Spo24811 (gene) | SpinachBase

Overview


Name	Spo24811
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Serine-rich protein-related
Location	chr2 : 35042109 .. 35043698 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTTCTTCTGCTGCAAGAAAATCAAGCGGACCAGTCCTAAGGTCTCACTCACCTTCAGAAAGATTCTATGGAGGTTCCAATACGTCGTCGTCTGCTTCAGCGTTTGCGTCTTCAACCTCCAGCAGCTTCACTTCTCGAAGCTATCTTCAACGCTCAGCTTCCCCCACACGCGTCAACATGTACTCCACCGGTTCGTCTCCGTCCGCAGCGGTCCGGTTCAACTCCGGTTCAATTTCACCGAACCGTTCGATTTCAACTCAATCCGTGCGACGTCAACAGGCGACGACAAGCCAGAAGAAGAGTTGTATGTGTTCGCCTACAAATCATCCTGGTTCGTTTCGGTGTAGTCTCCACAAAAATTCACCGAGCCGGAATTCGGTTCAGCCGTACCAATCGAACAGACTCTACGCTCGACGGTCCGCGATGACGAACTCGCTCGTGAGAATTGGAACTGTTGAAGGTGATTTGGTGAAACGTGCTTTGGCTGCGTTGATTCGTCCTTCGTCTCATCAACAGAAAAGAAGAGGTGATTTTCAGCCAAGGAGAAGCAGGTTATCAATGGTGTCAACAAATTGAAATTTGCAGCGAGTTAAAGTTAGGGTTAGGATTTTTTAATTTTTGATAAATTTTGGGGGAATTTTCTCAGAAAGTTCTAGGTTTCCGACGATTGGAAGAACTTCAACGATTCCGGCGGACGAAGAGAAATTTGTGTATATACTATAGTATAAGTGATACTCCGTATGACAGTATAATTACAATATGATCGAATTAAGAAACAAAAAATCTTTAAGAATTTTGGGACAGTACATAAACAGGGACTTCTTTAATTTTTTGACAAATTCCAATCCGATTCACAGCTTCAATTACCATCAATCTTCATTAGATTTTGGATTGAGAATTTTGGCTTAAGTCGGTCAGCAATTGGTGCAATTACGCCGTCGTTTAATGATTTGGATTGATATTGTGATGTGACTACGTGAGTGACGACGTTGTTCCGTCCCGTTAGACTTCTCCGTTTGCGTTGCCGTTAGCTGTCTTCACTGTTCCGTGAGGTATATATAATTTTATTATTATTATTATTATTTATTGTTGTTATTATATTTGGTATTTTTATTTATTTCTAACCTTTTTTGGGTGGGAAACTGACAGGGAATATTATGGAGTAATAGAGTATTAATGTATTATGGAGTTGGCAAATGTTGGACCTTGTACAATGGACTTTGGGACGAAATTGGGACACAGAAATAAATCAACAATGATGGTTGTCTTGATAAGGAAGGAAAAATAAAAATAAAATTCTCTACCAAAAGACAATTGATTTAAAATTTGAAGGTTATCATTAGTTCATGCTTAAATTAGCAAATGGAGGTGGAAGTGGAACATACGACATACAAGTAGATGACCTAAAGTGCAAAGTATCCCACTTGGACACTATACACCTTGATCATCTATCCAAGGCACCTGGGTTGAGTCGGATTAGTGGTAGTGTTGGATTAACTAGATTAAAAATCCTTTAAACTAAATCTAACCCGTTTAAATTAACGAGAGGAAGCGATTTTAATTACTTTCAAAGTCAATGGCCCA

mRNA sequence

ATGGCGGCTTCTTCTGCTGCAAGAAAATCAAGCGGACCAGTCCTAAGGTCTCACTCACCTTCAGAAAGATTCTATGGAGGTTCCAATACGTCGTCGTCTGCTTCAGCGTTTGCGTCTTCAACCTCCAGCAGCTTCACTTCTCGAAGCTATCTTCAACGCTCAGCTTCCCCCACACGCGTCAACATGTACTCCACCGGTTCGTCTCCGTCCGCAGCGGTCCGGTTCAACTCCGGTTCAATTTCACCGAACCGTTCGATTTCAACTCAATCCGTGCGACGTCAACAGGCGACGACAAGCCAGAAGAAGAGTTGTATGTGTTCGCCTACAAATCATCCTGGTTCGTTTCGGTGTAGTCTCCACAAAAATTCACCGAGCCGGAATTCGGTTCAGCCGTACCAATCGAACAGACTCTACGCTCGACGGTCCGCGATGACGAACTCGCTCGTGAGAATTGGAACTGTTGAAGGTGATTTGGTGAAACGTGCTTTGGCTGCGTTGATTCGTCCTTCGTCTCATCAACAGAAAAGAAGAGACTTCTCCGTTTGCGTTGCCGTTAGCTGTCTTCACTGTTCCGTGAGGGAATATTATGGAGTAATAGAGTATTAATGTATTATGGAGTTGGCAAATGTTGGACCTTGTACAATGGACTTTGGGACGAAATTGGGACACAGAAATAAATCAACAATGATGGTTGTCTTGATAAGGAAGGAAAAATAAAAATAAAATTCTCTACCAAAAGACAATTGATTTAAAATTTGAAGGTTATCATTAGTTCATGCTTAAATTAGCAAATGGAGGTGGAAGTGGAACATACGACATACAAGTAGATGACCTAAAGTGCAAAGTATCCCACTTGGACACTATACACCTTGATCATCTATCCAAGGCACCTGGGTTGAGTCGGATTAGTGGTAGTGTTGGATTAACTAGATTAAAAATCCTTTAAACTAAATCTAACCCGTTTAAATTAACGAGAGGAAGCGATTTTAATTACTTTCAAAGTCAATGGCCCA

Coding sequence (CDS)

ATGGCGGCTTCTTCTGCTGCAAGAAAATCAAGCGGACCAGTCCTAAGGTCTCACTCACCTTCAGAAAGATTCTATGGAGGTTCCAATACGTCGTCGTCTGCTTCAGCGTTTGCGTCTTCAACCTCCAGCAGCTTCACTTCTCGAAGCTATCTTCAACGCTCAGCTTCCCCCACACGCGTCAACATGTACTCCACCGGTTCGTCTCCGTCCGCAGCGGTCCGGTTCAACTCCGGTTCAATTTCACCGAACCGTTCGATTTCAACTCAATCCGTGCGACGTCAACAGGCGACGACAAGCCAGAAGAAGAGTTGTATGTGTTCGCCTACAAATCATCCTGGTTCGTTTCGGTGTAGTCTCCACAAAAATTCACCGAGCCGGAATTCGGTTCAGCCGTACCAATCGAACAGACTCTACGCTCGACGGTCCGCGATGACGAACTCGCTCGTGAGAATTGGAACTGTTGAAGGTGATTTGGTGAAACGTGCTTTGGCTGCGTTGATTCGTCCTTCGTCTCATCAACAGAAAAGAAGAGACTTCTCCGTTTGCGTTGCCGTTAGCTGTCTTCACTGTTCCGTGAGGGAATATTATGGAGTAATAGAGTATTAA

Protein sequence

MAASSAARKSSGPVLRSHSPSERFYGGSNTSSSASAFASSTSSSFTSRSYLQRSASPTRVNMYSTGSSPSAAVRFNSGSISPNRSISTQSVRRQQATTSQKKSCMCSPTNHPGSFRCSLHKNSPSRNSVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVKRALAALIRPSSHQQKRRDFSVCVAVSCLHCSVREYYGVIEY

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo24811.1	Spo24811.1	mRNA

Homology

[Close]

BLAST of Spo24811.1 vs. NCBI nr
Match: gi|902232527|gb|KNA22666.1| (hypothetical protein SOVF_031140 [Spinacia oleracea])

HSP 1 Score: 320.1 bits (819), Expect = 2.800e-84
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1


		  
Query: 1   MAASSAARKSSGPVLRSHSPSERFYGGSNTSSSASAFASSTSSSFTSRSYLQRSASPTRV 60
           MAASSAARKSSGPVLRSHSPSERFYGGSNTSSSASAFASSTSSSFTSRSYLQRSASPTRV
Sbjct: 1   MAASSAARKSSGPVLRSHSPSERFYGGSNTSSSASAFASSTSSSFTSRSYLQRSASPTRV 60

Query: 61  NMYSTGSSPSAAVRFNSGSISPNRSISTQSVRRQQATTSQKKSCMCSPTNHPGSFRCSLH 120
           NMYSTGSSPSAAVRFNSGSISPNRSISTQSVRRQQATTSQKKSCMCSPTNHPGSFRCSLH
Sbjct: 61  NMYSTGSSPSAAVRFNSGSISPNRSISTQSVRRQQATTSQKKSCMCSPTNHPGSFRCSLH 120

Query: 121 KNSPSRNSVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVKRALAALIRPSSHQQKRR 178
           KNSPSRNSVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVKRALAALIRPSSHQQKRR
Sbjct: 121 KNSPSRNSVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVKRALAALIRPSSHQQKRR 177

[Close]

BLAST of Spo24811.1 vs. NCBI nr
Match: gi|902232529|gb|KNA22668.1| (hypothetical protein SOVF_031160 [Spinacia oleracea])

HSP 1 Score: 283.9 bits (725), Expect = 2.200e-73
Identity = 162/180 (90.00%), Postives = 170/180 (94.44%), Query Frame = 1


		  
Query: 1   MAASSAARKSSGPVLRSHSPSERFYGGSNTSSSASAFASSTSSSFTSRSYLQRSASPTRV 60
           MAASSAARKSSGPVLRS SP+ RFYGGSNT SS+S FASS+SSSFTSRS+LQRSASPTRV
Sbjct: 1   MAASSAARKSSGPVLRSQSPAGRFYGGSNTLSSSSGFASSSSSSFTSRSFLQRSASPTRV 60

Query: 61  NMYSTGSSPSAAVRFNSGSISPNRSISTQSVRRQ--QATTSQKKSCMCSPTNHPGSFRCS 120
           NMYST SSPSAAVRFNSGSISP+RSISTQSVRRQ   ATT QKKSCMCSPTNHPGSFRCS
Sbjct: 61  NMYSTASSPSAAVRFNSGSISPSRSISTQSVRRQPATATTGQKKSCMCSPTNHPGSFRCS 120

Query: 121 LHKNSPSRN-SVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVKRALAALIRPSSHQQKRR 178
           LHKNSP+RN SVQPYQSNRLYARRSAMTNSLVRIGTVEGDLV+RALA+LIRPSSHQQKRR
Sbjct: 121 LHKNSPNRNVSVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVRRALASLIRPSSHQQKRR 180

[Close]

BLAST of Spo24811.1 vs. NCBI nr
Match: gi|731352973|ref|XP_010687825.1| (PREDICTED: uncharacterized protein LOC104901900 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 268.9 bits (686), Expect = 7.400e-69
Identity = 153/178 (85.96%), Postives = 163/178 (91.57%), Query Frame = 1


		  
Query: 1   MAASSAARKSSGPVLRSHSPSERFYGGSNTSSSASAFASSTSSSFTSRSYLQRSASPTRV 60
           MAASSA RKSSGPVLRS SPS RFYGGS TSS ASAFASSTSS+FTSR+++QRSASPTR+
Sbjct: 1   MAASSATRKSSGPVLRSSSPSGRFYGGSRTSS-ASAFASSTSSNFTSRTFIQRSASPTRI 60

Query: 61  NMYSTGSSPSAAVRFNSGSISPNRSISTQSVRRQQATTSQKKSCMCSPTNHPGSFRCSLH 120
           N+YSTGSS SAAVRFNSGSISPNRSIS Q VRRQ  TT QK++CMCSPTNHPGSFRCSLH
Sbjct: 61  NVYSTGSSRSAAVRFNSGSISPNRSISAQPVRRQPTTTGQKRTCMCSPTNHPGSFRCSLH 120

Query: 121 KNSPSRN-SVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVKRALAALIRPSSHQQKRR 178
           KNS +R  S QPYQSNRL+ARRSAMTNSLVRIGTVEGDLVKRALAALIRPSSHQQKRR
Sbjct: 121 KNSANRTVSAQPYQSNRLFARRSAMTNSLVRIGTVEGDLVKRALAALIRPSSHQQKRR 177

[Close]

BLAST of Spo24811.1 vs. NCBI nr
Match: gi|1021036743|gb|KZM94526.1| (hypothetical protein DCAR_017769 [Daucus carota subsp. sativus])

HSP 1 Score: 182.2 bits (461), Expect = 9.100e-43
Identity = 124/187 (66.31%), Postives = 141/187 (75.40%), Query Frame = 1


		  
Query: 1   MAASSAARKSSGPVLRSHSPSERFYGGSNTSSSASAFASSTSSSFTSRS--YLQRSASPT 60
           MAASS  R+ SGPVLRS SPS RF     +  S S+FASS+SS+F+SR   +LQRS SPT
Sbjct: 1   MAASS--RRYSGPVLRSQSPSGRFC----SPGSMSSFASSSSSAFSSRPSRFLQRSTSPT 60

Query: 61  RVNMYSTGSSPSAAVRFN-SGSISPNRSIS----TQSVRRQQ--ATTSQKK-SCMCSPTN 120
           RVN+  + SSPS++VRF+   S SP+RSIS    +Q V +    A  SQKK +CMCSPTN
Sbjct: 61  RVNLSGSSSSPSSSVRFSMDRSGSPSRSISATSRSQVVNKSSNGALRSQKKRTCMCSPTN 120

Query: 121 HPGSFRCSLHKNSPSRNSVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVKRALAALIRPS 178
           HPGSFRC LHKNSPS+     Y SNRL ARRSAMTNSLVRIGTVEGDLVKRALAALIRPS
Sbjct: 121 HPGSFRCGLHKNSPSQAGTSSYPSNRLNARRSAMTNSLVRIGTVEGDLVKRALAALIRPS 180

[Close]

BLAST of Spo24811.1 vs. NCBI nr
Match: gi|661885880|emb|CDP10497.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 180.6 bits (457), Expect = 2.600e-42
Identity = 123/191 (64.40%), Postives = 141/191 (73.82%), Query Frame = 1


		  
Query: 4   SSAARKSSGPVLRSHSPSERFYGG-----SNTSSSASAFASSTSSSFTSRS----YLQRS 63
           ++A R+SSGPVLRS SPS RFY       S +SSS+SAFASSTS+ F++RS     L RS
Sbjct: 2   AAATRRSSGPVLRSLSPSGRFYSSRTRSFSCSSSSSSAFASSTST-FSARSNPSTLLHRS 61

Query: 64  ASPTRVNMYSTGSSPSAA-VRFN-SGSISPNRSISTQSVRRQQATTSQKKSCMCSPTNHP 123
            SPTRVN+YS  S+PSAA VRF+    ISPNRSIS  + + Q    SQK++CMCSPTNHP
Sbjct: 62  TSPTRVNLYS--SAPSAATVRFSLDRPISPNRSISMVNKKNQVVQKSQKRTCMCSPTNHP 121

Query: 124 GSFRCSLHK------NSPSRNSVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVKRALAAL 178
           GSFRCSLHK      +S S     PY +NRL  RRSAMTNSLVRIGTVEGDLVKRALAAL
Sbjct: 122 GSFRCSLHKSIGHSSSSSSHTQTAPYNANRLNMRRSAMTNSLVRIGTVEGDLVKRALAAL 181

[Close]

BLAST of Spo24811.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RT05_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_031140 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 1.900e-84
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1


		  
Query: 1   MAASSAARKSSGPVLRSHSPSERFYGGSNTSSSASAFASSTSSSFTSRSYLQRSASPTRV 60
           MAASSAARKSSGPVLRSHSPSERFYGGSNTSSSASAFASSTSSSFTSRSYLQRSASPTRV
Sbjct: 1   MAASSAARKSSGPVLRSHSPSERFYGGSNTSSSASAFASSTSSSFTSRSYLQRSASPTRV 60

Query: 61  NMYSTGSSPSAAVRFNSGSISPNRSISTQSVRRQQATTSQKKSCMCSPTNHPGSFRCSLH 120
           NMYSTGSSPSAAVRFNSGSISPNRSISTQSVRRQQATTSQKKSCMCSPTNHPGSFRCSLH
Sbjct: 61  NMYSTGSSPSAAVRFNSGSISPNRSISTQSVRRQQATTSQKKSCMCSPTNHPGSFRCSLH 120

Query: 121 KNSPSRNSVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVKRALAALIRPSSHQQKRR 178
           KNSPSRNSVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVKRALAALIRPSSHQQKRR
Sbjct: 121 KNSPSRNSVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVKRALAALIRPSSHQQKRR 177

[Close]

BLAST of Spo24811.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RT92_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_031160 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.500e-73
Identity = 162/180 (90.00%), Postives = 170/180 (94.44%), Query Frame = 1


		  
Query: 1   MAASSAARKSSGPVLRSHSPSERFYGGSNTSSSASAFASSTSSSFTSRSYLQRSASPTRV 60
           MAASSAARKSSGPVLRS SP+ RFYGGSNT SS+S FASS+SSSFTSRS+LQRSASPTRV
Sbjct: 1   MAASSAARKSSGPVLRSQSPAGRFYGGSNTLSSSSGFASSSSSSFTSRSFLQRSASPTRV 60

Query: 61  NMYSTGSSPSAAVRFNSGSISPNRSISTQSVRRQ--QATTSQKKSCMCSPTNHPGSFRCS 120
           NMYST SSPSAAVRFNSGSISP+RSISTQSVRRQ   ATT QKKSCMCSPTNHPGSFRCS
Sbjct: 61  NMYSTASSPSAAVRFNSGSISPSRSISTQSVRRQPATATTGQKKSCMCSPTNHPGSFRCS 120

Query: 121 LHKNSPSRN-SVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVKRALAALIRPSSHQQKRR 178
           LHKNSP+RN SVQPYQSNRLYARRSAMTNSLVRIGTVEGDLV+RALA+LIRPSSHQQKRR
Sbjct: 121 LHKNSPNRNVSVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVRRALASLIRPSSHQQKRR 180

[Close]

BLAST of Spo24811.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EI80_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g192920 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 5.100e-69
Identity = 153/178 (85.96%), Postives = 163/178 (91.57%), Query Frame = 1


		  
Query: 1   MAASSAARKSSGPVLRSHSPSERFYGGSNTSSSASAFASSTSSSFTSRSYLQRSASPTRV 60
           MAASSA RKSSGPVLRS SPS RFYGGS TSS ASAFASSTSS+FTSR+++QRSASPTR+
Sbjct: 1   MAASSATRKSSGPVLRSSSPSGRFYGGSRTSS-ASAFASSTSSNFTSRTFIQRSASPTRI 60

Query: 61  NMYSTGSSPSAAVRFNSGSISPNRSISTQSVRRQQATTSQKKSCMCSPTNHPGSFRCSLH 120
           N+YSTGSS SAAVRFNSGSISPNRSIS Q VRRQ  TT QK++CMCSPTNHPGSFRCSLH
Sbjct: 61  NVYSTGSSRSAAVRFNSGSISPNRSISAQPVRRQPTTTGQKRTCMCSPTNHPGSFRCSLH 120

Query: 121 KNSPSRN-SVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVKRALAALIRPSSHQQKRR 178
           KNS +R  S QPYQSNRL+ARRSAMTNSLVRIGTVEGDLVKRALAALIRPSSHQQKRR
Sbjct: 121 KNSANRTVSAQPYQSNRLFARRSAMTNSLVRIGTVEGDLVKRALAALIRPSSHQQKRR 177

[Close]

BLAST of Spo24811.1 vs. UniProtKB/TrEMBL
Match: A0A161XS88_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_017769 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.300e-43
Identity = 124/187 (66.31%), Postives = 141/187 (75.40%), Query Frame = 1


		  
Query: 1   MAASSAARKSSGPVLRSHSPSERFYGGSNTSSSASAFASSTSSSFTSRS--YLQRSASPT 60
           MAASS  R+ SGPVLRS SPS RF     +  S S+FASS+SS+F+SR   +LQRS SPT
Sbjct: 1   MAASS--RRYSGPVLRSQSPSGRFC----SPGSMSSFASSSSSAFSSRPSRFLQRSTSPT 60

Query: 61  RVNMYSTGSSPSAAVRFN-SGSISPNRSIS----TQSVRRQQ--ATTSQKK-SCMCSPTN 120
           RVN+  + SSPS++VRF+   S SP+RSIS    +Q V +    A  SQKK +CMCSPTN
Sbjct: 61  RVNLSGSSSSPSSSVRFSMDRSGSPSRSISATSRSQVVNKSSNGALRSQKKRTCMCSPTN 120

Query: 121 HPGSFRCSLHKNSPSRNSVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVKRALAALIRPS 178
           HPGSFRC LHKNSPS+     Y SNRL ARRSAMTNSLVRIGTVEGDLVKRALAALIRPS
Sbjct: 121 HPGSFRCGLHKNSPSQAGTSSYPSNRLNARRSAMTNSLVRIGTVEGDLVKRALAALIRPS 180

[Close]

BLAST of Spo24811.1 vs. UniProtKB/TrEMBL
Match: A0A068UQ98_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00031243001 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.800e-42
Identity = 123/191 (64.40%), Postives = 141/191 (73.82%), Query Frame = 1


		  
Query: 4   SSAARKSSGPVLRSHSPSERFYGG-----SNTSSSASAFASSTSSSFTSRS----YLQRS 63
           ++A R+SSGPVLRS SPS RFY       S +SSS+SAFASSTS+ F++RS     L RS
Sbjct: 2   AAATRRSSGPVLRSLSPSGRFYSSRTRSFSCSSSSSSAFASSTST-FSARSNPSTLLHRS 61

Query: 64  ASPTRVNMYSTGSSPSAA-VRFN-SGSISPNRSISTQSVRRQQATTSQKKSCMCSPTNHP 123
            SPTRVN+YS  S+PSAA VRF+    ISPNRSIS  + + Q    SQK++CMCSPTNHP
Sbjct: 62  TSPTRVNLYS--SAPSAATVRFSLDRPISPNRSISMVNKKNQVVQKSQKRTCMCSPTNHP 121

Query: 124 GSFRCSLHK------NSPSRNSVQPYQSNRLYARRSAMTNSLVRIGTVEGDLVKRALAAL 178
           GSFRCSLHK      +S S     PY +NRL  RRSAMTNSLVRIGTVEGDLVKRALAAL
Sbjct: 122 GSFRCSLHKSIGHSSSSSSHTQTAPYNANRLNMRRSAMTNSLVRIGTVEGDLVKRALAAL 181

[Close]

BLAST of Spo24811.1 vs. TAIR (Arabidopsis)
Match: AT5G11090.1 (serine-rich protein-related)

HSP 1 Score: 143.3 bits (360), Expect = 1.600e-34
Identity = 106/198 (53.54%), Postives = 122/198 (61.62%), Query Frame = 1


		  
Query: 1   MAASSAARKSSGPVLRSHSPSERFYGGSNT---SSSASAFASSTSSSFTSRSYL------ 60
           M  +S+  KS+GPVLRS SPS RF GG +    SSS+SAFASSTSSSF+S S        
Sbjct: 1   MVTTSSRTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHR 60

Query: 61  --------QRSASPTRVNMYSTGS-SPSAAVRFNSGSISP-NRSISTQSVRRQQATTSQK 120
                    RSASPTRVN+Y+    S S     +S SISP N+SIS    +         
Sbjct: 61  HHESNHSHHRSASPTRVNLYTAQPMSQSFRYSLDSRSISPTNKSISVSKNQPPSHNHKIS 120

Query: 121 KSCMCSPTNHPGSFRCSLHKN--SPSRNSVQPYQSNRLYARRSAMTNSLVRIGTVEGDLV 178
           + CMCSPT HPGSFRCSLHKN  +P       Y +N L  RRSAMTNSLVRIG VEG+ V
Sbjct: 121 RRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWV 180

[Close]

BLAST of Spo24811.1 vs. TAIR (Arabidopsis)
Match: AT5G25280.1 (serine-rich protein-related)

HSP 1 Score: 131.7 bits (330), Expect = 5.000e-31
Identity = 97/199 (48.74%), Postives = 120/199 (60.30%), Query Frame = 1


		  
Query: 1   MAASSAARKSSGPVLRSHSPSERFYGG-----SNTSSSASAFASSTSSSFTSRS------ 60
           + +S   R +    LRS SPS RF G       ++S S+S FASSTSSSF+S S      
Sbjct: 3   ITSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSS 62

Query: 61  ------YLQRSASPTRVNMYSTGS-SPSAAVRFNSGSISPNRSISTQSVR--RQQATTSQ 120
                 +  RSASPTRVN++++   + S     ++ SISPNRSI+  S +          
Sbjct: 63  HNQNNHHQHRSASPTRVNLFTSAPMTQSFRYSIDNRSISPNRSIAVSSNKPSNHHKIPDS 122

Query: 121 KKSCMCSPTNHPGSFRCSLHKN--SPSRNSVQPYQSNRLYARRSAMTNSLVRIGTVEGDL 178
           ++ CMCSPT HPGSFRCSLHKN  +P       Y +N L  RRSAMTNSLVRIG VEG+ 
Sbjct: 123 RRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEW 182

[Close]

BLAST of Spo24811.1 vs. TAIR (Arabidopsis)
Match: AT5G20370.1 (serine-rich protein-related)

HSP 1 Score: 60.5 bits (145), Expect = 1.400e-9
Identity = 62/192 (32.29%), Postives = 89/192 (46.35%), Query Frame = 1


		  
Query: 5   SAARKSSGPVLRSHSPSERFYGGSNTSSSASAFASSTSSSFTSRSYLQRSASPTRVNMYS 64
           +A  +SS  VLR  S S+R +   +                    + QRS SP   N+  
Sbjct: 2   AATGRSSRSVLRPLSSSQRLHNNHH------------------HHHRQRSPSPCNKNL-- 61

Query: 65  TGSSPSAAVRFNSGSISPNRSISTQSVRRQQATTSQKKSCMCSPTNHPGSFRCSLHK--- 124
                +  ++F S    P  S+ T S   Q      K+ C+CSPT HPGSFRCS H+   
Sbjct: 62  -----NLRLKFYSPGSIPKPSVVTVSSNHQT-----KRKCLCSPTTHPGSFRCSFHRRLE 121

Query: 125 --NSPSRNSVQPYQSNR----------LYARRSAMTNSLVRIGTVEGDLVKRALAA-LIR 180
              S +  S    ++NR          L  R+ A+ NSL +IG+VE +  +R+LAA L +
Sbjct: 122 HEKSKTLASSTVKRNNRGDNTIRVNVGLNLRKLALMNSLAKIGSVEAERFRRSLAANLAK 163

The following BLAST results are available for this feature:

BLAST of Spo24811.1 vs. NCBI nr
BLAST of Spo24811.1 vs. UniProtKB/TrEMBL
BLAST of Spo24811.1 vs. ExPASy Swiss-Prot
BLAST of Spo24811.1 vs. TAIR (Arabidopsis)

BLAST of Spo24811.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902232527\|gb\|KNA22666.1\|	2.8e-84	100.	hypothetical protein SOVF_0311...	[more]
gi\|902232529\|gb\|KNA22668.1\|	2.2e-73	90.0	hypothetical protein SOVF_0311...	[more]
gi\|731352973\|ref\|XP_010687825.1\|	7.4e-69	85.9	PREDICTED: uncharacterized pro...	[more]
gi\|1021036743\|gb\|KZM94526.1\|	9.1e-43	66.3	hypothetical protein DCAR_0177...	[more]
gi\|661885880\|emb\|CDP10497.1\|	2.6e-42	64.4	unnamed protein product [Coffe...	[more]

BLAST of Spo24811.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RT05_SPIOL	1.9e-84	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9RT92_SPIOL	1.5e-73	90.0	Uncharacterized protein OS=Spi...	[more]
A0A0J8EI80_BETVU	5.1e-69	85.9	Uncharacterized protein OS=Bet...	[more]
A0A161XS88_DAUCA	6.3e-43	66.3	Uncharacterized protein OS=Dau...	[more]
A0A068UQ98_COFCA	1.8e-42	64.4	Uncharacterized protein OS=Cof...	[more]

BLAST of Spo24811.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo24811.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G11090.1	1.6e-34	53.5	serine-rich protein-related	[more]
AT5G25280.1	5.0e-31	48.7	serine-rich protein-related	[more]
AT5G20370.1	1.4e-9	32.2	serine-rich protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33132	FAMILY NOT NAMED	coord: 23..184 score: 1.2
None	No IPR available	PANTHER	PTHR33132:SF12	SUBFAMILY NOT NAMED	coord: 23..184 score: 1.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0010190	cytochrome b6f complex assembly
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0031977	thylakoid lumen
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0015035	protein disulfide oxidoreductase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo14405	0.68	Barchart \| Table
Spo26899	0.68	Barchart \| Table
Spo16640	0.66	Barchart \| Table
Spo12172	0.65	Barchart \| Table
Spo14714	0.65	Barchart \| Table