Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGGAAGAGGAAGAGGAAGAAGAACCAGTACAACTGAAAGGTTGGCAACTTCGGCGATTAGCACAAGCACTGAAGGTTGGCCGCCGTAAAACTAGTGTAAGTCATATTCTCTTTGTCACTGAAACTATTTGTTTTCGACTCATAATCAGTGTCCAAGAGCTCCTTGCGAGATTTCATTTCTAAATACCTTGCTGAATATCAGATATAGTTGCAGATGAGTTGAGAGCAGAAACAAAATGTCGAGTGAGAATGGAAATTGTAGTAATGGTGGAAGTGTCAAACATAATTTGGCAGATATTCGGCCCAAGAAAACAAATGAGTGGTGAAATGACTGTCTTTGCAATTTGAGATTGACTGATATGATGTTGGAGTTGCCATTTTTTTTGGAATGAGCAACAACTGAGTGTTTGCTCTCTTAACTTCCATTATCCGTTGTCACAAAGTGCTTAACTACAAGCTTGCCTTTTGGAGTACACTGAGAAATATTTCCAGTAGGCGCATATACTGATGTGTTTGCAGTTTGTATGGTATATAAGTGCATTGTGCAATTATTTCGTGGAAAGGGGACCATCAGTTTGAAACAAGTCCATTTCAGTAGGATTAGGTTAAGTTGTAGAGAGAGGTGAAGTAACATGTATGTATAATGTATTACTGTATTATTTAGGTCTTGTTCATGGTGTATGTGATTTGTCATGGGGAATATAGCTTTGTATGATATTCTCAGGTCATGAATAGATGCTTTCCTATCTTTCTCGCAAACCTTCGTGGTTTCACCATTCACATAAGGTACCTCTTGCCTTGCAGATAAAAAATCTCGCAGCTGAGTTAGGTCTTGATAGAGCTGTTGTTCTCGAATTGCTGCGAGAGCCACCGCTGAATCTGTTAATGATGAGTGCTGCTTTGCCTGATAAACCAGAGCCTGCTGTCATGATTCCTGGTGCTGCAGACGTATCATCTGTTCCTTCTGAGGTGATTGCTGATTCTGCAGAATCAGACGTGTCATCTGTTTCTTTCGAGGTGATTGCTGATGCTGAAGAACCTGAACCTGTGGTCAAAACCCCCATCCATACCCTGCAAGACAGCTGGTCTTCACAAAAGAGATTGAAGAAAGTGCAAGTTGAAACTCTAGAAAATGTCTACAAGCGTACTAAGCGTCCCACGGTAAGTTTATGTCTATCTATCTATTTAGATTTTGTTCTTTGAAATACTTTCAGCATTCGACAAAGAATTTGAGTTTATAGACTGCTCATCTTTTTTTTATCATCAGATAGACATTGACATAACTAGTATTCTGCCTTTTGTTCTTTTAACATAAAAAAAATAAAAATTTTAATAACTTTCAGGAGATAATAGTTCAGATTAGTGATACCCAGTAATTCACAACTAAAAGTTCCATTAAGGTACTATAATCTCAGATAAGTTTAAGTTCAGATAAAGGCTAATAAGTTCATATTAGTTAAAAGAACAAGGCTTGAGTGTTGAAGATTGATCTTGAATTGGAGTAGTTGACATTTGATAATTCTATTATGTACAAACTATAAAGCTTTTTCTATAACTAGTGTGTACGGTGTGCATCTTATCAGTTTCTATATTATTCAGATAGGCGGTATCTAGTTCAATTGACGTGACAATTGCCAATATTCACATTAACTTTGTACCAAAAAAATCCATTGTTGATGTCCAAGGTTTTCTATTGGGAAGATTGAAACTTAATTTTGAATGTGCAGAACGCAATGGTTAGCAGCATAGTCCATGTGACAAACCTTCCTCGCAGGAGAGTTGTGAAATGGTTTGAAGACAAACGTGCTGATGAAGGAGTGCCTGCAGATCCTGCACAGCAACGCCCTTATCGAAGATCGTCTTCTGAATCTGTGTTTGCACAATAAATTTATGAGTTACATGCATAAACTTTCCTATTTTTGCTGAGAGGAACTAAGGATGTAATACACGGAGTAAAAAAAAATTAAAAATACTGTACAAAAATTCGAAGGGTGGCGGGTAAAGATGGCTGTGGGCCGGGCCCA GAGGAAGAGGAAGAGGAAGAAGAACCAGTACAACTGAAAGGTTGGCAACTTCGGCGATTAGCACAAGCACTGAAGGTTGGCCGCCGTAAAACTAGTATAAAAAATCTCGCAGCTGAGTTAGGTCTTGATAGAGCTGTTGTTCTCGAATTGCTGCGAGAGCCACCGCTGAATCTGTTAATGATGAGTGCTGCTTTGCCTGATAAACCAGAGCCTGCTGTCATGATTCCTGGTGCTGCAGACGTATCATCTGTTCCTTCTGAGGTGATTGCTGATTCTGCAGAATCAGACGTGTCATCTGTTTCTTTCGAGGTGATTGCTGATGCTGAAGAACCTGAACCTGTGGTCAAAACCCCCATCCATACCCTGCAAGACAGCTGGTCTTCACAAAAGAGATTGAAGAAAGTGCAAGTTGAAACTCTAGAAAATGTCTACAAGCGTACTAAGCGTCCCACGAACGCAATGGTTAGCAGCATAGTCCATGTGACAAACCTTCCTCGCAGGAGAGTTGTGAAATGGTTTGAAGACAAACGTGCTGATGAAGGAGTGCCTGCAGATCCTGCACAGCAACGCCCTTATCGAAGATCGTCTTCTGAATCTGTGTTTGCACAATAAATTTATGAGTTACATGCATAAACTTTCCTATTTTTGCTGAGAGGAACTAAGGATGTAATACACGGAGTAAAAAAAAATTAAAAATACTGTACAAAAATTCGAAGGGTGGCGGGTAAAGATGGCTGTGGGCCGGGCCCA GAGGAAGAGGAAGAGGAAGAAGAACCAGTACAACTGAAAGGTTGGCAACTTCGGCGATTAGCACAAGCACTGAAGGTTGGCCGCCGTAAAACTAGTATAAAAAATCTCGCAGCTGAGTTAGGTCTTGATAGAGCTGTTGTTCTCGAATTGCTGCGAGAGCCACCGCTGAATCTGTTAATGATGAGTGCTGCTTTGCCTGATAAACCAGAGCCTGCTGTCATGATTCCTGGTGCTGCAGACGTATCATCTGTTCCTTCTGAGGTGATTGCTGATTCTGCAGAATCAGACGTGTCATCTGTTTCTTTCGAGGTGATTGCTGATGCTGAAGAACCTGAACCTGTGGTCAAAACCCCCATCCATACCCTGCAAGACAGCTGGTCTTCACAAAAGAGATTGAAGAAAGTGCAAGTTGAAACTCTAGAAAATGTCTACAAGCGTACTAAGCGTCCCACGAACGCAATGGTTAGCAGCATAGTCCATGTGACAAACCTTCCTCGCAGGAGAGTTGTGAAATGGTTTGAAGACAAACGTGCTGATGAAGGAGTGCCTGCAGATCCTGCACAGCAACGCCCTTATCGAAGATCGTCTTCTGAATCTGTGTTTGCACAATAA EEEEEEEEPVQLKGWQLRRLAQALKVGRRKTSIKNLAAELGLDRAVVLELLREPPLNLLMMSAALPDKPEPAVMIPGAADVSSVPSEVIADSAESDVSSVSFEVIADAEEPEPVVKTPIHTLQDSWSSQKRLKKVQVETLENVYKRTKRPTNAMVSSIVHVTNLPRRRVVKWFEDKRADEGVPADPAQQRPYRRSSSESVFAQ Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo25003.1 vs. NCBI nr
Match: gi|902208688|gb|KNA16012.1| (hypothetical protein SOVF_093040 [Spinacia oleracea]) HSP 1 Score: 375.9 bits (964), Expect = 4.300e-101 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1
BLAST of Spo25003.1 vs. NCBI nr
Match: gi|731320152|ref|XP_010670653.1| (PREDICTED: uncharacterized protein LOC104887662 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 260.4 bits (664), Expect = 2.600e-66 Identity = 146/203 (71.92%), Postives = 165/203 (81.28%), Query Frame = 1
BLAST of Spo25003.1 vs. NCBI nr
Match: gi|296082012|emb|CBI21017.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 233.0 bits (593), Expect = 4.500e-58 Identity = 128/202 (63.37%), Postives = 155/202 (76.73%), Query Frame = 1
BLAST of Spo25003.1 vs. NCBI nr
Match: gi|731385823|ref|XP_010648647.1| (PREDICTED: retrotransposon-like protein 1 [Vitis vinifera]) HSP 1 Score: 233.0 bits (593), Expect = 4.500e-58 Identity = 128/202 (63.37%), Postives = 155/202 (76.73%), Query Frame = 1
BLAST of Spo25003.1 vs. NCBI nr
Match: gi|147867261|emb|CAN81198.1| (hypothetical protein VITISV_036369 [Vitis vinifera]) HSP 1 Score: 231.9 bits (590), Expect = 1.000e-57 Identity = 127/201 (63.18%), Postives = 154/201 (76.62%), Query Frame = 1
BLAST of Spo25003.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RB51_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_093040 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 3.000e-101 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1
BLAST of Spo25003.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CSQ8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g042870 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 1.800e-66 Identity = 146/203 (71.92%), Postives = 165/203 (81.28%), Query Frame = 1
BLAST of Spo25003.1 vs. UniProtKB/TrEMBL
Match: F6H309_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05190 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 3.200e-58 Identity = 128/202 (63.37%), Postives = 155/202 (76.73%), Query Frame = 1
BLAST of Spo25003.1 vs. UniProtKB/TrEMBL
Match: A5BIW4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036369 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 7.000e-58 Identity = 127/201 (63.18%), Postives = 154/201 (76.62%), Query Frame = 1
BLAST of Spo25003.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MBT9_GOSAR (Diencephalon/mesencephalon homeobox 1 OS=Gossypium arboreum GN=F383_15778 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.700e-51 Identity = 121/200 (60.50%), Postives = 147/200 (73.50%), Query Frame = 1
BLAST of Spo25003.1 vs. ExPASy Swiss-Prot
Match: OCP3_ARATH (Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 OS=Arabidopsis thaliana GN=OCP3 PE=1 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.000e-45 Identity = 107/183 (58.47%), Postives = 131/183 (71.58%), Query Frame = 1
BLAST of Spo25003.1 vs. TAIR (Arabidopsis)
Match: AT5G11270.1 (overexpressor of cationic peroxidase 3) HSP 1 Score: 183.7 bits (465), Expect = 1.100e-46 Identity = 107/183 (58.47%), Postives = 131/183 (71.58%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo25003.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo25003.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo25003.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo25003.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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