Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGACACATTTTCCTGGTGAAGCAGAAGCAGTAGCAGCAATGGATATGGATTCCTGGGCATCAAAGATTCATTCTTCTAAGCACTTTTCTTCTCATCTCAGCTCAGGTTCACTTTCTCAGTAACTTCATTTCTTTTTTCTGCAAATTAATTTGTTAATTTTGCTTGTTAATGTTATACAATTAGTGGGTTTTAGATTTTTAATTGATTTATGCAAAATTGGGGTTTGCAACTTGTTAAATTTGCTTGCTTGTAGTACATAATTAATGGGTTTTAGAATTTTATTGAAATTTTGCAGATTTAGTGATAATAATTAGTTAATTATGCTTGTTAACTGTATATAGTATGTGGGTTTTAGAAAATCTATGGAGATTACTTGGATGAATTTTCTCACTTGTCCTTTTTGTTCTTCACTATAATTTTGTTGCATTTTTTCAAGGGTTTATTTTCCTTAATTGTTACTGATTCTTTTGTGGATTATGTCAAAACCCAGAAGTTTTAAGGTAGAACTCAAGTAGAATTTGAGTTCAATAGCACAAAAAAAACAATCTTTAAGCAGCCAACAACTTGGGGGAAAGTTGATTGGAGATTTGGAGGAAAGAGGGGTCAGAGGTTTAAGGACAAACTTTTTTTGGGTGGTTTTGTTGGTCCTACATGTAAACTTTGTCTGTTCCTTGCAAAAAAGATCAAATTTTCTCTTACATTATTGAATCATTTTGTTTGTAAATTGACAGGAAATCGATTAGTGTTGGATGATTCAGAAGTAAAAGATGATGCAAGGACTTATTTCACTTGTCCATTCTGCTATGTCGATATCGAGCTGTCTGCACTTTGTGATCATCTACAAGGAGAACACTGCTTTGATGTCAAAAACGCCGTATGTTTATCTTTGTATATATACGTTCTCTTTTCTTTTCTTGATGAGTGAAGTTATATTGGCGGACAATGTCCATGTTCTACTGTCATTTCGGATTAGGAATCACCACAATGTGCTTTTGAAGTGCATTGCTTATTATGACAACTTTATTAATGTCTCATTGCCTAAAATTACCCGACAAAGGTTTCGAGTCCAAATGTTTGCTCTAATTAGTCATACAGTTCATAATTAAATTATGTACATGTGCCAAAAACAAGCATAGAATTCTTGAATGAATGAGGATAAATGTGATGTGAAAGATACCCTGAGTTGAATTGGGTCCATGAATCTAAGATATTTTTCTAGTACCATGATTAGAGTGTATCTATTTGAGATTTTCAAAAGCAATTAGTCGCATATATAAGTAGATTTTTGGTGCTTAGTTGACAATGTTGGAGAAGTTTTCAGTCAATTATACAACTTCTTTACTTAACTTCCTATCTATCCATATCCATGGTTTCAGGTTTGTCCAGTTTGTGCACTAAATTTGGGCAAAGATGTTGTCGGGCATTTCAAGACGCATCATATGAACTCAATCAAGGTAAATTAAGAACTTTAATTTGACATTTGTCATTCATCGTGTTTCCTAAACATTGGTTATGTTTCCTAATAAATTCCAATGATTCACAGACTCGGAGAAGGTCTCATAAGTCAGGATTCTGGAACTTCTATGCTGGAAGAATGATCGGTGGCATGAGTGCTAAAAATGGCATGGAAAATGTGAATGCCTTATCACCTGATCCACTTCTCTCCCCTTTTTTGTTTAGCGCACCATATTCGGAAATTAAGGATGATCAATCTCAAGATTTGTGTTCCGTTGATGATCTCCCATCCATTCCAGAGAAAGAAAGGTACATATTATACTCTAGTAGTCTAGCTTGATTGATTGGTTGCCATTTCTTATGCTTGCATAGCATGAAAACAGAGGACATGCAAAATCCTTGAGCAAAAGTGAACAAAATGTCGAATCTTTATGCATTTGAAGTTCCATGTTTGGTGTCCCATATGTTTGTCCTAGCAACGTGCAGTGCTTTCGTATGTTTAAAAAGCAAGCCATGTTTCATTATTTATTGCTCTTTATGTGTTTGTTGTGCTAAGGATAGCCATATGGTAAGAGTCATTAGACTACAATGTCATGTTTTGGCAACTTACCGTGCCCAATCAAGTTTCCAAAATGTTTTTTGCCAATTTCCTCTAGCTATTTTTCATATAGTAAAGGAAGAAGTACGTAGGCTCCGTTTGTTTCAAAGGAAAACATTTTCAAAGAAAAATAATTTTCCATGGAAACAATTTTCAAGGGAAAATAGTTTTCCTTCATTTGTTTCCATACAAGAAAAATTATAAAGAGTAAGAACATAGAAGTGGAAAATGTGGCATTACTTCTTTTCAAAAGGAAAGTTGGTTTTCCCCTGGAAAAAGTTGTTTTCCACCTTTGAAAAAATTGTTTTCCACCCTTTACAAAACAAACAAACAAACAAACAAAAGAAAATGGGAAAATCATTTTCCGAAAAGGCGTTTTCCGTCAAAACAAACGGAGCCGTAGTACTAAATATCTTCTCCTATTATGTTTGGCAGTTTAGGTACCTAGTACACTTTCAATTGGGTAAAATGTCCCTGAAATAAGCAGAGTGTAGGTTAAACTTGGTCCATATAATTTCTTAATTCTCTTATAGTGTTAGGCTCATATAGCTATTTAGCCTCACCCAATTGAAAATCCTCAAAGTGATGATGGCTTGATGATTTTGGAACTGCCTCGCACCAAGGAGACTTTGTTTCCTTTATTTGTTGAGACCCCTTGATAAGAAGCACACCGAGTTATCTTAGACTGAAGAAGAGGGGAGATATAAGCTTGAGGAGCTACTCCTTCCATCACCAATTGGTTTAATACTCTAAGTTTACAACTGAATGTTTCTAAAACAACTTGTTTCTTGGTCTTGAAAACATACATTTCGCTGTGGTCTTATAAGTAAATGTCATACATTATATTCCTACTTGAAGCAAACATATTCGAAGTCTGAATTGCTTCCCTTCGATTTATCTGTTTGCATATCCTGTTTACGTATATATGATCAATATGTATATACTCCTCACTCAACTTTGACAATGTGATGCAATAAAACTGATGTTAATCACATCTGACACAACTAACTGTGGTTATATTACTGTTTTGTTGTGGAAATGCAGCTCAAAATCATCAAAGTTGAAAGAAAGCAAAGAAAAGGAAGACTCTGAAGAACTAAGGCAGAGAGCTGCATTCTGTCAACAGTTATTTTTCTCAACCATAGTCTAAAAAAATCCCTCCTTGAAAGTCACACTGCTCAAATATGAGTATATCTTCCTGTTAAGTTATGGTAAGAGATGTAGCACGTGTTTTCAGTTGCGCGATTATCTTCCCATTTCCATCACCAAGGTCTAGCAAATTTCCACAGAAATTAAAAGTATTTATGTTATAAAAGGCAATGTATAGGATAGGTATGGTAAATTATCCAAGTGTTAGTCTGTTTAGTGTAGTGAAGATGAGCTTTATTTTGCACTTATGTAGGAAAACATTATTCTCCCCGTTTTAATGCTACGGAGTAATATTATATATATATAACATTGCCTCTGGGAAATAATTGTTTGATTAGAACTACTGGTATAAGGTCCTTTACTTGAAGTTATTAAAAGTGTTCAGGCATACTTATACACCTTT ATGCTGACACATTTTCCTGGTGAAGCAGAAGCAGTAGCAGCAATGGATATGGATTCCTGGGCATCAAAGATTCATTCTTCTAAGCACTTTTCTTCTCATCTCAGCTCAGGAAATCGATTAGTGTTGGATGATTCAGAAGTAAAAGATGATGCAAGGACTTATTTCACTTGTCCATTCTGCTATGTCGATATCGAGCTGTCTGCACTTTGTGATCATCTACAAGGAGAACACTGCTTTGATGTCAAAAACGCCGTTTGTCCAGTTTGTGCACTAAATTTGGGCAAAGATGTTGTCGGGCATTTCAAGACGCATCATATGAACTCAATCAAGACTCGGAGAAGGTCTCATAAGTCAGGATTCTGGAACTTCTATGCTGGAAGAATGATCGGTGGCATGAGTGCTAAAAATGGCATGGAAAATGTGAATGCCTTATCACCTGATCCACTTCTCTCCCCTTTTTTGTTTAGCGCACCATATTCGGAAATTAAGGATGATCAATCTCAAGATTTGTGTTCCGTTGATGATCTCCCATCCATTCCAGAGAAAGAAAGCTCAAAATCATCAAAGTTGAAAGAAAGCAAAGAAAAGGAAGACTCTGAAGAACTAAGGCAGAGAGCTGCATTCTGTCAACAGTTATTTTTCTCAACCATAGTCTAAAAAAATCCCTCCTTGAAAGTCACACTGCTCAAATATGAGTATATCTTCCTGTTAAGTTATGGTAAGAGATGTAGCACGTGTTTTCAGTTGCGCGATTATCTTCCCATTTCCATCACCAAGGTCTAGCAAATTTCCACAGAAATTAAAAGTATTTATGTTATAAAAGGCAATGTATAGGATAGGTATGGTAAATTATCCAAGTGTTAGTCTGTTTAGTGTAGTGAAGATGAGCTTTATTTTGCACTTATGTAGGAAAACATTATTCTCCCCGTTTTAATGCTACGGAGTAATATTATATATATATAACATTGCCTCTGGGAAATAATTGTTTGATTAGAACTACTGGTATAAGGTCCTTTACTTGAAGTTATTAAAAGTGTTCAGGCATACTTATACACCTTT ATGCTGACACATTTTCCTGGTGAAGCAGAAGCAGTAGCAGCAATGGATATGGATTCCTGGGCATCAAAGATTCATTCTTCTAAGCACTTTTCTTCTCATCTCAGCTCAGGAAATCGATTAGTGTTGGATGATTCAGAAGTAAAAGATGATGCAAGGACTTATTTCACTTGTCCATTCTGCTATGTCGATATCGAGCTGTCTGCACTTTGTGATCATCTACAAGGAGAACACTGCTTTGATGTCAAAAACGCCGTTTGTCCAGTTTGTGCACTAAATTTGGGCAAAGATGTTGTCGGGCATTTCAAGACGCATCATATGAACTCAATCAAGACTCGGAGAAGGTCTCATAAGTCAGGATTCTGGAACTTCTATGCTGGAAGAATGATCGGTGGCATGAGTGCTAAAAATGGCATGGAAAATGTGAATGCCTTATCACCTGATCCACTTCTCTCCCCTTTTTTGTTTAGCGCACCATATTCGGAAATTAAGGATGATCAATCTCAAGATTTGTGTTCCGTTGATGATCTCCCATCCATTCCAGAGAAAGAAAGCTCAAAATCATCAAAGTTGAAAGAAAGCAAAGAAAAGGAAGACTCTGAAGAACTAAGGCAGAGAGCTGCATTCTGTCAACAGTTATTTTTCTCAACCATAGTCTAA MLTHFPGEAEAVAAMDMDSWASKIHSSKHFSSHLSSGNRLVLDDSEVKDDARTYFTCPFCYVDIELSALCDHLQGEHCFDVKNAVCPVCALNLGKDVVGHFKTHHMNSIKTRRRSHKSGFWNFYAGRMIGGMSAKNGMENVNALSPDPLLSPFLFSAPYSEIKDDQSQDLCSVDDLPSIPEKESSKSSKLKESKEKEDSEELRQRAAFCQQLFFSTIV Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo24779.1 vs. NCBI nr
Match: gi|902198762|gb|KNA13790.1| (hypothetical protein SOVF_113600 [Spinacia oleracea]) HSP 1 Score: 415.6 bits (1067), Expect = 5.300e-113 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1
BLAST of Spo24779.1 vs. NCBI nr
Match: gi|731335749|ref|XP_010678879.1| (PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 5-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 336.3 bits (861), Expect = 4.100e-89 Identity = 164/203 (80.79%), Postives = 179/203 (88.18%), Query Frame = 1
BLAST of Spo24779.1 vs. NCBI nr
Match: gi|731424987|ref|XP_010663090.1| (PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 5 isoform X1 [Vitis vinifera]) HSP 1 Score: 191.8 bits (486), Expect = 1.200e-45 Identity = 105/204 (51.47%), Postives = 129/204 (63.24%), Query Frame = 1
BLAST of Spo24779.1 vs. NCBI nr
Match: gi|1000984874|ref|XP_015579826.1| (PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 5 [Ricinus communis]) HSP 1 Score: 189.9 bits (481), Expect = 4.700e-45 Identity = 106/219 (48.40%), Postives = 136/219 (62.10%), Query Frame = 1
BLAST of Spo24779.1 vs. NCBI nr
Match: gi|595857387|ref|XP_007210534.1| (hypothetical protein PRUPE_ppa011499mg [Prunus persica]) HSP 1 Score: 189.5 bits (480), Expect = 6.200e-45 Identity = 103/207 (49.76%), Postives = 135/207 (65.22%), Query Frame = 1
BLAST of Spo24779.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2Q8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113600 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 3.700e-113 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 1
BLAST of Spo24779.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CAS2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g118210 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 2.800e-89 Identity = 164/203 (80.79%), Postives = 179/203 (88.18%), Query Frame = 1
BLAST of Spo24779.1 vs. UniProtKB/TrEMBL
Match: M5WQZ3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011499mg PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 4.300e-45 Identity = 103/207 (49.76%), Postives = 135/207 (65.22%), Query Frame = 1
BLAST of Spo24779.1 vs. UniProtKB/TrEMBL
Match: A0A067K7K3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11399 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 3.100e-43 Identity = 101/214 (47.20%), Postives = 133/214 (62.15%), Query Frame = 1
BLAST of Spo24779.1 vs. UniProtKB/TrEMBL
Match: B9RAT7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1508600 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 9.900e-42 Identity = 98/198 (49.49%), Postives = 124/198 (62.63%), Query Frame = 1
BLAST of Spo24779.1 vs. ExPASy Swiss-Prot
Match: DI197_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana GN=DI19-7 PE=1 SV=2) HSP 1 Score: 102.4 bits (254), Expect = 6.200e-21 Identity = 70/218 (32.11%), Postives = 108/218 (49.54%), Query Frame = 1
BLAST of Spo24779.1 vs. ExPASy Swiss-Prot
Match: DI195_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Oryza sativa subsp. japonica GN=DI19-5 PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 6.200e-21 Identity = 57/169 (33.73%), Postives = 89/169 (52.66%), Query Frame = 1
BLAST of Spo24779.1 vs. ExPASy Swiss-Prot
Match: DI191_ORYSJ (Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica GN=DI19-1 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 9.000e-20 Identity = 63/223 (28.25%), Postives = 105/223 (47.09%), Query Frame = 1
BLAST of Spo24779.1 vs. ExPASy Swiss-Prot
Match: DI196_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Oryza sativa subsp. japonica GN=DI19-6 PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.500e-19 Identity = 60/177 (33.90%), Postives = 88/177 (49.72%), Query Frame = 1
BLAST of Spo24779.1 vs. ExPASy Swiss-Prot
Match: DI194_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana GN=DI19-4 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.700e-18 Identity = 63/214 (29.44%), Postives = 104/214 (48.60%), Query Frame = 1
BLAST of Spo24779.1 vs. TAIR (Arabidopsis)
Match: AT5G49230.1 (Drought-responsive family protein) HSP 1 Score: 102.4 bits (254), Expect = 3.500e-22 Identity = 70/218 (32.11%), Postives = 108/218 (49.54%), Query Frame = 1
BLAST of Spo24779.1 vs. TAIR (Arabidopsis)
Match: AT5G26990.1 (Drought-responsive family protein) HSP 1 Score: 79.7 bits (195), Expect = 2.400e-15 Identity = 67/233 (28.76%), Postives = 108/233 (46.35%), Query Frame = 1
BLAST of Spo24779.1 vs. TAIR (Arabidopsis)
Match: AT3G05700.1 (Drought-responsive family protein) HSP 1 Score: 77.8 bits (190), Expect = 9.200e-15 Identity = 64/229 (27.95%), Postives = 109/229 (47.60%), Query Frame = 1
BLAST of Spo24779.1 vs. TAIR (Arabidopsis)
Match: AT1G56280.1 (drought-induced 19) HSP 1 Score: 77.8 bits (190), Expect = 9.200e-15 Identity = 60/203 (29.56%), Postives = 100/203 (49.26%), Query Frame = 1
BLAST of Spo24779.1 vs. TAIR (Arabidopsis)
Match: AT1G02750.1 (Drought-responsive family protein) HSP 1 Score: 66.6 bits (161), Expect = 2.100e-11 Identity = 35/106 (33.02%), Postives = 55/106 (51.89%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo24779.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo24779.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo24779.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo24779.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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