Spo24886 (gene)

Overview
NameSpo24886
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionLETM1-like protein
LocationSpoScf_01189 : 58359 .. 63630 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAACAGAGTTTCGGGCTAAGGAAGGTTTTTGTTCTTTTTTAGAATATATTTATGAGATTTTATTTCTAAAAGCTAATCAGGTAATTTTGATTGCTTAATCCCCAGTTTTGATTTTGATGATGTTGGCCTATCTTAAAAACCAACTGTTTTATTTTAGCAACTTATTTTGGAATCTGTTTATTGTGTTGTGTTCTGTGGGTCTTCTGTAAACCCTGCTGCTTTTCAGCAGCAAGTTCTCCATGATTCTAATCTGATGGCCCAATTGTTTCAGGTATTGTTGTTTTCATAGCATAATTCTTTGATTATATAATTTCTGGATGACAAGTGGAGCCGATAGATGGTCTGTGAACAAGAGCTGCTGAAAAACAAAAGCAGCTCTGTGAACTTAGTCGTGTGTTGGCTGTTTTGGCTTCTGCATCTGTATGAAGATTCTATAAACATTTTTTTCTTCAGTCCTGTTGGATGGAATGATCTGAATTGGTACTGATCATTTTTGCATTAACTTTGCAGTTAGGTAGCAGGGAACGTGAGGAGTTCTTGAGGCATGTCAATAAAGAGGTATGCCCTGTAGAGTAGGCAGATATTTTGGATAAATGATAACTTTAACAAAAAGATCTCTTTCCTGTGATTCTTATCATAAAGGTGAAAAATCTAATTTTGGTTTTTCTTCCTCATTATTATGAGCTTTAGCATGTGAAATTTGTTGTTTCCTCCATTATTTTCTTTTAGCGGGGGAGGGTGGTTTCAACGATGGCATAAGTCCTCTTGCTCTCTCATCATTTAATGATTTCCATGGCAGAGCTGTGATATCATTTTTCTTTGGATTTCTTCATGTTTGTTTGGCTTGTTTCTGGTATCTAAATCCAATCGAAAGTTCATAGAGTTATGCTGCTCGTATTGTAATCTAATTGATGGTACTGACTTGATTGCCTATTACTATTATTAGAGGTATATAATATGGGCCTAGTTTGGGATTCATTTCTTAACTTTAATTTGGAACTTTGGCTTCTCGATGAATATGGTGATTTGACTTGACAGTTGAATTTAGTTGCCTGATTTTTTTCCAGTTATCCTAAAGAGTCTTTTGGTTTGCTGCTTTCTTATTGATACTTGAGATTCTCTTTTTCAAGTGCACACATTCACGCTGATGGTGACATGCTCCTCCATTCTGACAATCTTCCATCAAAAGAAAAGAGGAACAGGAGAATTGCTAGTAACAAAAAACGAATTATTAAATGCTTCTATTAATAGGTTTGGTGTGGCTAATCAGTTGTTCGATTGTACTTGAAACTTCTCCTAGCAAACTGAAATTGTGAAAAATTCTTGTTTTTTCCTTTTAGATAGATATATATAATACCNTGGTTGAGAAGGAGGGTACAGATGGTGAAGCAGATTCTCTGAAGGCCTATAAGGCTGCTCGAGAAGAAAGTGATCAAGCTGCTGAAGTGGATGTTGGGGACGAGGTCTCATCAGCGCTCGTAGACCGGGTGAGTCTGGTTAATCTACAGATTTATGGACCAGCTTTAGTATATAGGTGACACTTACTCATTATATTTGTCATGTTCATGCTGGTAGGTCGATGTAATGCTTCAGAAACTGGAAAAAGAAATTGATGATGTGGATGCCAAAATTAGTGATCGCTGGCAGCTTCTTGACAGGTGCAGTAGATGATAAGTTAATGCTTTAGATATAGTTTTTAACTAATAATTAAAGACGAAGATCTACTATTTAGAGTCTGCTTGCATTTGAAATAGTGTGTGCTTCTCTTTCCCCAAAGAAGACTGGGTACAATCTGCTATTAATATACTGCAATCTGTTTTTTGGGACTGTTTAAACTATACAACTACATACTAAACAGTAGACATTAGTCTCTAATCAAGGACTCGACGTCTAGCAAGTGTTTAACTGTTCTCTCGGAAATGTGACTCCGAGTAATGCACATAATCCTATTCTCAAGACAAGCTTCTTCTGAAAGTTACTCTGTAGGTGCTTAAATAGGAAAGTTTGCTATCTGTTGTAGTACTCCTCGCACGTGTGCTTAGTTAAACTAAATAGATGCTTGTGATTATTCTGTTTTCATTGACAAATTTAGGGGATAATCTGTAGAGAAGTATGAATACAAAAATATATACTCTAGGAGAGTAGGAGTGTTGTAGGACTACTAAAATTGAGACATTTTGAAGCTTAACCAAGTTCTCTTTCTAACTATTCAGGAATTAATGCTCTAATTGTGTAGGGCTTACTATGGGTACAAGGCTTTTTTTAGTGAGCTTTCTCTCTTTAAACCACCAAGACAAAAGTAAATGTTCAGAAGAGAACTTAGTTGGAGATAAAATTTGATAAAAACAAGTAATGCCTTTTCATTAGTACTGGTTGATGCCTTGAGGTTTATTTTGTTCTTAACATTCAGGAAACTACCTTGTTCTAATAATTTTCTCGCGAATGACCACTTTTGAGCACCTAAATTGACCATATTGCTTTGCTTTAGTCCTTACATATATGCAATGACAAAATAATCAATCAGTTTGGCTTAACGTGGTAAATGTAAGAAAAACTACAATAAAAGAATGATATCACGGCGAAACTGATGACTTGAACATGTGCAACTTGTACTCAAAAGATACTGCTGAGGCATTTCATCCCAAAATAAGTGGCTGGAAATCGAAAATTTCAAATGTGGAGTCTGAGAAAAACCCAAACCACTGTTTTGCAGGTATGGTGGAACCAATATGGCGTATAAACATAGATTATGTGTCTGTGAGCTATCCATTCTGTTTTTTACACAAAGCGAATCATATATGTCCTGTCAAGTTCGAAGTCTTTTACCAGTCCTGACAACTAACTCTATGCTTAGCTTTAAGATATTAAGCATGGTACTATTAGCTTACTAGTGTGGAGCTGAAGCATCCCCTGGCTTAGCAGTTCTCTCATTCCTCTTTCTTGTAGCTAACCTACTTAACAAATTAACATAGTGGACATATAAATTGGTACAATTCGTATCTTGGTCTCACAATAGGTCAGGTATTTAGGTTATTCCGAAAGGTGTTCAGTTGTTTTATACAGAAATGGCGCTGGCAGCCTGGCACCTCCTACCACTCCCCCCCCCCCTTCCCACACCCCCTGTAGATCGTCCTGATAAATTCAAGGAAAAAGAAAGCCTCTAACATTGCTATGCAAAGACTTGGCAGACATACTTTAACCAGTTACTATGCTATTCCGATTCTGAAACTACACGCTGTCACCTATTTCAACAGATTCTAAGCAAAAACTTCTGAATGTTAGGTGTTGGATGCTACTCATGACAATTATATGTATCTGTTAGGTGTAATATGTTCTATATAATCTCACATAGTTTATGTGTTGGTTTGCAATTTTCAATAATTTCACATAGTTTAGATACTTCCATACTTATACACTTTTATGGTATTAAGATTTATAATGAAAATAACTTTAAAAGTCCAATTATAAGTTTTATTAAAATATAAAAATCAAATAACCTCAACATTGTTTAATGTAAAATACCTGCTGCTACTTGCAGTTCTTTGAGCATGGAATGAGTATTCAAAGAAGAGAACTTGTCGTCAAGCTTGATGGTCATGTGCTGACCCTTAGCTTGCAAATGTATGGTTGCCGTGTTATCCAAAAGGTATTGTTGACTCGTCATTTAAGTTTTGATTTTGTGATGGGTTTCTTTGTTTTTCAGTTTTGAAATAAATTTTCTGCAGAGACTTGCTTGTTTGGAGATGTATTGACGTGACTAAAGTATTGGTTTCATACATACTTTTGTTATTCTATTTGCAATTCCATGGTTGTTTGGAAACCTAATGTGCTTCTACAAGCTGTGCTAGATCCCTTTCACGTCAATTGGTTTTTGTTGTTATGGTAAAGAATTCATATTGTATAACTGTTCCATCTTTTTGGTTTTGCTTCACTTAAATTAATTCAAACTTTGCTACTGTTCAAATTGAGTCTTGCAGCAACTTGTCTCCTGATATAGTCTAGACACTTAAACAATGGTACTGAAACATGCAATTATTCTTCTTTCCTGTCAGAGTGTCTGGTAATCACACCTATTTCCTTCAATTTTTTCCCCTAATCTAATCTAAATGCTAGTAGCTACTACGTGGAGCACATTGCATCATTGTGAGTGGTTTAATTACTATAGGTTATGCTTTTGCTAACTTCCCTCTAGACCTTTGCATGTGTTCAATTACCCAACTGTTTTGGTTACTAGTTTATGTAAATATGAACATGGCTTTTGGTGAAATGTCGTTTGATTCCACATGATTTCATTTTAACTTGGGTTTATTTCTGGTGTTTGTGATACTCCCAGCTACTAAAAACAAACACTATCTGCTATTTTTACAGTTTTTATGTAGCTTCTAAGTTTTTTTTTTAATTATTGTTGGTGATGATTATTAGTGAATTGTTATTTTGACATATTTACTTTGGAAGGTTAAAAAGTTTGTTTGTTGATTTTGAATTGATAATTTCCTGTCCCCATTATTGAGTAGATTCCTGTTATCAGTTACAGTTACTCTTTTTTCCTGTGTGTTGTTCTTGTGTTGTTGATGTTATCTTGGTTTGGTTTTCGACTGTTGCGGTCAATCGGTGAATGGTGTAATAGTAGTTTGAAGTATTAGTAAATATTTCATATATGGTTTTGAGGCTTATAAATGTGGGACAATATGAATCAATTATAAATTTATAAGTAATACTTTAGTCCTTAAGCTTAAGGTGTAAGCCATAAAGTAATCAAGTTACGGCATTGTGGTACACTTGGTGAGTTCTTGGCATTTGAGTGCAAAAGTAGATGGTAGCAGACATGAATATGAGAAGTGGTAGCAGACACGAGTTTAAGTTTGCAATCAACTAACATGTAAATTTAAATTTGTCAATTGCAGATATATTTTGGAGCGAAATGAGTTGGAATTTTACATGAAGAAAATCCAGAAGAAGGGGAATGTTGCTGTAGAATCAGATTAGGGATTTGATGTCGTAATGTTTATGTCACCTCTAGTTAAACTCCGGCTCCCAGTTTTTACCAATGCATCATTAATGTTGTAGTTAAACTATGTTTTGTTCAATGTTTGTGCTAAAAAAATTATGGAGGCTAGTACCTAGTACCAATGCATAATTAATGCTAAATAAATATACTATTTGCAGTGCGCTACCGTTAAGCGAATGCTGCGAAGAGTGTCAGAAATTTGCCTTCGAAAAACACTATTTGCAGCGCTTCTGTTCGCTGCAAATAAAAGTCCATTATTT

mRNA sequence

ATGTTAACAGAGTTTCGGGCTAAGGAAGCTGCTGAAAAACAAAAGCAGCTCTGTGAACTTAGTCGTGTGTTGGCTGTTTTGGCTTCTGCATCTTTAGGTAGCAGGGAACGTGAGGAGTTCTTGAGGCATGTCAATAAAGAGATAGATATATATAATACCNTGGTTGAGAAGGAGGGTACAGATGGTGAAGCAGATTCTCTGAAGGCCTATAAGGCTGCTCGAGAAGAAAGTGATCAAGCTGCTGAAGTGGATGTTGGGGACGAGGTCTCATCAGCGCTCGTAGACCGGGTCGATGTAATGCTTCAGAAACTGGAAAAAGAAATTGATGATGTGGATGCCAAAATTAGTGATCGCTGGCAGCTTCTTGACAGTTCTTTGAGCATGGAATGAGTATTCAAAGAAGAGAACTTGTCGTCAAGCTTGATGGTCATGTGCTGACCCTTAGCTTGCAAATGTATGGTTGCCGTGTTATCCAAAAGATATATTTTGGAGCGAAATGAGTTGGAATTTTACATGAAGAAAATCCAGAAGAAGGGGAATGTTGCTGTAGAATCAGATTAGGGATTTGATGTCGTAATGTTTATGTCACCTCTAGTTAAACTCCGGCTCCCAGTTTTTACCAATGCATCATTAATGTTGTAGTTAAACTATGTTTTGTTCAATGTTTGTGCTAAAAAAATTATGGAGGCTAGTACCTAGTACCAATGCATAATTAATGCTAAATAAATATACTATTTGCAGTGCGCTACCGTTAAGCGAATGCTGCGAAGAGTGTCAGAAATTTGCCTTCGAAAAACACTATTTGCAGCGCTTCTGTTCGCTGCAAATAAAAGTCCATTATTT

Coding sequence (CDS)

ATGTTAACAGAGTTTCGGGCTAAGGAAGCTGCTGAAAAACAAAAGCAGCTCTGTGAACTTAGTCGTGTGTTGGCTGTTTTGGCTTCTGCATCTTTAGGTAGCAGGGAACGTGAGGAGTTCTTGAGGCATGTCAATAAAGAGATAGATATATATAATACCNTGGTTGAGAAGGAGGGTACAGATGGTGAAGCAGATTCTCTGAAGGCCTATAAGGCTGCTCGAGAAGAAAGTGATCAAGCTGCTGAAGTGGATGTTGGGGACGAGGTCTCATCAGCGCTCGTAGACCGGGTCGATGTAATGCTTCAGAAACTGGAAAAAGAAATTGATGATGTGGATGCCAAAATTAGTGATCGCTGGCAGCTTCTTGACAGTTCTTTGAGCATGGAATGA

Protein sequence

MLTEFRAKEAAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKAYKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLDSSLSME
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24886.1Spo24886.1mRNA


Homology
[Close]
BLAST of Spo24886.1 vs. NCBI nr
Match: gi|731323538|ref|XP_010672485.1| (PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 167.9 bits (424), Expect = 1.100e-38
Identity = 91/112 (81.25%), Postives = 98/112 (87.50%), Query Frame = 1 

		  

Query: 12  EKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKAYK 71
           +KQ+QLCELSR LAVLAS S  SREREEFLR VNKEID+YNT VEKEGTDGEAD+LKAYK
Sbjct: 580 KKQEQLCELSRALAVLASTSSVSREREEFLRLVNKEIDLYNTMVEKEGTDGEADALKAYK 639

Query: 72  AAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           AAREESD AAEV + D+ S AL+ RVD MLQKLEKEIDDVDAKI DRWQLLD
Sbjct: 640 AAREESDHAAEVAIEDKASPALIARVDAMLQKLEKEIDDVDAKIGDRWQLLD 691
[Close]
BLAST of Spo24886.1 vs. NCBI nr
Match: gi|225434179|ref|XP_002275474.1| (PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial [Vitis vinifera])

HSP 1 Score: 167.5 bits (423), Expect = 1.500e-38
Identity = 89/114 (78.07%), Postives = 102/114 (89.47%), Query Frame = 1 

		  

Query: 10  AAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKA 69
           A EKQ+QLCELSR LAVLASAS  SREREEFLR VNKEI++YN+ VEKEGTDGE ++++A
Sbjct: 585 AVEKQEQLCELSRALAVLASASSVSREREEFLRLVNKEIELYNSMVEKEGTDGEKEAMEA 644

Query: 70  YKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           Y+AAR+ESD AA+V VGDEVSSAL+DRVD MLQ LEKEIDDVDAKI DRW+LLD
Sbjct: 645 YRAARDESDHAAKVAVGDEVSSALIDRVDAMLQNLEKEIDDVDAKIGDRWRLLD 698
[Close]
BLAST of Spo24886.1 vs. NCBI nr
Match: gi|902231057|gb|KNA22102.1| (hypothetical protein SOVF_036940 [Spinacia oleracea])

HSP 1 Score: 167.2 bits (422), Expect = 1.900e-38
Identity = 93/118 (78.81%), Postives = 104/118 (88.14%), Query Frame = 1 

		  

Query: 6   RAKEAAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEAD 65
           R K++AE++    +++R LAVLASAS  SREREEFLR VNKEID+YNT VEKEGTDGEAD
Sbjct: 546 RTKDSAEEEG---DVARALAVLASASSVSREREEFLRLVNKEIDLYNTMVEKEGTDGEAD 605

Query: 66  SLKAYKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           +LKAYKAAREESD AAEV VGD+VSSAL+DRVD MLQKLEKEIDDVDAKI DRWQLLD
Sbjct: 606 ALKAYKAAREESDHAAEVAVGDKVSSALIDRVDAMLQKLEKEIDDVDAKIGDRWQLLD 660
[Close]
BLAST of Spo24886.1 vs. NCBI nr
Match: gi|719985460|ref|XP_010251395.1| (PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial-like [Nelumbo nucifera])

HSP 1 Score: 162.2 bits (409), Expect = 6.200e-37
Identity = 87/114 (76.32%), Postives = 99/114 (86.84%), Query Frame = 1 

		  

Query: 10  AAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKA 69
           A EKQ QLCELSR LAVLASAS  SREREEFLR VNKEI++YN+ VEKEGTDGE ++ +A
Sbjct: 580 ALEKQGQLCELSRALAVLASASSVSREREEFLRMVNKEIELYNSMVEKEGTDGEEEAKRA 639

Query: 70  YKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           Y+AARE+SD AAE   GD++SSAL+DRVD MLQKLEKEIDDVDAKI DRW+LLD
Sbjct: 640 YQAAREDSDHAAERAAGDKISSALIDRVDAMLQKLEKEIDDVDAKIGDRWRLLD 693
[Close]
BLAST of Spo24886.1 vs. NCBI nr
Match: gi|703117317|ref|XP_010101351.1| (hypothetical protein L484_020366 [Morus notabilis])

HSP 1 Score: 159.1 bits (401), Expect = 5.300e-36
Identity = 85/114 (74.56%), Postives = 99/114 (86.84%), Query Frame = 1 

		  

Query: 10  AAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKA 69
           A EKQ+QLCELS  LAVLASAS  SREREEFLR VNKEI++Y++ V+KEG DGE +++KA
Sbjct: 579 ALEKQEQLCELSHALAVLASASSVSREREEFLRLVNKEIELYHSIVDKEGMDGEKNAIKA 638

Query: 70  YKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           Y+AAREE++ A+EV  GDEVSSAL+DRVD MLQ LEKEIDDVDAKI DRWQLLD
Sbjct: 639 YRAAREETENASEVAEGDEVSSALIDRVDAMLQNLEKEIDDVDAKIGDRWQLLD 692
[Close]
BLAST of Spo24886.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CP84_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g059020 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 7.900e-39
Identity = 91/112 (81.25%), Postives = 98/112 (87.50%), Query Frame = 1 

		  

Query: 12  EKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKAYK 71
           +KQ+QLCELSR LAVLAS S  SREREEFLR VNKEID+YNT VEKEGTDGEAD+LKAYK
Sbjct: 580 KKQEQLCELSRALAVLASTSSVSREREEFLRLVNKEIDLYNTMVEKEGTDGEADALKAYK 639

Query: 72  AAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           AAREESD AAEV + D+ S AL+ RVD MLQKLEKEIDDVDAKI DRWQLLD
Sbjct: 640 AAREESDHAAEVAIEDKASPALIARVDAMLQKLEKEIDDVDAKIGDRWQLLD 691
[Close]
BLAST of Spo24886.1 vs. UniProtKB/TrEMBL
Match: D7T2J4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g01070 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.000e-38
Identity = 89/114 (78.07%), Postives = 102/114 (89.47%), Query Frame = 1 

		  

Query: 10  AAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKA 69
           A EKQ+QLCELSR LAVLASAS  SREREEFLR VNKEI++YN+ VEKEGTDGE ++++A
Sbjct: 585 AVEKQEQLCELSRALAVLASASSVSREREEFLRLVNKEIELYNSMVEKEGTDGEKEAMEA 644

Query: 70  YKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           Y+AAR+ESD AA+V VGDEVSSAL+DRVD MLQ LEKEIDDVDAKI DRW+LLD
Sbjct: 645 YRAARDESDHAAKVAVGDEVSSALIDRVDAMLQNLEKEIDDVDAKIGDRWRLLD 698
[Close]
BLAST of Spo24886.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RTH6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_036940 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.400e-38
Identity = 93/118 (78.81%), Postives = 104/118 (88.14%), Query Frame = 1 

		  

Query: 6   RAKEAAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEAD 65
           R K++AE++    +++R LAVLASAS  SREREEFLR VNKEID+YNT VEKEGTDGEAD
Sbjct: 546 RTKDSAEEEG---DVARALAVLASASSVSREREEFLRLVNKEIDLYNTMVEKEGTDGEAD 605

Query: 66  SLKAYKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           +LKAYKAAREESD AAEV VGD+VSSAL+DRVD MLQKLEKEIDDVDAKI DRWQLLD
Sbjct: 606 ALKAYKAAREESDHAAEVAVGDKVSSALIDRVDAMLQKLEKEIDDVDAKIGDRWQLLD 660
[Close]
BLAST of Spo24886.1 vs. UniProtKB/TrEMBL
Match: M0SN54_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.700e-36
Identity = 85/120 (70.83%), Postives = 102/120 (85.00%), Query Frame = 1 

		  

Query: 4   EFRAKEAAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGE 63
           E  + +  EKQ+QLC++SR LAVLASAS  SRER+EFL  VNKEI++YNT +EKEGTDGE
Sbjct: 575 ELASGKTLEKQEQLCKISRALAVLASASSVSRERQEFLSLVNKEIELYNTMLEKEGTDGE 634

Query: 64  ADSLKAYKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 123
            ++ KAY+AARE+SDQAAEV   D+VSSALVDRVD MLQ+LEKEIDDVDAKI DRW++LD
Sbjct: 635 EEAKKAYRAAREKSDQAAEVAAADKVSSALVDRVDAMLQELEKEIDDVDAKIGDRWKILD 694
[Close]
BLAST of Spo24886.1 vs. UniProtKB/TrEMBL
Match: W9RFE0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020366 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.700e-36
Identity = 85/114 (74.56%), Postives = 99/114 (86.84%), Query Frame = 1 

		  

Query: 10  AAEKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKA 69
           A EKQ+QLCELS  LAVLASAS  SREREEFLR VNKEI++Y++ V+KEG DGE +++KA
Sbjct: 579 ALEKQEQLCELSHALAVLASASSVSREREEFLRLVNKEIELYHSIVDKEGMDGEKNAIKA 638

Query: 70  YKAAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           Y+AAREE++ A+EV  GDEVSSAL+DRVD MLQ LEKEIDDVDAKI DRWQLLD
Sbjct: 639 YRAAREETENASEVAEGDEVSSALIDRVDAMLQNLEKEIDDVDAKIGDRWQLLD 692
[Close]
BLAST of Spo24886.1 vs. TAIR (Arabidopsis)
Match: AT1G65540.1 (LETM1-like protein)

HSP 1 Score: 141.4 bits (355), Expect = 4.000e-34
Identity = 76/112 (67.86%), Postives = 92/112 (82.14%), Query Frame = 1 

		  

Query: 12  EKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKAYK 71
           EK +QLCELSR LAVLASAS  S EREEFL+ V KE+D+YN+ VEK GTD E D+ KAY 
Sbjct: 555 EKHEQLCELSRALAVLASASSVSMEREEFLKLVKKEVDLYNSMVEKGGTDDEEDARKAYL 614

Query: 72  AAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           AARE+SD++A+  + D+ SSAL+DRV+ MLQKLEKEIDDVD KI +RW+LLD
Sbjct: 615 AAREDSDRSAQKAIADKTSSALLDRVETMLQKLEKEIDDVDNKIGNRWRLLD 666
[Close]
BLAST of Spo24886.1 vs. TAIR (Arabidopsis)
Match: AT3G59820.2 (LETM1-like protein)

HSP 1 Score: 129.8 bits (325), Expect = 1.200e-30
Identity = 72/112 (64.29%), Postives = 85/112 (75.89%), Query Frame = 1 

		  

Query: 12  EKQKQLCELSRVLAVLASASLGSREREEFLRHVNKEIDIYNTXVEKEGTDGEADSLKAYK 71
           E+Q  LC+LSR L VLASAS   REREEFLR V KE++ YNT VE+E  DGE  ++KAYK
Sbjct: 576 EQQDDLCKLSRALGVLASASSVCREREEFLRLVKKEVEFYNTMVEREDVDGEKAAMKAYK 635

Query: 72  AAREESDQAAEVDVGDEVSSALVDRVDVMLQKLEKEIDDVDAKISDRWQLLD 124
           AAR + DQA EV   DEVSSAL+++VD ++Q LEKEIDDVD KI   WQLLD
Sbjct: 636 AARVDIDQADEVAEADEVSSALMEKVDGLIQNLEKEIDDVDIKIGKGWQLLD 687
The following BLAST results are available for this feature:
BLAST of Spo24886.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|731323538|ref|XP_010672485.1|1.1e-3881.2PREDICTED: LETM1 and EF-hand d... [more]
gi|225434179|ref|XP_002275474.1|1.5e-3878.0PREDICTED: LETM1 and EF-hand d... [more]
gi|902231057|gb|KNA22102.1|1.9e-3878.8hypothetical protein SOVF_0369... [more]
gi|719985460|ref|XP_010251395.1|6.2e-3776.3PREDICTED: LETM1 and EF-hand d... [more]
gi|703117317|ref|XP_010101351.1|5.3e-3674.5hypothetical protein L484_0203... [more]
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BLAST of Spo24886.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0J8CP84_BETVU7.9e-3981.2Uncharacterized protein OS=Bet... [more]
D7T2J4_VITVI1.0e-3878.0Putative uncharacterized prote... [more]
A0A0K9RTH6_SPIOL1.4e-3878.8Uncharacterized protein OS=Spi... [more]
M0SN54_MUSAM3.7e-3670.8Uncharacterized protein OS=Mus... [more]
W9RFE0_9ROSA3.7e-3674.5Uncharacterized protein OS=Mor... [more]
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BLAST of Spo24886.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24886.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G65540.14.0e-3467.8LETM1-like protein[more]
AT3G59820.21.2e-3064.2LETM1-like protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 94..114
scor
NoneNo IPR availablePANTHERPTHR14009LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEINcoord: 10..123
score: 2.7
NoneNo IPR availablePANTHERPTHR14009:SF12LETM1-LIKE PROTEINcoord: 10..123
score: 2.7

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009723 response to ethylene
biological_process GO:0061025 membrane fusion
biological_process GO:0019722 calcium-mediated signaling
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0000304 response to singlet oxygen
biological_process GO:0015031 protein transport
biological_process GO:0052543 callose deposition in cell wall
biological_process GO:0010582 floral meristem determinacy
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0006890 retrograde vesicle-mediated transport, Golgi to ER
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0042631 cellular response to water deprivation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0010076 maintenance of floral meristem identity
biological_process GO:0000165 MAPK cascade
biological_process GO:0009556 microsporogenesis
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0007033 vacuole organization
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0007030 Golgi organization
biological_process GO:0000902 cell morphogenesis
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0051090 regulation of DNA-binding transcription factor activity
biological_process GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0006769 nicotinamide metabolic process
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
biological_process GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter
biological_process GO:0015979 photosynthesis
biological_process GO:0046497 nicotinate nucleotide metabolic process
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0044237 cellular metabolic process
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006260 DNA replication
biological_process GO:0071897 DNA biosynthetic process
biological_process GO:0006952 defense response
biological_process GO:0071704 organic substance metabolic process
biological_process GO:0009605 response to external stimulus
biological_process GO:0010118 stomatal movement
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0007584 response to nutrient
biological_process GO:0006474 N-terminal protein amino acid acetylation
biological_process GO:0010107 potassium ion import
biological_process GO:0016049 cell growth
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0009910 negative regulation of flower development
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006816 calcium ion transport
biological_process GO:1903046 meiotic cell cycle process
biological_process GO:0006996 organelle organization
biological_process GO:0055085 transmembrane transport
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0001101 response to acid chemical
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0005983 starch catabolic process
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0046838 phosphorylated carbohydrate dephosphorylation
biological_process GO:0006486 protein glycosylation
biological_process GO:0000023 maltose metabolic process
biological_process GO:0006950 response to stress
biological_process GO:0006810 transport
biological_process GO:0048868 pollen tube development
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0008152 metabolic process
biological_process GO:0009737 response to abscisic acid
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006468 protein phosphorylation
biological_process GO:0018108 peptidyl-tyrosine phosphorylation
biological_process GO:0009966 regulation of signal transduction
biological_process GO:0009630 gravitropism
biological_process GO:0051321 meiotic cell cycle
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0017148 negative regulation of translation
biological_process GO:0048481 plant ovule development
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0006417 regulation of translation
biological_process GO:0009617 response to bacterium
biological_process GO:0080005 photosystem stoichiometry adjustment
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0010224 response to UV-B
biological_process GO:0016310 phosphorylation
biological_process GO:0010046 response to mycotoxin
biological_process GO:2000030 regulation of response to red or far red light
biological_process GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0052542 defense response by callose deposition
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0010200 response to chitin
biological_process GO:0009987 cellular process
cellular_component GO:0000814 ESCRT II complex
cellular_component GO:0031248 protein acetyltransferase complex
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0031083 BLOC-1 complex
cellular_component GO:0005730 nucleolus
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0009579 thylakoid
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005801 cis-Golgi network
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0000785 chromatin
cellular_component GO:0009536 plastid
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
cellular_component GO:0009522 photosystem I
cellular_component GO:0009507 chloroplast
cellular_component GO:0042575 DNA polymerase complex
cellular_component GO:0005829 cytosol
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000900 translation repressor activity, mRNA regulatory element binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005488 binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0050308 sugar-phosphatase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:2001070 starch binding
molecular_function GO:0008138 protein tyrosine/serine/threonine phosphatase activity
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0004721 phosphoprotein phosphatase activity
molecular_function GO:0019899 enzyme binding
molecular_function GO:0004596 peptide alpha-N-acetyltransferase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003887 DNA-directed DNA polymerase activity
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0004143 diacylglycerol kinase activity
molecular_function GO:0003951 NAD+ kinase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0005267 potassium channel activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0030170 pyridoxal phosphate binding
molecular_function GO:0016829 lyase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0004535 poly(A)-specific ribonuclease activity
molecular_function GO:0000989 transcription factor activity, transcription factor binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0008022 protein C-terminus binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0004715 non-membrane spanning protein tyrosine kinase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo091620.81Barchart | Table
Spo201870.74Barchart | Table
Spo247360.74Barchart | Table
Spo267890.74Barchart | Table
Spo149420.73Barchart | Table
Spo087250.73Barchart | Table
Spo243310.72Barchart | Table
Spo251070.72Barchart | Table
Spo054020.71Barchart | Table
Spo243690.71Barchart | Table
Spo003690.71Barchart | Table
Spo027490.71Barchart | Table
Spo057280.71Barchart | Table
Spo082450.69Barchart | Table
Spo012610.69Barchart | Table
Spo018400.69Barchart | Table
Spo005260.69Barchart | Table
Spo007480.69Barchart | Table
Spo233820.69Barchart | Table
Spo224360.69Barchart | Table
Spo161860.69Barchart | Table
Spo239350.68Barchart | Table
Spo189970.68Barchart | Table
Spo253900.68Barchart | Table
Spo226940.68Barchart | Table
Spo267680.68Barchart | Table
Spo085210.68Barchart | Table
Spo112850.68Barchart | Table
Spo139050.68Barchart | Table
Spo220280.68Barchart | Table
Spo213230.68Barchart | Table
Spo141290.68Barchart | Table
Spo246130.68Barchart | Table
Spo019250.68Barchart | Table
Spo252300.68Barchart | Table
Spo199040.68Barchart | Table
Spo129540.67Barchart | Table
Spo008780.67Barchart | Table
Spo016290.67Barchart | Table
Spo020650.67Barchart | Table
Spo041790.67Barchart | Table
Spo056210.67Barchart | Table
Spo057810.67Barchart | Table
Spo088500.67Barchart | Table
Spo097720.67Barchart | Table
Spo119180.67Barchart | Table
Spo170320.67Barchart | Table
Spo177260.67Barchart | Table
Spo201740.67Barchart | Table
Spo217310.67Barchart | Table
Spo228110.67Barchart | Table
Spo233320.67Barchart | Table
Spo002830.66Barchart | Table
Spo054440.66Barchart | Table
Spo008630.66Barchart | Table
Spo051950.66Barchart | Table
Spo051350.66Barchart | Table
Spo240400.66Barchart | Table
Spo036100.66Barchart | Table
Spo032850.66Barchart | Table
Spo025130.66Barchart | Table
Spo103160.66Barchart | Table
Spo109650.66Barchart | Table
Spo094990.66Barchart | Table
Spo114820.66Barchart | Table
Spo118660.66Barchart | Table
Spo015110.66Barchart | Table
Spo132810.66Barchart | Table
Spo090080.66Barchart | Table
Spo087550.66Barchart | Table
Spo146300.66Barchart | Table
Spo146670.66Barchart | Table
Spo086450.66Barchart | Table
Spo153170.66Barchart | Table
Spo155240.66Barchart | Table
Spo081140.66Barchart | Table
Spo162400.66Barchart | Table
Spo255730.66Barchart | Table
Spo170720.66Barchart | Table
Spo256530.66Barchart | Table
Spo192450.66Barchart | Table
Spo198360.66Barchart | Table
Spo076850.66Barchart | Table
Spo199860.66Barchart | Table
Spo257010.66Barchart | Table
Spo205440.66Barchart | Table
Spo062360.66Barchart | Table
Spo059280.66Barchart | Table
Spo135030.65Barchart | Table
Spo175680.65Barchart | Table
Spo139520.65Barchart | Table
Spo036300.65Barchart | Table
Spo142400.65Barchart | Table
Spo078920.65Barchart | Table
Spo259810.65Barchart | Table
Spo015750.65Barchart | Table
Spo056270.65Barchart | Table
Spo034420.65Barchart | Table
Spo240680.65Barchart | Table
Spo065060.65Barchart | Table
Spo169960.65Barchart | Table
Spo204970.65Barchart | Table
Spo003620.65Barchart | Table