Spo24324 (gene)

Overview
NameSpo24324
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSpoScf_00067 : 302593 .. 303654 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCAAATAAGTATAATGAGTAGAATTAGTGGTTGGTCGGTTGATAAGAATGTATATATTTGGTAGGCGGACGAAGAGTTTGTCATGAGAGATCATATATTTTCATCAAGCTAGCAGATGTAAAGCATATCAAAGCCAACTTTAATATCCTTGTAGTCGAAGCTATTCCGAAAGGTGTCAAAGAAGCCATTGGTATAATAAACATGATCATAAGAAGAGGGAAAACCAATGCAACAAATAAATCATTGAAGGAACCCTCTAGGTTTCAGGGGATAACCTACTTGTATTTATCATCAAACAACGGCTAATATCACCACTAGATTCAAACAAACGGGGGAAAATCTAAACATCACGAACAAGCATAAAACTCTAGTAGACCTGATAGAACGAGTGCCCAATCAGATCAGGCGCAAATAATGCTCCACTTGTTCATCATCCCACACATGCTAATGACCGTACGTAGTTGGGTAAATACATTTTCTCGTAACCAAAATGATTATAAAGCTACTAATAAGATACTAACATATAGTGGTAAACACCGAATACATGTATTATTGTGTACTATAGATCGCATGATCGAATCTTCCCACCTTCATTTGTAATTTGAAATTTGAGATTTGAGATTTGAGATGCCGTTGTAGTTCACTTGAACCAAACAACGACTCTTAAACTCTTTTTCGATGACCCCACCCTCACAGGCCACAGCCCAAAAAGCAGTTCGTAGAATAGAATGAACAAATCAAGTCCACTACTATTACTACAAGTACTAGTACAAATATTGAAACTGTAATAACAACAATTTCCCCAAAAAAAGCCAGGTTCCCTTTTATTCTCCCCAGCAAACGTAAAAACACGCAACAAACAGCAACAGCAACAACAACAACAACAAAAAACACACAATTTCAATTTGTTCATCTCCTCAAATCTTATTTATCTCTCTCTTCCCCTGATATTTTTGTAATCATCTCTGTATCTCTTCTCTTAACACCCAACTTTCTGGCAAAGATCGTTATCCCCACTTTCTGTCCACTCATATCCAATCCCTCTTTCAAACCCTAA

mRNA sequence

ATGGAGCAAATAAGTATAATGAGTAGAATTAGTGGTTGGTCGGTTGATAAGAATGTATATATTTGGTTCCCTTTTATTCTCCCCAGCAAACGTAAAAACACGCAACAAACAGCAACAGCAACAACAACAACAACAAAAAACACACAATTTCAATTTGTTCATCTCCTCAAATCTTATTTATCTCTCTCTTCCCCTGATATTTTTGTAATCATCTCTGTATCTCTTCTCTTAACACCCAACTTTCTGGCAAAGATCGTTATCCCCACTTTCTGTCCACTCATATCCAATCCCTCTTTCAAACCCTAA

Coding sequence (CDS)

ATGGAGCAAATAAGTATAATGAGTAGAATTAGTGGTTGGTCGGTTGATAAGAATGTATATATTTGGTTCCCTTTTATTCTCCCCAGCAAACGTAAAAACACGCAACAAACAGCAACAGCAACAACAACAACAACAAAAAACACACAATTTCAATTTGTTCATCTCCTCAAATCTTATTTATCTCTCTCTTCCCCTGATATTTTTGTAATCATCTCTGTATCTCTTCTCTTAACACCCAACTTTCTGGCAAAGATCGTTATCCCCACTTTCTGTCCACTCATATCCAATCCCTCTTTCAAACCCTAA

Protein sequence

MEQISIMSRISGWSVDKNVYIWFPFILPSKRKNTQQTATATTTTTKNTQFQFVHLLKSYLSLSSPDIFVIISVSLLLTPNFLAKIVIPTFCPLISNPSFKP
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24324.1Spo24324.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo24324.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24324.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24324.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo24324.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0006810 transport
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006364 rRNA processing
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0042793 plastid transcription
biological_process GO:0048481 plant ovule development
biological_process GO:0010207 photosystem II assembly
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009902 chloroplast relocation
biological_process GO:0006979 response to oxidative stress
biological_process GO:0030091 protein repair
biological_process GO:0006464 cellular protein modification process
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0022414 reproductive process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0033043 regulation of organelle organization
biological_process GO:0070647 protein modification by small protein conjugation or removal
biological_process GO:0009791 post-embryonic development
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0048653 anther development
biological_process GO:0006508 proteolysis
biological_process GO:0043547 positive regulation of GTPase activity
biological_process GO:0009932 cell tip growth
biological_process GO:0007015 actin filament organization
biological_process GO:0017001 antibiotic catabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0046168 glycerol-3-phosphate catabolic process
biological_process GO:0045017 glycerolipid biosynthetic process
biological_process GO:0006650 glycerophospholipid metabolic process
biological_process GO:0009407 toxin catabolic process
biological_process GO:0009723 response to ethylene
biological_process GO:0006750 glutathione biosynthetic process
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0042318 penicillin biosynthetic process
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0006768 biotin metabolic process
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006771 riboflavin metabolic process
biological_process GO:0010114 response to red light
biological_process GO:0010218 response to far red light
biological_process GO:0009637 response to blue light
biological_process GO:0009657 plastid organization
biological_process GO:0010206 photosystem II repair
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0019497 hexachlorocyclohexane metabolic process
biological_process GO:0007127 meiosis I
biological_process GO:0006310 DNA recombination
biological_process GO:0003006 developmental process involved in reproduction
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0030007 cellular potassium ion homeostasis
biological_process GO:0043090 amino acid import
biological_process GO:0031348 negative regulation of defense response
biological_process GO:0009910 negative regulation of flower development
biological_process GO:0045892 negative regulation of transcription, DNA-templated
biological_process GO:0017148 negative regulation of translation
biological_process GO:0006457 protein folding
biological_process GO:0009658 chloroplast organization
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0007059 chromosome segregation
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006417 regulation of translation
biological_process GO:0009617 response to bacterium
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0009987 cellular process
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019530 taurine metabolic process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0009651 response to salt stress
biological_process GO:0007165 signal transduction
biological_process GO:0042908 xenobiotic transport
biological_process GO:0010150 leaf senescence
biological_process GO:0051276 chromosome organization
biological_process GO:0006974 cellular response to DNA damage stimulus
biological_process GO:0009653 anatomical structure morphogenesis
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0007017 microtubule-based process
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0009414 response to water deprivation
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0009556 microsporogenesis
biological_process GO:0010053 root epidermal cell differentiation
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0006914 autophagy
biological_process GO:0048102 autophagic cell death
biological_process GO:0052543 callose deposition in cell wall
biological_process GO:0000165 MAPK cascade
biological_process GO:0010286 heat acclimation
biological_process GO:0010076 maintenance of floral meristem identity
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0044265 cellular macromolecule catabolic process
biological_process GO:0010582 floral meristem determinacy
biological_process GO:0055085 transmembrane transport
biological_process GO:0009867 jasmonic acid mediated signaling pathway
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0005622 intracellular
cellular_component GO:0009331 glycerol-3-phosphate dehydrogenase complex
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0000325 plant-type vacuole
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0005829 cytosol
cellular_component GO:0034045 phagophore assembly site membrane
cellular_component GO:0005875 microtubule associated complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0044464 cell part
cellular_component GO:0016020 membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0031977 thylakoid lumen
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009507 chloroplast
molecular_function GO:0043621 protein self-association
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0000900 translation repressor activity, mRNA regulatory element binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0020037 heme binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0004746 riboflavin synthase activity
molecular_function GO:0032440 2-alkenal reductase [NAD(P)] activity
molecular_function GO:0005096 GTPase activator activity
molecular_function GO:0008281 sulfonylurea receptor activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0004363 glutathione synthase activity
molecular_function GO:0043295 glutathione binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function GO:0003993 acid phosphatase activity
molecular_function GO:0005215 transporter activity
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0008559 xenobiotic transmembrane transporting ATPase activity
molecular_function GO:0008800 beta-lactamase activity
molecular_function GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity
molecular_function GO:0004416 hydroxyacylglutathione hydrolase activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008430 selenium binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0005094 Rho GDP-dissociation inhibitor activity
molecular_function GO:0047800 cysteamine dioxygenase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo244250.78Barchart | Table
Spo146300.75Barchart | Table
Spo089350.74Barchart | Table
Spo084070.74Barchart | Table
Spo175780.73Barchart | Table
Spo002560.73Barchart | Table
Spo095540.73Barchart | Table
Spo004980.73Barchart | Table
Spo201060.72Barchart | Table
Spo097690.72Barchart | Table
Spo041230.72Barchart | Table
Spo047190.72Barchart | Table
Spo100920.72Barchart | Table
Spo211550.72Barchart | Table
Spo211300.72Barchart | Table
Spo250080.72Barchart | Table
Spo084780.71Barchart | Table
Spo233320.71Barchart | Table
Spo168010.70Barchart | Table
Spo026650.70Barchart | Table
Spo029180.70Barchart | Table
Spo266970.70Barchart | Table
Spo139280.70Barchart | Table
Spo273640.70Barchart | Table
Spo009920.70Barchart | Table
Spo152150.70Barchart | Table
Spo096590.69Barchart | Table
Spo216600.69Barchart | Table
Spo281860.69Barchart | Table
Spo233480.69Barchart | Table
Spo194570.69Barchart | Table
Spo108350.69Barchart | Table
Spo129650.69Barchart | Table
Spo162930.69Barchart | Table
Spo175770.69Barchart | Table
Spo126090.69Barchart | Table
Spo237450.68Barchart | Table
Spo011320.68Barchart | Table
Spo012520.68Barchart | Table
Spo021060.68Barchart | Table
Spo069530.68Barchart | Table
Spo116880.68Barchart | Table
Spo123700.68Barchart | Table
Spo136910.68Barchart | Table
Spo139810.68Barchart | Table
Spo244300.68Barchart | Table
Spo251960.68Barchart | Table
Spo051250.67Barchart | Table
Spo048460.67Barchart | Table
Spo092320.67Barchart | Table
Spo234150.67Barchart | Table
Spo086540.67Barchart | Table
Spo057790.67Barchart | Table
Spo069450.66Barchart | Table
Spo061700.66Barchart | Table
Spo235310.66Barchart | Table
Spo002050.66Barchart | Table
Spo153170.66Barchart | Table
Spo129990.66Barchart | Table
Spo097980.66Barchart | Table
Spo201490.66Barchart | Table
Spo208370.66Barchart | Table
Spo224510.66Barchart | Table
Spo246750.66Barchart | Table
Spo161880.66Barchart | Table
Spo133930.66Barchart | Table
Spo104910.65Barchart | Table
Spo016280.65Barchart | Table
Spo179860.65Barchart | Table
Spo075480.65Barchart | Table
Spo019250.65Barchart | Table
Spo270810.65Barchart | Table