFN 303
[Close]
BLAST of Spo25118.1 vs. TAIR (Arabidopsis)
Match: AT3G14790.1 (rhamnose biosynthesis 3)

HSP 1 Score: 63.5 bits (153), Expect = 3.100e-10
Identity = 74/320 (23.12%), Postives = 122/320 (38.12%), Query Frame = 1 

		  

Query: 57  KKILIMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKIQHLK 116
           K ILI G   FI   ++  LV+      +    K      L   + ++    S   + +K
Sbjct: 7   KNILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKS---SPNFKFVK 66

Query: 117 GDRQDFDFVKSSLSAEGYDVV----------------YDINGREAVEVEPILDALP---K 176
           GD    D V   L  E  D +                ++           +L+A     +
Sbjct: 67  GDIASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQ 126

Query: 177 LEQYIYCSSAGVYLKSD---LMPHCEVDAVDPKSRHKG-KLDTESLLQTRGVNW----TA 236
           + ++I+ S+  VY ++D    + + E   + P + +   K   E L+   G ++      
Sbjct: 127 IRRFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVIT 186

Query: 237 LRPVYIYGPLNY-NPVEEWFFHRLKAGRPIPIPGSGIQITSLGHVKDLADAFVRVLGNDV 296
            R   +YGP  +   +   F      G+P+PI G G  + S  + +D+A+AF  VL    
Sbjct: 187 TRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGE 246

Query: 297 ASGQVYNISGDKYVTFDGLAKACAKAGGFPEPEIIHYNQKEYDFGKKKAFPFRDQHFFAS 349
            +  VYNI   +      +A   +K  G      I Y +           PF DQ +F  
Sbjct: 247 VN-HVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENR---------PFNDQRYFLD 306
[Close]
BLAST of Spo25118.1 vs. TAIR (Arabidopsis)
Match: AT1G63180.1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3)

HSP 1 Score: 50.4 bits (119), Expect = 2.800e-6
Identity = 81/354 (22.88%), Postives = 136/354 (38.42%), Query Frame = 1 

		  

Query: 53  ASSAKKILIMGGTRFIGLFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEAEFADFSSKI 112
           +S  + IL+ GG  FIG      L+ +G +VT+       + + +    E    D S+K+
Sbjct: 3   SSVEQNILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKL 62

Query: 113 QHLKGD------------RQDFDFVK--SSLSAEGYDV-----VYDINGREAVEVEPILD 172
           +   GD             Q FD V   + L A G  V      +D N    + +   + 
Sbjct: 63  EFNLGDLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETM- 122

Query: 173 ALPKLEQYIYCSSAGVYLKSDLMP---HCEVDAVDPKSRHKGKLDTESLLQTRGVNWTAL 232
           A    +  ++ SSA VY + +++P     E+ A++P  R      T+  L+    +  A 
Sbjct: 123 AKYNCKMMVFSSSATVYGQPEIVPCVEDFELQAMNPYGR------TKLFLEEIARDIHAA 182

Query: 233 RPVYIYGPLNY-NPVEEW------------------FFHRLKAGR--PIPIPG------S 292
            P +    L Y NPV                     +  ++  GR   + + G       
Sbjct: 183 EPEWKIILLRYFNPVGAHESGRIGEDPKGIPNNLMPYIQQVAVGRLPELNVFGHDYPTMD 242

Query: 293 GIQITSLGHVKDLADAFVRVLGNDVASGQV----YNISGDKYVTFDGLAKACAKAGGFPE 352
           G  +    HV DLAD  V  L    +  ++    YN+   +  +   +  +  KA G   
Sbjct: 243 GSAVRDYIHVMDLADGHVAALNKLFSDSKIGCTAYNLGTGQGTSVLEMVSSFEKASGKKI 302

Query: 353 PEIIHYNQKEYDFGKKKAFPFRDQHFFASIEKAKKELGWKPEFDLVEGLTDSYN 354
           P  +   +     G   A        +AS +KA+KELGWK ++ + E   D +N
Sbjct: 303 PIKLCPRRA----GDATAV-------YASTQKAEKELGWKAKYGVDEMCRDQWN 338
The following BLAST results are available for this feature:
BLAST of Spo25118.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902202236|gb|KNA14214.1|2.7e-221100.hypothetical protein SOVF_1090... [more]
gi|731327506|ref|XP_010674555.1|8.7e-20491.8PREDICTED: chloroplast stem-lo... [more]
gi|747089109|ref|XP_011092178.1|2.0e-18483.8PREDICTED: chloroplast stem-lo... [more]
gi|727605393|ref|XP_010475766.1|2.9e-18382.4PREDICTED: chloroplast stem-lo... [more]
gi|727571341|ref|XP_010458216.1|1.1e-18282.1PREDICTED: chloroplast stem-lo... [more]
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BLAST of Spo25118.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R5K6_SPIOL1.9e-221100.Uncharacterized protein OS=Spi... [more]
A0A0J8CQA7_BETVU6.1e-20491.8Uncharacterized protein OS=Bet... [more]
A0A0D3C8Q5_BRAOL1.3e-18282.4Uncharacterized protein OS=Bra... [more]
A0A078E310_BRANA1.3e-18282.4BnaC05g06870D protein OS=Brass... [more]
R0GQE3_9BRAS5.0e-18281.6Uncharacterized protein OS=Cap... [more]
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BLAST of Spo25118.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CP41B_ARATH2.6e-18482.1Chloroplast stem-loop binding ... [more]
CP41A_ARATH8.5e-5033.6Chloroplast stem-loop binding ... [more]
UXS1_PONAB4.6e-1122.7UDP-glucuronic acid decarboxyl... [more]
UXS1_RAT4.6e-1122.7UDP-glucuronic acid decarboxyl... [more]
UXS1_MOUSE4.6e-1122.7UDP-glucuronic acid decarboxyl... [more]
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BLAST of Spo25118.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G09340.11.5e-18582.1chloroplast RNA binding[more]
AT3G63140.14.8e-5133.6chloroplast stem-loop binding ... [more]
AT1G53500.11.8e-1023.2NAD-dependent epimerase/dehydr... [more]
AT3G14790.13.1e-1023.1rhamnose biosynthesis 3[more]
AT1G63180.12.8e-622.8UDP-D-glucose/UDP-D-galactose ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001509NAD-dependent epimerase/dehydratase, N-terminal domainPFAMPF01370Epimerasecoord: 59..276
score: 2.0
IPR016040NAD(P)-binding domainGENE3D3.40.50.720coord: 57..239
score: 3.2
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 57..350
score: 2.31
NoneNo IPR availableGENE3D3.90.25.10coord: 240..351
score: 1.5
NoneNo IPR availablePANTHERPTHR10366NAD DEPENDENT EPIMERASE/DEHYDRATASEcoord: 58..378
score: 3.2E
NoneNo IPR availablePANTHERPTHR10366:SF289CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA B, CHLOROPLASTICcoord: 58..378
score: 3.2E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0009765 photosynthesis, light harvesting
biological_process GO:0009072 aromatic amino acid family metabolic process
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0050787 detoxification of mercury ion
biological_process GO:0080167 response to karrikin
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0009658 chloroplast organization
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0006566 threonine metabolic process
biological_process GO:0009108 coenzyme biosynthetic process
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:0032259 methylation
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0006544 glycine metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0030154 cell differentiation
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0008652 cellular amino acid biosynthetic process
biological_process GO:0006546 glycine catabolic process
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0009617 response to bacterium
biological_process GO:0006457 protein folding
biological_process GO:0009657 plastid organization
biological_process GO:0010206 photosystem II repair
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0044272 sulfur compound biosynthetic process
biological_process GO:0000096 sulfur amino acid metabolic process
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0019748 secondary metabolic process
biological_process GO:0009416 response to light stimulus
biological_process GO:0080093 regulation of photorespiration
biological_process GO:0006097 glyoxylate cycle
biological_process GO:0031998 regulation of fatty acid beta-oxidation
biological_process GO:0019643 reductive tricarboxylic acid cycle
biological_process GO:0010304 PSII associated light-harvesting complex II catabolic process
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0007031 peroxisome organization
biological_process GO:0031408 oxylipin biosynthetic process
biological_process GO:0006108 malate metabolic process
biological_process GO:0009106 lipoate metabolic process
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0042742 defense response to bacterium
biological_process GO:0050832 defense response to fungus
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0043900 regulation of multi-organism process
biological_process GO:0009595 detection of biotic stimulus
biological_process GO:0009845 seed germination
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0009909 regulation of flower development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0045727 positive regulation of translation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0009686 gibberellin biosynthetic process
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0000272 polysaccharide catabolic process
biological_process GO:0032544 plastid translation
biological_process GO:0042793 plastid transcription
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009853 photorespiration
biological_process GO:0009640 photomorphogenesis
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0005996 monosaccharide metabolic process
biological_process GO:0009933 meristem structural organization
biological_process GO:0019915 lipid storage
biological_process GO:0000165 MAPK cascade
biological_process GO:0009637 response to blue light
biological_process GO:0009611 response to wounding
biological_process GO:0010218 response to far red light
biological_process GO:0050826 response to freezing
biological_process GO:0007623 circadian rhythm
biological_process GO:0009902 chloroplast relocation
biological_process GO:0010162 seed dormancy process
biological_process GO:0009697 salicylic acid biosynthetic process
biological_process GO:0071215 cellular response to abscisic acid stimulus
biological_process GO:0042631 cellular response to water deprivation
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0010200 response to chitin
biological_process GO:0006364 rRNA processing
biological_process GO:0010114 response to red light
cellular_component GO:0010287 plastoglobule
cellular_component GO:0016020 membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005777 peroxisome
cellular_component GO:0005840 ribosome
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0048046 apoplast
cellular_component GO:0000326 protein storage vacuole
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0010319 stromule
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0005773 vacuole
cellular_component GO:0009523 photosystem II
cellular_component GO:0009522 photosystem I
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0009514 glyoxysome
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0030060 L-malate dehydrogenase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0050661 NADP binding
molecular_function GO:0008047 enzyme activator activity
molecular_function GO:0010297 heteropolysaccharide binding
molecular_function GO:0045735 nutrient reservoir activity
molecular_function GO:0005515 protein binding
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function GO:0045340 mercury ion binding
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0080101 phosphatidyl-N-dimethylethanolamine N-methyltransferase activity
molecular_function GO:0000773 phosphatidyl-N-methylethanolamine N-methyltransferase activity
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0004148 dihydrolipoyl dehydrogenase activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016152 mercury (II) reductase activity
molecular_function GO:0051082 unfolded protein binding
RNA-Seq Expression