Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.GCACTTCTTGTAATTCCATCGAATCACTCGCTTCAATGTCCGCCATTGAAGAAGCAATTAGGGTTTCCAATTGACTCCAACCGCCGATTTTCACTCTCCAGCAACTGTAGGAGTAATCTTATGGTTTCTAGGGCTTCATCTAACTTATTCAGCTCCAATTTCAGCTCGATTTTCTCTTTTCCGGCAAGAAATTCTTTCGTTGTGAGGTCGGAAGCGGAGGATAGCTCCGACGCTCCGGCTGAGAGTGTAGCTGTCGTTGCCGAGGAGGAATTGCCGGTGGAGTCGGAAGCCGAAGCTGAAGAAAGGCCGCCGAGGCAGCAAAGGGTCAAATTGGGAGATATAATGGGG GCACTTCTTGTAATTCCATCGAATCACTCGCTTCAATGTCCGCCATTGAAGAAGCAATTAGGGTTTCCAATTGACTCCAACCGCCGATTTTCACTCTCCAGCAACTGTAGGAGTAATCTTATGGTTTCTAGGGCTTCATCTAACTTATTCAGCTCCAATTTCAGCTCGATTTTCTCTTTTCCGGCAAGAAATTCTTTCGTTGTGAGGTCGGAAGCGGAGGATAGCTCCGACGCTCCGGCTGAGAGTGTAGCTGTCGTTGCCGAGGAGGAATTGCCGGTGGAGTCGGAAGCCGAAGCTGAAGAAAGGCCGCCGAGGCAGCAAAGGGTCAAATTGGGAGATATAATGGGG GCACTTCTTGTAATTCCATCGAATCACTCGCTTCAATGTCCGCCATTGAAGAAGCAATTAGGGTTTCCAATTGACTCCAACCGCCGATTTTCACTCTCCAGCAACTGTAGGAGTAATCTTATGGTTTCTAGGGCTTCATCTAACTTATTCAGCTCCAATTTCAGCTCGATTTTCTCTTTTCCGGCAAGAAATTCTTTCGTTGTGAGGTCGGAAGCGGAGGATAGCTCCGACGCTCCGGCTGAGAGTGTAGCTGTCGTTGCCGAGGAGGAATTGCCGGTGGAGTCGGAAGCCGAAGCTGAAGAAAGGCCGCCGAGGCAGCAAAGGGTCAAATTGGGAGATATAATGGGG ALLVIPSNHSLQCPPLKKQLGFPIDSNRRFSLSSNCRSNLMVSRASSNLFSSNFSSIFSFPARNSFVVRSEAEDSSDAPAESVAVVAEEELPVESEAEAEERPPRQQRVKLGDIMG Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo24633.1 vs. NCBI nr
Match: gi|75107094|sp|P82413.2|RK19_SPIOL (RecName: Full=50S ribosomal protein L19, chloroplastic; AltName: Full=CL19; Flags: Precursor) HSP 1 Score: 213.8 bits (543), Expect = 1.600e-52 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1
BLAST of Spo24633.1 vs. NCBI nr
Match: gi|731332290|ref|XP_010677124.1| (PREDICTED: 50S ribosomal protein L19, chloroplastic [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 142.5 bits (358), Expect = 4.600e-31 Identity = 87/120 (72.50%), Postives = 94/120 (78.33%), Query Frame = 1
BLAST of Spo24633.1 vs. NCBI nr
Match: gi|1000941993|ref|XP_015582459.1| (PREDICTED: 50S ribosomal protein L19, chloroplastic [Ricinus communis]) HSP 1 Score: 59.7 bits (143), Expect = 3.900e-6 Identity = 54/119 (45.38%), Postives = 71/119 (59.66%), Query Frame = 1
BLAST of Spo24633.1 vs. NCBI nr
Match: gi|223528581|gb|EEF30602.1| (50S ribosomal protein L19, putative [Ricinus communis]) HSP 1 Score: 59.7 bits (143), Expect = 3.900e-6 Identity = 54/119 (45.38%), Postives = 71/119 (59.66%), Query Frame = 1
BLAST of Spo24633.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QR20_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_150800 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 1.100e-52 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1
BLAST of Spo24633.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CE33_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g105130 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 3.200e-31 Identity = 87/120 (72.50%), Postives = 94/120 (78.33%), Query Frame = 1
BLAST of Spo24633.1 vs. UniProtKB/TrEMBL
Match: B9T0L9_RICCO (50S ribosomal protein L19, putative OS=Ricinus communis GN=RCOM_0192750 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.700e-6 Identity = 54/119 (45.38%), Postives = 71/119 (59.66%), Query Frame = 1
BLAST of Spo24633.1 vs. ExPASy Swiss-Prot
Match: RK19_SPIOL (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea GN=RPL19 PE=1 SV=2) HSP 1 Score: 213.8 bits (543), Expect = 1.000e-54 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo24633.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 4
BLAST of Spo24633.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 3
BLAST of Spo24633.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo24633.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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