Spo24925 (gene)

Overview
NameSpo24925
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr1 : 30038077 .. 30039452 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGATGATCAAGCTTCTTTAACCAAACAAAAGGCCGCCGAAAGAAAGACAAGAAGGTCGAATAAGAATTCAACTCTTATTCTATCAATCATTCAATTGTAAGGGAAAAACTTTTAAGTTTTAACCATTAGAACATGCATCTCAACCCGATTCTCATTTCATTTGTAAATTGTCACAAAACTGCAACACAAATGTAAAATATTGATTCATAGGGACGAGTTACATGTTTTACGGTGGAGTAATGAGTAAACTTTGGCCGAAAAGAAAGTTAATGGTGTCGAACGAGTCTTTACCAAACCTTTTTTTGTCAAATGTTGACTTGCCATGCTAGGGAATTACCTAGGCTCAACTCTCTAGTCATGTGTCGTTCCGTAATTTCCAACATCTTATCGTGTTCATCATGTTGTTTCACGTAGTATCATGTCTCATACCAGCTTGGTTAGTGATATTTTTAACTACCCCTAGTAGTTGGACGTATCTCGAGGTTAGACGACAAACCAACTCAAATTAGCAAAAATCCAATTTGATCTCAATCTCACCTTGCTAATATTTTAGATTAGCAAATCCTCTATCTAAATTTCCAATAATCCATCACCATCTAACCAAATTTTAGTTATCTTGTTATGCTCCATCATGTTCTTTCACGTAATGATATGCATTAGACGAACCTGGCTCCTAACGAGGAATTCTTAGCCTCAAGTGATTTGTGTCCACACATATATAAGTGGGTACCAATACAAAATATGTTAGTGCCCATTACACAAAATGACTTGTATTTCTTAACAATTATGTATTTTTTGTACTGACATATTATGTGTTGATACTTAAGAAGGTTGTATTTGGATCGCTTGGCTCCATATCATAAGCCACTGTAGGTTTAGAAATCATCGCCCCTAACAACTTTCACTGTCACTAATCACTATTAGTAATACTAATATAAAAACGAGTCGACATATATCGAGGTAAGAAAGAACGACAAACCAACTCAAATTAGCAAAAATCCAATTAATCTCAATCTTACCTCACCAATATCGTTGATTAGTATATCTCCCATTCTCCCCCCTTTTAAATTTCCATTAATCCATCACCATCTAACAAACCAAACCACCCTTCCCCACATCGATCAAATACTACAAAAAAAATACAATTCCAACTTTAGAAAATAAAAAATCAGGAACACCCCCAACTGTCGTCCGAGGGAGCCGTTGAAACCTCCTACTTTCTCTCTCTCTCTCTCTCTCCTCATCTCCATTCTCCCCCCTTTCAACTGTTTGTTGCTTAACGTTTCCTCCTTCTTTCTCCCCTCTTCATTACGCTTTCTCTCTCCTCTTTCTATTAAACATTTAAACCCCTCCACCCCTAAAATTAATTAA

mRNA sequence

ATGGAAGATGATCAAGCTTCTTTAACCAAACAAAAGGCCGCCGAAAGAAAGACAAGAAGGTCGAATAAGAATTCAACTCTTATTCTATCAATCATTCAATTGAACACCCCCAACTGTCGTCCGAGGGAGCCGTTGAAACCTCCTACTTTCTCTCTCTCTCTCTCTCTCCTCATCTCCATTCTCCCCCCTTTCAACTGTTTGTTGCTTAACGTTTCCTCCTTCTTTCTCCCCTCTTCATTACGCTTTCTCTCTCCTCTTTCTATTAAACATTTAAACCCCTCCACCCCTAAAATTAATTAA

Coding sequence (CDS)

ATGGAAGATGATCAAGCTTCTTTAACCAAACAAAAGGCCGCCGAAAGAAAGACAAGAAGGTCGAATAAGAATTCAACTCTTATTCTATCAATCATTCAATTGAACACCCCCAACTGTCGTCCGAGGGAGCCGTTGAAACCTCCTACTTTCTCTCTCTCTCTCTCTCTCCTCATCTCCATTCTCCCCCCTTTCAACTGTTTGTTGCTTAACGTTTCCTCCTTCTTTCTCCCCTCTTCATTACGCTTTCTCTCTCCTCTTTCTATTAAACATTTAAACCCCTCCACCCCTAAAATTAATTAA

Protein sequence

MEDDQASLTKQKAAERKTRRSNKNSTLILSIIQLNTPNCRPREPLKPPTFSLSLSLLISILPPFNCLLLNVSSFFLPSSLRFLSPLSIKHLNPSTPKIN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24925.1Spo24925.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo24925.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24925.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24925.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24925.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005198 structural molecule activity
RNA-Seq Expression